No subject
Barry Smith
bsmith at mcs.anl.gov
Sun Apr 9 17:39:07 CDT 2006
Yes, and eventually we'll want those variants generated automatically;
actually not that difficult. The difficulty is mostly in designing
a generator flexible enough but not so flexible it doesn't do anything :-)
Barry
From: William Gropp <gropp at mcs.anl.gov>
> At 01:10 PM 4/8/2006, Barry Smith wrote:
>
> The biggest reason we haven't added "multi-vectors" is more design
>decisions that have to be made then actual code implementation. There are
>two important design decisions:
Thanks, Barry. I agree with both of your suggestions. For the second case
(storage ordering), in the long term, I might want to allow several forms
of interlacing and padding, depending on what testing shows provides a
significant performance boost.
Bill
>I) Introduce a new class or overload Vec?
>
> 1) Introduce a Vecs class, essentially copying the interface from
> Vec and implement the methods. A Vecs is essentially a collection
> of Vec.
> Then provide methods such as
> MatMults(), MatSolves(), PCApplys(), PCSetUps(), KSPSolves() etc
>
> 2) Overload the current Vec class so that a Vec is either a "regular"
> Vec or a collection of vectors. Modify the Vec interface and methods
> as needed, then modify the MatMult() etc as needed
>
> 3) Do 1) and have it all working well and then use this to quickly
> do 2) and throw away the seperate concept of Vecs (without losing
> the fastest possible performance for a "new" Vec that has a single
> vector).
>
> The advantage of 1) is we never break the current interface. 2) has the
> advantage of not introducing a new class; and since software
> comprehension difficulty grows exponentially with the number of classes
> this is a good thing. The advantage of 3) is we get an incremental
> approach
> to 2) (incremental is often good). Disadvantage of 3) is that users have
> to live with first the Vecs interface (but on the other hand most people
> won't use Vecs anyways) and then go back to Vec.
>
> I think 3) is the correct approach.
>
>II) Default storage of "multivectors"? (note: the interfaces for Vecs will, of
> course, be data storage format neutral, but the code we actually write
> cannot be)
>
> 1) Have the Vecs be essentially an array of Vec.
>
> 2) Have a Vecs essentially be a double array where the "values" of the
> "vectors" are interlaced.
>
> The advantage of 1) is that it is easier to implement and doing things
> like deflation (removing one of the vectors in a Vec) doesn't require
> any copies of the vector data. The advantage of 2) is better performance,
> and since we are using block for better performance we should take
> advantage
> of the best possible performance.
>
> I think implementing both 1) and 2) is appropriate, starting with 1) since
> getting it completed would be faster.
>
> Barry
>
>Note: the Vecs currently in petscvec.h is just a toy and can be ignored.
>
>On Fri, 7 Apr 2006, Victor Eijkhout wrote:
>
>>The question has come up before. If all goes according to plan, then Bill
>>Gropp will hire a student for the summer to implement it. On a project
>>that I lead, and that has use for multivectors for a different purpose,
>>there is actually budget. Feel free to recommend someone to Bill if you
>>know of a good candidate. Does your former advisor have students who are
>>familiar with the matter?
>>
>>Victor.
>>
>>On Apr 7, 2006, at 1:05 PM, Richard Tran Mills wrote:
>>
>>>Hi Guys,
>>>My former Ph.D. advisor, Andreas Stathopoulos (andreas at cs.wm.edu), has
>>>released an eigensolver package, PRIMME, that he is interested in
>>>interfacing as an external package with PETSc. I told him a bit about
>>>how he could do this, but what I couldn't really answer was his
>>>questions about "multivector" support in PETSc. PRIMME implements block
>>>Davidson/Jacobi-Davidson type methods, and thus needs to do a lot of
>>>operations like sparse matrix-multivector multiplies. I haven't seen
>>>anything like this in PETSc (and since PETSc doesn't have block Krylov
>>>solvers, I suppose there is currently no need). Has anyone done any
>>>work on stuff like this, or does anyone have any plans to? Any thoughts
>>>on this?
>>>Cheers,
>>>Richard
>>
William Gropp
http://www.mcs.anl.gov/~gropp
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