NetBSD port

Kevin.Buckley at ecs.vuw.ac.nz Kevin.Buckley at ecs.vuw.ac.nz
Wed Dec 16 17:07:37 CST 2009


> Ok - the code runs locally fine - but not on  'SunGridEngine'
>

Not Ok.

That summary misses the whole point of the errors I am seeing.

The code runs fine locally AND under Sun Grid Engine, if you only
spawn TWO processes but not FOUR or EIGHT.

> Wrt SGE - what does it require from MPI. Is it MPI agnostic - or does
> it need a perticular MPI to be used?

It is more the other way around.

OpenMPI has been compiled so as to be aware of SGE.

But anyroad, what are the error messages, from PETSc, telling you
is possibly going wrong here?


> BTW: what do you have for 'ldd ex19'?

$ldd ex19
ex19:
        -lc.12 => /usr/lib/libc.so.12
        -lXau.6 => /usr/pkg/lib/libXau.so.6
        -lXdmcp.6 => /usr/pkg/lib/libXdmcp.so.6
        -lX11.6 => /usr/pkg/lib/libX11.so.6
        -lltdl.3 => /usr/pkg/lib/libltdl.so.3
        -lutil.7 => /usr/lib/libutil.so.7
        -lm.0 => /usr/lib/libm.so.0
        -lpthread.0 => /usr/lib/libpthread.so.0
        -lopen-pal.0 => /usr/pkg/lib/libopen-pal.so.0
        -lopen-rte.0 => /usr/pkg/lib/libopen-rte.so.0
        -lmpi.0 => /usr/pkg/lib/libmpi.so.0
        -lmpi_f77.0 => /usr/pkg/lib/libmpi_f77.so.0
        -lstdc++.6 => /usr/lib/libstdc++.so.6
        -lgcc_s.1 => /usr/lib/libgcc_s.so.1
        -lmpi_cxx.0 => /usr/pkg/lib/libmpi_cxx.so.0

-- 
Kevin M. Buckley                                  Room:  CO327
School of Engineering and                         Phone: +64 4 463 5971
 Computer Science
Victoria University of Wellington
New Zealand




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