[Nek5000-users] Nek5000-users Digest, Vol 50, Issue 6

nek5000-users at lists.mcs.anl.gov nek5000-users at lists.mcs.anl.gov
Thu Apr 18 20:17:04 CDT 2013


Paul,

Thanks for your help; both of these worked...  Last real machine I ran 
on was a Cray YMP, so I'm learning a lot about MPI.  I ended up 
installing MPI on an SMP machine; compiled NEK for MPI with the 
wrappers; and ran it on multiple cores.  I assume not quite as good as 
OpenMP, but worked great for my purposes...

Thanks,
Murph



On 4/16/2013 1:00 PM, nek5000-users-request at lists.mcs.anl.gov wrote:
> On Mon, Apr 15, 2013 at 11:14 AM, <nek5000-users at lists.mcs.anl.gov 
> <mailto:nek5000-users at lists.mcs.anl.gov>> wrote:
>
>
>     Hi Murph,
>
>     A couple of options here:
>
>     1) Try recompiling with  G = "-mcmodel=medium" in makenek.
>
>     2) Use more than one core so that lelt can remain the same
>        but lelg can be as large as lelt*P, where P is the number
>        of cores you'd like to use.
>
>     Raw email is the standard interface as far as I know...
>
>     hth,
>
>     Paul
>
>
>     On Mon, 15 Apr 2013, nek5000-users at lists.mcs.anl.gov
>     <mailto:nek5000-users at lists.mcs.anl.gov> wrote:
>
>         Hi All,
>
>         Trying to run some initial test cases of a problems I'm
>         working on:
>         - Currently on single node (SMP Linux)
>         - MPI turned off (IFMPI="false")
>         - DOF at 5 (lx1=6, lxd=9, lelx=8)
>
>         If I run with lp=1,lelt=2160, lelg=2160, for a 12x12x15 mesh,
>         it compiles and runs fine.
>
>         If I up it to lp=1,lelt=4500,lelg=4500, for a 15x15x20 mesh,
>         it crashes the compile with:
>
>         obj/drive2.o: In function `plan4_vol_':
>         drive2.f:(.text+0x82f): relocation truncated to fit:
>         R_X86_64_32S against symbol `scrvh_' defined in COMMON section
>         in obj/hsmg.o
>         drive2.f:(.text+0x837): relocation truncated to fit:
>         R_X86_64_32S against symbol `scrvh_' defined in COMMON section
>         in obj/hsmg.o
>         obj/drive2.o: In function `plan3_vol_':
>         drive2.f:(.text+0xac5): relocation truncated to fit:
>         R_X86_64_32S against symbol `scrvh_' defined in COMMON section
>         in obj/hsmg.o
>         drive2.f:(.text+0xacd): relocation truncated to fit:
>         R_X86_64_32S against symbol `scrvh_' defined in COMMON section
>         in obj/hsmg.o
>         obj/drive2.o: In function `plan2_vol_':
>         drive2.f:(.text+0xeb8): relocation truncated to fit:
>         R_X86_64_32S against symbol `scrvh_' defined in COMMON section
>         in obj/hsmg.o
>         drive2.f:(.text+0xec0): relocation truncated to fit:
>         R_X86_64_32S against symbol `scrvh_' defined in COMMON section
>         in obj/hsmg.o
>         obj/drive2.o: In function `dofcnt_':
>         drive2.f:(.text+0x170f): relocation truncated to fit:
>         R_X86_64_PC32 against symbol `scrns_' defined in COMMON
>         section in obj/convect.o
>         obj/drive2.o: In function `settime_':
>         drive2.f:(.text+0x7cc9): relocation truncated to fit:
>         R_X86_64_PC32 against symbol `cprint_' defined in COMMON
>         section in obj/navier1.o
>         drive2.f:(.text+0x7cef): relocation truncated to fit:
>         R_X86_64_PC32 against symbol `cprint_' defined in COMMON
>         section in obj/navier1.o
>         drive2.f:(.text+0x7d02): relocation truncated to fit:
>         R_X86_64_PC32 against symbol `cprint_' defined in COMMON
>         section in obj/navier1.o
>         obj/plan4.o: In function `crespsp_':
>         plan4.f:(.text+0xb23): additional relocation overflows omitted
>         from the output
>         collect2: ld returned 1 exit status
>         make: *** [nek5000] Error 1
>
>         Just wondering if this is due to a true limit with the
>         platform/word size, or if I'm screwing something up...
>
>         Thanks,
>         Murph
>
>         PS - Is there any other interface to this list other than raw
>         email?
>
>
>
>         -- 
>
>         *Murphy Leo O'Dea, PE"Murph"*
>
>         PhD Student, Mechanical Engineering
>
>         /School Of Engineering And Computer Science/
>
>         /Oakland University/
>
>         mlodea at oakland.edu <mailto:mlodea at oakland.edu>
>         <mailto:mlodea at oakland.edu <mailto:mlodea at oakland.edu>>
>
>         http://www.secs.oakland.edu/~mlodea/
>         <http://www.secs.oakland.edu/%7Emlodea/>
>

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