[mpich-discuss] Re: unable to get mpich2 1.0.7 working

Kamaraju Kusumanchi kamaraju at gmail.com
Mon Oct 20 02:08:19 CDT 2008


Just tried out mpich2 1.0.8rc1 and even with that I am getting similar
errors. Looks like the Asynchronous I/O problem has not been nailed
down!

$make testing 2>&1 | tee make_testing_1.0.8rc.log

(cd test && make testing)
make[1]: Entering directory
`/home6/raju/software/compileHere/mpich2-1.0.8rc1/test'
(NOXMLCLOSE=YES && export NOXMLCLOSE && cd mpi && make testing)
make[2]: Entering directory
`/home6/raju/software/compileHere/mpich2-1.0.8rc1/test/mpi'
./runtests -srcdir=/home6/raju/software/unZipped/mpich2-1.0.8rc1/test/mpi
-tests=testlist \

-mpiexec=/home6/raju/software/compiledLibs/mpich2_1.0.8rc1_gcc_4.3.2_gfortran_4.3.2/bin/mpiexec
\
                   -xmlfile=summary.xml
Looking in ./testlist
Processing directory attr
Looking in ./attr/testlist
Processing directory coll
Looking in ./coll/testlist
Processing directory comm
Looking in ./comm/testlist
Processing directory datatype
Looking in ./datatype/testlist
Processing directory errhan
Looking in ./errhan/testlist
Processing directory group
Looking in ./group/testlist
Processing directory info
Looking in ./info/testlist
Processing directory init
Looking in ./init/testlist
Processing directory pt2pt
Looking in ./pt2pt/testlist
Processing directory rma
Looking in ./rma/testlist
Unexpected output in wincall: mpiexec_ank.mae.cornell.edu: cannot
connect to local mpd (/tmp/mpd2.console_raju); possible causes:
Unexpected output in wincall:   1. no mpd is running on this host
Unexpected output in wincall:   2. an mpd is running but was started
without a "console" (-n option)
Unexpected output in wincall: In case 1, you can start an mpd on this host with:
Unexpected output in wincall:     mpd &
Unexpected output in wincall: and you will be able to run jobs just on
this host.
Unexpected output in wincall: For more details on starting mpds on a
set of hosts, see
Unexpected output in wincall: the MPICH2 Installation Guide.
Program wincall exited without No Errors
Unexpected output in baseattrwin: mpiexec_ank.mae.cornell.edu: cannot
connect to local mpd (/tmp/mpd2.console_raju); possible causes:
Unexpected output in baseattrwin:   1. no mpd is running on this host
Unexpected output in baseattrwin:   2. an mpd is running but was
started without a "console" (-n option)
Unexpected output in baseattrwin: In case 1, you can start an mpd on
this host with:
Unexpected output in baseattrwin:     mpd &
Unexpected output in baseattrwin: and you will be able to run jobs
just on this host.
Unexpected output in baseattrwin: For more details on starting mpds on
a set of hosts, see
Unexpected output in baseattrwin: the MPICH2 Installation Guide.
Program baseattrwin exited without No Errors



On Tue, Sep 9, 2008 at 9:25 PM, Kamaraju Kusumanchi <kamaraju at gmail.com> wrote:
> I am trying to compile mpich2 1.0.7 using gfortran 4.3.2, gcc 4.3.2.
>
> First I compiled gcc 4.3.2, gfortran 4.3.2 from its source.
>
> Then, I configured the mpich2 1.0.7's source code with
>
> Configuring MPICH2 version 1.0.7 with '--enable-f77' '--enable-f90'
> '--enable-cxx' '--prefix=/home6/raju/software/compiledLibs/mpich2_1.0.7_gcc_4.3.2_gfortran_4.3.2'
> 'CC=gcc' 'CXX=g++' 'F77=gfortran' 'F90=gfortran'
>
> The config.log is attached in this email.
>
> Then I compiled it using
>
> make 2>&1 | tee make.log
>
> Then I tried to run the tests with
>
> make testing 2>&1 | tee make_testing.log
>
> However the tests fail with the following errors
>
>
>
> Processing directory info
> Looking in ./f77/info/testlist
> Processing directory spawn
> Looking in ./f77/spawn/testlist
> Processing directory io
> Looking in ./f77/io/testlist
> Unexpected output in iwriteatf: mpiexec_ank.mae.cornell.edu
> (handle_sig_occurred 1122): job ending due to env var
> MPIEXEC_TIMEOUT=180
> Program iwriteatf exited without No Errors
> Unexpected output in iwritef: mpiexec_ank.mae.cornell.edu
> (handle_sig_occurred 1122): job ending due to env var
> MPIEXEC_TIMEOUT=180
> Program iwritef exited without No Errors
> Unexpected output in iwriteshf: mpiexec_ank.mae.cornell.edu
> (handle_sig_occurred 1122): job ending due to env var
> MPIEXEC_TIMEOUT=180
> Program iwriteshf exited without No Errors
> Unexpected output in writef: mpiexec_ank.mae.cornell.edu
> (handle_sig_occurred 1122): job ending due to env var
> MPIEXEC_TIMEOUT=180
> Program writef exited without No Errors
> Unexpected output in writeatf: mpiexec_ank.mae.cornell.edu
> (handle_sig_occurred 1122): job ending due to env var
> MPIEXEC_TIMEOUT=180
> Program writeatf exited without No Errors
> Unexpected output in writeallf: mpiexec_ank.mae.cornell.edu
> (handle_sig_occurred 1122): job ending due to env var
> MPIEXEC_TIMEOUT=180
> Program writeallf exited without No Errors
> Unexpected output in writeshf: mpiexec_ank.mae.cornell.edu
> (handle_sig_occurred 1122): job ending due to env var
> MPIEXEC_TIMEOUT=180
> Program writeshf exited without No Errors
> Unexpected output in writeordf: mpiexec_ank.mae.cornell.edu
> (handle_sig_occurred 1122): job ending due to env var
> MPIEXEC_TIMEOUT=180
> Program writeordf exited without No Errors
> Unexpected output in writeatallf: mpiexec_ank.mae.cornell.edu
> (handle_sig_occurred 1122): job ending due to env var
> MPIEXEC_TIMEOUT=180
> Program writeatallf exited without No Errors
> Unexpected output in writeatallbef: mpiexec_ank.mae.cornell.edu
> (handle_sig_occurred 1122): job ending due to env var
> MPIEXEC_TIMEOUT=180
> Program writeatallbef exited without No Errors
> Unexpected output in writeallbef: mpiexec_ank.mae.cornell.edu
> (handle_sig_occurred 1122): job ending due to env var
> MPIEXEC_TIMEOUT=180
> Program writeallbef exited without No Errors
> Unexpected output in writeordbef: mpiexec_ank.mae.cornell.edu
> (handle_sig_occurred 1122): job ending due to env var
> MPIEXEC_TIMEOUT=180
> Program writeordbef exited without No Errors
>
>
> Can someone please tell me what I am doing wrong?
> I am attaching the configure.log, config.log, make.log,
> make_testing.log for your reference.
>
> $gcc -v
> Using built-in specs.
> Target: x86_64-unknown-linux-gnu
> Configured with: /home6/raju/software/unZipped/gcc-4.3.2/configure
> --prefix=/home6/raju/software/compiledSoftware/gcc_4.3.2_20080827
> Thread model: posix
> gcc version 4.3.2 (GCC)
>
> $gfortran -v
> Using built-in specs.
> Target: x86_64-unknown-linux-gnu
> Configured with: /home6/raju/software/unZipped/gcc-4.3.2/configure
> --prefix=/home6/raju/software/compiledSoftware/gcc_4.3.2_20080827
> Thread model: posix
> gcc version 4.3.2 (GCC)
>
> $uname -a
> Linux node1.ank.mae.cornell.edu 2.6.18-53.1.14.el5 #1 SMP Wed Mar 5
> 11:37:38 EST 2008 x86_64 x86_64 x86_64 GNU/Linux
>
> $cat /etc/redhat-release
> CentOS release 5.2 (Final)
>
>
> thanks
> raju
>
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