[MOAB-dev] write_file freezes on Cetus

Vijay S. Mahadevan vijay.m at gmail.com
Fri Apr 4 13:56:50 CDT 2014


> I run [akanaev at cetuslac1 ~]$ qsub -n 4 -t 01:00:00 -A ThermHydraX
> ReduceExchangeTags karmanp4.h5m USERTAG 100
>
> It makes 7600 Bytes file test.h5m and freezes like this forever

Can you verify if it works on other combinations of processors (2, 8
etc) ? If the example still fails, please send over the input mesh
file so that we can find out the actual issue.

Vijay

On Fri, Apr 4, 2014 at 1:34 PM,  <kanaev at ibrae.ac.ru> wrote:
> Hello MOAB-dev,
>
>
>
> I've tried to run one of your examples ReduceExchangeTags.cpp on Cetus
>
> Makefile i used:
>
>
>
> ZLIB_DIR=/soft/libraries/alcf/current/xl/ZLIB
>
> HDF5_DIR=/soft/libraries/hdf5/current/cnk-xl/current
>
> MOAB_DIR=/soft/applications/moab/4.6.0/cnk-xl/current
>
>
>
> LDADD = -lMOAB -liMesh -lhdf5
>
> LIBS =-lz
>
>
>
> CXX = mpixlcxx
>
> CXXFLAGS = -O0
>
>
>
> LDFLAGS =  -L$(ZLIB_DIR)/lib  -L$(HDF5_DIR)/lib -L$(MOAB_DIR)/lib
>
>
>
> INCLUDES=-I$(MOAB_DIR)/include
>
>
>
> CXXCOMPILE = $(CXX) $(CXXFLAGS) $(INCLUDES)
>
>
>
> ReduceExchangeTags: ReduceExchangeTags.o
>
> @rm -f ReduceExchangeTags
>
> $(CXXCOMPILE) ReduceExchangeTags.o -o ReduceExchangeTags $(LDFLAGS) $(LDADD)
> $(LIBS)
>
>
>
> ReduceExchangeTags.o: ReduceExchangeTags.cpp
>
> $(CXXCOMPILE) -c ReduceExchangeTags.cpp
>
> clean:
>
> rm -rf *o ReduceExchangeTags
>
>
>
> I run [akanaev at cetuslac1 ~]$ qsub -n 4 -t 01:00:00 -A ThermHydraX
> ReduceExchangeTags karmanp4.h5m USERTAG 100
>
> It makes 7600 Bytes file test.h5m and freezes like this forever
>
> Please check what's wrong
>
>
>
> Anton


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