[MPICH] Problems with mpicc

Jeffrey B. Layton laytonjb at charter.net
Thu Jul 19 16:52:02 CDT 2007


That did it!

Thanks!

Jeff

>
> Jeff,
>
> Do you have the MPICH_CC environment set to 
> /home/laytonj/bin/mpich2-1.0.5p4-g95/bin/mpicc?
>
> If so, do an unset MPICH_CC (unsetenv MPICH_CC in csh) and try again.
>
> MPICH_CC is used to override the default compiler (usually gcc, or 
> icc) in the mpicc script.  Normally this should not be set.
>
> Darius
>
> On 07/19/2007 04:39 PM, Jeffrey B. Layton wrote:
>> Darius,
>>
>> Here's the compile line with -show
>>
>> mpicc mpi_serial_io.c -o mpi_serial_io -show
>> /home/laytonj/bin/mpich2-1.0.5p4-g95/bin/mpicc mpi_serial_io.c -o 
>> mpi_serial_io -I/home/laytonj/bin/mpich2-1.0.5p4-g95/include 
>> -L/home/laytonj/bin/mpich2-1.0.5p4-g95/lib -lmpich -lpthread -lrt
>>
>> Thanks!
>>
>> Jeff
>>
>>> Hi Jeff,
>>>
>>> Add
>>>   -show
>>> to the end of your mpicc command and send us the output.  This will 
>>> show the actual compile command.
>>>
>>> Thanks,
>>> Darius
>>>
>>> On 07/19/2007 04:12 PM, Jeffrey B. Layton wrote:
>>>> I can't even seem to compile to create test. I just tried a
>>>> different binary output name with the same result
>>>> (it hung for about 5 minutes).
>>>>
>>>> Jeff
>>>>
>>>>> Just in case this might be the problem, I'll remind you that there 
>>>>> is a system program named "test" which does nothing but set the 
>>>>> exit code.
>>>>> Are you sure you aren't accidentally running this program instead 
>>>>> of the one compiled from code.c but linked as "test"?
>>>>>
>>>>> Rusty
>>>>>
>>>>> On Jul 19, 2007, at 3:47 PM, Jeffrey B. Layton wrote:
>>>>>
>>>>>> Afternoon,
>>>>>>
>>>>>> I built mpich2-1.0.5p4 with g95 and gcc 3.4.3 (see below).
>>>>>> Here's the configuration I used:
>>>>>>
>>>>>> ./configure  -prefix=/home/laytonj/bin/mpich2-1.0.5p4-g95  \
>>>>>> --enable-f77 --enable-f90 --enable-romio --disable-mpe \
>>>>>> --with-file-system="nfs+ufs"
>>>>>>
>>>>>> MPICH2 seemed to build and install just fine. Then I tried
>>>>>> compiling one of the non-MPI-IO codes from the MPI-2
>>>>>> book (see below). When I compile:
>>>>>>
>>>>>> mpicc code.c -o test
>>>>>>
>>>>>> it just hangs for a long time (I've let it sit for over 20 mins.).
>>>>>> The load stays around 1.0 and the memory usage doesn't
>>>>>> increase during the whole time.
>>>>>>
>>>>>> I know this one is a toughy. Any ideas?
>>>>>>
>>>>>> Thanks!
>>>>>>
>>>>>> Jeff
>>>>>>
>>>>>> gcc configuration:
>>>>>> % gcc -v
>>>>>> Reading specs from /usr/lib/gcc/i386-redhat-linux/3.4.3/specs
>>>>>> Configured with: ../configure --prefix=/usr 
>>>>>> --mandir=/usr/share/man --infodir=/usr/share/info --enable-shared 
>>>>>> --enable-threads=posix --disable-checking --with-system-zlib 
>>>>>> --enable-__cxa_atexit --disable-libunwind-exceptions 
>>>>>> --enable-java-awt=gtk --host=i386-redhat-linux
>>>>>> Thread model: posix
>>>>>> gcc version 3.4.3 20050227 (Red Hat 3.4.3-22.1)
>>>>>>
>>>>>> sample code:
>>>>>> /* example of sequential Unix write into a common file */
>>>>>> #include "mpi.h"
>>>>>> #include <stdio.h>
>>>>>> #define BUFSIZE 100
>>>>>>
>>>>>> int main(int argc, char *argv[])
>>>>>> {
>>>>>>    int i, myrank, numprocs, buf[BUFSIZE];
>>>>>>    MPI_Status status;
>>>>>>    FILE *myfile;
>>>>>>
>>>>>>    MPI_Init(&argc, &argv);
>>>>>>    MPI_Comm_rank(MPI_COMM_WORLD, &myrank);
>>>>>>    MPI_Comm_size(MPI_COMM_WORLD, &numprocs);
>>>>>>    for (i=0; i<BUFSIZE; i++)
>>>>>>        buf[i] = myrank * BUFSIZE + i;
>>>>>>    if (myrank != 0)
>>>>>>        MPI_Send(buf, BUFSIZE, MPI_INT, 0, 99, MPI_COMM_WORLD);
>>>>>>    else {
>>>>>>        myfile = fopen("testfile", "w");
>>>>>>        fwrite(buf, sizeof(int), BUFSIZE, myfile);
>>>>>>        for (i=1; i<numprocs; i++) {
>>>>>>            MPI_Recv(buf, BUFSIZE, MPI_INT, i, 99, MPI_COMM_WORLD,
>>>>>>                     &status);
>>>>>>            fwrite(buf, sizeof(int), BUFSIZE, myfile);
>>>>>>        }
>>>>>>        fclose(myfile);
>>>>>>    }
>>>>>>    MPI_Finalize();
>>>>>>    return 0;
>>>>>> }
>>>>>>
>>>>>>
>>>>>>
>>>>>
>>>>>
>>>>
>>>
>>
>




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