[mpich-discuss] try to install MPICH2 on SGI under local account

Wed May 26 19:46:40 CDT 2010

For the use of MPICH, I just use the scriptted file of configure and Makefile coming with the research model I have been using.
So I really do not know the details of how they compile and link the model with MPICH. There is just an option to choose -spmd while I was configuring my research model.

That's why I guess it's the version of MPI problem not how we link mpi and the model. So as I said before only MPICH2-1.0.7 can be installed correctly under my local account; but when I build the model, it complains about MPI library.

Right now I have a question: do you think it will be successful to install newer MPICH with an administrative access ?  Then I can test the model with new MPI

Thanks for any advice or suggestion.

Rui
________________________________________
From: mpich-discuss-bounces at mcs.anl.gov [mpich-discuss-bounces at mcs.anl.gov] On Behalf Of Anthony Chan [chan at mcs.anl.gov]
Sent: Tuesday, May 25, 2010 1:26 PM
To: mpich-discuss at mcs.anl.gov
Subject: Re: [mpich-discuss] try to install MPICH2 on SGI under local account

You should use the MPI wrappers, mpicc/mpif90, to compile and link your program.
That should avoid any missing library like -lpthread shown here.

A.Chan

----- "Rui Mei" <rum06003 at engr.uconn.edu> wrote:

> I just tired MPICH2-1.0.7. It works well on that machine. So it looks
> like an old version can work.
> But now the problem is that when I run our model with this version of
> mpi, it gave me this error message while building the model
> Please see attached below, Was that becasue this version of MPI is too
> old? Now here is the dillema: old version can be installed but does
> not work with the new model. Any advice on this?
>
> Thank you very much.
> Rui
>
> " tidal_diag.o time_manager.o time_utils.o topology.o tp_core.o
> tphysac.o tphysbc.o tphysidl.o trac2d.o tracer_data.o tracers.o
> tracers_suite.o trb_mtn_stress.o tropopause.o trunc.o tsinti.o units.o
> upper_bc.o uv3s_update.o vertical_diffusion.o virtem.o vrtmap.o
> wetdep.o wrap_mpi.o wrap_nf.o wrf_error_fatal.o wrf_message.o
> wv_saturation.o xpavg_mod.o zenith.o zm_conv.o zm_conv_intr.o
> -L/opt/i/netcdf/lib -lnetcdf -static-intel -L/u/home/rum06003/mpi/lib
> -lmpich
> /u/home/rum06003/mpi/lib/libmpich.a(commutil.o)(.text+0x9c2): In
> function `MPIR_Get_contextid':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(commutil.o)(.text+0xa12): In
> function `MPIR_Get_contextid':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(commutil.o)(.text+0xf62): In
> function `MPIR_Get_intercomm_contextid':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(commutil.o)(.text+0xfb2): In
> function `MPIR_Get_intercomm_contextid':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(errutil.o)(.text+0x3b12): In
> function `MPIR_Nest_decr_export':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(errutil.o)(.text+0x3b72): In
> function `MPIR_Nest_decr_export':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(errutil.o)(.text+0x3c22): In
> function `MPIR_Nest_incr_export':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(errutil.o)(.text+0x3c82): In
> function `MPIR_Nest_incr_export':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(errutil.o)(.text+0x40c2): In
> function `MPIR_Err_return_comm':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(errutil.o)(.text+0x4112): In
> function `MPIR_Err_return_comm':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(errutil.o)(.text+0x4312): In
> function `MPIR_Err_return_win':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(errutil.o)(.text+0x4362): In
> function `MPIR_Err_return_win':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(initthread.o)(.text+0x582): In
> function `MPIR_Init_thread':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(initthread.o)(.text+0x5c2): In
> function `MPIR_Init_thread':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(initthread.o)(.text+0x692): In
> function `PMPI_Init_thread':
> : undefined reference to `pthread_key_create'
> /u/home/rum06003/mpi/lib/libmpich.a(initthread.o)(.text+0x7b2): In
> function `PMPI_Init_thread':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(initthread.o)(.text+0x802): In
> function `PMPI_Init_thread':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(initthread.o)(.text+0x932): In
> function `PMPI_Init_thread':
> : undefined reference to `pthread_key_delete'
> /u/home/rum06003/mpi/lib/libmpich.a(initthread.o)(.text+0x9b2): In
> function `PMPI_Init_thread':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(initthread.o)(.text+0xa02): In
> function `PMPI_Init_thread':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(initthread.o)(.text+0xa42): In
> function `PMPI_Init_thread':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(initthread.o)(.text+0xa92): In
> function `PMPI_Init_thread':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(initthread.o)(.text+0xaf2): In
> function `PMPI_Init_thread':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(initthread.o)(.text+0xb42): In
> function `PMPI_Init_thread':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(initthread.o)(.text+0xb82): In
> function `PMPI_Init_thread':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(recv.o)(.text+0x272): In function
> `PMPI_Recv':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(recv.o)(.text+0x302): In function
> `PMPI_Recv':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(recv.o)(.text+0x392): In function
> `PMPI_Recv':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(recv.o)(.text+0x3d2): In function
> `PMPI_Recv':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(send.o)(.text+0x262): In function
> `PMPI_Send':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(send.o)(.text+0x2f2): In function
> `PMPI_Send':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(send.o)(.text+0x382): In function
> `PMPI_Send':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(send.o)(.text+0x3c2): In function
> `PMPI_Send':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(mpidtime.o)(.text+0x4d2): In
> function `MPID_Wtick':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(mpidtime.o)(.text+0x582): In
> function `MPID_Wtick':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(mpidtime.o)(.text+0x612): In
> function `MPID_Wtick':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(mpidtime.o)(.text+0x652): In
> function `MPID_Wtick':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(ch3u_handle_recv_pkt.o)(.text+0x3f92):
> In function `MPIDI_CH3_PktHandler_Accumulate':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(ch3u_handle_recv_pkt.o)(.text+0x3fe2):
> In function `MPIDI_CH3_PktHandler_Accumulate':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(ch3u_handle_recv_req.o)(.text+0x2562):
> In function `MPIDI_CH3_ReqHandler_AccumRespDerivedDTComplete':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(ch3u_handle_recv_req.o)(.text+0x25b2):
> In function `MPIDI_CH3_ReqHandler_AccumRespDerivedDTComplete':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(ch3u_handle_recv_req.o)(.text+0x2da2):
> In function `MPIDI_CH3_ReqHandler_PutAccumRespComplete':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(ch3u_handle_recv_req.o)(.text+0x2df2):
> In function `MPIDI_CH3_ReqHandler_PutAccumRespComplete':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(mpid_type_debug.o)(.text+0x1612):
> In function `MPIDI_Datatype_printf':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(mpid_type_debug.o)(.text+0x1662):
> In function `MPIDI_Datatype_printf':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(allreduce.o)(.text+0x222): In
> function `MPIR_Allreduce_inter':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(allreduce.o)(.text+0x272): In
> function `MPIR_Allreduce_inter':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(allreduce.o)(.text+0x9a2): In
> function `MPIR_Allreduce':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(allreduce.o)(.text+0x9f2): In
> function `MPIR_Allreduce':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(allreduce.o)(.text+0x20e2): In
> function `PMPI_Allreduce':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(allreduce.o)(.text+0x2172): In
> function `PMPI_Allreduce':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(allreduce.o)(.text+0x2202): In
> function `PMPI_Allreduce':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(allreduce.o)(.text+0x2242): In
> function `PMPI_Allreduce':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(barrier.o)(.text+0x792): In
> function `PMPI_Barrier':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(barrier.o)(.text+0x822): In
> function `PMPI_Barrier':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(barrier.o)(.text+0x8b2): In
> function `PMPI_Barrier':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(barrier.o)(.text+0x8f2): In
> function `PMPI_Barrier':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(barrier.o)(.text+0xc12): In
> function `PMPI_Barrier':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(barrier.o)(.text+0xc62): In
> function `PMPI_Barrier':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(op_create.o)(.text+0x182): In
> function `PMPI_Op_create':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(op_create.o)(.text+0x212): In
> function `PMPI_Op_create':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(op_create.o)(.text+0x2a2): In
> function `PMPI_Op_create':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(op_create.o)(.text+0x2e2): In
> function `PMPI_Op_create':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(bcast.o)(.text+0x1b42): In
> function `PMPI_Bcast':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(bcast.o)(.text+0x1bd2): In
> function `PMPI_Bcast':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(bcast.o)(.text+0x1c62): In
> function `PMPI_Bcast':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(bcast.o)(.text+0x1ca2): In
> function `PMPI_Bcast':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(bcast.o)(.text+0x24d2): In
> function `PMPI_Bcast':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(bcast.o)(.text+0x2522): In
> function `PMPI_Bcast':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(alltoall.o)(.text+0x1d42): In
> function `PMPI_Alltoall':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(alltoall.o)(.text+0x1dd2): In
> function `PMPI_Alltoall':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(alltoall.o)(.text+0x1e62): In
> function `PMPI_Alltoall':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(alltoall.o)(.text+0x1ea2): In
> function `PMPI_Alltoall':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(alltoall.o)(.text+0x2982): In
> function `PMPI_Alltoall':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(alltoall.o)(.text+0x29d2): In
> function `PMPI_Alltoall':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(alltoallv.o)(.text+0x1062): In
> function `PMPI_Alltoallv':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(alltoallv.o)(.text+0x10f2): In
> function `PMPI_Alltoallv':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(alltoallv.o)(.text+0x1182): In
> function `PMPI_Alltoallv':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(alltoallv.o)(.text+0x11c2): In
> function `PMPI_Alltoallv':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(alltoallv.o)(.text+0x1fa2): In
> function `PMPI_Alltoallv':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(alltoallv.o)(.text+0x1ff2): In
> function `PMPI_Alltoallv':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(reduce.o)(.text+0xcd2): In
> function `MPIR_Reduce':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(reduce.o)(.text+0xd22): In
> function `MPIR_Reduce':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(reduce.o)(.text+0x23b2): In
> function `MPIR_Reduce_inter':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(reduce.o)(.text+0x2402): In
> function `MPIR_Reduce_inter':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(reduce.o)(.text+0x2b02): In
> function `PMPI_Reduce':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(reduce.o)(.text+0x2b92): In
> function `PMPI_Reduce':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(reduce.o)(.text+0x2c22): In
> function `PMPI_Reduce':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(reduce.o)(.text+0x2c62): In
> function `PMPI_Reduce':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(scatter.o)(.text+0x1a92): In
> function `PMPI_Scatter':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(scatter.o)(.text+0x1b22): In
> function `PMPI_Scatter':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(scatter.o)(.text+0x1bb2): In
> function `PMPI_Scatter':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(scatter.o)(.text+0x1bf2): In
> function `PMPI_Scatter':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(scatter.o)(.text+0x2722): In
> function `PMPI_Scatter':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(scatter.o)(.text+0x2772): In
> function `PMPI_Scatter':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(gather.o)(.text+0x1cf2): In
> function `PMPI_Gather':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(gather.o)(.text+0x1d82): In
> function `PMPI_Gather':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(gather.o)(.text+0x1e12): In
> function `PMPI_Gather':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(gather.o)(.text+0x1e52): In
> function `PMPI_Gather':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(gather.o)(.text+0x2982): In
> function `PMPI_Gather':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(gather.o)(.text+0x29d2): In
> function `PMPI_Gather':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(scatterv.o)(.text+0xa32): In
> function `PMPI_Scatterv':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(scatterv.o)(.text+0xac2): In
> function `PMPI_Scatterv':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(scatterv.o)(.text+0xb52): In
> function `PMPI_Scatterv':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(scatterv.o)(.text+0xb92): In
> function `PMPI_Scatterv':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(scatterv.o)(.text+0x1662): In
> function `PMPI_Scatterv':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(scatterv.o)(.text+0x16b2): In
> function `PMPI_Scatterv':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(gatherv.o)(.text+0xa32): In
> function `PMPI_Gatherv':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(gatherv.o)(.text+0xac2): In
> function `PMPI_Gatherv':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(gatherv.o)(.text+0xb52): In
> function `PMPI_Gatherv':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(gatherv.o)(.text+0xb92): In
> function `PMPI_Gatherv':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(gatherv.o)(.text+0x1662): In
> function `PMPI_Gatherv':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(gatherv.o)(.text+0x16b2): In
> function `PMPI_Gatherv':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(allgather.o)(.text+0x1fb2): In
> function `PMPI_Allgather':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(allgather.o)(.text+0x2042): In
> function `PMPI_Allgather':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(allgather.o)(.text+0x20d2): In
> function `PMPI_Allgather':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(allgather.o)(.text+0x2112): In
> function `PMPI_Allgather':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(allgather.o)(.text+0x2bf2): In
> function `PMPI_Allgather':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(allgather.o)(.text+0x2c42): In
> function `PMPI_Allgather':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(allgatherv.o)(.text+0x2172): In
> function `PMPI_Allgatherv':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(allgatherv.o)(.text+0x2202): In
> function `PMPI_Allgatherv':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(allgatherv.o)(.text+0x2292): In
> function `PMPI_Allgatherv':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(allgatherv.o)(.text+0x22d2): In
> function `PMPI_Allgatherv':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(allgatherv.o)(.text+0x3352): In
> function `PMPI_Allgatherv':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(allgatherv.o)(.text+0x33a2): In
> function `PMPI_Allgatherv':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(helper_fns.o)(.text+0xf42): In
> function `MPIR_Localcopy':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(helper_fns.o)(.text+0xf92): In
> function `MPIR_Localcopy':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(opsum.o)(.text+0x902): In function
> `MPIR_SUM':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(opsum.o)(.text+0x952): In function
> `MPIR_SUM':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(opmax.o)(.text+0x8b2): In function
> `MPIR_MAXF':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(opmax.o)(.text+0x902): In function
> `MPIR_MAXF':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(opmin.o)(.text+0x8b2): In function
> `MPIR_MINF':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(opmin.o)(.text+0x902): In function
> `MPIR_MINF':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(opband.o)(.text+0x832): In
> function `MPIR_BAND':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(opband.o)(.text+0x882): In
> function `MPIR_BAND':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(opbor.o)(.text+0x832): In function
> `MPIR_BOR':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(opbor.o)(.text+0x882): In function
> `MPIR_BOR':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(opbxor.o)(.text+0x832): In
> function `MPIR_BXOR':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(opbxor.o)(.text+0x882): In
> function `MPIR_BXOR':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(opland.o)(.text+0x9c2): In
> function `MPIR_LAND':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(opland.o)(.text+0xa12): In
> function `MPIR_LAND':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(oplor.o)(.text+0xa12): In function
> `MPIR_LOR':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(oplor.o)(.text+0xa62): In function
> `MPIR_LOR':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(oplxor.o)(.text+0xb42): In
> function `MPIR_LXOR':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(oplxor.o)(.text+0xb92): In
> function `MPIR_LXOR':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(opprod.o)(.text+0x9b2): In
> function `MPIR_PROD':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(opprod.o)(.text+0xa02): In
> function `MPIR_PROD':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(opminloc.o)(.text+0x8d2): In
> function `MPIR_MINLOC':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(opminloc.o)(.text+0x922): In
> function `MPIR_MINLOC':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(opmaxloc.o)(.text+0x8d2): In
> function `MPIR_MAXLOC':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(opmaxloc.o)(.text+0x922): In
> function `MPIR_MAXLOC':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(comm_create.o)(.text+0x2e2): In
> function `PMPI_Comm_create':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(comm_create.o)(.text+0x332): In
> function `PMPI_Comm_create':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(comm_create.o)(.text+0x372): In
> function `PMPI_Comm_create':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(comm_create.o)(.text+0x402): In
> function `PMPI_Comm_create':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(comm_create.o)(.text+0xcb2): In
> function `PMPI_Comm_create':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(comm_create.o)(.text+0xdc2): In
> function `PMPI_Comm_create':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(comm_dup.o)(.text+0x232): In
> function `PMPI_Comm_dup':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(comm_dup.o)(.text+0x2c2): In
> function `PMPI_Comm_dup':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(comm_dup.o)(.text+0x352): In
> function `PMPI_Comm_dup':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(comm_dup.o)(.text+0x392): In
> function `PMPI_Comm_dup':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(comm_free.o)(.text+0x202): In
> function `PMPI_Comm_free':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(comm_free.o)(.text+0x292): In
> function `PMPI_Comm_free':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(comm_free.o)(.text+0x322): In
> function `PMPI_Comm_free':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(comm_free.o)(.text+0x362): In
> function `PMPI_Comm_free':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(comm_group.o)(.text+0x222): In
> function `PMPI_Comm_group':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(comm_group.o)(.text+0x2b2): In
> function `PMPI_Comm_group':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(comm_group.o)(.text+0x342): In
> function `PMPI_Comm_group':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(comm_group.o)(.text+0x382): In
> function `PMPI_Comm_group':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(comm_split.o)(.text+0x3e2): In
> function `PMPI_Comm_split':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(comm_split.o)(.text+0x472): In
> function `PMPI_Comm_split':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(comm_split.o)(.text+0xbf2): In
> function `PMPI_Comm_split':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(comm_split.o)(.text+0xc42): In
> function `PMPI_Comm_split':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(comm_split.o)(.text+0xea2): In
> function `PMPI_Comm_split':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(comm_split.o)(.text+0xfc2): In
> function `PMPI_Comm_split':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(type_indexed.o)(.text+0x712): In
> function `PMPI_Type_indexed':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(type_indexed.o)(.text+0x7d2): In
> function `PMPI_Type_indexed':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(type_indexed.o)(.text+0x862): In
> function `PMPI_Type_indexed':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(type_indexed.o)(.text+0xa42): In
> function `PMPI_Type_indexed':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(type_contiguous.o)(.text+0x392):
> In function `PMPI_Type_contiguous':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(type_contiguous.o)(.text+0x422):
> In function `PMPI_Type_contiguous':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(type_contiguous.o)(.text+0x4f2):
> In function `PMPI_Type_contiguous':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(type_contiguous.o)(.text+0x532):
> In function `PMPI_Type_contiguous':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(type_free.o)(.text+0x382): In
> function `PMPI_Type_free':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(type_free.o)(.text+0x412): In
> function `PMPI_Type_free':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(type_free.o)(.text+0x4d2): In
> function `PMPI_Type_free':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(type_free.o)(.text+0x512): In
> function `PMPI_Type_free':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(type_hvector.o)(.text+0x3a2): In
> function `PMPI_Type_hvector':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(type_hvector.o)(.text+0x432): In
> function `PMPI_Type_hvector':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(type_hvector.o)(.text+0x632): In
> function `PMPI_Type_hvector':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(type_hvector.o)(.text+0x672): In
> function `PMPI_Type_hvector':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(type_create_struct.o)(.text+0x5f2):
> In function `PMPI_Type_create_struct':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(type_create_struct.o)(.text+0x682):
> In function `PMPI_Type_create_struct':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(type_create_struct.o)(.text+0x8d2):
> In function `PMPI_Type_create_struct':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(type_create_struct.o)(.text+0xa42):
> In function `PMPI_Type_create_struct':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(type_create_indexed_block.o)(.text+0x4c2):
> In function `PMPI_Type_create_indexed_block':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(type_create_indexed_block.o)(.text+0x582):
> In function `PMPI_Type_create_indexed_block':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(type_create_indexed_block.o)(.text+0xa12):
> In function `PMPI_Type_create_indexed_block':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(type_create_indexed_block.o)(.text+0xaa2):
> In function `PMPI_Type_create_indexed_block':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(group_incl.o)(.text+0x492): In
> function `PMPI_Group_incl':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(group_incl.o)(.text+0x522): In
> function `PMPI_Group_incl':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(group_incl.o)(.text+0x602): In
> function `PMPI_Group_incl':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(group_incl.o)(.text+0x642): In
> function `PMPI_Group_incl':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(group_range_incl.o)(.text+0x4f2):
> In function `PMPI_Group_range_incl':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(group_range_incl.o)(.text+0x582):
> In function `PMPI_Group_range_incl':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(group_range_incl.o)(.text+0x642):
> In function `PMPI_Group_range_incl':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(group_range_incl.o)(.text+0x682):
> In function `PMPI_Group_range_incl':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(group_translate_ranks.o)(.text+0x332):
> In function `PMPI_Group_translate_ranks':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(group_translate_ranks.o)(.text+0x3c2):
> In function `PMPI_Group_translate_ranks':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(group_translate_ranks.o)(.text+0x622):
> In function `PMPI_Group_translate_ranks':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(group_translate_ranks.o)(.text+0x662):
> In function `PMPI_Group_translate_ranks':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(group_union.o)(.text+0x322): In
> function `PMPI_Group_union':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(group_union.o)(.text+0x3b2): In
> function `PMPI_Group_union':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(group_union.o)(.text+0x752): In
> function `PMPI_Group_union':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(group_union.o)(.text+0x792): In
> function `PMPI_Group_union':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(abort.o)(.text+0x232): In function
> `PMPI_Abort':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(abort.o)(.text+0x2c2): In function
> `PMPI_Abort':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(abort.o)(.text+0x352): In function
> `PMPI_Abort':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(abort.o)(.text+0x392): In function
> `PMPI_Abort':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(init.o)(.text+0x52): In function
> `PMPI_Init':
> : undefined reference to `pthread_key_create'
> /u/home/rum06003/mpi/lib/libmpich.a(init.o)(.text+0x192): In function
> `PMPI_Init':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(init.o)(.text+0x1e2): In function
> `PMPI_Init':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(init.o)(.text+0x312): In function
> `PMPI_Init':
> : undefined reference to `pthread_key_delete'
> /u/home/rum06003/mpi/lib/libmpich.a(init.o)(.text+0x392): In function
> `PMPI_Init':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(init.o)(.text+0x3e2): In function
> `PMPI_Init':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(init.o)(.text+0x422): In function
> `PMPI_Init':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(init.o)(.text+0x472): In function
> `PMPI_Init':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(init.o)(.text+0x4d2): In function
> `PMPI_Init':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(init.o)(.text+0x522): In function
> `PMPI_Init':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(init.o)(.text+0x562): In function
> `PMPI_Init':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(finalize.o)(.text+0x472): In
> function `PMPI_Finalize':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(finalize.o)(.text+0x502): In
> function `PMPI_Finalize':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(finalize.o)(.text+0x552): In
> function `PMPI_Finalize':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(finalize.o)(.text+0x562): In
> function `PMPI_Finalize':
> : undefined reference to `pthread_key_delete'
> /u/home/rum06003/mpi/lib/libmpich.a(finalize.o)(.text+0x622): In
> function `PMPI_Finalize':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(finalize.o)(.text+0x792): In
> function `PMPI_Finalize':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(finalize.o)(.text+0x7d2): In
> function `PMPI_Finalize':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(finalize.o)(.text+0x812): In
> function `PMPI_Finalize':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(finalize.o)(.text+0x932): In
> function `PMPI_Finalize':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(finalize.o)(.text+0x9c2): In
> function `PMPI_Finalize':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(irecv.o)(.text+0x272): In function
> `PMPI_Irecv':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(irecv.o)(.text+0x302): In function
> `PMPI_Irecv':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(irecv.o)(.text+0x392): In function
> `PMPI_Irecv':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(irecv.o)(.text+0x3d2): In function
> `PMPI_Irecv':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(irsend.o)(.text+0x272): In
> function `PMPI_Irsend':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(irsend.o)(.text+0x302): In
> function `PMPI_Irsend':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(irsend.o)(.text+0x392): In
> function `PMPI_Irsend':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(irsend.o)(.text+0x3d2): In
> function `PMPI_Irsend':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(isend.o)(.text+0x272): In function
> `PMPI_Isend':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(isend.o)(.text+0x302): In function
> `PMPI_Isend':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(isend.o)(.text+0x392): In function
> `PMPI_Isend':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(isend.o)(.text+0x3d2): In function
> `PMPI_Isend':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(issend.o)(.text+0x272): In
> function `PMPI_Issend':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(issend.o)(.text+0x302): In
> function `PMPI_Issend':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(issend.o)(.text+0x392): In
> function `PMPI_Issend':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(issend.o)(.text+0x3d2): In
> function `PMPI_Issend':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(request_free.o)(.text+0x232): In
> function `PMPI_Request_free':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(request_free.o)(.text+0x2c2): In
> function `PMPI_Request_free':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(request_free.o)(.text+0x352): In
> function `PMPI_Request_free':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(request_free.o)(.text+0x392): In
> function `PMPI_Request_free':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(rsend.o)(.text+0x262): In function
> `PMPI_Rsend':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(rsend.o)(.text+0x2f2): In function
> `PMPI_Rsend':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(rsend.o)(.text+0x382): In function
> `PMPI_Rsend':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(rsend.o)(.text+0x3c2): In function
> `PMPI_Rsend':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(sendrecv.o)(.text+0x2e2): In
> function `PMPI_Sendrecv':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(sendrecv.o)(.text+0x372): In
> function `PMPI_Sendrecv':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(sendrecv.o)(.text+0x402): In
> function `PMPI_Sendrecv':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(sendrecv.o)(.text+0x442): In
> function `PMPI_Sendrecv':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(ssend.o)(.text+0x262): In function
> `PMPI_Ssend':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(ssend.o)(.text+0x2f2): In function
> `PMPI_Ssend':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(ssend.o)(.text+0x382): In function
> `PMPI_Ssend':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(ssend.o)(.text+0x3c2): In function
> `PMPI_Ssend':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(wait.o)(.text+0x532): In function
> `PMPI_Wait':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(wait.o)(.text+0x5c2): In function
> `PMPI_Wait':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(wait.o)(.text+0x6b2): In function
> `PMPI_Wait':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(wait.o)(.text+0x6f2): In function
> `PMPI_Wait':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(waitall.o)(.text+0x6d2): In
> function `PMPI_Waitall':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(waitall.o)(.text+0x762): In
> function `PMPI_Waitall':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(waitall.o)(.text+0x992): In
> function `PMPI_Waitall':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(waitall.o)(.text+0xbb2): In
> function `PMPI_Waitall':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(waitany.o)(.text+0x7a2): In
> function `PMPI_Waitany':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(waitany.o)(.text+0x832): In
> function `PMPI_Waitany':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(waitany.o)(.text+0x992): In
> function `PMPI_Waitany':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(waitany.o)(.text+0x9d2): In
> function `PMPI_Waitany':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(mpir_request.o)(.text+0xc52): In
> function `MPIR_Request_get_error':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(mpir_request.o)(.text+0xc92): In
> function `MPIR_Request_get_error':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(mpir_request.o)(.text+0xf02): In
> function `MPIR_Request_get_error':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(mpir_request.o)(.text+0xf52): In
> function `MPIR_Request_get_error':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(mpir_request.o)(.text+0x17f2): In
> function `MPIR_Request_complete':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(mpir_request.o)(.text+0x1842): In
> function `MPIR_Request_complete':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(mpir_request.o)(.text+0x19b2): In
> function `MPIR_Request_complete':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(mpir_request.o)(.text+0x1a02): In
> function `MPIR_Request_complete':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(info_free.o)(.text+0x212): In
> function `PMPI_Info_free':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(info_free.o)(.text+0x2a2): In
> function `PMPI_Info_free':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(info_free.o)(.text+0x332): In
> function `PMPI_Info_free':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(info_free.o)(.text+0x372): In
> function `PMPI_Info_free':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(ch3u_comm_spawn_multiple.o)(.text+0x622):
> In function `MPIDI_Comm_spawn_multiple':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(ch3u_comm_spawn_multiple.o)(.text+0x672):
> In function `MPIDI_Comm_spawn_multiple':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(mpid_finalize.o)(.text+0x342): In
> function `MPID_Finalize':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(mpid_finalize.o)(.text+0x392): In
> function `MPID_Finalize':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(info_get.o)(.text+0x252): In
> function `PMPI_Info_get':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(info_get.o)(.text+0x2e2): In
> function `PMPI_Info_get':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(info_get.o)(.text+0x372): In
> function `PMPI_Info_get':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(info_get.o)(.text+0x3b2): In
> function `PMPI_Info_get':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(info_getn.o)(.text+0x212): In
> function `PMPI_Info_get_nkeys':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(info_getn.o)(.text+0x2a2): In
> function `PMPI_Info_get_nkeys':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(info_getn.o)(.text+0x332): In
> function `PMPI_Info_get_nkeys':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(info_getn.o)(.text+0x372): In
> function `PMPI_Info_get_nkeys':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(info_getnth.o)(.text+0x252): In
> function `PMPI_Info_get_nthkey':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(info_getnth.o)(.text+0x2e2): In
> function `PMPI_Info_get_nthkey':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(info_getnth.o)(.text+0x372): In
> function `PMPI_Info_get_nthkey':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(info_getnth.o)(.text+0x3b2): In
> function `PMPI_Info_get_nthkey':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(info_getvallen.o)(.text+0x252): In
> function `PMPI_Info_get_valuelen':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(info_getvallen.o)(.text+0x2e2): In
> function `PMPI_Info_get_valuelen':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(info_getvallen.o)(.text+0x372): In
> function `PMPI_Info_get_valuelen':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(info_getvallen.o)(.text+0x3b2): In
> function `PMPI_Info_get_valuelen':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(type_vector.o)(.text+0x3b2): In
> function `PMPI_Type_vector':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(type_vector.o)(.text+0x442): In
> function `PMPI_Type_vector':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(type_vector.o)(.text+0x502): In
> function `PMPI_Type_vector':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(type_vector.o)(.text+0x542): In
> function `PMPI_Type_vector':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(type_struct.o)(.text+0x662): In
> function `PMPI_Type_struct':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(type_struct.o)(.text+0x702): In
> function `PMPI_Type_struct':
> : undefined reference to `pthread_getspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(type_struct.o)(.text+0x8f2): In
> function `PMPI_Type_struct':
> : undefined reference to `pthread_setspecific'
> /u/home/rum06003/mpi/lib/libmpich.a(type_struct.o)(.text+0xa32): In
> function `PMPI_Type_struct':
> : undefined reference to `pthread_setspecific'
> gmake: *** [/data/scratch/rum06003/CTL/bld/cam] Error 1
> "
> ________________________________________
> From: mpich-discuss-bounces at mcs.anl.gov
> [mpich-discuss-bounces at mcs.anl.gov] On Behalf Of Pavan Balaji
> [balaji at mcs.anl.gov]
> Sent: Monday, May 24, 2010 7:15 PM
> To: mpich-discuss at mcs.anl.gov
> Subject: Re: [mpich-discuss] try to install MPICH2 on SGI under local
> account
>
> Thanks for sending the logs. I think you are running into one of the
> timestamp bugs with the MPL package that we recently fixed. Would you
> be
> willing to try out a pre-release version of MPICH2:
> http://www.mcs.anl.gov/research/projects/mpich2/downloads/tarballs/1.3a2/mpich2-1.3a2.tar.gz
>
> Thanks,
>
>   -- Pavan
>
> On 05/24/2010 05:11 PM, Mei, Rui wrote:
> > Now I have deleted all the previous mpi related directories and
> download mpich2-1.2.1p1 and put it under
> /u/home/rum06003/mpich2-1.2.1p1 and execute the following commands:
> >
> >  ./configure --prefix=/u/home/rum06003/mpi  --with-device=ch3:sock
> 2>&1 | tee c.txt (it's ok)
> > make 2>&1 | tee m.txt (there is some error, please see m.txt)
> >
> > Then I followed the guide and did the following command:
> >
> > make clean
> > make V=1 2>&1 | tee m.txt (there is still error, please see m2.txt)
> >
> > for the last command, errors are expected due to the above errors:
> >
> > make install 2>&1 | tee mi.txt (see mi.txt)
> >
> > But for the previous version mpich2-1.1,  the first two steps can
> complete with no error and give errors at the last command in mi.txt
> file as I described before. That's what happened.
> >
> > Thank you very much.
> >
> > Rui
> >
> >
> >
> >
> > ________________________________________
> > From: mpich-discuss-bounces at mcs.anl.gov
> [mpich-discuss-bounces at mcs.anl.gov] On Behalf Of Pavan Balaji
> [balaji at mcs.anl.gov]
> > Sent: Monday, May 24, 2010 3:49 PM
> > To: mpich-discuss at mcs.anl.gov
> > Subject: Re: [mpich-discuss] try to install MPICH2 on SGI under
> local account
> >
> > Your Makefile.in does not match the one in the mpich2-1.2.1p1
> release
> > tarball. Did you clean up your existing directories before
> installing
> > the new version?
> >
> > rm -rf <prefix> mpich2-1.2.1p1
> >
> > ... and start from scratch?
> >
> >   -- Pavan
> >
> > On 05/24/2010 02:43 PM, Mei, Rui wrote:
> >> Here it is. I really appreciate you and Rajeev are still trying to
> work out this for me. I do not know where else to search help.
> >> Thanks,
> >>
> >> Rui
> >> ________________________________________
> >> From: mpich-discuss-bounces at mcs.anl.gov
> [mpich-discuss-bounces at mcs.anl.gov] On Behalf Of Pavan Balaji
> [balaji at mcs.anl.gov]
> >> Sent: Monday, May 24, 2010 3:40 PM
> >> To: mpich-discuss at mcs.anl.gov
> >> Subject: Re: [mpich-discuss] try to install MPICH2 on SGI under
> local account
> >>
> >> This is bizarre. Can you send me your Makefile.in as well?
> >>
> >> Thanks,
> >>
> >>   -- Pavan
> >>
> >> On 05/24/2010 02:17 PM, Mei, Rui wrote:
> >>> I have also tried the latest version. It's similar error message.
> I really have no clue now.
> >>>
> >>> Rui
> >>> ________________________________________
> >>> From: mpich-discuss-bounces at mcs.anl.gov
> [mpich-discuss-bounces at mcs.anl.gov] On Behalf Of Rajeev Thakur
> [thakur at mcs.anl.gov]
> >>> Sent: Monday, May 24, 2010 1:58 PM
> >>> To: mpich-discuss at mcs.anl.gov
> >>> Subject: Re: [mpich-discuss] try to install MPICH2 on SGI under
> local account
> >>>
> >>> You are using MPICH2 1.1, which is an old version. Why don't you
> try the
> >>> latest, 1.2.1p1.
> >>>
> >>> Rajeev
> >>>
> >>>> -----Original Message-----
> >>>> From: mpich-discuss-bounces at mcs.anl.gov
> >>>> [mailto:mpich-discuss-bounces at mcs.anl.gov] On Behalf Of Mei, Rui
> >>>> Sent: Monday, May 24, 2010 8:42 AM
> >>>> To: mpich-discuss at mcs.anl.gov
> >>>> Subject: Re: [mpich-discuss] try to install MPICH2 on SGI
> >>>> under local account
> >>>>
> >>>> Hi, Pavan,
> >>>>
> >>>> Here are attached configure log file, make log file and
> >>>> Makefile. And the files required for running MPI are not
> >>>> installed, e.g.,
> >>>> in the /u/home/rum06003/mpi/bin directory, there are only
> >>>> three files: mpiexec.gforker  mpiexec.hydra  pmi_proxy.
> >>>>
> >>>> Thank you very much.
> >>>> Rui
> >>>> ________________________________________
> >>>> From: mpich-discuss-bounces at mcs.anl.gov
> >>>> [mpich-discuss-bounces at mcs.anl.gov] On Behalf Of Pavan Balaji
> >>>> [balaji at mcs.anl.gov]
> >>>> Sent: Sunday, May 23, 2010 10:22 PM
> >>>> To: mpich-discuss at mcs.anl.gov
> >>>> Subject: Re: [mpich-discuss] try to install MPICH2 on SGI
> >>>> under local account
> >>>>
> >>>> It looks like some of the variables in your makefile are not set.
> Can
> >>>> you send us the top-level config.log and Makefile?
> >>>>
> >>>> Btw, only the documentation didn't get installed. The files
> >>>> required for
> >>>> running MPI applications should already be installed before
> >>>> this error,
> >>>> I think.
> >>>>
> >>>>   -- Pavan
> >>>>
> >>>> On 05/23/2010 07:43 PM, Mei, Rui wrote:
> >>>>> Hi, all,
> >>>>>
> >>>>> Attached is the mi.txt file for your notice. I am
> >>>> desperately hoping to install mpi on this machine for my
> >>>> research model.
> >>>>> I really appreciate your help.
> >>>>>
> >>>>> Rui
> >>>>> ________________________________________
> >>>>> From: Mei, Rui
> >>>>> Sent: Sunday, May 23, 2010 8:36 PM
> >>>>> To: mpich-discuss at mcs.anl.gov
> >>>>> Subject: RE: [mpich-discuss] try to install MPICH2 on SGI
> >>>> under local account
> >>>>> Hi, Pavan,
> >>>>>
> >>>>> Thanks for your help. Now I can pass the configure step but
> >>>> get stuck at the install step while I was executing
> >>>>> 'make install 2>&1 | tee mi.txt'.  Here is the error
> >>>> message. I am looking forward to help from you or someone who
> can
> >>>>> kindly offer some clues.  Is it because I am under my own
> >>>> account instead of root account?
> >>>>> /usr/bin/install -c -m 644 MPI_Win_set_errhandler.html
> >>>> /www3/MPI_Win_set_errhandler.html
> >>>>> /usr/bin/install: cannot create regular file
> >>>> `/www3/MPI_Win_set_errhandler.html': No such file or directory
> >>>>> /usr/bin/install -c -m 644 MPI_Win_set_name.html
> >>>> /www3/MPI_Win_set_name.html
> >>>>> /usr/bin/install: cannot create regular file
> >>>> `/www3/MPI_Win_set_name.html': No such file or directory
> >>>>> /usr/bin/install -c -m 644 MPI_Win_start.html
> >>>> /www3/MPI_Win_start.html
> >>>>> /usr/bin/install: cannot create regular file
> >>>> `/www3/MPI_Win_start.html': No such file or directory
> >>>>> /usr/bin/install -c -m 644 MPI_Win_test.html
> /www3/MPI_Win_test.html
> >>>>> /usr/bin/install: cannot create regular file
> >>>> `/www3/MPI_Win_test.html': No such file or
> >>>> directory/usr/bin/install -c -m 644 MPI_Win_unlock.html
> >>>> /www3/MPI_Win_unlock.html
> >>>>> /usr/bin/install: cannot create regular file
> >>>> `/www3/MPI_Win_unlock.html': No such file or directory
> >>>>> /usr/bin/install -c -m 644 MPI_Win_wait.html
> /www3/MPI_Win_wait.html
> >>>>> /usr/bin/install: cannot create regular file
> >>>> `/www3/MPI_Win_wait.html': No such file or
> >>>> directory/usr/bin/install -c -m 644 MPI_Wtick.html
> >>>> /www3/MPI_Wtick.html
> >>>>> /usr/bin/install: cannot create regular file
> >>>> `/www3/MPI_Wtick.html': No such file or directory
> >>>>> /usr/bin/install -c -m 644 MPI_Wtime.html /www3/MPI_Wtime.html
> >>>>> /usr/bin/install: cannot create regular file
> >>>> `/www3/MPI_Wtime.html': No such file or directory
> >>>>> make: *** [install] Error 1
> >>>>> rum06003 at linuxAltix:~/mpich2-1.1>
> >>>>>
> >>>>>
> >>>>> Thank you very much.
> >>>>>
> >>>>> Rui
> >>>>> ____________________________________
> >>>>> From: mpich-discuss-bounces at mcs.anl.gov
> >>>> [mpich-discuss-bounces at mcs.anl.gov] On Behalf Of Pavan Balaji
> >>>> [balaji at mcs.anl.gov]
> >>>>> Sent: Sunday, May 23, 2010 7:10 PM
> >>>>> To: mpich-discuss at mcs.anl.gov
> >>>>> Subject: Re: [mpich-discuss] try to install MPICH2 on SGI
> >>>> under local account
> >>>>> Rui,
> >>>>>
> >>>>> MPICH2's current default channel (ch3:nemesis) uses CPU atomic
> >>>>> operations for performance issues. Since these are architecture
> >>>>> specific, some architectures are natively supported and for
> >>>> some others
> >>>>> we need to emulate these atomics (which obviously loses
> >>>> performance).
> >>>>> The two options in such cases are:
> >>>>>
> >>>>> 1. Use the emulated atomic operations by specifying the
> >>>>> --with-atomic-primitives=no option to configure.
> >>>>>
> >>>>> 2. Build MPICH2 with a different channel (ch3:sock) which
> >>>> does not use
> >>>>> these atomic operations by specifying the
> >>>> --with-device=ch3:sock option
> >>>>> to configure.
> >>>>>
> >>>>> The second option might perform a little better amongst the two,
> but
> >>>>> both options will have some performance penalty compared to
> >>>>> architectures where atomics are natively supported.
> >>>>>
> >>>>>   -- Pavan
> >>>>>
> >>>>> On 05/23/2010 06:02 PM, Mei, Rui wrote:
> >>>>>> Hi, all,
> >>>>>>
> >>>>>> I am trying to install MPICH2-1.2.1 under my local
> >>>> directory on SGI machine with system information"Linux
> >>>> linuxAltix 2.6.5-7.252-sn2 #1 SMP Tue Feb 14 11:11:04 UTC
> >>>> 2006 ia64 ia64 ia64 GNU/Linux" since I do not have the
> >>>> adminstratior access.
> >>>>>> Here is the last portion of message after I executed "
> >>> ./configure --prefix=/home/you/mpich2-install 2>&1 | tee c.txt"
> >>>>>> checking for OpenPA atomic primitive availability... no
> >>>>>> configure: error:
> >>>>>> The nemesis channel was selected yet no native atomic
> >>>> primitives are
> >>>>>> available on this platform.  OpenPA can emulate atomic
> >>>> primitives using
> >>>>>> locks by specifying --with-atomic-primitives=no but
> >>>> performance will be
> >>>>>> very poor.  This override should only be specified for
> correctness
> >>>>>> testing purposes.
> >>>>>> configure: error: ./configure failed for channels/nemesis
> >>>>>> configure: error: Configure of src/mpid/ch3 failed!
> >>>>>> rum06003 at linuxAltix:~/mpich2-1.2.1> make 2>&1 | tee m.txt
> >>>>>> make: *** No targets specified and no makefile found.  Stop.
> >>>>>>
> >>>>>> I wish someone can help me to solve this problem here.
> >>>> Thank you very much.
> >>>>>> Rui
> >>>>>> _______________________________________________
> >>>>>> mpich-discuss mailing list
> >>>>>> mpich-discuss at mcs.anl.gov
> >>>>>> https://lists.mcs.anl.gov/mailman/listinfo/mpich-discuss
> >>>>> --
> >>>>> Pavan Balaji
> >>>>> http://www.mcs.anl.gov/~balaji
> >>>>> _______________________________________________
> >>>>> mpich-discuss mailing list
> >>>>> mpich-discuss at mcs.anl.gov
> >>>>> https://lists.mcs.anl.gov/mailman/listinfo/mpich-discuss
> >>>>>
> >>>>>
> >>>>>
> >>>> --------------------------------------------------------------
> >>>> ----------
> >>>>> _______________________________________________
> >>>>> mpich-discuss mailing list
> >>>>> mpich-discuss at mcs.anl.gov
> >>>>> https://lists.mcs.anl.gov/mailman/listinfo/mpich-discuss
> >>>> --
> >>>> Pavan Balaji
> >>>> http://www.mcs.anl.gov/~balaji
> >>>> _______________________________________________
> >>>> mpich-discuss mailing list
> >>>> mpich-discuss at mcs.anl.gov
> >>>> https://lists.mcs.anl.gov/mailman/listinfo/mpich-discuss
> >>>>
> >>> _______________________________________________
> >>> mpich-discuss mailing list
> >>> mpich-discuss at mcs.anl.gov
> >>> https://lists.mcs.anl.gov/mailman/listinfo/mpich-discuss
> >>>
> >>>
> >>>
> ------------------------------------------------------------------------
> >>>
> >>> _______________________________________________
> >>> mpich-discuss mailing list
> >>> mpich-discuss at mcs.anl.gov
> >>> https://lists.mcs.anl.gov/mailman/listinfo/mpich-discuss
> >> --
> >> Pavan Balaji
> >> http://www.mcs.anl.gov/~balaji
> >> _______________________________________________
> >> mpich-discuss mailing list
> >> mpich-discuss at mcs.anl.gov
> >> https://lists.mcs.anl.gov/mailman/listinfo/mpich-discuss
> >>
> >>
> >>
> ------------------------------------------------------------------------
> >>
> >> _______________________________________________
> >> mpich-discuss mailing list
> >> mpich-discuss at mcs.anl.gov
> >> https://lists.mcs.anl.gov/mailman/listinfo/mpich-discuss
> >
> > --
> > Pavan Balaji
> > http://www.mcs.anl.gov/~balaji
> > _______________________________________________
> > mpich-discuss mailing list
> > mpich-discuss at mcs.anl.gov
> > https://lists.mcs.anl.gov/mailman/listinfo/mpich-discuss
> >
> >
> >
> ------------------------------------------------------------------------
> >
> > _______________________________________________
> > mpich-discuss mailing list
> > mpich-discuss at mcs.anl.gov
> > https://lists.mcs.anl.gov/mailman/listinfo/mpich-discuss
>
> --
> Pavan Balaji
> http://www.mcs.anl.gov/~balaji
> _______________________________________________
> mpich-discuss mailing list
> mpich-discuss at mcs.anl.gov
> https://lists.mcs.anl.gov/mailman/listinfo/mpich-discuss
> _______________________________________________
> mpich-discuss mailing list
> mpich-discuss at mcs.anl.gov
> https://lists.mcs.anl.gov/mailman/listinfo/mpich-discuss
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