trouble testing/running with gnu/5.1.0

[Wei-keng Liao]

Hi, Jim

I suspect it is caused by an old MPI.
Can you send me your config.log file?

Wei-keng

On Jul 20, 2015, at 12:36 PM, Jim Edwards wrote:

> I am getting an error when trying to build with gnu/5.1.0 
> ​the traceback looks like:
> #6  0x00000000014fb478 in ncmpii_in_swapn ()
> #7  0x00000000014cd6be in ncmpii_getput_vars ()
> #8  0x00000000014d9b64 in ncmpi_put_vara_int_all ()
> #9  0x00000000014baf57 in nfmpi_put_vara_int_all_ ()
> #10 0x00000000013f61e2 in __pionfput_mod_MOD_put_vara_1d_int ()
> 
> If I try to run the tests with this build I get a hang in the sequentiol tests:
> poe  ./nc_test -v -d       .
> 
>    2:*** Testing test_ncmpi_strerror            ...   33 good comparisons. ok
> 
>    0:*** Testing test_ncmpi_strerror            ...   33 good comparisons. ok
> 
>    1:*** Testing test_ncmpi_strerror            ...   33 good comparisons. ok
> 
>    3:*** Testing test_ncmpi_strerror            ...   33 good comparisons. ok
> 
>    0:
> 
>    1:
> 
>    2:
> 
>    2:	FAILURE at line 149 of test_read.c: remove of ./scratch.nc failed*** Testing test_ncmpi_open                ... 
> 
>    2:	### 1 FAILURES TESTING test_ncmpi_open! Stop ... ###
> 
>    0:*** TESTING C   ./nc_test for format CDF-1                         ------ failed
> 
>    0:
> 
>    0:	FAILURE at line 149 of test_read.c: remove of ./scratch.nc failed*** Testing test_ncmpi_open                ... 
> 
>    0:	### 1 FAILURES TESTING test_ncmpi_open! Stop ... ###
> 
>    0:
> 
>    0:./nc_test: expects 0 failures ... Total number of failures: 1
> 
>    1:*** TESTING C   ./nc_test for format CDF-1                         ------ failed
> 
>    1:
> 
>    1:	FAILURE at line 149 of test_read.c: remove of ./scratch.nc failed*** Testing test_ncmpi_open                ... 
> 
>    1:	### 1 FAILURES TESTING test_ncmpi_open! Stop ... ###
> 
>    1:
> 
>    1:./nc_test: expects 0 failures ... Total number of failures: 1
> 
>    2:*** TESTING C   ./nc_test for format CDF-1                         ------ failed
> 
>    2:
> 
>    2:
> 
>    2:./nc_test: expects 0 failures ... Total number of failures: 1
> 
>    3:*** Testing test_ncmpi_open                ...    5 good comparisons. ok
> 
> and the parallel test fail in the build step with:
> 
> glade/apps/opt/modulefiles/ys/cmpwrappers/mpif90 -c -g  -O0 -I../../src/lib  -I../../src/libf -I../../src/libf90  mcoll_testf.f90
> 
> mcoll_testf.f90:257:22:
> 
> 
> 
>          t1 = MPI_Wtime ( )
> 
>                       1
> 
> Error: Name 'mpi_wtime' at (1) is an ambiguous reference to 'mpi_wtime' from module 'mpi_constants'
> 
> mcoll_testf.f90:292:22:
> 
> 
> 
>          t2 = MPI_Wtime ( )
> 
>                       1
> 
> Error: Name 'mpi_wtime' at (1) is an ambiguous reference to 'mpi_wtime' from module 'mpi_constants'
> 
> mcoll_testf.f90:313:20:
> 
> 
> 
>        t3 = MPI_Wtime ( )
> 
>                     1
> 
> Error: Name 'mpi_wtime' at (1) is an ambiguous reference to 'mpi_wtime' from module 'mpi_constants'
> 
> All with svn revision 2056​
> 
> 
> 
> -- 
> Jim Edwards
> 
> CESM Software Engineer
> National Center for Atmospheric Research
> Boulder, CO