Having a compile issue
Joe Buck
jbbuck at gmail.com
Tue Dec 8 00:40:45 CST 2009
I have checked revision 721 out via git. I'm running configure with the
--with-mpi flag and with a --prefix path specified. I'm seeing a "make
tests" failure in the "fandc" test directory.
I'm attaching the output of "configure" , "make" and "make test".
One note, it seems like the configure script doesn't pick up my
environmental setting of $FC as it does not show up in macros.make file. I
had to manually add it.
Any advice would be appreciated. Thanks in advance,
-Joe Buck
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checking for top-level source-directory... /git/parallel-netcdf
checking for gcc... gcc
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables...
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking how to run the C preprocessor... gcc -E
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for ANSI C header files... yes
checking for a BSD-compatible install... /usr/bin/install -c
checking for bison... bison -y
checking for flex... flex
checking lex output file root... lex.yy
checking lex library... -lfl
checking whether yytext is a pointer... yes
configure: checking for m4 preprocessor...
checking for m4... m4
checking m4 flags... -B10000
checking for gcc... (cached) gcc
checking whether we are using the GNU C compiler... (cached) yes
checking whether gcc accepts -g... (cached) yes
checking for gcc option to accept ISO C89... (cached) none needed
checking user-defined Fortran-77 compiler "/usr/bin/gfortran"... works
checking for Fortran .F compiler...
checking if Fortran-77 compiler handles *.F files... yes
checking how to make dependencies... false
configure: checking for nm utility...
checking for nm... nm
checking nm flags...
checking for C-equivalent to Fortran routine "SUB"... sub_
configure: checking for math library...
checking for tanh in -lc... no
checking for tanh in -lm... yes
configure: checking for ar utility...
checking for ar... ar
checking ar flags... cru
configure: checking for nm utility...
checking for nm... (cached) nm
checking nm flags...
checking for ranlib... ranlib
checking for C-equivalent to Fortran routine "SUB_A"... sub_a_
checking MPI-IO support in MPI implementation... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for stdlib.h... (cached) yes
checking for sys/types.h... (cached) yes
checking for strerror... yes
checking for working alloca.h... yes
checking for alloca... yes
checking for struct stat.st_blksize... yes
checking for IEEE floating point format... yes
checking for size_t... yes
checking if MPI_Offset is size 8... yes
checking for MPI_Request_get_status... yes
checking for MPI_Type_dup... yes
checking for MPI_Info_dup... yes
checking if MPI includes MPI_COMBINER_DUP... yes
checking if MPI includes MPI_COMBINER_HVECTOR_INTEGER... yes
checking if MPI includes MPI_COMBINER_HINDEXED_INTEGER... yes
checking if MPI includes MPI_COMBINER_SUBARRAY... yes
checking if MPI includes MPI_COMBINER_DARRAY... yes
checking if MPI includes MPI_COMBINER_RESIZED... yes
checking if MPI includes MPI_COMBINER_STRUCT_INTEGER... yes
checking if MPI includes MPI_COMBINER_INDEXED_BLOCK... yes
checking if MPI includes MPI_COMBINER_F90_REAL... yes
checking if MPI includes MPI_COMBINER_F90_INTEGER... yes
checking if MPI includes MPI_COMBINER_F90_COMPLEX... yes
checking if MPI includes MPI_CHARACTER... yes
checking if MPI includes MPI_REAL... yes
checking if MPI includes MPI_INTEGER... yes
checking if MPI includes MPI_DOUBLE_PRECISION... yes
checking if MPI includes MPI_INTEGER1... yes
checking if MPI includes MPI_INTEGER2... yes
checking if MPI includes MPI_INTEGER4... yes
checking if MPI includes MPI_INTEGER8... yes
checking if MPI includes MPI_INTEGER16... yes
checking if MPI includes MPI_REAL4... yes
checking if MPI includes MPI_REAL8... yes
checking if MPI includes MPI_REAL16... yes
checking if MPI includes MPI_COMPLEX8... yes
checking if MPI includes MPI_COMPLEX16... yes
checking if MPI includes MPI_COMPLEX32... yes
checking if MPI includes MPI_UB... yes
checking if MPI includes MPI_LB... yes
checking for off_t... yes
checking for ssize_t... yes
checking for ptrdiff_t... yes
checking for uchar... no
checking whether char is unsigned... no
checking whether byte ordering is bigendian... no
checking size of short... 2
checking size of int... 4
checking size of long... 8
checking size of float... 4
checking size of double... 8
checking size of size_t... 8
checking sizeof MPI_Offset... (cached) 8
checking for Fortran "byte"... yes
checking for Fortran "integer*2"... yes
checking if Fortran "byte" is C "signed char"... yes
checking if Fortran "byte" is C "short"... no
checking if Fortran "byte" is C "int"... no
checking if Fortran "byte" is C "long"... no
checking if Fortran "integer*2" is C "short"... yes
checking if Fortran "integer*2" is C "int"... no
checking if Fortran "integer*2" is C "long"... no
checking if Fortran "integer" is C "int"... yes
checking if Fortran "real" is C "float"... yes
checking if Fortran "doubleprecision" is C "double"... yes
checking for Fortran-equivalent to netCDF "byte"... byte
checking for Fortran-equivalent to netCDF "short"... integer*2
checking for Fortran "integer*8"... yes
checking for manual-page index command...
checking for special C compiler options needed for large files... no
checking for _FILE_OFFSET_BITS value needed for large files... no
checking for library containing MPI_File_sync... none required
checking size of off_t... 8
configure: creating ./config.status
config.status: creating macros.make
config.status: creating Makefile
config.status: creating src/Makefile
config.status: creating test/Makefile
config.status: creating src/lib/Makefile
config.status: creating src/libf/Makefile
config.status: creating test/common/Makefile
config.status: creating test/test_double/Makefile
config.status: creating test/test_double_int/Makefile
config.status: creating test/test_float/Makefile
config.status: creating test/test_int/Makefile
config.status: creating test/test_dtype/Makefile
config.status: creating test/nc_test/Makefile
config.status: creating test/nf_test/Makefile
config.status: creating test/fandc/Makefile
config.status: creating src/utils/Makefile
config.status: creating src/utils/ncdump/Makefile
config.status: creating src/utils/ncgen/Makefile
config.status: creating test/testcases/Makefile
config.status: creating test/C/Makefile
config.status: creating test/mcoll_perf/Makefile
config.status: creating test/test_check_header/Makefile
config.status: creating test/largefile/Makefile
config.status: creating test/mcoll_fortran/Makefile
config.status: creating src/lib/ncconfig.h
config.status: creating src/libf/pnetcdf.inc
config.status: creating src/libf/nfconfig.inc
parallel-netCDF features:
. parallel-netcdf configured WITH support for large files
. parallel-netcdf configured WITH fortran bindings
. parallel-netcdf configured WITH nonblocking routines
. parallel-netcdf configured WITH giant variable support
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make[1]: Entering directory `/tmp/pnetcdf/test'
set -e; for i in common test_double test_double_int test_float test_int test_dtype nc_test fandc nf_test largefile C mcoll_perf mcoll_fortran test_check_header testcases; do ( cd $i && make ; ) ; done
make[2]: Entering directory `/tmp/pnetcdf/test/common'
/install/mpich2-121/bin/mpicc -g -O2 -c -o testutils.o /git/parallel-netcdf/test/common/testutils.c
ar cru libtestutils.a testutils.o
make[2]: Leaving directory `/tmp/pnetcdf/test/common'
make[2]: Entering directory `/tmp/pnetcdf/test/test_double'
/install/mpich2-121/bin/mpicc -g -O2 -I/git/parallel-netcdf/test/test_double/../../src/lib -I/git/parallel-netcdf/test/test_double/../common -c /git/parallel-netcdf/test/test_double/test_read.c
/install/mpich2-121/bin/mpicc -o test_read test_read.o -L../../src/lib -L../common -lpnetcdf -ltestutils
/install/mpich2-121/bin/mpicc -g -O2 -I/git/parallel-netcdf/test/test_double/../../src/lib -I/git/parallel-netcdf/test/test_double/../common -c /git/parallel-netcdf/test/test_double/test_read_indep.c
/install/mpich2-121/bin/mpicc -o test_read_indep test_read_indep.o -L../../src/lib -L../common -lpnetcdf -ltestutils
/install/mpich2-121/bin/mpicc -g -O2 -I/git/parallel-netcdf/test/test_double/../../src/lib -I/git/parallel-netcdf/test/test_double/../common -c /git/parallel-netcdf/test/test_double/test_write.c
/install/mpich2-121/bin/mpicc -o test_write test_write.o -L../../src/lib -L../common -lpnetcdf -ltestutils
/install/mpich2-121/bin/mpicc -g -O2 -I/git/parallel-netcdf/test/test_double/../../src/lib -I/git/parallel-netcdf/test/test_double/../common -c /git/parallel-netcdf/test/test_double/test_write_indep.c
/install/mpich2-121/bin/mpicc -o test_write_indep test_write_indep.o -L../../src/lib -L../common -lpnetcdf -ltestutils
make[2]: Leaving directory `/tmp/pnetcdf/test/test_double'
make[2]: Entering directory `/tmp/pnetcdf/test/test_double_int'
/install/mpich2-121/bin/mpicc -g -O2 -I/git/parallel-netcdf/test/test_double_int/../../src/lib -I/git/parallel-netcdf/test/test_double_int/../common -c /git/parallel-netcdf/test/test_double_int/test_read.c
/install/mpich2-121/bin/mpicc -o test_read test_read.o -L../../src/lib -L../common -lpnetcdf -ltestutils
/install/mpich2-121/bin/mpicc -g -O2 -I/git/parallel-netcdf/test/test_double_int/../../src/lib -I/git/parallel-netcdf/test/test_double_int/../common -c /git/parallel-netcdf/test/test_double_int/test_read_indep.c
/install/mpich2-121/bin/mpicc -o test_read_indep test_read_indep.o -L../../src/lib -L../common -lpnetcdf -ltestutils
/install/mpich2-121/bin/mpicc -g -O2 -I/git/parallel-netcdf/test/test_double_int/../../src/lib -I/git/parallel-netcdf/test/test_double_int/../common -c /git/parallel-netcdf/test/test_double_int/test_write.c
/install/mpich2-121/bin/mpicc -o test_write test_write.o -L../../src/lib -L../common -lpnetcdf -ltestutils
/install/mpich2-121/bin/mpicc -g -O2 -I/git/parallel-netcdf/test/test_double_int/../../src/lib -I/git/parallel-netcdf/test/test_double_int/../common -c /git/parallel-netcdf/test/test_double_int/test_write_indep.c
/install/mpich2-121/bin/mpicc -o test_write_indep test_write_indep.o -L../../src/lib -L../common -lpnetcdf -ltestutils
make[2]: Leaving directory `/tmp/pnetcdf/test/test_double_int'
make[2]: Entering directory `/tmp/pnetcdf/test/test_float'
/install/mpich2-121/bin/mpicc -g -O2 -I/git/parallel-netcdf/test/test_float/../../src/lib -I/git/parallel-netcdf/test/test_float/../common -c /git/parallel-netcdf/test/test_float/test_read.c
/install/mpich2-121/bin/mpicc -o test_read test_read.o -L../../src/lib -L..//common -lpnetcdf -ltestutils
/install/mpich2-121/bin/mpicc -g -O2 -I/git/parallel-netcdf/test/test_float/../../src/lib -I/git/parallel-netcdf/test/test_float/../common -c /git/parallel-netcdf/test/test_float/test_read_indep.c
/install/mpich2-121/bin/mpicc -o test_read_indep test_read_indep.o -L../../src/lib -L..//common -lpnetcdf -ltestutils
/install/mpich2-121/bin/mpicc -g -O2 -I/git/parallel-netcdf/test/test_float/../../src/lib -I/git/parallel-netcdf/test/test_float/../common -c /git/parallel-netcdf/test/test_float/test_write.c
/install/mpich2-121/bin/mpicc -o test_write test_write.o -L../../src/lib -L..//common -lpnetcdf -ltestutils
/install/mpich2-121/bin/mpicc -g -O2 -I/git/parallel-netcdf/test/test_float/../../src/lib -I/git/parallel-netcdf/test/test_float/../common -c /git/parallel-netcdf/test/test_float/test_write_indep.c
/install/mpich2-121/bin/mpicc -o test_write_indep test_write_indep.o -L../../src/lib -L..//common -lpnetcdf -ltestutils
make[2]: Leaving directory `/tmp/pnetcdf/test/test_float'
make[2]: Entering directory `/tmp/pnetcdf/test/test_int'
/install/mpich2-121/bin/mpicc -g -O2 -I/git/parallel-netcdf/test/test_int/../../src/lib -I/git/parallel-netcdf/test/test_int/../common -c /git/parallel-netcdf/test/test_int/test_read.c
/install/mpich2-121/bin/mpicc -o test_read test_read.o -L../../src/lib -L..//common -lpnetcdf -ltestutils
/install/mpich2-121/bin/mpicc -g -O2 -I/git/parallel-netcdf/test/test_int/../../src/lib -I/git/parallel-netcdf/test/test_int/../common -c /git/parallel-netcdf/test/test_int/test_read_indep.c
/install/mpich2-121/bin/mpicc -o test_read_indep test_read_indep.o -L../../src/lib -L..//common -lpnetcdf -ltestutils
/install/mpich2-121/bin/mpicc -g -O2 -I/git/parallel-netcdf/test/test_int/../../src/lib -I/git/parallel-netcdf/test/test_int/../common -c /git/parallel-netcdf/test/test_int/test_write.c
/install/mpich2-121/bin/mpicc -o test_write test_write.o -L../../src/lib -L..//common -lpnetcdf -ltestutils
/install/mpich2-121/bin/mpicc -g -O2 -I/git/parallel-netcdf/test/test_int/../../src/lib -I/git/parallel-netcdf/test/test_int/../common -c /git/parallel-netcdf/test/test_int/test_write_indep.c
/install/mpich2-121/bin/mpicc -o test_write_indep test_write_indep.o -L../../src/lib -L..//common -lpnetcdf -ltestutils
/install/mpich2-121/bin/mpicc -g -O2 -I/git/parallel-netcdf/test/test_int/../../src/lib -I/git/parallel-netcdf/test/test_int/../common -c /git/parallel-netcdf/test/test_int/test_write64.c
/install/mpich2-121/bin/mpicc -o test_write64 test_write64.o -L../../src/lib -L..//common -lpnetcdf -ltestutils
/install/mpich2-121/bin/mpicc -g -O2 -I/git/parallel-netcdf/test/test_int/../../src/lib -I/git/parallel-netcdf/test/test_int/../common -c /git/parallel-netcdf/test/test_int/test_read64.c
/install/mpich2-121/bin/mpicc -o test_read64 test_read64.o -L../../src/lib -L..//common -lpnetcdf -ltestutils
make[2]: Leaving directory `/tmp/pnetcdf/test/test_int'
make[2]: Entering directory `/tmp/pnetcdf/test/test_dtype'
/install/mpich2-121/bin/mpicc -g -O2 -I/git/parallel-netcdf/test/test_dtype/../../src/lib -c /git/parallel-netcdf/test/test_dtype/test_subarray.c
/install/mpich2-121/bin/mpicc -o test_subarray test_subarray.o -L../../src/lib -lpnetcdf
/install/mpich2-121/bin/mpicc -g -O2 -I/git/parallel-netcdf/test/test_dtype/../../src/lib -c /git/parallel-netcdf/test/test_dtype/test_darray.c
/install/mpich2-121/bin/mpicc -o test_darray test_darray.o -L../../src/lib -lpnetcdf
/install/mpich2-121/bin/mpicc -g -O2 -I/git/parallel-netcdf/test/test_dtype/../../src/lib -c /git/parallel-netcdf/test/test_dtype/test_nonblocking.c
/install/mpich2-121/bin/mpicc -o test_nonblocking test_nonblocking.o -L../../src/lib -lpnetcdf
make[2]: Leaving directory `/tmp/pnetcdf/test/test_dtype'
make[2]: Entering directory `/tmp/pnetcdf/test/nc_test'
/install/mpich2-121/bin/mpicc -c -g -O2 -I/git/parallel-netcdf/test/nc_test/../../src/lib -I/git/parallel-netcdf/test/nc_test /git/parallel-netcdf/test/nc_test/nc_test.c
/install/mpich2-121/bin/mpicc -c -g -O2 -I/git/parallel-netcdf/test/nc_test/../../src/lib -I/git/parallel-netcdf/test/nc_test /git/parallel-netcdf/test/nc_test/error.c
/install/mpich2-121/bin/mpicc -c -g -O2 -I/git/parallel-netcdf/test/nc_test/../../src/lib -I/git/parallel-netcdf/test/nc_test /git/parallel-netcdf/test/nc_test/test_get.c
/install/mpich2-121/bin/mpicc -c -g -O2 -I/git/parallel-netcdf/test/nc_test/../../src/lib -I/git/parallel-netcdf/test/nc_test /git/parallel-netcdf/test/nc_test/test_put.c
/install/mpich2-121/bin/mpicc -c -g -O2 -I/git/parallel-netcdf/test/nc_test/../../src/lib -I/git/parallel-netcdf/test/nc_test /git/parallel-netcdf/test/nc_test/test_read.c
/install/mpich2-121/bin/mpicc -c -g -O2 -I/git/parallel-netcdf/test/nc_test/../../src/lib -I/git/parallel-netcdf/test/nc_test /git/parallel-netcdf/test/nc_test/test_write.c
/install/mpich2-121/bin/mpicc -c -g -O2 -I/git/parallel-netcdf/test/nc_test/../../src/lib -I/git/parallel-netcdf/test/nc_test /git/parallel-netcdf/test/nc_test/util.c
/install/mpich2-121/bin/mpicc -o nc_test -g -O2 nc_test.o error.o test_get.o test_put.o test_read.o test_write.o util.o -L../../src/lib -lpnetcdf -lm
make[2]: Leaving directory `/tmp/pnetcdf/test/nc_test'
make[2]: Entering directory `/tmp/pnetcdf/test/fandc'
/usr/bin/gfortran -o pnctestf -o pnctestf /git/parallel-netcdf/test/fandc/pnctestf.F -I../../src/libf/ -L../../src/lib -lpnetcdf -lm
/git/parallel-netcdf/test/fandc/pnctestf.F:6: Error: Can't open included file 'mpif.h'
/git/parallel-netcdf/test/fandc/pnctestf.F:37.40:
call MPI_Comm_Size (MPI_COMM_WORLD, totpes, ierr)
1
Error: Symbol 'mpi_comm_world' at (1) has no IMPLICIT type
/git/parallel-netcdf/test/fandc/pnctestf.F:47.38:
& MPI_INFO_NULL, ncid)
1
Error: Symbol 'mpi_info_null' at (1) has no IMPLICIT type
make[2]: *** [pnctestf] Error 1
make[2]: Leaving directory `/tmp/pnetcdf/test/fandc'
make[1]: *** [all] Error 2
make[1]: Leaving directory `/tmp/pnetcdf/test'
make: *** [tests] Error 2
-------------- next part --------------
make[1]: Entering directory `/tmp/pnetcdf'
Making `all' in directory /tmp/pnetcdf/src
make[2]: Entering directory `/tmp/pnetcdf/src'
cd lib && make
make[3]: Entering directory `/tmp/pnetcdf/src/lib'
ar cru libpnetcdf.a mpinetcdf.o header.o mpincio.o attr.o dim.o error.o nc.o ncx.o string.o var.o ncmpidtype.o
ranlib libpnetcdf.a
make[3]: Leaving directory `/tmp/pnetcdf/src/lib'
if [ yes = yes ] ; then cd libf && make ; fi
make[3]: Entering directory `/tmp/pnetcdf/src/libf'
/usr/bin/gfortran -c /git/parallel-netcdf/src/libf/strerrorf.f
/usr/bin/gfortran -c /git/parallel-netcdf/src/libf/inq_libversf.f
ar cru ../lib/libpnetcdf.a abortf.o begin_indep_dataf.o closef.o copy_attf.o createf.o def_dimf.o def_varf.o del_attf.o enddeff.o end_indep_dataf.o get_att_doublef.o get_att_realf.o get_att_intf.o get_att_int1f.o get_att_int2f.o get_att_textf.o get_var1_doublef.o get_var1f.o get_var1_realf.o get_var1_intf.o get_var1_int2f.o get_var1_textf.o get_vara_allf.o get_vara_double_allf.o get_vara_doublef.o get_varaf.o get_vara_real_allf.o get_vara_realf.o get_vara_int_allf.o get_vara_intf.o get_var_allf.o get_vara_int2_allf.o get_vara_int2f.o get_vara_text_allf.o get_vara_textf.o get_var_double_allf.o get_var_doublef.o get_varf.o get_var_real_allf.o get_var_realf.o get_var_int_allf.o get_var_intf.o get_vars_allf.o get_vars_double_allf.o get_vars_doublef.o get_varsf.o get_vars_real_allf.o get_vars_realf.o get_var_int2_allf.o get_var_int2f.o get_vars_int_allf.o get_vars_intf.o get_vars_int2_allf.o get_vars_int2f.o get_vars_text_allf.o get_vars_textf.o get_var_text_allf.o get_var_textf.o inq_attf.o inq_attidf.o inq_attlenf.o inq_attnamef.o inq_atttypef.o inq_dimf.o inq_dimidf.o inq_dimlenf.o inq_dimnamef.o inqf.o inq_nattsf.o inq_ndimsf.o inq_nvarsf.o inq_unlimdimf.o inq_vardimidf.o inq_varf.o inq_varidf.o inq_varnamef.o inq_varnattsf.o inq_varndimsf.o inq_vartypef.o openf.o put_att_doublef.o put_att_realf.o put_att_intf.o put_att_int1f.o put_att_int2f.o put_att_textf.o put_var1_doublef.o put_var1f.o put_var1_realf.o put_var1_intf.o put_var1_int2f.o put_var1_textf.o put_vara_allf.o put_vara_double_allf.o put_vara_doublef.o put_varaf.o put_vara_real_allf.o put_vara_realf.o put_vara_int_allf.o put_vara_intf.o put_vara_int2_allf.o put_vara_int2f.o put_vara_text_allf.o put_vara_textf.o put_var_doublef.o put_varf.o put_var_realf.o put_var_intf.o put_vars_allf.o put_vars_double_allf.o put_vars_doublef.o put_varsf.o put_vars_real_allf.o put_vars_realf.o put_var_int2f.o put_vars_int_allf.o put_vars_intf.o put_vars_int2_allf.o put_vars_int2f.o put_vars_text_allf.o put_vars_textf.o put_var_textf.o redeff.o rename_attf.o rename_dimf.o rename_varf.o syncf.o nfxutil.o xstrerrorf.o xinq_libversf.o get_var1_int1f.o get_var_int1_allf.o get_var_int1f.o get_vara_int1_allf.o get_vara_int1f.o get_vars_int1_allf.o get_vars_int1f.o put_var1_int1f.o put_var_int1f.o put_vara_int1_allf.o put_vara_int1f.o put_vars_int1_allf.o put_vars_int1f.o get_varm_allf.o get_varm_double_allf.o get_varm_doublef.o get_varmf.o get_varm_int1_allf.o get_varm_int1f.o get_varm_int2_allf.o get_varm_int2f.o get_varm_int_allf.o get_varm_intf.o get_varm_real_allf.o get_varm_realf.o get_varm_text_allf.o get_varm_textf.o put_varm_allf.o put_varm_double_allf.o put_varm_doublef.o put_varmf.o put_varm_int1_allf.o put_varm_int1f.o put_varm_int2_allf.o put_varm_int2f.o put_varm_int_allf.o put_varm_intf.o put_varm_real_allf.o put_varm_realf.o put_varm_text_allf.o put_varm_textf.o set_fillf.o set_default_formatf.o issyserrf.o get_file_infof.o deletef.o iput_vara_allf.o iput_vara_int1_allf.o iput_vara_text_allf.o iput_vara_int2_allf.o iput_vara_int_allf.o iput_vara_real_allf.o iput_vara_double_allf.o iget_vara_allf.o iget_vara_int1_allf.o iget_vara_text_allf.o iget_vara_int2_allf.o iget_vara_int_allf.o iget_vara_real_allf.o iget_vara_double_allf.o waitallf.o waitf.o mvar.o strerrorf.o inq_libversf.o
ranlib ../lib/libpnetcdf.a
make[3]: Leaving directory `/tmp/pnetcdf/src/libf'
cd utils && make
make[3]: Entering directory `/tmp/pnetcdf/src/utils'
cd ncgen && make
make[4]: Entering directory `/tmp/pnetcdf/src/utils/ncgen'
/install/mpich2-121/bin/mpicc -c -g -O2 -I/git/parallel-netcdf/src/utils/ncgen/../../../src/lib -I/git/parallel-netcdf/src/utils/ncgen -I. /git/parallel-netcdf/src/utils/ncgen/main.c
/install/mpich2-121/bin/mpicc -c -g -O2 -I/git/parallel-netcdf/src/utils/ncgen/../../../src/lib -I/git/parallel-netcdf/src/utils/ncgen -I. /git/parallel-netcdf/src/utils/ncgen/load.c
bison -y -d /git/parallel-netcdf/src/utils/ncgen/ncgen.y; \
mv y.tab.c ncgentab.c; \
mv y.tab.h ncgentab.h
/install/mpich2-121/bin/mpicc -c -g -O2 -I/git/parallel-netcdf/src/utils/ncgen/../../../src/lib -I/git/parallel-netcdf/src/utils/ncgen -I. ncgentab.c
/install/mpich2-121/bin/mpicc -c -g -O2 -I/git/parallel-netcdf/src/utils/ncgen/../../../src/lib -I/git/parallel-netcdf/src/utils/ncgen -I. /git/parallel-netcdf/src/utils/ncgen/escapes.c
/install/mpich2-121/bin/mpicc -c -g -O2 -I/git/parallel-netcdf/src/utils/ncgen/../../../src/lib -I/git/parallel-netcdf/src/utils/ncgen -I. /git/parallel-netcdf/src/utils/ncgen/getfill.c
/install/mpich2-121/bin/mpicc -c -g -O2 -I/git/parallel-netcdf/src/utils/ncgen/../../../src/lib -I/git/parallel-netcdf/src/utils/ncgen -I. /git/parallel-netcdf/src/utils/ncgen/init.c
/install/mpich2-121/bin/mpicc -c -g -O2 -I/git/parallel-netcdf/src/utils/ncgen/../../../src/lib -I/git/parallel-netcdf/src/utils/ncgen -I. /git/parallel-netcdf/src/utils/ncgen/genlib.c
/install/mpich2-121/bin/mpicc -o ncmpigen -g -O2 main.o load.o ncgentab.o escapes.o getfill.o init.o genlib.o -L../../../src/lib -lpnetcdf
make[4]: Leaving directory `/tmp/pnetcdf/src/utils/ncgen'
cd ncdump && make
make[4]: Entering directory `/tmp/pnetcdf/src/utils/ncdump'
/install/mpich2-121/bin/mpicc -c -g -O2 -I/git/parallel-netcdf/src/utils/ncdump/../../../src/lib -I/git/parallel-netcdf/src/utils/ncdump /git/parallel-netcdf/src/utils/ncdump/ncdump.c
/install/mpich2-121/bin/mpicc -c -g -O2 -I/git/parallel-netcdf/src/utils/ncdump/../../../src/lib -I/git/parallel-netcdf/src/utils/ncdump /git/parallel-netcdf/src/utils/ncdump/vardata.c
/install/mpich2-121/bin/mpicc -c -g -O2 -I/git/parallel-netcdf/src/utils/ncdump/../../../src/lib -I/git/parallel-netcdf/src/utils/ncdump /git/parallel-netcdf/src/utils/ncdump/dumplib.c
/install/mpich2-121/bin/mpicc -o ncmpidump -g -O2 ncdump.o vardata.o dumplib.o -L../../../src/lib -lpnetcdf
make[4]: Leaving directory `/tmp/pnetcdf/src/utils/ncdump'
make[3]: Leaving directory `/tmp/pnetcdf/src/utils'
make[2]: Leaving directory `/tmp/pnetcdf/src'
Returning to directory /tmp/pnetcdf
make[1]: Leaving directory `/tmp/pnetcdf'
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