[MOAB-dev] MOAB/trunk build failure

Dmitry Karpeev karpeev at mcs.anl.gov
Fri Mar 12 07:16:01 CST 2010


I got r3599 and it builds without a problem.
Thanks!

Dmitry.

On Thu, Mar 11, 2010 at 10:56 PM, Jason Kraftcheck
<kraftche at cae.wisc.edu> wrote:
> Try it again with an updated version.  I noticed some bare '-I' flags in the
> compilation command.  Perhaps those were the problem.  If so, they should be
> fixed in r3597.  If it still doesn't work, please send me the Makefile.in
> and Makefile from the src/ directory.  Also, what version of automake are
> you using (automake --version)?
>
> thanks,
>
> - jason
>
>
>
>
> On 03/11/2010 08:15 PM, Dmitry Karpeev wrote:
>>
>> Beats me: I just checked out that version.
>> Here's the command and the output:
>>
>> svn co https://svn.mcs.anl.gov/repos/ITAPS/MOAB/trunk
>> ${FATHOM_DIR}/moab/trunk
>> Checked out revision 3596.
>>
>> This is followed by:
>> Running autoreconf -fi
>> Putting files in AC_CONFIG_AUX_DIR, `config'.
>> export CC=${MPI2_PREFIX}/bin/mpicc
>> export CXX=${MPI2_PREFIX}/bin/mpicxx
>> ./configure --with-mpi=${MPI2_PREFIX} --with-netcdf=${NETCDF_PREFIX}
>> --with-hdf5=${HDF5_PREFIX} --with-zlib=${ZLIB_PREFIX}
>> --with-szip=${SZIP_PREFIX} --disable-debug 2>&1 | tee configure.log
>> make 2>&1 | tee make.log
>>
>> which produces the error I sent earlier.
>> I don't specify at --prefix at configure time, but I don't see how
>> that would produce the error I observe.
>>
>> Thanks.
>> Dmitry.
>>
>>
>> On Thu, Mar 11, 2010 at 3:06 PM, Jason Kraftcheck<kraftche at cae.wisc.edu>
>>  wrote:
>>>
>>> Dmitry Karpeev wrote:
>>>>
>>>> I just tried building MOAB/trunk on cosmea and failed at the make stage.
>>>> configure and make logs are attached.
>>>> Might that be due to the recent source code rearrangements?
>>>>
>>>
>>> It looks like something did not get updated correctly in your source
>>> tree.
>>> Build fails with:
>>>
>>> MBCore.cpp(55): catastrophic error: could not open source file
>>> "WriteHDF5.hpp"
>>>  #  include "WriteHDF5.hpp"
>>>
>>> Build the compilation command includes:
>>>  -I./io
>>>
>>> which is where WriteHDF5.hpp should be.  So why do you not have a copy of
>>> WriteHDF5.hpp at that location?
>>>
>>> - jason
>>>
>>>
>
>


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