[Nek5000-users] compilation, large memory

nek5000-users at lists.mcs.anl.gov nek5000-users at lists.mcs.anl.gov
Fri Apr 23 07:06:52 CDT 2010


Hello all,

I am having a problem compiling on an x86_64 system.  Smaller problems
work fine.  My SIZE file starts out with:
 
      parameter (ldim=3)
      parameter (lx1=6*4,ly1=lx1,lz1=lx1,lelt=120,lelv=lelt)
      parameter (lxd=9*4,lyd=lxd,lzd=lxd)

The error message is:

/home/fmuldoo/programs/mpich2-1.2.1p1-intel/bin/mpif77 -mcmodel=medium
-shared-intel -c  -O2 -r8 -fpconstant -fpp -DMPI -DLONGINT8
-I/home/fmuldoo/programs/nek5000/nek5/trunk/nek
-I/data/fmuldoo/engineering-marangoni-flows/sim2/sim1/sim1/sim7/AR-.66-RE-1800-PR-04.0-dt-6.0e-5-time-006.0-grid-3-Intel /data/fmuldoo/engineering-marangoni-flows/sim2/sim1/sim1/sim7/AR-.66-RE-1800-PR-04.0-dt-6.0e-5-time-006.0-grid-3-Intel/delet.f -o delet.o 
/home/fmuldoo/programs/mpich2-1.2.1p1-intel/bin/mpif77 -mcmodel=medium
-shared-intel -o nek5000  delet.o drive.o drive1.o drive2.o plan4.o
bdry.o coef.o conduct.o connect1.o connect2.o dssum.o edgec.o eigsolv.o
gauss.o genxyz.o navier1.o navier0.o navier2.o navier3.o navier4.o
prepost.o speclib.o map2.o turb.o mvmesh.o ic.o ssolv.o planx.o math.o
mxm_wrapper.o hmholtz.o gfdm_par.o  gfdm_op.o gfdm_solve.o subs1.o
subs2.o genbox.o gmres.o hsmg.o convect.o induct.o perturb.o navier5.o
navier6.o navier7.o navier8.o fast3d.o fasts.o calcz.o byte.o chelpers.o
byte_mpi.o postpro.o cvode_driver.o cvode_aux.o setprop.o qthermal.o
makeq.o papi.o ssygv.o dsygv.o mxm_std.o blas.o   comm_mpi.o jl2_gs.o
jl2_sort.o jl2_sarray_transfer.o jl2_sarray_sort.o jl2_gs_local.o
jl2_crystal.o jl2_comm.o jl2_tensor.o jl2_fail.o jl2_fcrystal.o
jl_tuple_list.o jl_transfer.o jl_sort.o jl_fcrystal.o jl_errmem.o
jl_crystal.o jl_findpts.o jl_pfindpt.o jl_tensor.o jl_findpt.o jl_poly.o
jl2_sparse_cholesky.o jl2_xxt.o jl2_fcrs.o 
/home/fmuldoo/programs/mpich2-1.2.1p1-intel/lib/libmpich.a(setbotf.o):
In function `mpirinitf_':
setbotf.f:(.text+0xd): relocation truncated to fit: R_X86_64_32 against
symbol `mpipriv1_' defined in COMMON section in comm_mpi.o
setbotf.f:(.text+0x12): relocation truncated to fit: R_X86_64_32 against
symbol `mpipriv1_' defined in COMMON section in comm_mpi.o
setbotf.f:(.text+0x17): relocation truncated to fit: R_X86_64_32 against
symbol `mpipriv1_' defined in COMMON section in comm_mpi.o
setbotf.f:(.text+0x1c): relocation truncated to fit: R_X86_64_32 against
symbol `mpipriv2_' defined in COMMON section in comm_mpi.o
setbotf.f:(.text+0x22): relocation truncated to fit: R_X86_64_32 against
symbol `mpipriv2_' defined in COMMON section in comm_mpi.o
setbotf.f:(.text+0x28): relocation truncated to fit: R_X86_64_32 against
symbol `mpiprivc_' defined in COMMON section in comm_mpi.o
setbotf.f:(.text+0x34): relocation truncated to fit: R_X86_64_32 against
symbol `mpiprivc_' defined in COMMON section in comm_mpi.o
make: *** [nek5000] Error 1




-- 
Frank Herbert Muldoon, Ph.D. Mechanical Engineering
Technische Universität Wien (Technical University of Vienna)
Inst. f. Strömungsmechanik und Wärmeübertragung (Institute of Fluid
Mechanics and Heat Transfer)
Resselgasse 3
1040 Wien
Tel: +4315880132232
Fax: +4315880132299 
Cell:+436765203470
fmuldoo (skype)
http://tetra.fluid.tuwien.ac.at/fmuldoo/public_html/webpage/frank-muldoon.html




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