[mpich-discuss] read the same file on all processes
Luiz Carlos da Costa Junior
lcjunior at ufrj.br
Tue Oct 21 23:00:12 CDT 2008
Hi all,
Let me join this conversation. I also "suffer" from these doubts.
In my case, I have an application in two versions, Windows (NTFS) and Linux
(FAT32) and I have first implemented the first approach (make one separated
copy for each machine).
But recently, I started to deal with bigger files (200Mb ~ 1Gb) and this
became very inefficiently. Actually, the reason I suspect is that even we
have multiple processes, the hard disk device that is responsible for manage
all these readings is just one. In other words, this operation is
intrinsically sequential and became a bottleneck (am I right?).
I didn't changed my implementation yet, but I was thinking to move to the
second approach (rank 0 reads and BCast the info) expecting to have better
results.
Does anyone have any experience?
Actually I am not sure if this will be better. I understand that MPI uses
sockets to pass all messages and an natural question is if this operation is
faster than reading from files?
Best regards,
Luiz
On Wed, Oct 22, 2008 at 12:10 AM, Rajeev Thakur <thakur at mcs.anl.gov> wrote:
> How big is the file? What kind of file system is it on?
>
> Rajeev
>
> > -----Original Message-----
> > From: owner-mpich-discuss at mcs.anl.gov
> > [mailto:owner-mpich-discuss at mcs.anl.gov] On Behalf Of
> > Kamaraju Kusumanchi
> > Sent: Tuesday, October 21, 2008 8:27 PM
> > To: mpich-discuss at mcs.anl.gov
> > Subject: [mpich-discuss] read the same file on all processes
> >
> > Hi all,
> >
> > I have a file which needs to be read on all the processes
> > of an MPI job. If I read the same file simultaneously on all
> > the processes, will it cause any problems?
> >
> > I can think of two other options such as
> >
> > - make multiple copies of the same file and read a separate
> > file on different processes
> > - read the file on rank 0 process, then use MPI_Bcast and
> > transfer the contents across the remaining processes.
> >
> > Which approach should be preferred? I am thinking this
> > must be something encountered by others. So, if there is a
> > book/web page which explains these kind of things, a pointer
> > to them would be most appreciated.
> >
> > regards
> > raju
> >
> >
>
>
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