[Nek5000-users] maketools all fails at postnek on RHEL6.4

Wed Dec 14 11:18:00 CST 2016

Paul,

this is not related to BIGMEM. He is using the master branch which had a bug in the make system. 

Stefan

-----Original message-----
> From:nek5000-users at lists.mcs.anl.gov <nek5000-users at lists.mcs.anl.gov>
> Sent: Wednesday 14th December 2016 18:11
> To: nek5000-users at lists.mcs.anl.gov
> Subject: Re: [Nek5000-users] maketools all fails at postnek on RHEL6.4
> 
> 
> Hi Richard,
> 
> I find on my mac that I have to set BIGMEM="false" to get make tools to complete.
> 
> That being said, it's been awhile since I've built maketools, so I'm not certain if there
> is another open issue at present.
> 
> We're getting close to a new release where everything should soon be sorted out.
> 
> Paul
> 
> -----------
> From: nek5000-users-bounces at lists.mcs.anl.gov [nek5000-users-bounces at lists.mcs.anl.gov] on behalf of nek5000-users at lists.mcs.anl.gov [nek5000-users at lists.mcs.anl.gov]
> Sent: Wednesday, December 14, 2016 8:44 AM
> To: nek5000-users at lists.mcs.anl.gov
> Subject: Re: [Nek5000-users] maketools all fails at postnek on RHEL6.4
> 
> Using the tarball at https://github.com/Nek5000/nek5000/archive/master.tar.gz to compile locally on my RHEL6.4 server.  During maketools event, only the genmap and n2to3 tools are compiled and the make event fails out as shown below.  Is
>  this attributed to BIGMEM=”true” in maketools, or something else?  Can anyone help?  Error and gcc/gfortran information below…
> Thanks
> Richard P
> [user at rhel64 tools]$ gedit maketools 
> [user at rhel64 tools]$ ./maketools all /nfs/home/user/Nek5000
> ----------------------
> Make genmap...
> ----------------------
> make[1]: Entering directory `/home/user/Nek5000-master/tools/genmap'
> gfortran -mcmodel=medium -fdefault-real-8 -o /nfs/home/user/Nek5000/genmap genmap.o byte.o 
> make[1]: Leaving directory `/home/user/Nek5000-master/tools/genmap'
> ----------------------
> Make n2to3...
> ----------------------
> make[1]: Entering directory `/home/user/Nek5000-master/tools/n2to3'
> gfortran -mcmodel=medium   -o /nfs/home/user/Nek5000/n2to3 n2to3.o byte.o  
> make[1]: Leaving directory `/home/user/Nek5000-master/tools/n2to3'
> ----------------------
> Make postnek...
> ----------------------
> make[1]: Entering directory `/home/user/Nek5000-master/tools/postnek'
> gfortran -mcmodel=medium -c    postnek.f 
> postnek.f:1977.19:
>          ifbswap = if_byte_swap_test(test)                             
>                    1
> Warning: Extension: Conversion from INTEGER(4) to LOGICAL(4) at (1)
> gfortran -mcmodel=medium -c    postnek2.f
> gfortran -mcmodel=medium -c    postnek3.f
> postnek3.f:1552.20:
>       COMMON /CTMP4/ wk(LXYZ,3,3)                                      
>                     1
> Warning: Named COMMON block 'ctmp4' at (1) shall be of the same size
> gfortran -mcmodel=medium -c    postnek5.f
> postnek5.f:711.21:
>       COMMON /ccdiag/ iee,iii                                          
>                      1
> Warning: Named COMMON block 'ccdiag' at (1) shall be of the same size
> gfortran -mcmodel=medium -c    postnek6.f
> gfortran -mcmodel=medium -c    tsort.f
> gfortran -mcmodel=medium -c    postnek8.f
> devices.inc:22.19:
>     Included at basics.inc:168:
>     Included at postnek8.f:96:
>       COMMON/SCALE/XFAC ,YFAC ,XZERO ,YZERO                            
>                    1
> Warning: Named COMMON block 'scale' at (1) shall be of the same size
> gfortran -mcmodel=medium -c    postnek9.f
> gfortran -mcmodel=medium -c    plot.f
> gfortran -mcmodel=medium -c    getfld.f 
> gfortran -mcmodel=medium -c    legend.f
> gfortran -mcmodel=medium -c    userf.f
> userf.f:1282.21:
>       common /rlobjs/    x_l_objs(mopts),y_l_objs(mopts),z_l_objs(mopts)
>                      1
> Warning: Named COMMON block 'rlobjs' at (1) shall be of the same size
> userf.f:1816.21:
>       common /rlobjs/ avg(6,0:mopts-1,3)                               
>                      1
> Warning: Named COMMON block 'rlobjs' at (1) shall be of the same size
> userf.f:5261.20:
>       common /ctmp1/ uavg(nxm*nelm),vavg(nxm*nelm),wavg(nxm*nelm)      
>                     1
> Warning: Named COMMON block 'ctmp1' at (1) shall be of the same size
> gfortran -mcmodel=medium -c    trap.f
> gfortran -mcmodel=medium -c    animate.f
> gfortran -mcmodel=medium -c    genxyz.f
> gfortran -mcmodel=medium -c    screen.f
> gfortran -mcmodel=medium -c    g3d.f
> gfortran -mcmodel=medium -c    subs.f
> gfortran -mcmodel=medium -c    xinterface.f
> gfortran -mcmodel=medium -c    locglob.f 
> gfortran -mcmodel=medium -c    postnek5a.f
> gfortran -mcmodel=medium -c    ../../nek/3rd_party/blas.f
> gfortran: ../../nek/3rd_party/blas.f: No such file or directory
> gfortran: no input files
> make[1]: *** [blas.o] Error 1
> make[1]: Leaving directory `/home/user/Nek5000-master/tools/postnek'
> make: *** [all] Error 1
> ###########gcc and gfortran details for server##########
> [user at rhel64 tools]$ rpm -qa | grep gcc
> gcc-4.4.7-3.el6.x86_64
> compat-gcc-34-3.4.6-19.el6.x86_64
> gcc-gfortran-4.4.7-3.el6.x86_64
> libgcc-4.4.7-3.el6.i686
> gcc-c-4.4.7-3.el6.x86_64
> libgcc-4.4.7-3.el6.x86_64
> [user at rhel64 tools]$ rpm -qa | grep gfortran
> gcc-gfortran-4.4.7-3.el6.x86_64
> libgfortran-4.4.7-3.el6.x86_64
> compat-libgfortran-41-4.1.2-39.el6.x86_64
> Richard B Powell
> Technical Architect II
> Operations/Server Engineering
> AREVA, Inc.
> 3315 Old Forest Road OF-60
> Lynchburg, VA  24501
> Phone: 1 434-832-3894
> Fax: 1 434-382-3894
> _______________________________________________
> Nek5000-users mailing list
> Nek5000-users at lists.mcs.anl.gov
> https://lists.mcs.anl.gov/mailman/listinfo/nek5000-users