[mpich-discuss] MPI_Bsend
Dave Goodell
goodell at mcs.anl.gov
Thu Nov 10 14:34:59 CST 2011
I don't think that's right, Jim. I'm pretty sure that the size you pass MPI_Buffer_attach is supposed to be the actual size of the corresponding buffer.
The MPI_BSEND_OVERHEAD is a per-entry overhead, so you would need to add 4*MPI_BSEND_OVERHEAD in this case because you want 4 messages to be buffered. Again, please read the relevant section of the MPI 2.2 standard.
-Dave
On Nov 10, 2011, at 2:27 PM CST, James Dinan wrote:
> I think you want:
>
> MPI_Buffer_attach(malloc(bufsize), bufsize - MPI_BSEND_OVERHEAD);
>
> Best,
> ~Jim.
>
> On 11/10/11 2:17 PM, Wei-keng Liao wrote:
>> Thanks, Dave and Paven,
>>
>> Is this MPI_BSEND_OVERHEAD additional size per send call?
>>
>> I add that to the buffer size, but still got the same error.
>> Since I am using MPI_BYTE, I guess I don't need to call MPI_Pack_size().
>>
>> bufsize = 1024*4;
>> bufsize += MPI_BSEND_OVERHEAD;
>> MPI_Buffer_attach(malloc(bufsize), bufsize);
>>
>>
>>
>> Wei-keng
>>
>>
>> On Nov 10, 2011, at 1:37 PM, Dave Goodell wrote:
>>
>>> You need to add MPI_BSEND_OVERHEAD to your buffer size. This is an upper bound on the amount of space that the MPI implementation will internally use from your buffer. So if you want to guarantee that X bytes will be successfully buffered by the library then you need to attach a buffer of size X+MPI_BSEND_OVERHEAD. Officially you are supposed to use MPI_Pack_size too, although I'm not sure if that's required in practical implementations.
>>>
>>> See MPI-2.2, pages 47-48.
>>>
>>> -Dave
>>>
>>> On Nov 10, 2011, at 1:30 PM CST, Wei-keng Liao wrote:
>>>
>>>> My program using MPI_Bsend failed due to insufficient space,
>>>> even though it did allocate exact size required, but not one byte more.
>>>> I wonder if this is an mpich bug, or MPI requires more space than needed.
>>>> If it is later, how much more is needed?
>>>>
>>>> Wei-keng
>>>>
>>>> error message:
>>>> $ mpiexec -machinefile=machinefile -l -n 4 a.out
>>>> [2] Fatal error in MPI_Bsend: Invalid buffer pointer, error stack:
>>>> [2] MPI_Bsend(182).......: MPI_Bsend(buf=0x7fff81048a50, count=1024, MPI_BYTE, dest=0, tag=2, MPI_COMM_WORLD) failed
>>>> [2] MPIR_Bsend_isend(318): Insufficient space in Bsend buffer; requested 1024; total buffer size is 4096
>>>>
>>>> ---- bsend.c -----------------------------
>>>> #include<stdio.h>
>>>> #include<stdlib.h>
>>>> #include<mpi.h>
>>>>
>>>> int main(int argc, char **argv)
>>>> {
>>>> int i, rank, nprocs, src, bufsize;
>>>> char buf[1024];
>>>> void *bsend_buf = NULL;
>>>> MPI_Status status;
>>>>
>>>> MPI_Init(&argc,&argv);
>>>> MPI_Comm_rank(MPI_COMM_WORLD,&rank);
>>>> MPI_Comm_size(MPI_COMM_WORLD,&nprocs);
>>>>
>>>> bufsize = 1024*4;
>>>> // bufsize += 512; // if uncommented, the program runs successfully
>>>> MPI_Buffer_attach(malloc(bufsize), bufsize);
>>>>
>>>> for (i=0; i<4; i++) {
>>>> if (rank> 0)
>>>> MPI_Bsend(buf, 1024, MPI_BYTE, 0, rank, MPI_COMM_WORLD);
>>>> else {
>>>> for (src=1; src<nprocs; src++)
>>>> MPI_Recv(buf, 1024, MPI_BYTE, src, src, MPI_COMM_WORLD,&status);
>>>> }
>>>> }
>>>>
>>>> MPI_Buffer_detach(&bsend_buf,&bufsize);
>>>> free(bsend_buf);
>>>> MPI_Finalize();
>>>> return 0;
>>>> }
>>>>
>>>>
>>>>
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