[mpich-discuss] installation problem on AIX
Eric Sun
eric.sunyy at gmail.com
Thu Mar 8 05:48:00 CST 2012
Jeff,
Thanks! This is an SMP machine and only one user can use this machine at a
time.
On Thu, Mar 8, 2012 at 12:26 AM, Jeff Hammond <jhammond at alcf.anl.gov> wrote:
> Note that _r should be equivalent to *FLAGS+=-qthreaded, should you
> decide that you do not want to force all users of your MPICH2 build to
> use the _r compilers.
>
> Jeff
>
> On Wed, Mar 7, 2012 at 10:40 PM, Eric Sun <eric.sunyy at gmail.com> wrote:
> > Anthony,
> >
> > Changing all compilers to the "_r" version makes the difference. Now I
> can
> > compile my Pi.f90 with no problem! Thank you very much!
> >
> > Now the problem is that when I run the code using "mpiexec -f hostfile
> -n 4
> > Pi.x", there is nothing output. It looks like a hang there. I have
> attached
> > all c.txt, m.txt, mi.txt and config.log files in case you may need them
> for
> > diagnosis.
> >
> > Thanks again!
> >
> >
> > On Wed, Mar 7, 2012 at 10:45 AM, Anthony Chan <chan at mcs.anl.gov> wrote:
> >>
> >>
> >> Send us your configure and make output files as stated in README.
> >> Did you try build mpich2 with _r version of compilers ?
> >>
> >> A.Chan
> >>
> >> ----- Original Message -----
> >> > I configure and make MPICH2 using:
> >> > [bash] export CC=xlc
> >> > [bash] export CXX=xlC
> >> > [bash] export F77=xlf
> >> > [bash] export FC=xlf90
> >> > [bash] ./configure --prefix=/gpfs/small/shared/mpich2/pwr5 --with-
> >> > device=ch3:nemesis
> >> > [bash] make
> >> > [bash] make install
> >> >
> >> > Before I compile my Pi.f90, I did:
> >> > [bash] export PATH=/gpfs/small/shared/mpich2/pwr5/bin:$PATH
> >> >
> >> > Then, to compile my code:
> >> > [bash] mpif90 Pi.f90
> >> >
> >> > Thanks for your help!
> >> >
> >> > On Tue, Mar 6, 2012 at 11:54 PM, Rajeev Thakur <thakur at mcs.anl.gov>
> >> > wrote:
> >> >
> >> > > What exact options did you pass to configure, and how exactly are
> >> > > you
> >> > > compiling your program?
> >> > >
> >> > > On Mar 6, 2012, at 10:41 PM, Eric Sun wrote:
> >> > >
> >> > > > Just tried. It didn't work ... The same error.
> >> > > >
> >> > > > On Tue, Mar 6, 2012 at 11:10 PM, Rajeev Thakur
> >> > > > <thakur at mcs.anl.gov>
> >> > > wrote:
> >> > > > Try giving the full path to mpif90.
> >> > > >
> >> > > > On Mar 6, 2012, at 9:51 PM, Eric Sun wrote:
> >> > > >
> >> > > > > Thanks for your quick reply!
> >> > > > >
> >> > > > > Yes. But, I also tried "mpif77" and got the same error.
> >> > > > >
> >> > > > >
> >> > > > > On Tue, Mar 6, 2012 at 10:33 PM, Dave Goodell
> >> > > > > <goodell at mcs.anl.gov>
> >> > > wrote:
> >> > > > > Are you building your application with "mpif90"?
> >> > > > >
> >> > > > > -Dave
> >> > > > >
> >> > > > > On Mar 6, 2012, at 9:15 PM CST, Eric Sun wrote:
> >> > > > >
> >> > > > > > Dear MPICH2 developers and users,
> >> > > > > >
> >> > > > > > I successfully installed mpich2-1.4.1p1 on an IBM Power5 SMP
> >> > > > > > machine
> >> > > running AIX system. The configure line was
> >> > > > > > ./configure --prefix=/install/directory
> >> > > > > > --with-device=ch3:nemesis
> >> > > > > >
> >> > > > > > I had CC=xlc CXX=xlC F77=xlf FC=xlf90
> >> > > > > >
> >> > > > > > "configure" and "make" are quite smooth without error. But
> >> > > > > > when I
> >> > > try to compile a testing MPI code (calculating Pi), I receive the
> >> > > following
> >> > > error message:
> >> > > > > >
> >> > > > > > ** main === End of Compilation 1 ===
> >> > > > > > 1501-510 Compilation successful for file Pi.f90.
> >> > > > > > ld: 0711-317 ERROR: Undefined symbol: .mpi_init
> >> > > > > > ld: 0711-317 ERROR: Undefined symbol: .mpi_comm_rank
> >> > > > > > ld: 0711-317 ERROR: Undefined symbol: .mpi_comm_size
> >> > > > > > ld: 0711-317 ERROR: Undefined symbol: .mpi_type_contiguous
> >> > > > > > ld: 0711-317 ERROR: Undefined symbol: .mpi_type_commit
> >> > > > > > ld: 0711-317 ERROR: Undefined symbol: .mpi_send
> >> > > > > > ld: 0711-317 ERROR: Undefined symbol: .mpi_recv
> >> > > > > > ld: 0711-317 ERROR: Undefined symbol: .mpi_finalize
> >> > > > > >
> >> > > > > > Any suggestion?
> >> > > > > >
> >> > > > > > Thanks!
> >> > > > > > _______________________________________________
> >> > > > > > mpich-discuss mailing list mpich-discuss at mcs.anl.gov
> >> > > > > > To manage subscription options or unsubscribe:
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> >> > > > >
> >> > > > > _______________________________________________
> >> > > > > mpich-discuss mailing list mpich-discuss at mcs.anl.gov
> >> > > > > To manage subscription options or unsubscribe:
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> >> > > > >
> >> > > > >
> >> > > > >
> >> > > > > --
> >> > > > > Yiyang Sun
> >> > > > > Department of Physics, Applied Physics, and Astronomy
> >> > > > > Rensselaer Polytechnic Institute
> >> > > > > Troy, NY 12180, USA
> >> > > > > _______________________________________________
> >> > > > > mpich-discuss mailing list mpich-discuss at mcs.anl.gov
> >> > > > > To manage subscription options or unsubscribe:
> >> > > > > https://lists.mcs.anl.gov/mailman/listinfo/mpich-discuss
> >> > > >
> >> > > > _______________________________________________
> >> > > > mpich-discuss mailing list mpich-discuss at mcs.anl.gov
> >> > > > To manage subscription options or unsubscribe:
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> >> > > >
> >> > > >
> >> > > >
> >> > > > --
> >> > > > Yiyang Sun
> >> > > > Department of Physics, Applied Physics, and Astronomy
> >> > > > Rensselaer Polytechnic Institute
> >> > > > Troy, NY 12180, USA
> >> > > > _______________________________________________
> >> > > > mpich-discuss mailing list mpich-discuss at mcs.anl.gov
> >> > > > To manage subscription options or unsubscribe:
> >> > > > https://lists.mcs.anl.gov/mailman/listinfo/mpich-discuss
> >> > >
> >> > > _______________________________________________
> >> > > mpich-discuss mailing list mpich-discuss at mcs.anl.gov
> >> > > To manage subscription options or unsubscribe:
> >> > > https://lists.mcs.anl.gov/mailman/listinfo/mpich-discuss
> >> > >
> >> >
> >> >
> >> >
> >> > --
> >> > Yiyang Sun
> >> > Department of Physics, Applied Physics, and Astronomy
> >> > Rensselaer Polytechnic Institute
> >> > Troy, NY 12180, USA
> >> >
> >> > _______________________________________________
> >> > mpich-discuss mailing list mpich-discuss at mcs.anl.gov
> >> > To manage subscription options or unsubscribe:
> >> > https://lists.mcs.anl.gov/mailman/listinfo/mpich-discuss
> >> _______________________________________________
> >> mpich-discuss mailing list mpich-discuss at mcs.anl.gov
> >> To manage subscription options or unsubscribe:
> >> https://lists.mcs.anl.gov/mailman/listinfo/mpich-discuss
> >
> >
> >
> >
> > --
> > Yiyang Sun
> > Department of Physics, Applied Physics, and Astronomy
> > Rensselaer Polytechnic Institute
> > Troy, NY 12180, USA
> >
> > _______________________________________________
> > mpich-discuss mailing list mpich-discuss at mcs.anl.gov
> > To manage subscription options or unsubscribe:
> > https://lists.mcs.anl.gov/mailman/listinfo/mpich-discuss
> >
>
>
>
> --
> Jeff Hammond
> Argonne Leadership Computing Facility
> University of Chicago Computation Institute
> jhammond at alcf.anl.gov / (630) 252-5381
> http://www.linkedin.com/in/jeffhammond
> https://wiki.alcf.anl.gov/old/index.php/User:Jhammond
> https://wiki-old.alcf.anl.gov/index.php/User:Jhammond
> _______________________________________________
> mpich-discuss mailing list mpich-discuss at mcs.anl.gov
> To manage subscription options or unsubscribe:
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>
--
Yiyang Sun
Department of Physics, Applied Physics, and Astronomy
Rensselaer Polytechnic Institute
Troy, NY 12180, USA
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