[MOAB-dev] moab compilation errors with recent nek version
Vegendla, Surya Narayana Prasad
svegendla at anl.gov
Thu Jul 10 21:23:26 CDT 2014
Thanks Vijay.
Prasad
On 7/10/14, 8:15 PM, "Vijay S. Mahadevan" <vijay.m at gmail.comV> wrote:
>Prasad, I pushed a fix to nek to rectify the compilation errors.
>Verified on blues and on a mac system. Update your sources and let me
>know if there are any more issues.
>
>Vijay
>
>On Thu, Jul 10, 2014 at 11:21 AM, Vijay S. Mahadevan <vijay.m at gmail.com>
>wrote:
>> Ah true, forgot about the implicit none.
>>
>> Prasad, I'll fix this and push it to nek repo by afternoon. I was able
>> to replicate it locally with updated sources.
>>
>> Vijay
>>
>> On Thu, Jul 10, 2014 at 11:07 AM, Tim Tautges
>> <timothy.tautges at cd-adapco.com> wrote:
>>> Vijay,
>>> This is due to MOAB's include file in nek having an 'implicit none'
>>> statement, then including a Nek include file which uses an implicitly
>>>typed
>>> variable (common/IOFLAG/nio). I think in that same moab include file
>>>in
>>> nek, there are type statements for all the implicitly-typed nek
>>>variables,
>>> and nio needs to be added to that.
>>>
>>> Or, Nek could forego all that extra debugging it has to do by stopping
>>>its
>>> use of implicit typing (sorry, but it's true).
>>>
>>> - tim
>>>
>>>
>>> On 07/10/2014 10:54 AM, Vijay S. Mahadevan wrote:
>>>>
>>>> Prasad, I don't see any MOAB related compilation errors here. Are you
>>>> sure the problem setup (SIZE) is correct ? I haven't seen any problems
>>>> with NEK+MOAB on blues before.
>>>>
>>>> If you can send the entire make.log, we can help you find the actual
>>>> cause. For problem setup related queries, please contact the NEK list.
>>>>
>>>> Vijay
>>>>
>>>> On Thu, Jul 10, 2014 at 10:38 AM, Vegendla, Surya Narayana Prasad
>>>> <svegendla at anl.gov> wrote:
>>>>>
>>>>> Hi all,
>>>>>
>>>>>
>>>>>
>>>>> I seen the following error messages while compiling moab_conjht on
>>>>> blues/mira with recent nek version.
>>>>>
>>>>> Here I am posting error messages, let me know how to avoid these
>>>>> compilation
>>>>> problems.
>>>>>
>>>>>
>>>>>
>>>>> Thanks,
>>>>>
>>>>> Prasad
>>>>>
>>>>>
>>>>>
>>>>> mpif77 -f77=ifort -c -O2 -r8 -fpconstant -fpp -DMOAB -DPTRSIZE8
>>>>>-DMPI
>>>>> -DLONGINT8 -DUNDERSCORE -DGLOBAL_LONG_LONG
>>>>> -I/home/svegendla/nekFiles/moab_conjht
>>>>> -I/home/svegendla/nek5_svn/trunk/nek
>>>>> -I./ -DUNORDERED_MAP_NS=std::tr1
>>>>>-DHAVE_UNORDERED_MAP=tr1/unordered_map
>>>>> -DHAVE_UNORDERED_SET=tr1/unordered_set
>>>>> -I/soft/netcdf/4.0.1-intel-11-serial/include
>>>>> -I/home/jain/lib/hdf5-1.8.7//include -isystem
>>>>> /home/jain/lib/hdf5-1.8.7//include -DTEMPLATE_SPECIALIZATION
>>>>> -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF
>>>>>-D_FILE_OFFSET_BITS=64
>>>>> -DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL -DNETCDF_FILE -DCGM
>>>>> -I/home/jain/install/opt_moab//include
>>>>> /home/svegendla/nek5_svn/trunk/nek/3rd_party/moab.f -o obj/moab.o
>>>>> mpicc -cc=icc -c -O2 -DMOAB -DPTRSIZE8 -DMPI -DLONGINT8 -DUNDERSCORE
>>>>> -DGLOBAL_LONG_LONG -DPREFIX=jl_
>>>>> /home/svegendla/nek5_svn/trunk/nek/jl/comm.c -o obj/jl_comm.o
>>>>> mpicc -cc=icc -c -O2 -DMOAB -DPTRSIZE8 -DMPI -DLONGINT8 -DUNDERSCORE
>>>>> -DGLOBAL_LONG_LONG -DPREFIX=jl_
>>>>> /home/svegendla/nek5_svn/trunk/nek/jl/tensor.c -o obj/jl_tensor.o
>>>>> mpicc -cc=icc -c -O2 -DMOAB -DPTRSIZE8 -DMPI -DLONGINT8 -DUNDERSCORE
>>>>> -DGLOBAL_LONG_LONG -DPREFIX=jl_
>>>>> /home/svegendla/nek5_svn/trunk/nek/jl/fail.c -o obj/jl_fail.o
>>>>> /home/svegendla/nek5_svn/trunk/nek/jl/fail.c(18): warning #1628:
>>>>>function
>>>>> declared with "noreturn" does return
>>>>> }
>>>>> ^
>>>>>
>>>>> mpicc -cc=icc -c -O2 -DMOAB -DPTRSIZE8 -DMPI -DLONGINT8 -DUNDERSCORE
>>>>> -DGLOBAL_LONG_LONG -DPREFIX=jl_
>>>>> /home/svegendla/nek5_svn/trunk/nek/jl/fcrystal.c -o obj/jl_fcrystal.o
>>>>> mpicc -cc=icc -c -O2 -DMOAB -DPTRSIZE8 -DMPI -DLONGINT8 -DUNDERSCORE
>>>>> -DGLOBAL_LONG_LONG -DPREFIX=jl_
>>>>> /home/svegendla/nek5_svn/trunk/nek/jl/findpts.c -o obj/jl_findpts.o
>>>>> ./SIZE(126): error #6404: This name does not have a type, and must
>>>>>have
>>>>> an
>>>>> explicit type. [NIO]
>>>>> common/IOFLAG/nio ! for logfile verbosity control
>>>>> --------------------^
>>>>> ./SIZE(126): error #6404: This name does not have a type, and must
>>>>>have
>>>>> an
>>>>> explicit type. [NIO]
>>>>> common/IOFLAG/nio ! for logfile verbosity control
>>>>> --------------------^
>>>>> ./SIZE(126): error #6404: This name does not have a type, and must
>>>>>have
>>>>> an
>>>>> explicit type. [NIO]
>>>>> common/IOFLAG/nio ! for logfile verbosity control
>>>>> --------------------^
>>>>> ./SIZE(126): error #6404: This name does not have a type, and must
>>>>>have
>>>>> an
>>>>> explicit type. [NIO]
>>>>> common/IOFLAG/nio ! for logfile verbosity control
>>>>> --------------------^
>>>>> ./SIZE(126): error #6404: This name does not have a type, and must
>>>>>have
>>>>> an
>>>>> explicit type. [NIO]
>>>>> common/IOFLAG/nio ! for logfile verbosity control
>>>>> --------------------^
>>>>> ./SIZE(126): error #6404: This name does not have a type, and must
>>>>>have
>>>>> an
>>>>> explicit type. [NIO]
>>>>> common/IOFLAG/nio ! for logfile verbosity control
>>>>> --------------------^
>>>>> ./SIZE(126): error #6404: This name does not have a type, and must
>>>>>have
>>>>> an
>>>>> explicit type. [NIO]
>>>>> common/IOFLAG/nio ! for logfile verbosity control
>>>>> --------------------^
>>>>> ./SIZE(126): error #6404: This name does not have a type, and must
>>>>>have
>>>>> an
>>>>> explicit type. [NIO]
>>>>> common/IOFLAG/nio ! for logfile verbosity control
>>>>> --------------------^
>>>>> ./SIZE(126): error #6404: This name does not have a type, and must
>>>>>have
>>>>> an
>>>>> explicit type. [NIO]
>>>>> common/IOFLAG/nio ! for logfile verbosity control
>>>>> --------------------^
>>>>> ./SIZE(126): error #6404: This name does not have a type, and must
>>>>>have
>>>>> an
>>>>> explicit type. [NIO]
>>>>> common/IOFLAG/nio ! for logfile verbosity control
>>>>> --------------------^
>>>>> ./SIZE(126): error #6404: This name does not have a type, and must
>>>>>have
>>>>> an
>>>>> explicit type. [NIO]
>>>>> common/IOFLAG/nio ! for logfile verbosity control
>>>>> --------------------^
>>>>> ./SIZE(126): error #6404: This name does not have a type, and must
>>>>>have
>>>>> an
>>>>> explicit type. [NIO]
>>>>> common/IOFLAG/nio ! for logfile verbosity control
>>>>> --------------------^
>>>>> ./SIZE(126): error #6404: This name does not have a type, and must
>>>>>have
>>>>> an
>>>>> explicit type. [NIO]
>>>>> common/IOFLAG/nio ! for logfile verbosity control
>>>>> --------------------^
>>>>> ./SIZE(126): error #6404: This name does not have a type, and must
>>>>>have
>>>>> an
>>>>> explicit type. [NIO]
>>>>> common/IOFLAG/nio ! for logfile verbosity control
>>>>> --------------------^
>>>>> ./SIZE(126): error #6404: This name does not have a type, and must
>>>>>have
>>>>> an
>>>>> explicit type. [NIO]
>>>>> common/IOFLAG/nio ! for logfile verbosity control
>>>>> --------------------^
>>>>> ./SIZE(126): error #6404: This name does not have a type, and must
>>>>>have
>>>>> an
>>>>> explicit type. [NIO]
>>>>> common/IOFLAG/nio ! for logfile verbosity control
>>>>> --------------------^
>>>>> ./SIZE(126): error #6404: This name does not have a type, and must
>>>>>have
>>>>> an
>>>>> explicit type. [NIO]
>>>>> common/IOFLAG/nio ! for logfile verbosity control
>>>>> --------------------^
>>>>> ./SIZE(126): error #6404: This name does not have a type, and must
>>>>>have
>>>>> an
>>>>> explicit type. [NIO]
>>>>> common/IOFLAG/nio ! for logfile verbosity control
>>>>> --------------------^
>>>>> mpicc -cc=icc -c -O2 -DMOAB -DPTRSIZE8 -DMPI -DLONGINT8 -DUNDERSCORE
>>>>> -DGLOBAL_LONG_LONG -DPREFIX=jl_
>>>>> /home/svegendla/nek5_svn/trunk/nek/jl/findpts_local.c -o
>>>>> obj/jl_findpts_local.o
>>>>> ./SIZE(126): error #6404: This name does not have a type, and must
>>>>>have
>>>>> an
>>>>> explicit type. [NIO]
>>>>> common/IOFLAG/nio ! for logfile verbosity control
>>>>> --------------------^
>>>>> ./SIZE(126): error #6404: This name does not have a type, and must
>>>>>have
>>>>> an
>>>>> explicit type. [NIO]
>>>>> common/IOFLAG/nio ! for logfile verbosity control
>>>>> --------------------^
>>>>> ./SIZE(126): error #6404: This name does not have a type, and must
>>>>>have
>>>>> an
>>>>> explicit type. [NIO]
>>>>> common/IOFLAG/nio ! for logfile verbosity control
>>>>> --------------------^
>>>>> ./SIZE(126): error #6404: This name does not have a type, and must
>>>>>have
>>>>> an
>>>>> explicit type. [NIO]
>>>>> common/IOFLAG/nio ! for logfile verbosity control
>>>>> --------------------^
>>>>> ./SIZE(126): error #6404: This name does not have a type, and must
>>>>>have
>>>>> an
>>>>> explicit type. [NIO]
>>>>> common/IOFLAG/nio ! for logfile verbosity control
>>>>> --------------------^
>>>>> ./SIZE(126): error #6404: This name does not have a type, and must
>>>>>have
>>>>> an
>>>>> explicit type. [NIO]
>>>>> common/IOFLAG/nio ! for logfile verbosity control
>>>>> --------------------^
>>>>> mpicc -cc=icc -c -O2 -DMOAB -DPTRSIZE8 -DMPI -DLONGINT8 -DUNDERSCORE
>>>>> -DGLOBAL_LONG_LONG -DPREFIX=jl_
>>>>> /home/svegendla/nek5_svn/trunk/nek/jl/obbox.c -o obj/jl_obbox.o
>>>>> ./SIZE(126): error #6404: This name does not have a type, and must
>>>>>have
>>>>> an
>>>>> explicit type. [NIO]
>>>>> common/IOFLAG/nio ! for logfile verbosity control
>>>>> --------------------^
>>>>> ./SIZE(126): error #6404: This name does not have a type, and must
>>>>>have
>>>>> an
>>>>> explicit type. [NIO]
>>>>> common/IOFLAG/nio ! for logfile verbosity control
>>>>> --------------------^
>>>>> ./SIZE(126): error #6404: This name does not have a type, and must
>>>>>have
>>>>> an
>>>>> explicit type. [NIO]
>>>>> common/IOFLAG/nio ! for logfile verbosity control
>>>>> --------------------^
>>>>> ./SIZE(126): error #6404: This name does not have a type, and must
>>>>>have
>>>>> an
>>>>> explicit type. [NIO]
>>>>> common/IOFLAG/nio ! for logfile verbosity control
>>>>> --------------------^
>>>>> ./SIZE(126): error #6404: This name does not have a type, and must
>>>>>have
>>>>> an
>>>>> explicit type. [NIO]
>>>>> common/IOFLAG/nio ! for logfile verbosity control
>>>>> --------------------^
>>>>> ./SIZE(126): error #6404: This name does not have a type, and must
>>>>>have
>>>>> an
>>>>> explicit type. [NIO]
>>>>> common/IOFLAG/nio ! for logfile verbosity control
>>>>> --------------------^
>>>>> /tmp/ifortnacSYu.i(21993): catastrophic error: Too many errors,
>>>>>exiting
>>>>> compilation aborted for
>>>>> /home/svegendla/nek5_svn/trunk/nek/3rd_party/moab.f
>>>>> (code 1)
>>>>> make: *** [obj/moab.o] Error 1
>>>>> make: *** Waiting for unfinished jobs....
>>>>>
>>>>>
>>>>>
>>>>>
>>>>>
>>>>>
>>>
>>> --
>>> Timothy J. Tautges
>>> Manager, Directed Meshing, CD-adapco
>>> Phone: 608-354-1459
>>> timothy.tautges at cd-adapco.com
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