[Nek5000-users] Error when running the vortex problem

Tue Oct 11 16:47:56 CDT 2011

Shouldn't it be param(67)?

Justin

On Tue, Oct 11, 2011 at 2:03 PM, <nek5000-users at lists.mcs.anl.gov> wrote:

>
>
> Hi Dong,
>
> For some reason, your run is traversing the .f00000 file format
> branch, rather than the .fld input branch.
>
> This traversal is generally controlled by setting param(66)=4 (for .fld) in
> usrdat2 (or usrdat) in the .usr file.
>
> I'm wondering if you are compiling with r1854.usr provided in
> the examples/vortex directory?
>
>
> Paul
>
> On Tue, 11 Oct 2011, nek5000-users at lists.mcs.anl.**gov<nek5000-users at lists.mcs.anl.gov>wrote:
>
>
>> Hi Dong,
>>
>> What kind of platform are you running on?
>>
>> Can you do an svn update in the example directory, just in case
>> the file was contaminated on transfer?
>>
>> Paul
>>
>> On Tue, 11 Oct 2011, nek5000-users at lists.mcs.anl.**gov<nek5000-users at lists.mcs.anl.gov>wrote:
>>
>>  Hi, Stefan.
>>> Sure. Attached is the log file.
>>>
>>> -Dong
>>>
>>> -----Original Message-----
>>> From: nek5000-users-bounces at lists.**mcs.anl.gov<nek5000-users-bounces at lists.mcs.anl.gov>[mailto:
>>> nek5000-users-bounces@**lists.mcs.anl.gov<nek5000-users-bounces at lists.mcs.anl.gov>]
>>> On Behalf Of nek5000-users at lists.mcs.anl.**gov<nek5000-users at lists.mcs.anl.gov>
>>> Sent: Tuesday, October 11, 2011 2:15 PM
>>> To: nek5000-users at lists.mcs.anl.**gov <nek5000-users at lists.mcs.anl.gov>
>>> Subject: Re: [Nek5000-users] Error when running the vortex problem
>>>
>>> Please post a full log file. Note the file size is limited to 100KB.
>>> -Stefan
>>>
>>> On 10/11/11, S K <stgeke at googlemail.com> wrote:
>>>
>>>> Hi Dong,
>>>>
>>>> It works for me. Did you change anything?
>>>>
>>>> -Stefan
>>>>
>>>> On 10/11/11, nek5000-users at lists.mcs.anl.**gov<nek5000-users at lists.mcs.anl.gov>
>>>> <nek5000-users at lists.mcs.anl.**gov <nek5000-users at lists.mcs.anl.gov>>
>>>> wrote:
>>>>
>>>>> Hi,
>>>>> I was trying to run nek5000 with vortex, following the default user
>>>>> setting.
>>>>> There is no problem for building, however when I start to run the
>>>>> application, there is an error "NONSTD HDR, parse_hdr, abort". The
>>>>> following
>>>>> is the related error report.
>>>>>
>>>>> Reading checkpoint data
>>>>>       0       0 OPEN: r1492_n08.fld27
>>>>> byte swap: T   0.000000       0.000000
>>>>> 140   8   8   8 5.0101000E+0250101 U P                             4
>>>>> NELT,NX,N
>>>>> ÃºaÃ@^@^@^@^@^@^@^@^@^@^@^@^@^**@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^**
>>>>> @^@^@^@^@@^@^@^@^@^@^@^@^@^@^@**^@^@^@^@^@
>>>>>
>>>>>                          NONSTD HDR, parse_hdr, abort.
>>>>>
>>>>> I briefly read the code. It looks like the code is reading the
>>>>> checkpoint
>>>>> file "r1492_n08.fld27" and there is something wrong with the file
>>>>> header.
>>>>> The file header does not follow the standard format and the code cannot
>>>>> understand the file.
>>>>>
>>>>> How can I solve this problem?
>>>>>
>>>>> Thank you.
>>>>>
>>>>> -Dong
>>>>>
>>>>>
>>>>  ______________________________**_________________
>>> Nek5000-users mailing list
>>> Nek5000-users at lists.mcs.anl.**gov <Nek5000-users at lists.mcs.anl.gov>
>>> https://lists.mcs.anl.gov/**mailman/listinfo/nek5000-users<https://lists.mcs.anl.gov/mailman/listinfo/nek5000-users>
>>>
>>
>>
>
> On Tue, 11 Oct 2011, nek5000-users at lists.mcs.anl.**gov<nek5000-users at lists.mcs.anl.gov>wrote:
>
>  Hi, Stefan.
>> Sure. Attached is the log file.
>>
>> -Dong
>>
>> -----Original Message-----
>> From: nek5000-users-bounces at lists.**mcs.anl.gov<nek5000-users-bounces at lists.mcs.anl.gov>[mailto:
>> nek5000-users-bounces@**lists.mcs.anl.gov<nek5000-users-bounces at lists.mcs.anl.gov>]
>> On Behalf Of nek5000-users at lists.mcs.anl.**gov<nek5000-users at lists.mcs.anl.gov>
>> Sent: Tuesday, October 11, 2011 2:15 PM
>> To: nek5000-users at lists.mcs.anl.**gov <nek5000-users at lists.mcs.anl.gov>
>> Subject: Re: [Nek5000-users] Error when running the vortex problem
>>
>> Please post a full log file. Note the file size is limited to 100KB.
>> -Stefan
>>
>> On 10/11/11, S K <stgeke at googlemail.com> wrote:
>>
>>> Hi Dong,
>>>
>>> It works for me. Did you change anything?
>>>
>>> -Stefan
>>>
>>> On 10/11/11, nek5000-users at lists.mcs.anl.**gov<nek5000-users at lists.mcs.anl.gov>
>>> <nek5000-users at lists.mcs.anl.**gov <nek5000-users at lists.mcs.anl.gov>>
>>> wrote:
>>>
>>>> Hi,
>>>> I was trying to run nek5000 with vortex, following the default user
>>>> setting.
>>>> There is no problem for building, however when I start to run the
>>>> application, there is an error "NONSTD HDR, parse_hdr, abort". The
>>>> following
>>>> is the related error report.
>>>>
>>>> Reading checkpoint data
>>>>       0       0 OPEN: r1492_n08.fld27
>>>> byte swap: T   0.000000       0.000000
>>>> 140   8   8   8 5.0101000E+0250101 U P                             4
>>>> NELT,NX,N
>>>> ÃºaÃ@^@^@^@^@^@^@^@^@^@^@^@^@^**@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^**
>>>> @^@^@^@^@@^@^@^@^@^@^@^@^@^@^@**^@^@^@^@^@
>>>>
>>>>                          NONSTD HDR, parse_hdr, abort.
>>>>
>>>> I briefly read the code. It looks like the code is reading the
>>>> checkpoint
>>>> file "r1492_n08.fld27" and there is something wrong with the file
>>>> header.
>>>> The file header does not follow the standard format and the code cannot
>>>> understand the file.
>>>>
>>>> How can I solve this problem?
>>>>
>>>> Thank you.
>>>>
>>>> -Dong
>>>>
>>>>
>>>  ______________________________**_________________
>> Nek5000-users mailing list
>> Nek5000-users at lists.mcs.anl.**gov <Nek5000-users at lists.mcs.anl.gov>
>> https://lists.mcs.anl.gov/**mailman/listinfo/nek5000-users<https://lists.mcs.anl.gov/mailman/listinfo/nek5000-users>
>>
>
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