[Nek5000-users] Running Simulations in Parallel with nekbmpi
nek5000-users at lists.mcs.anl.gov
nek5000-users at lists.mcs.anl.gov
Wed May 11 13:55:03 CDT 2011
John,
Did you compile Nek5000 with MPI support (IFMPI=true in makenek)?
-Stefan
On 5/11/11, nek5000-users at lists.mcs.anl.gov
<nek5000-users at lists.mcs.anl.gov> wrote:
> Hey John,
>
> Just a initial thought, but have you set "lp" in the SIZE file to 2?
>
> Josh
>
> On Wed, May 11, 2011 at 1:44 PM, <nek5000-users at lists.mcs.anl.gov> wrote:
>> Hello,
>>
>> I recently built nek on a new machine with an Intel i7. I think I have
>> all
>> the necessary libraries and packages installed but it looks like nek is
>> trying to run 4 processors in series when I use nekbmpi. Has anyone
>> experienced a similar problem? Below is the header of my logfile for a
>> case
>> where I tried running with two processors.
>>
>>
>> Thanks,
>>
>> John
>>
>> /----------------------------------------------------------\\
>> | _ __ ______ __ __ ______ ____ ____ ____ |
>> | / | / // ____// //_/ / ____/ / __ \\ / __ \\ / __ \\ |
>> | / |/ // __/ / ,< /___ \\ / / / // / / // / / / |
>> | / /| // /___ / /| | ____/ / / /_/ // /_/ // /_/ / |
>> | /_/ |_//_____//_/ |_|/_____/ \\____/ \\____/ \\____/ |
>> | |
>> |----------------------------------------------------------|
>> | |
>> | NEK5000: Open Source Spectral Element Solver |
>> | COPYRIGHT (c) 2008-2010 UCHICAGO ARGONNE, LLC |
>> | Version: 1.0rc1 / SVN r684 |
>> | Web: http://nek5000.mcs.anl.gov |
>> | |
>> \\----------------------------------------------------------/
>>
>>
>> Number of processors: 1
>> REAL wdsize : 8
>> INTEGER wdsize : 4
>> /----------------------------------------------------------\\
>> | _ __ ______ __ __ ______ ____ ____ ____ |
>> | / | / // ____// //_/ / ____/ / __ \\ / __ \\ / __ \\ |
>> | / |/ // __/ / ,< /___ \\ / / / // / / // / / / |
>> | / /| // /___ / /| | ____/ / / /_/ // /_/ // /_/ / |
>> | /_/ |_//_____//_/ |_|/_____/ \\____/ \\____/ \\____/ |
>> | |
>> |----------------------------------------------------------|
>> | |
>> | NEK5000: Open Source Spectral Element Solver |
>> | COPYRIGHT (c) 2008-2010 UCHICAGO ARGONNE, LLC |
>> | Version: 1.0rc1 / SVN r684 |
>> | Web: http://nek5000.mcs.anl.gov |
>> | |
>> \\----------------------------------------------------------/
>>
>>
>> Number of processors: 1
>> REAL wdsize : 8
>> INTEGER wdsize : 4
>>
>>
>> Beginning session:
>>
>> /home/akerleyj/repos/nek5_svn/research/flatchan_Re1600/fc1d.rea
>>
>>
>> timer accuracy: 0.0000000E+00 sec
>>
>> read .rea file
>> nelgt/nelgv/lelt: 1510 1510 1600
>> lx1 /lx2 /lx3 : 8 8 8
>>
>> mapping elements to processors
>>
>>
>> _______________________________________________
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>> Nek5000-users at lists.mcs.anl.gov
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>>
>>
>
>
>
> --
> Josh Camp
>
> "All that is necessary for the triumph of evil is that good men do
> nothing" -- Edmund Burke
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