[Nek5000-users] Problem in using .re2 file
nek5000-users at lists.mcs.anl.gov
nek5000-users at lists.mcs.anl.gov
Thu May 18 09:25:18 CDT 2017
Please attached the .rea file. This is the smaller version (generated
with the .re2 file). Please let me know if you want the full version as
well.
Thanks for your time.
NN.
On Thursday 18 May 2017 04:19 PM, nek5000-users at lists.mcs.anl.gov wrote:
> Can you please post your .rea file
>
> -----Original message-----
>> From:nek5000-users at lists.mcs.anl.gov <nek5000-users at lists.mcs.anl.gov>
>> Sent: Thursday 18th May 2017 16:13
>> To: nek5000-users at lists.mcs.anl.gov
>> Subject: Re: [Nek5000-users] Problem in using .re2 file
>>
>> I have prepared the mesh using GAMBIT. Then using a converter I generated
>> the .rea file in ASCII format. This .rea file works fine with NEK5000.
>> However,
>> when I convert to .re2 the problem shows up...
>>
>>
>> On Thursday 18 May 2017 04:06 PM, nek5000-users at lists.mcs.anl.gov wrote:
>>> How do you generate your mesh/rea?
>>>
>>> -----Original message-----
>>>> From:nek5000-users at lists.mcs.anl.gov <nek5000-users at lists.mcs.anl.gov>
>>>> Sent: Thursday 18th May 2017 16:02
>>>> To: nek5000-users at lists.mcs.anl.gov
>>>> Subject: [Nek5000-users] Problem in using .re2 file
>>>>
>>>> Hi Neks,
>>>> I have encountered a problem while using .re2 file. When I use
>>>> it,
>>>> I get the following warning in the output file and the code hangs
>>>> up.
>>>> WARNINGb: Detected non-right-handed element.
>>>> Number 14621 V1-8: -.1290E+21 .0000E+00 .6991E+01
>>>> .0000E+00
>>>> WARNINGb: Detected non-right-handed element.
>>>> WARNINGb: Detected non-right-handed element.
>>>> If, however, I use the full ASCII .rea file, the code runs fine.
>>>> What
>>>> could be the problem in using .re2 file? Kindly suggest a remedy.
>>>> I would like to mention that first I create the full ASCII .rea
>>>> file and generate
>>>> the .map file from it. Then, I use the executable "reatore2" to
>>>> make the
>>>> .re2 file and smaller ASCII .rea file. I do not make any change in
>>>> the smaller
>>>> ASCII .rea file.
>>>> Many thanks,
>>>> NN.
>>>> _______________________________________________
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>>>> Nek5000-users at lists.mcs.anl.gov
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-------------- next part --------------
****** PARAMETERS *****
2.610000 NEKTON VERSION
3 DIMENSIONAL RUN
103 PARAMETERS FOLLOW
1.00000 p1 DENSITY
-100.00 p2 VISCOS
0.
0.
0.
0.
1.00000 p7 RHOCP
1.00000 p8 CONDUCT
0.
0. p10 FINTIME
80000.0 p11 NSTEPS
-0.0015 p12 DT
0. p13 IOCOMM
0. p14 IOTIME
500.000 p15 IOSTEP
0. p16 PSSOLVER
0.
0.250000E-01 p18 GRID
-1.00000 p19 INTYPE
7.0000 p20 NORDER
0.100000E-10 p21 DIVERGENCE
0.100000E-11 p22 HELMHOLTZ
0 p23 NPSCAL
0.100000E-09 p24 TOLREL
0.100000E-09 p25 TOLABS
5.00000 p26 COURANT/NTAU
2.00000 p27 TORDER
0. p28 TORDER: mesh velocity (0: p28=p27)
0. p29 magnetic visc if > 0, = -1/Rm if < 0
0. p30 > 0 ==> properties set in uservp()
-1. p31 NPERT: #perturbation modes
0. p32 #BCs in re2 file, if > 0
0.
0.
0.
0.
0.
0.
0.
0.
0. p41 1-->multiplicative SEMG
0. p42 0=gmres/1=pcg
0.00000 p43 0=semg/1=schwarz
0. p44 0=E-based/1=A-based prec.
0. p45 Relaxation factor for DTFS
0. p46 reserved
0. p47 vnu: mesh matieral prop
0.
0.
0.
0.
0. p52 IOHIS
0.
0. p54 1,2,3-->fixed flow rate dir=x,y,z
0. p55 vol.flow rate (p54>0) or Ubar (p54<0)
0.
0.
0.
0. p59 !=0 --> full Jac. eval. for each el.
0. p60 !=0 --> init. velocity to small nonzero
0.
0. p62 >0 --> force byte_swap for output
0. p63 =8 --> force 8-byte output
0. p64 =1 --> perturbation restart
1. p65 #iofiles (eg, 0 or 64); <0 --> sep. dirs
4.000 p66 output : <0=ascii, else binary
4.000 p67 restart: <0=ascii, else binary
0. p68 iastep: freq for avg_all
0.
0.
0.
0.
0.
0. p74 verbose Helmholtz
0.
0.
0.
0.
0.
0.
0.
0.
0.
0. p84 !=0 --> sets initial timestep if p12>0
0. p85 dt ratio if p84 !=0, for timesteps>0
0. p86 reserved
0.
0.
0.
0.
0.
0.
20.0000 p93 Number of previous pressure solns saved
5.00000 p94 start projecting velocity after p94 step
3.00000 p95 start projecting pressure after p95 step
0.00000 p96 u0 translational velocity (in .usr)
0.00000 p97 v0 translational velocity (in .usr)
0.
4.00000 p99 dealiasing: <0--> off/3--> old/4--> new
0.
0. p101 No. of additional filter modes
1.00000 p102 Dump out divergence at each time step
.000 p103 weight of stabilizing filter (.01)
4 Lines of passive scalar data follows2 CONDUCT; 2RHOCP
1.00000 1.00000 1.00000 1.00000 1.00000
1.00000 1.00000 1.00000 1.00000
1.00000 1.00000 1.00000 1.00000 1.00000
1.00000 1.00000 1.00000 1.00000
13 LOGICAL SWITCHES FOLLOW
T IFFLOW
F IFHEAT
T IFTRAN
T F F F F F F F F F F IFNAV & IFADVC (convection in P.S. fields)
F F T T T T T T T T T T IFTMSH (IF mesh for this field is T mesh)
F IFAXIS
F IFSTRS
F IFSPLIT
F IFMGRID
F IFMODEL
F IFKEPS
F IFMVBD
F IFCHAR
8.00000 8.00000 -0.500000 -4.00000 XFAC,YFAC,XZERO,YZERO
**MESH DATA** 6 lines are X,Y,Z;X,Y,Z. Columns corners 1-4;5-8
-21336 3 21336 NELT,NDIM,NELV
0 PRESOLVE/RESTART OPTIONS *****
7 INITIAL CONDITIONS *****
C Default
C Default
C Default
C Default
C Default
C Default
C Default
***** DRIVE FORCE DATA ***** BODY FORCE, FLOW, Q
4 Lines of Drive force data follow
C
C
C
C
***** Variable Property Data ***** Overrrides Parameter data.
1 Lines follow.
0 PACKETS OF DATA FOLLOW
***** HISTORY AND INTEGRAL DATA *****
0 POINTS. Hcode, I,J,H,IEL
***** OUTPUT FIELD SPECIFICATION *****
6 SPECIFICATIONS FOLLOW
T COORDINATES
T VELOCITY
T PRESSURE
F TEMPERATURE
F TEMPERATURE GRADIENT
0 PASSIVE SCALARS
***** OBJECT SPECIFICATION *****
0 Surface Objects
0 Volume Objects
0 Edge Objects
0 Point Object
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