[MOAB-dev] buildbot failure in Fathom on moab-32bit-handles

moab-dev at mcs.anl.gov moab-dev at mcs.anl.gov
Wed Dec 22 00:04:14 CST 2010 

The Fathomatic has detected a failed build of moab-32bit-handles on Fathom.
Full details are available at:
 http://gnep.mcs.anl.gov:8010/builders/moab-32bit-handles/builds/321

Buildbot URL: http://gnep.mcs.anl.gov:8010/

Buildslave for this Build: gnep

Build Reason: The Nightly scheduler named 'nightly' triggered this build
Build Source Stamp: None
Blamelist: 

BUILD FAILED: failed compile

LOG EXCERPT:
(cd .libs/libmoabio.lax/libmhdf.a && ar x /disk/itaps-buildslave/moab-32bit-handles/build/src/io/mhdf/.libs/libmhdf.a)
ar cru .libs/libmoabio.a  IODebugTrack.o ExoIIUtil.o FileTokenizer.o GmshUtil.o ReadABAQUS.o ReadGmsh.o ReadIDEAS.o ReadMCNP5.o ReadNASTRAN.o ReadSmf.o ReadSms.o ReadSTL.o ReadTetGen.o ReadVtk.o SMF_State.o Tqdcfr.o VtkUtil.o WriteAns.o WriteGMV.o WriteGmsh.o WriteSTL.o WriteSmf.o WriteTemplate.o WriteVtk.o ReadNCDF.o WriteNCDF.o WriteSLAC.o ReadNC.o ReadHDF5.o ReadHDF5Dataset.o ReadHDF5VarLen.o WriteHDF5.o  .libs/libmoabio.lax/libmhdf.a/nodes.o .libs/libmoabio.lax/libmhdf.a/adjacency.o .libs/libmoabio.lax/libmhdf.a/util.o .libs/libmoabio.lax/libmhdf.a/file.o .libs/libmoabio.lax/libmhdf.a/file-handle.o .libs/libmoabio.lax/libmhdf.a/connectivity.o .libs/libmoabio.lax/libmhdf.a/tags.o .libs/libmoabio.lax/libmhdf.a/status.o .libs/libmoabio.lax/libmhdf.a/file-desc.o .libs/libmoabio.lax/libmhdf.a/sets.o 
ranlib .libs/libmoabio.a
rm -fr .libs/libmoabio.lax
creating libmoabio.la
(cd .libs && rm -f libmoabio.la && ln -s ../libmoabio.la libmoabio.la)
 ...
Making all in .
make[5]: Entering directory `/disk/itaps-buildslave/moab-32bit-handles/build/src'
/bin/sh ../libtool --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel  -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64   -DHDF5_FILE -DNETCDF_FILE  -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map  -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -MT AdaptiveKDTree.lo -MD -MP -MF .deps/AdaptiveKDTree.Tpo -c -o AdaptiveKDTree.lo AdaptiveKDTree.cpp
 g++ -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -MT AdaptiveKDTree.lo -MD -MP -MF .deps/AdaptiveKDTree.Tpo -c AdaptiveKDTree.cpp -o AdaptiveKDTree.o
mv -f .deps/AdaptiveKDTree.Tpo .deps/AdaptiveKDTree.Plo
/bin/sh ../libtool --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel  -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64   -DHDF5_FILE -DNETCDF_FILE  -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map  -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -MT AEntityFactory.lo -MD -MP -MF .deps/AEntityFactory.Tpo -c -o AEntityFactory.lo AEntityFactory.cpp
 g++ -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -MT AEntityFactory.lo -MD -MP -MF .deps/AEntityFactory.Tpo -c AEntityFactory.cpp -o AEntityFactory.o
mv -f .deps/AEntityFactory.Tpo .deps/AEntityFactory.Plo
/bin/sh ../libtool --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel  -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64   -DHDF5_FILE -DNETCDF_FILE  -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map  -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -MT AffineXform.lo -MD -MP -MF .deps/AffineXform.Tpo -c -o AffineXform.lo AffineXform.cpp
 g++ -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -MT AffineXform.lo -MD -MP -MF .deps/AffineXform.Tpo -c AffineXform.cpp -o AffineXform.o
mv -f .deps/AffineXform.Tpo .deps/AffineXform.Plo
/bin/sh ../libtool --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel  -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64   -DHDF5_FILE -DNETCDF_FILE  -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map  -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -MT AxisBox.lo -MD -MP -MF .deps/AxisBox.Tpo -c -o AxisBox.lo AxisBox.cpp
 g++ -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -MT AxisBox.lo -MD -MP -MF .deps/AxisBox.Tpo -c AxisBox.cpp -o AxisBox.o
mv -f .deps/AxisBox.Tpo .deps/AxisBox.Plo
/bin/sh ../libtool --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel  -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64   -DHDF5_FILE -DNETCDF_FILE  -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map  -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -MT BitPage.lo -MD -MP -MF .deps/BitPage.Tpo -c -o BitPage.lo BitPage.cpp
 g++ -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -MT BitPage.lo -MD -MP -MF .deps/BitPage.Tpo -c BitPage.cpp -o BitPage.o
mv -f .deps/BitPage.Tpo .deps/BitPage.Plo
/bin/sh ../libtool --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel  -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64   -DHDF5_FILE -DNETCDF_FILE  -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map  -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -MT BitTag.lo -MD -MP -MF .deps/BitTag.Tpo -c -o BitTag.lo BitTag.cpp
 g++ -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -MT BitTag.lo -MD -MP -MF .deps/BitTag.Tpo -c BitTag.cpp -o BitTag.o
mv -f .deps/BitTag.Tpo .deps/BitTag.Plo
/bin/sh ../libtool --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel  -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64   -DHDF5_FILE -DNETCDF_FILE  -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map  -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -MT BSPTree.lo -MD -MP -MF .deps/BSPTree.Tpo -c -o BSPTree.lo BSPTree.cpp
 g++ -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -MT BSPTree.lo -MD -MP -MF .deps/BSPTree.Tpo -c BSPTree.cpp -o BSPTree.o
BSPTree.cpp: In member function 'virtual moab::ErrorCode moab::BSPTreeBoxIter::calculate_polyhedron(moab::BSPTreePoly&) const':
BSPTree.cpp:1216: warning: dereferencing type-punned pointer will break strict-aliasing rules
mv -f .deps/BSPTree.Tpo .deps/BSPTree.Plo
/bin/sh ../libtool --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel  -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64   -DHDF5_FILE -DNETCDF_FILE  -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map  -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -MT BSPTreePoly.lo -MD -MP -MF .deps/BSPTreePoly.Tpo -c -o BSPTreePoly.lo BSPTreePoly.cpp
 g++ -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -MT BSPTreePoly.lo -MD -MP -MF .deps/BSPTreePoly.Tpo -c BSPTreePoly.cpp -o BSPTreePoly.o
mv -f .deps/BSPTreePoly.Tpo .deps/BSPTreePoly.Plo
/bin/sh ../libtool --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel  -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64   -DHDF5_FILE -DNETCDF_FILE  -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map  -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -MT CN.lo -MD -MP -MF .deps/CN.Tpo -c -o CN.lo CN.cpp
 g++ -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -MT CN.lo -MD -MP -MF .deps/CN.Tpo -c CN.cpp -o CN.o
mv -f .deps/CN.Tpo .deps/CN.Plo
/bin/sh ../libtool --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel  -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64   -DHDF5_FILE -DNETCDF_FILE  -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map  -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -MT CartVect.lo -MD -MP -MF .deps/CartVect.Tpo -c -o CartVect.lo CartVect.cpp
 g++ -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -MT CartVect.lo -MD -MP -MF .deps/CartVect.Tpo -c CartVect.cpp -o CartVect.o
mv -f .deps/CartVect.Tpo .deps/CartVect.Plo
/bin/sh ../libtool --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel  -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64   -DHDF5_FILE -DNETCDF_FILE  -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map  -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -MT Core.lo -MD -MP -MF .deps/Core.Tpo -c -o Core.lo Core.cpp
 g++ -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -MT Core.lo -MD -MP -MF .deps/Core.Tpo -c Core.cpp -o Core.o
mv -f .deps/Core.Tpo .deps/Core.Plo
/bin/sh ../libtool --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel  -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64   -DHDF5_FILE -DNETCDF_FILE  -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map  -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -MT DebugOutput.lo -MD -MP -MF .deps/DebugOutput.Tpo -c -o DebugOutput.lo DebugOutput.cpp
 g++ -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -MT DebugOutput.lo -MD -MP -MF .deps/DebugOutput.Tpo -c DebugOutput.cpp -o DebugOutput.o
mv -f .deps/DebugOutput.Tpo .deps/DebugOutput.Plo
/bin/sh ../libtool --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel  -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64   -DHDF5_FILE -DNETCDF_FILE  -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map  -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -MT DenseTag.lo -MD -MP -MF .deps/DenseTag.Tpo -c -o DenseTag.lo DenseTag.cpp
 g++ -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -Wno-long-long -O2 -DNDEBUG -MT DenseTag.lo -MD -MP -MF .deps/DenseTag.Tpo -c DenseTag.cpp -o DenseTag.o
DenseTag.cpp: In member function 'virtual moab::ErrorCode moab::DenseTag::set_data(moab::SequenceManager*, const moab::Range&, const void* const*, const int*)':
DenseTag.cpp:364: error: no matching function for call to 'min(unsigned int, long unsigned int)'

sincerely,
 -The Fathomatic

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