[MOAB-dev] buildbot failure in Fathom on moab-shared

[James Porter]

As you may have noticed, I added a shared build of MOAB to the Buildbot.
This is primarily to create a nightly .so for me to link against for
PyTAPS, which is also being tested now, but will also help us if our
plan is to make shared MOAB the default.

It looks like the issue here is memory corruption. From the log:

*** glibc detected
*** /nfs/mcs-homes15/jvporter/buildslave1/moab-shared/build/.libs/lt-tqdcfr: corrupted double-linked list: 0x00000000006449f0 ***
======= Backtrace: =========
/lib/libc.so.6[0x2aeb19b84663]
/lib/libc.so.6[0x2aeb19b86922]
/lib/libc.so.6(__libc_malloc+0x90)[0x2aeb19b88360]
/usr/lib/libhdf5-1.6.5.so.0(H5E_clear+0x60)[0x2aeb1a545610]
/usr/lib/libhdf5-1.6.5.so.0(H5Eget_auto+0x68)[0x2aeb1a545988]
/usr/lib/libhdf5-1.6.5.so.0(H5_term_library+0x99)[0x2aeb1a5226b9]
/lib/libc.so.6(__cxa_finalize+0x90)[0x2aeb19b47450]
/usr/lib/libhdf5-1.6.5.so.0[0x2aeb1a51c2e3]


There's some other stuff on the Buildbot site, so go check it out if you
need more info.

- Jim

On Sun, 2010-01-17 at 00:11 -0600, donotreply at mcs.anl.gov wrote:
> The Fathomatic has detected a failed build of moab-shared on Fathom.
> Full details are available at:
>  http://gnep.mcs.anl.gov:8010/builders/moab-shared/builds/1
> 
> Buildbot URL: http://gnep.mcs.anl.gov:8010/
> 
> Buildslave for this Build: gnep
> 
> Build Reason: The Nightly scheduler named 'nightly' triggered this build
> Build Source Stamp: None
> Blamelist: 
> 
> BUILD FAILED: failed test
> 
> LOG EXCERPT:
> Running test_sub_entity_type_knife ...
> Running test_sub_entity_type_hex ...
> Running test_sub_entity_indices_vtx ...
> Running test_sub_entity_indices_edge ...
> Running test_sub_entity_indices_tri ...
> Running test_sub_entity_indices_quad ...
> Running test_sub_entity_indices_tet ...
> Running test_sub_entity_indices_pyr ...
> Running test_sub_entity_indices_pri ...
> Running test_sub_entity_indices_hex ...
> Running test_side_number_tri ...
> Running test_side_number_quad ...
> Running test_side_number_tet ...
> Running test_side_number_pyr ...
> Running test_side_number_pri ...
> Running test_side_number_hex ...
> Running test_opposite_side_tri ...
> Running test_opposite_side_quad ...
> Running test_opposite_side_tet ...
> Running test_opposite_side_hex ...
> Running test_has_mid_nodes_edge ...
> Running test_has_mid_nodes_tri ...
> Running test_has_mid_nodes_quad ...
> Running test_has_mid_nodes_tet ...
> Running test_has_mid_nodes_pyr ...
> Running test_has_mid_nodes_pri ...
> Running test_has_mid_nodes_knife ...
> Running test_has_mid_nodes_hex ...
> Running test_sub_entity_nodes_tri_edges ...
> Running test_sub_entity_nodes_quad_edges ...
> Running test_sub_entity_nodes_tet_edges ...
> Running test_sub_entity_nodes_tet_faces ...
> Running test_sub_entity_nodes_pyr_edges ...
> Running test_sub_entity_nodes_pyr_faces ...
> Running test_sub_entity_nodes_pri_edges ...
> Running test_sub_entity_nodes_pri_faces ...
> Running test_sub_entity_nodes_kni_edges ...
> Running test_sub_entity_nodes_kni_faces ...
> Running test_sub_entity_nodes_hex_edges ...
> Running test_sub_entity_nodes_hex_faces ...
> Running test_ho_node_parent ...
> Running test_ho_node_index ...
> PASS: mbcn_test
> Running test_construct_from_hex ...
> Running test_cut_with_plane ...
> Running test_volume ...
> PASS: bsp_tree_poly_test
> ====================
> 1 of 25 tests failed
> ====================
> 
> sincerely,
>  -The Fathomatic