[MOAB-dev] buildbot failure in Fathom on moab-32bit

Sun Sep 26 00:07:20 CDT 2010

The Fathomatic has detected a failed build of moab-32bit on Fathom.
Full details are available at:
 http://gnep.mcs.anl.gov:8010/builders/moab-32bit/builds/245

Buildbot URL: http://gnep.mcs.anl.gov:8010/

Buildslave for this Build: gnep

Build Reason: The Nightly scheduler named 'nightly' triggered this build
Build Source Stamp: None
Blamelist: 

BUILD FAILED: failed compile

LOG EXCERPT:
 g++ -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I/home/jvporter/packages/netcdf-x86/include -I/home/jvporter/packages/hdf5-x86-serial/include -isystem /home/jvporter/packages/hdf5-x86-serial/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -O2 -DNDEBUG -m32 -MT UnstructuredElemSeq.lo -MD -MP -MF .deps/UnstructuredElemSeq.Tpo -c UnstructuredElemSeq.cpp -o UnstructuredElemSeq.o
mv -f .deps/UnstructuredElemSeq.Tpo .deps/UnstructuredElemSeq.Plo
/bin/sh ../libtool --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel  -I/home/jvporter/packages/netcdf-x86/include   -I/home/jvporter/packages/hdf5-x86-serial/include -isystem /home/jvporter/packages/hdf5-x86-serial/include  -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DHDF5_FILE -DNETCDF_FILE  -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map  -Wall -pipe -O2 -DNDEBUG -m32 -MT VertexSequence.lo -MD -MP -MF .deps/VertexSequence.Tpo -c -o VertexSequence.lo VertexSequence.cpp
 g++ -DHAVE_CONFIG_H -I. -I.. -I../src/moab -I../src/parallel -I/home/jvporter/packages/netcdf-x86/include -I/home/jvporter/packages/hdf5-x86-serial/include -isystem /home/jvporter/packages/hdf5-x86-serial/include -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I./io -I./io/mhdf/include -I./parallel -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -O2 -DNDEBUG -m32 -MT VertexSequence.lo -MD -MP -MF .deps/VertexSequence.Tpo -c VertexSequence.cpp -o VertexSequence.o
mv -f .deps/VertexSequence.Tpo .deps/VertexSequence.Plo
/bin/sh ../libtool --tag=CXX   --mode=link g++  -Wall -pipe -O2 -DNDEBUG -m32 -L/home/jvporter/packages/netcdf-x86/lib     -L/home/jvporter/packages/hdf5-x86-serial/lib -L/home/jvporter/packages/hdf5-x86-serial/lib   -L/home/jvporter/packages/hdf5-x86-serial/lib -o libMOAB.la -rpath /usr/local/lib AEntityFactory.lo BitTagServer.lo BSPTreePoly.lo DebugOutput.lo DualTool.lo EntitySequence.lo FileOptions.lo GeomTopoTool.lo HigherOrderFactory.lo HomXform.lo AdaptiveKDTree.lo AffineXform.lo AxisBox.lo BSPTree.lo CN.lo CartVect.lo Matrix3.lo Core.lo Factory.lo GeomUtil.lo MeshSet.lo OrientedBox.lo OrientedBoxTreeTool.lo Range.lo RangeSeqIntersectIter.lo ReadUtil.lo ReaderWriterSet.lo Skinner.lo SysUtil.lo Util.lo WriteUtil.lo MeshSetSequence.lo MeshTopoUtil.lo PolyElementSeq.lo ScdElementData.lo ScdVertexData.lo SequenceData.lo SequenceManager.lo SparseTagSuperCollection.lo SparseTagCollection.lo StructuredElementSeq.lo SweptElementData.lo SweptElementSeq.lo SweptVertexData.lo TagI
 nfo.lo TagServer.lo TypeSequenceManager.lo UnstructuredElemSeq.lo VertexSequence.lo io/libmoabio.la  -lm
mkdir .libs
rm -fr .libs/libMOAB.lax
mkdir .libs/libMOAB.lax
rm -fr .libs/libMOAB.lax/libmoabio.a
mkdir .libs/libMOAB.lax/libmoabio.a
(cd .libs/libMOAB.lax/libmoabio.a && ar x /disk/itaps-buildslave/moab-32bit/build/src/io/.libs/libmoabio.a)
ar cru .libs/libMOAB.a  AEntityFactory.o BitTagServer.o BSPTreePoly.o DebugOutput.o DualTool.o EntitySequence.o FileOptions.o GeomTopoTool.o HigherOrderFactory.o HomXform.o AdaptiveKDTree.o AffineXform.o AxisBox.o BSPTree.o CN.o CartVect.o Matrix3.o Core.o Factory.o GeomUtil.o MeshSet.o OrientedBox.o OrientedBoxTreeTool.o Range.o RangeSeqIntersectIter.o ReadUtil.o ReaderWriterSet.o Skinner.o SysUtil.o Util.o WriteUtil.o MeshSetSequence.o MeshTopoUtil.o PolyElementSeq.o ScdElementData.o ScdVertexData.o SequenceData.o SequenceManager.o SparseTagSuperCollection.o SparseTagCollection.o StructuredElementSeq.o SweptElementData.o SweptElementSeq.o SweptVertexData.o TagInfo.o TagServer.o TypeSequenceManager.o UnstructuredElemSeq.o VertexSequence.o  .libs/libMOAB.lax/libmoabio.a/nodes.o .libs/libMOAB.lax/libmoabio.a/WriteNCDF.o .libs/libMOAB.lax/libmoabio.a/ReadVtk.o .libs/libMOAB.lax/libmoabio.a/ReadSmf.o .libs/libMOAB.lax/libmoabio.a/ReadHDF5.o .libs/libMOAB.lax/libmoabio.a/GmshUtil
 .o .libs/libMOAB.lax/libmoabio.a/ReadNC.o .libs/libMOAB.lax/libmoabio.a/adjacency.o .libs/libMOAB.lax/libmoabio.a/ReadNCDF.o .libs/libMOAB.lax/libmoabio.a/ReadGmsh.o .libs/libMOAB.lax/libmoabio.a/ReadSTL.o .libs/libMOAB.lax/libmoabio.a/WriteGMV.o .libs/libMOAB.lax/libmoabio.a/ExoIIUtil.o .libs/libMOAB.lax/libmoabio.a/SMF_State.o .libs/libMOAB.lax/libmoabio.a/WriteTemplate.o .libs/libMOAB.lax/libmoabio.a/WriteSTL.o .libs/libMOAB.lax/libmoabio.a/WriteSmf.o .libs/libMOAB.lax/libmoabio.a/FileTokenizer.o .libs/libMOAB.lax/libmoabio.a/util.o .libs/libMOAB.lax/libmoabio.a/ReadMCNP5.o .libs/libMOAB.lax/libmoabio.a/WriteHDF5.o .libs/libMOAB.lax/libmoabio.a/file.o .libs/libMOAB.lax/libmoabio.a/file-handle.o .libs/libMOAB.lax/libmoabio.a/WriteGmsh.o .libs/libMOAB.lax/libmoabio.a/WriteSLAC.o .libs/libMOAB.lax/libmoabio.a/VtkUtil.o .libs/libMOAB.lax/libmoabio.a/WriteAns.o .libs/libMOAB.lax/libmoabio.a/IODebugTrack.o .libs/libMOAB.lax/libmoabio.a/ReadIDEAS.o .libs/libMOAB.lax/libmoabio.a/
 ReadSms.o .libs/libMOAB.lax/libmoabio.a/ReadABAQUS.o .libs/libMOAB.lax/libmoabio.a/connectivity.o .libs/libMOAB.lax/libmoabio.a/tags.o .libs/libMOAB.lax/libmoabio.a/WriteVtk.o .libs/libMOAB.lax/libmoabio.a/status.o .libs/libMOAB.lax/libmoabio.a/Tqdcfr.o .libs/libMOAB.lax/libmoabio.a/file-desc.o .libs/libMOAB.lax/libmoabio.a/ReadTetGen.o .libs/libMOAB.lax/libmoabio.a/sets.o .libs/libMOAB.lax/libmoabio.a/ReadNASTRAN.o .libs/libMOAB.lax/libmoabio.a/ReadHDF5Dataset.o 
ranlib .libs/libMOAB.a
rm -fr .libs/libMOAB.lax
creating libMOAB.la
(cd .libs && rm -f libMOAB.la && ln -s ../libMOAB.la libMOAB.la)
 ...
Making all in oldinc
make[5]: Entering directory `/disk/itaps-buildslave/moab-32bit/build/src/oldinc'
make[5]: Nothing to be done for `all'.
 ...
Making all in MeshFiles
make[3]: Entering directory `/disk/itaps-buildslave/moab-32bit/build/MeshFiles'
Making all in unittest
make[4]: Entering directory `/disk/itaps-buildslave/moab-32bit/build/MeshFiles/unittest'
Making all in io
make[5]: Entering directory `/disk/itaps-buildslave/moab-32bit/build/MeshFiles/unittest/io'
make[5]: Nothing to be done for `all'.
 ...
make[5]: Entering directory `/disk/itaps-buildslave/moab-32bit/build/MeshFiles/unittest'
make[5]: Nothing to be done for `all-am'.
 ...
make[4]: Entering directory `/disk/itaps-buildslave/moab-32bit/build/MeshFiles'
make[4]: Nothing to be done for `all-am'.
 ...
Making all in test
make[3]: Entering directory `/disk/itaps-buildslave/moab-32bit/build/test'
Making all in .
make[4]: Entering directory `/disk/itaps-buildslave/moab-32bit/build/test'
make[4]: Nothing to be done for `all-am'.
 ...
Making all in io
make[4]: Entering directory `/disk/itaps-buildslave/moab-32bit/build/test/io'
make[4]: Nothing to be done for `all'.
 ...
Making all in dual
make[4]: Entering directory `/disk/itaps-buildslave/moab-32bit/build/test/dual'
make[4]: Nothing to be done for `all'.
 ...
Making all in obb
make[4]: Entering directory `/disk/itaps-buildslave/moab-32bit/build/test/obb'
make[4]: Nothing to be done for `all'.
 ...
Making all in perf
make[4]: Entering directory `/disk/itaps-buildslave/moab-32bit/build/test/perf'
g++ -DHAVE_CONFIG_H -I. -I../.. -I../../src/moab -I../../src/parallel -I../../src  -I/home/jvporter/packages/netcdf-x86/include   -I/home/jvporter/packages/hdf5-x86-serial/include -isystem /home/jvporter/packages/hdf5-x86-serial/include  -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHAVE_VSNPRINTF -D_FILE_OFFSET_BITS=64 -DHDF5_FILE -DNETCDF_FILE -I../../src -I../../src/io/mhdf/include -I../../src -I../../itaps/imesh -I../../itaps -I../../itaps -I../../itaps/imesh -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map  -Wall -pipe -O2 -DNDEBUG -m32 -MT point_in_elem.o -MD -MP -MF .deps/point_in_elem.Tpo -c -o point_in_elem.o point_in_elem.cpp
mv -f .deps/point_in_elem.Tpo .deps/point_in_elem.Po
make[4]: *** No rule to make target `../../itaps/imesh/libiMesh.la', needed by `point_in_elem'.  Stop.

sincerely,
 -The Fathomatic