Make installation error

[Shawn Kim]

Hi, Wei-keng

I set environment variables:

setenv CC     gcc
setenv CXX    g++
setenv FC     gfortran
setenv F90    gfortran
setenv MPICC  mpicc
setenv MPICXX mpicxx
setenv MPIF77 mpif77
setenv MPIF90 mpif90
setenv CFLAGS "-g"
setenv FFLAGS "-g"

I also check the /tmp which has enough space, and time skew mentioned in the
previous thread. Both are fine. The new error message is same except time
skew. What else do I have to do?

Thank you

On Wed, Jan 20, 2010 at 11:52 PM, Wei-keng Liao <wkliao at ece.northwestern.edu
> wrote:

> Hi, Shawn,
>
> I notice another problem: mpif77 was used to compile pnetcdf.F90.
>
> Did you set the environment variables F90 and MPIF90 to the
> MPI Fortran 90 compiler, such as mpif90, when you ran configure?
>
> Wei-keng
>
>
> On Jan 20, 2010, at 10:30 PM, Jim Edwards wrote:
>
>  I see two problems - the first is that it looks like there is a time skew
>> between your os and the filesystem - try using a different filesystem or a
>> different make tool.   The second is that your /tmp is running out of space
>> - look in your compiler documentation to see how to change the directory it
>> uses for temporary files.
>>
>>
>>
>>
>>
>> On Wed, Jan 20, 2010 at 9:18 PM, Shawn Kim <shawn.subscribe at gmail.com>
>> wrote:
>> Hi,
>>
>> I am currently using mpich2-1.2 + pvfs-2.8.1 and trying to install
>> pnetcdf-1.1.0.
>> I modified rules.make in pnetcdf-1.1.0 and Makefile in
>> pnetcdf-1.1.0/src/libf. But I didn't add new functions because our cluster
>> doesn't support svn yet.
>>
>> When "make install", the error occurred:
>>
>> $ make install
>> make[1]: Entering directory
>> `/home/mdl/seokim/io_newest/test/parallel-netcdf-1.1.0'
>>
>> Making `install' in directory
>> /home/mdl/seokim/io_newest/test/parallel-netcdf-1.1.0/src
>>
>> make[2]: Entering directory
>> `/home/mdl/seokim/io_newest/test/parallel-netcdf-1.1.0/src'
>> cd lib && make install
>> make[3]: Entering directory
>> `/home/mdl/seokim/io_newest/test/parallel-netcdf-1.1.0/src/lib'
>> /usr/bin/install -c -d -m 755
>> /home/mdl/seokim/io_newest/test/parallel-netcdf-1.1.0/install/lib
>> /usr/bin/install -c -m 644 libpnetcdf.a
>> /home/mdl/seokim/io_newest/test/parallel-netcdf-1.1.0/install/lib/libpnetcdf.a
>> /usr/bin/install -c -d -m 755
>> /home/mdl/seokim/io_newest/test/parallel-netcdf-1.1.0/install/include
>> /usr/bin/install -c -m 644 ./pnetcdf.h
>> /home/mdl/seokim/io_newest/test/parallel-netcdf-1.1.0/install/include/pnetcdf.h
>> /usr/bin/install -c -d -m 755
>> /home/mdl/seokim/io_newest/test/parallel-netcdf-1.1.0/install/man/man3
>> /usr/bin/install -c -m 644 pnetcdf.3
>> /home/mdl/seokim/io_newest/test/parallel-netcdf-1.1.0/install/man/man3/pnetcdf.3
>> /usr/bin/install -c -d
>> /home/mdl/seokim/io_newest/test/parallel-netcdf-1.1.0/install/bin
>> /usr/bin/install -c -m 755 ncvalid
>> /home/mdl/seokim/io_newest/test/parallel-netcdf-1.1.0/install/bin/ncvalid
>> make[3]: Leaving directory
>> `/home/mdl/seokim/io_newest/test/parallel-netcdf-1.1.0/src/lib'
>> if [ yes = yes ] ; then cd libf && make install ; fi
>> make[3]: Entering directory
>> `/home/mdl/seokim/io_newest/test/parallel-netcdf-1.1.0/src/libf'
>> make[3]: Warning: File
>> `/home/mdl/seokim/io_newest/test/parallel-netcdf-1.1.0/install/include' has
>> modification time 4.4 s in the future
>> /bin/rm -f pnetcdf.F90
>> echo "module pnetcdf" > pnetcdf.F90
>> /bin/cat pnetcdf.inc >> pnetcdf.F90
>> /home/mdl/seokim/io_newest/mpich2-1.2.1/bin/mpif77 -c -g -I. -I./../lib
>> -I../lib   -c pnetcdf.F90
>> Error: Unexpected end of file in '/tmp/ccFpAkMf.f95'
>> make[3]: *** [pnetcdf.mod] Error 1
>> make[3]: Leaving directory
>> `/home/mdl/seokim/io_newest/test/parallel-netcdf-1.1.0/src/libf'
>> make[2]: *** [install] Error 2
>> make[2]: Leaving directory
>> `/home/mdl/seokim/io_newest/test/parallel-netcdf-1.1.0/src'
>> make[1]: *** [subdir_target] Error 1
>> make[1]: Leaving directory
>> `/home/mdl/seokim/io_newest/test/parallel-netcdf-1.1.0'
>> make: *** [src/lib/install] Error 2
>>
>> Is there anybody who faced with this kind of problem and solved it?
>> Could you give me any suggestion?
>>
>>
>>
>
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