[Nek5000-users] convert mesh by MOAB

nek5000-users at lists.mcs.anl.gov nek5000-users at lists.mcs.anl.gov
Thu Aug 29 16:57:46 CDT 2013


[Taking the conversation offline now, I'm guessing it's inability to read latest .cub file format.]

- tim

On 08/29/2013 04:31 PM, nek5000-users at lists.mcs.anl.gov wrote:
> mbpart also is not working!!
>
>
> On Thu, Aug 29, 2013 at 4:41 PM, <nek5000-users at lists.mcs.anl.gov <mailto:nek5000-users at lists.mcs.anl.gov>> wrote:
>
>     Are you working in serial or parallel?  If the latter you'll have to partition the mesh, using moab's mbpart tool...
>
>     - tim
>
>
>     On 08/29/2013 03:07 PM, nek5000-users at lists.mcs.anl.__gov <mailto:nek5000-users at lists.mcs.anl.gov> wrote:
>
>         Sorry, but that doesn't work too, it gives me
>         Failed to load "pipe.e".
>         Error code: MB_INDEX_OUT_OF_RANGE (1)
>         Error message: pipe.e: Trouble reading vertices
>
>         I tried every exporting format but none of them wasn't work, I just made a pipe with map type meshing and then I
>         used
>         ''compress ids all" then I exported it as output. everything before that seems good but MOAB gives me different
>         errors!!
>
>         Thanks,
>         Ami
>
>
>         On Thu, Aug 29, 2013 at 3:49 PM, <nek5000-users at lists.mcs.anl.__gov <mailto:nek5000-users at lists.mcs.anl.gov>
>         <mailto:nek5000-users at lists.__mcs.anl.gov <mailto:nek5000-users at lists.mcs.anl.gov>>> wrote:
>
>              Try going through ExodusII (.exo or .g), that might work.  Also, which version of cubit are you using?
>
>              - tim
>
>
>              On 08/29/2013 02:38 PM, nek5000-users at lists.mcs.anl.____gov <mailto:nek5000-users at lists.__mcs.anl.gov
>         <mailto:nek5000-users at lists.mcs.anl.gov>> wrote:
>
>                  Thanks tim for your answer,
>                  I used that command and now I get this error.
>
>                  Segmentation fault (core dumped)
>
>                  I don't know whatis the problem with my meshing because I can convert from gmsh files (.msh) to .h5m
>         but for
>                  cubit it
>                  gets stocked!! Do you have any idea what is the problem wiht my meshing stuff with cubit?
>
>                  Thanks,
>                  Amirreza
>
>
>                  On Thu, Aug 29, 2013 at 2:34 PM, <nek5000-users at lists.mcs.anl.____gov
>         <mailto:nek5000-users at lists.__mcs.anl.gov <mailto:nek5000-users at lists.mcs.anl.gov>>
>
>                  <mailto:nek5000-users at lists. <mailto:nek5000-users at lists.>____mcs.anl.gov <http://mcs.anl.gov>
>         <mailto:nek5000-users at lists.__mcs.anl.gov <mailto:nek5000-users at lists.mcs.anl.gov>>>> wrote:
>
>                       Before saving to the .cub file, use the Trelis (Cubit) command "compress ids all".
>
>                       - tim
>
>
>                       On 08/29/2013 01:21 PM, nek5000-users at lists.mcs.anl.______gov <mailto:nek5000-users at lists.
>         <mailto:nek5000-users at lists.>____mcs.anl.gov <http://mcs.anl.gov>
>
>                  <mailto:nek5000-users at lists.__mcs.anl.gov <mailto:nek5000-users at lists.mcs.anl.gov>>> wrote:
>
>                           Hi All,
>
>                           I am trying to convert cubit mesh to .h5m using MOAB (mbconvert blah.cub blah.h5m), but I get
>         this error
>
>                           Element ids are not contiguous!
>                           Failed to load "pipe.cub".
>                           Error code: MB_INDEX_OUT_OF_RANGE (1)
>                           Error message: No sparse tag CATEGORY value for Vertex 1
>
>                           I don't know what is the problem, does anybody can help in this problem. FYI, I used Trelis to
>         make a
>                  mesh, is there
>                           anything wrong with my geometry or mesh?
>
>                           Thanks,
>                           Ami
>
>
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>                                     Tim Tautges            Argonne National Laboratory
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>                            Tim Tautges            Argonne National Laboratory
>                        (tautges at mcs.anl.gov <mailto:tautges at mcs.anl.gov> <mailto:tautges at mcs.anl.gov
>         <mailto:tautges at mcs.anl.gov>>)      (telecommuting from UW-Madison)
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>     "You will keep in perfect peace him whose mind is
>        steadfast, because he trusts in you."               Isaiah 26:3
>
>                   Tim Tautges            Argonne National Laboratory
>               (tautges at mcs.anl.gov <mailto:tautges at mcs.anl.gov>)      (telecommuting from UW-Madison)
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-- 
================================================================
"You will keep in perfect peace him whose mind is
   steadfast, because he trusts in you."               Isaiah 26:3

              Tim Tautges            Argonne National Laboratory
          (tautges at mcs.anl.gov)      (telecommuting from UW-Madison)
  phone (gvoice): (608) 354-1459      1500 Engineering Dr.
             fax: (608) 263-4499      Madison, WI 53706



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