[mpich-discuss] Fatal error in PMPI_Comm_rank

[Rajeev Thakur]

Make sure your mpiexec is also from the same place; i.e. look in the test_parallelmesh script and give the full path if necessary.

On Feb 25, 2011, at 10:18 AM, Hong-Jun Kim wrote:

> Thanks for your reply.
> 
> However, I am using "mpicxx" to build my program and it is coming from the right place as in the following build command line.
> 
> -----------------------------
> /home/hongjun/lib/mpich2-1.3.2p1/bin/mpicxx -pipe -Wall -g -o
> test_parallelmesh test_parallelmesh-test_parallelmesh.o -L/home/hongjun/lib/CGM/lib -L/home/hongjun/lib/OpenCASCADE6.3.0/lib -L/home/hongjun/lib/mpich2-1.3.2p1/lib -L/usr/lib/gc c/x86_64-redhat-linux/4.1.2 -L/usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../.. /lib64 -L/lib/../lib64 -L/usr/lib/../lib64
> -----------------------------
> 
> Actually, this program worked for me before, so I have no idea why this problem is coming now.
> 
> -----------------------------
> Hong-Jun Kim
> Post-doc researcher
> MCS, Argonne National Laboratory
> 9700 S. Cass Ave. B240/R2147
> Argonne, IL 60439
> 630-252-4791
> hongjun at mcs.anl.gov
> -----------------------------
> 
> ----- Original Message -----
>> From: "Darius Buntinas" <buntinas at mcs.anl.gov>
>> To: mpich-discuss at mcs.anl.gov
>> Sent: Thursday, February 24, 2011 9:11:16 PM
>> Subject: Re: [mpich-discuss] Fatal error in PMPI_Comm_rank
>> It looks like you might have compiled using an mpi.h of another MPI
>> implementation. Make sure you use the compiler wrappers (e.g., mpicc)
>> instead of using gcc directly. This will make sure that the correct
>> header files are used. Also, you should check to make sure the mpicc
>> you're using is from the correct MPI implementation too (i.e., "which
>> mpicc").
>> 
>> -d
>> 
>> On Feb 24, 2011, at 7:29 PM, Hong-Jun Kim wrote:
>> 
>>> Hello,
>>> 
>>> I compiled my program with "mpich2-1.3.2p1" without any problems as
>>> at the end of this e-mail.
>>> But, if I execute it, I have some errors I can not understand as
>>> follows.
>>> Could any body give me any advice about this problem?
>>> Thanks.
>>> 
>>> -------------------------------------------
>>> [hongjun at login01 algs]$ ./test_parallelmesh
>>> Fatal error in PMPI_Comm_rank: Invalid communicator, error stack:
>>> PMPI_Comm_rank(109): MPI_Comm_rank(comm=0x0, rank=0x7fffde36da34)
>>> failed
>>> PMPI_Comm_rank(66).: Invalid communicator
>>> [hongjun at login01 algs]$ mpiexec -l -n 2 ./test_parallelmesh
>>> 0: Fatal error in PMPI_Comm_rank: Invalid communicator, error stack:
>>> 0: PMPI_Comm_rank(109): MPI_Comm_rank(comm=0x0, rank=0x7fffee4e1464)
>>> failed
>>> 0: PMPI_Comm_rank(66).: Invalid communicator
>>> 1: Fatal error in PMPI_Comm_rank: Invalid communicator, error stack:
>>> 1: PMPI_Comm_rank(109): MPI_Comm_rank(comm=0x0, rank=0x7fff6055a9c4)
>>> failed
>>> 1: PMPI_Comm_rank(66).: Invalid communicator
>>> rank 1 in job 98 login01.cosmea.mcs.anl.gov_58699 caused collective
>>> abort of
>>> all ranks
>>> exit status of rank 1: return code 1
>>> -------------------------------------------
>>> -----------------------------
>>> /home/hongjun/lib/mpich2-1.3.2p1/bin/mpicxx -pipe -Wall -g -o
>>> test_parallelmesh
>>> test_parallelmesh-test_parallelmesh.o -L/home/hongjun/lib/CGM/lib
>>> -L/home/hongj
>>> un/lib/OpenCASCADE6.3.0/lib -L/home/hongjun/lib/mpich2-1.3.2p1/lib
>>> -L/usr/lib/gc
>>> c/x86_64-redhat-linux/4.1.2
>>> -L/usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../..
>>> /lib64 -L/lib/../lib64 -L/usr/lib/../lib64
>>> ../../src/.libs/libMeshKit.a -L/home/
>>> hongjun/lib/Lasso/lib -L/home/hongjun/lib/MOAB/lib
>>> -L/home/hongjun/lib/camal.5.1
>>> .0-Linux64/lib/Linux64 ../../camal/.libs/libMKcamal.a
>>> -lCMLEdgeMesher -lCMLTet -
>>> lCMLSweep -lCMLDelTri -lCMLTri -lCMLSurfMapper -lCMLPave -lCMLSizer
>>> -lc -lgcc_s
>>> -lmpichcxx -lmpich -lrt -lstdc++
>>> /home/hongjun/lib/mpich2-1.3.2p1/lib/libopa.so
>>> -lpthread /home/hongjun/lib/mpich2-1.3.2p1/lib/libmpl.so -ldl
>>> /home/hongjun/lib/
>>> Lasso/lib/libiRel.a /home/hongjun/lib/CGM/lib/libiGeom.a
>>> /home/hongjun/lib/MOAB/
>>> lib/libiMesh.a /home/hongjun/lib/MOAB/lib/libMOAB.a
>>> /home/hongjun/lib/CGM/lib/li
>>> bcgm.a /home/hongjun/lib/OpenCASCADE6.3.0/lib/libTKSTL.so
>>> /home/hongjun/lib/Open
>>> CASCADE6.3.0/lib/libTKSTEP.so -lm -Wl,--rpath
>>> -Wl,/home/hongjun/lib/mpich2-1.3.2p1/lib -Wl,--rpath -Wl,/home/h
>>> ongjun/lib/OpenCASCADE6.3.0/lib -Wl,--rpath
>>> -Wl,/home/hongjun/lib/mpich2-1.3.2p1
>>> /lib -Wl,--rpath -Wl,/home/hongjun/lib/OpenCASCADE6.3.0/lib
>>> -----------------------------
>>> 
>>> 
>>> 
>>> -----------------------------
>>> Hong-Jun Kim
>>> Post-doc researcher
>>> MCS, Argonne National Laboratory
>>> 9700 S. Cass Ave. B240/R2147
>>> Argonne, IL 60439
>>> 630-252-4791
>>> hongjun at mcs.anl.gov
>>> -----------------------------
>>> 
>>> _______________________________________________
>>> mpich-discuss mailing list
>>> mpich-discuss at mcs.anl.gov
>>> https://lists.mcs.anl.gov/mailman/listinfo/mpich-discuss
>> 
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