[MOAB-dev] MOAB check for x86 failed.

Tue Mar 31 03:17:37 CDT 2009

Making check in mhdf
make[1]: Entering directory `/home/jason/moab/test/x86/mhdf'
make[1]: Nothing to be done for `check'.
make[1]: Leaving directory `/home/jason/moab/test/x86/mhdf'
Making check in .
make[1]: Entering directory `/home/jason/moab/test/x86'
make  moab_test homxform_test scdseq_test tqdcfr test_adj seq_man_test geom_util_test xform_test obb_test vtk_test adaptive_kd_tree_tests bsp_tree_test file_options_test kd_tree_test var_len_test var_len_test_no_template tag_test mesh_set_test cub_file_test exodus_test mbcn_test kd_tree_tool kd_tree_time
make[2]: Entering directory `/home/jason/moab/test/x86'
make[2]: `homxform_test' is up to date.
make[2]: `scdseq_test' is up to date.
make[2]: `tqdcfr' is up to date.
make[2]: `test_adj' is up to date.
make[2]: `seq_man_test' is up to date.
make[2]: `geom_util_test' is up to date.
make[2]: `xform_test' is up to date.
make[2]: `obb_test' is up to date.
make[2]: `vtk_test' is up to date.
make[2]: `adaptive_kd_tree_tests' is up to date.
make[2]: `bsp_tree_test' is up to date.
make[2]: `file_options_test' is up to date.
make[2]: `kd_tree_test' is up to date.
make[2]: `var_len_test' is up to date.
make[2]: `var_len_test_no_template' is up to date.
make[2]: `tag_test' is up to date.
make[2]: `mesh_set_test' is up to date.
make[2]: `cub_file_test' is up to date.
make[2]: `exodus_test' is up to date.
make[2]: `mbcn_test' is up to date.
make[2]: `kd_tree_tool' is up to date.
make[2]: `kd_tree_time' is up to date.
make[2]: Leaving directory `/home/jason/moab/test/x86'
make  check-TESTS
make[2]: Entering directory `/home/jason/moab/test/x86'
Size of mConnMap = 10512
Size of mUpConnMap = 59904
Size of MBCN = 1

MB TEST PROGRAM:

Failed to load input file: ../src/test/mbtest1.g
Exodus reader supports subset read only by block ID.
/bin/sh: line 4: 32240 Aborted                 valgrind ${dir}$tst
FAIL: moab_test
All tests passed.
PASS: homxform_test
All tests passed.
PASS: scdseq_test
Usage: tqdcfr <cub_file_name>
Success.
Success.
PASS: tqdcfr
PASS: test_adj
Running test_basic ...
Running test_lower_bound ...
Running test_upper_bound ...
Running test_find ...
Running test_get_entities ...
Running test_insert_sequence_merge ...
Running test_insert_sequence_nomerge ...
Running test_remove_sequence ...
Running test_replace_subsequence ...
Running test_erase ...
Running test_find_free_handle ...
Running test_find_free_sequence ...
Running test_is_free_sequence ...
Running regression_svn1952 ...
Running regression_svn1958 ...
Running regression_svn1960 ...
ALL TESTS PASSED
PASS: seq_man_test
Running test_box_plane_overlap ...
Running test_box_linear_elem_overlap_tri ...
Running test_box_linear_elem_overlap_tet ...
Running test_box_linear_elem_overlap_hex ...
Running test_box_tri_overlap ...
Running test_box_tet_overlap ...
Running test_box_hex_overlap ...
Running test_ray_tri_intersect ...
Running test_closest_location_on_tri ...
Running test_closest_location_on_polygon ...
Running test_segment_box_intersect ...
Running test_closest_location_on_box ...
PASS: geom_util_test
PASS: xform_test
PASS: obb_test
API failed at line 848: MB_FAILURE (13)
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API failed at line 848: MB_FAILURE (13)
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API failed at line 848: MB_FAILURE (13)
Check failed at line 1199: bval
API failed at line 848: MB_FAILURE (13)
Check failed at line 1199: bval
API failed at line 848: MB_FAILURE (13)
Check failed at line 1199: bval
API failed at line 848: MB_FAILURE (13)
Check failed at line 1199: bval
API failed at line 848: MB_FAILURE (13)
Check failed at line 1199: bval
API failed at line 848: MB_FAILURE (13)
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API failed at line 848: MB_FAILURE (13)
Check failed at line 1199: bval
API failed at line 848: MB_FAILURE (13)
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API failed at line 848: MB_FAILURE (13)
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API failed at line 848: MB_FAILURE (13)
Check failed at line 1199: bval
API failed at line 848: MB_FAILURE (13)
Check failed at line 1199: bval
API failed at line 848: MB_FAILURE (13)
Check failed at line 1199: bval
API failed at line 848: MB_FAILURE (13)
Check failed at line 1199: bval
API failed at line 848: MB_FAILURE (13)
Check failed at line 1199: bval
API failed at line 848: MB_FAILURE (13)
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API failed at line 848: MB_FAILURE (13)
Check failed at line 1199: bval
API failed at line 848: MB_FAILURE (13)
Check failed at line 1199: bval
API failed at line 848: MB_FAILURE (13)
Check failed at line 1199: bval
API failed at line 848: MB_FAILURE (13)
Check failed at line 1199: bval
API failed at line 848: MB_FAILURE (13)
Check failed at line 1199: bval
API failed at line 848: MB_FAILURE (13)
Check failed at line 1199: bval
API failed at line 848: MB_FAILURE (13)
Check failed at line 1199: bval
API failed at line 848: MB_FAILURE (13)
Check failed at line 1199: bval
API failed at line 848: MB_FAILURE (13)
Check failed at line 1199: bval
API failed at line 848: MB_FAILURE (13)
Check failed at line 1199: bval
API failed at line 848: MB_FAILURE (13)
Check failed at line 1199: bval
API failed at line 848: MB_FAILURE (13)
Check failed at line 1199: bval
API failed at line 848: MB_FAILURE (13)
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API failed at line 848: MB_FAILURE (13)
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API failed at line 848: MB_FAILURE (13)
Check failed at line 1199: bval
API failed at line 848: MB_FAILURE (13)
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API failed at line 1320: MB_FAILURE (13)
Testing edge2...
Testing edge3...
Testing tri3...
Testing tri6...
Testing quad4...
Testing quad8...
Testing polygon...
Testing tet4...
Testing tet10...
Testing hex8...
Testing hex20...
Testing wedge...
Testing pyramid...
Testing structured_points_2d...
Testing structured_grid_2d...
Testing rectilinear_grid_2d...
Testing structured_points_3d...
Testing structured_grid_3d...
Testing rectilinear_grid_3d...
Testing scalar_attrib_1_bit...
Testing scalar_attrib_1_uchar...
Testing scalar_attrib_1_char...
Testing scalar_attrib_1_ushort...
Testing scalar_attrib_1_short...
Testing scalar_attrib_1_uint...
Testing scalar_attrib_1_int...
Testing scalar_attrib_1_ulong...
Testing scalar_attrib_1_long...
Testing scalar_attrib_1_float...
Testing scalar_attrib_1_double...
Testing scalar_attrib_4_bit...
Testing scalar_attrib_4_uchar...
Testing scalar_attrib_4_char...
Testing scalar_attrib_4_ushort...
Testing scalar_attrib_4_short...
Testing scalar_attrib_4_uint...
Testing scalar_attrib_4_int...
Testing scalar_attrib_4_ulong...
Testing scalar_attrib_4_long...
Testing scalar_attrib_4_float...
Testing scalar_attrib_4_double...
Testing vector_attrib_bit...
Testing vector_attrib_uchar...
Testing vector_attrib_char...
Testing vector_attrib_ushort...
Testing vector_attrib_short...
Testing vector_attrib_uint...
Testing vector_attrib_int...
Testing vector_attrib_ulong...
Testing vector_attrib_long...
Testing vector_attrib_float...
Testing vector_attrib_double...
Testing tensor_attrib_uchar...
Testing tensor_attrib_char...
Testing tensor_attrib_ushort...
Testing tensor_attrib_short...
Testing tensor_attrib_uint...
Testing tensor_attrib_int...
Testing tensor_attrib_ulong...
Testing tensor_attrib_long...
Testing tensor_attrib_float...
Testing tensor_attrib_double...
Testing subset...

FAILED TESTS:
	edge2
	edge3
	tri3
	tri6
	quad4
	quad8
	polygon
	tet4
	tet10
	hex8
	hex20
	wedge
	pyramid
	structured_points_2d
	structured_grid_2d
	rectilinear_grid_2d
	structured_points_3d
	structured_grid_3d
	rectilinear_grid_3d
	scalar_attrib_1_bit
	scalar_attrib_1_uchar
	scalar_attrib_1_char
	scalar_attrib_1_ushort
	scalar_attrib_1_short
	scalar_attrib_1_uint
	scalar_attrib_1_int
	scalar_attrib_1_ulong
	scalar_attrib_1_long
	scalar_attrib_1_float
	scalar_attrib_1_double
	scalar_attrib_4_bit
	scalar_attrib_4_uchar
	scalar_attrib_4_char
	scalar_attrib_4_ushort
	scalar_attrib_4_short
	scalar_attrib_4_uint
	scalar_attrib_4_int
	scalar_attrib_4_ulong
	scalar_attrib_4_long
	scalar_attrib_4_float
	scalar_attrib_4_double
	vector_attrib_bit
	vector_attrib_uchar
	vector_attrib_char
	vector_attrib_ushort
	vector_attrib_short
	vector_attrib_uint
	vector_attrib_int
	vector_attrib_ulong
	vector_attrib_long
	vector_attrib_float
	vector_attrib_double
	tensor_attrib_uchar
	tensor_attrib_char
	tensor_attrib_ushort
	tensor_attrib_short
	tensor_attrib_uint
	tensor_attrib_int
	tensor_attrib_ulong
	tensor_attrib_long
	tensor_attrib_float
	tensor_attrib_double
	subset
63 of 63 tests failed

FAIL: vtk_test
PASS: adaptive_kd_tree_tests
Running test_iterator ...
Running test_box_iterator ...
Running test_tree_create ...
Running test_box_tree_create ...
Running test_leaf_containing_point_bounded_tree ...
Running test_leaf_containing_point_unbounded_tree ...
Running test_merge_leaf ...
PASS: bsp_tree_test
PASS: file_options_test
==32329== Invalid read of size 4
==32329==    at 0x8109B24: ReadHDF5::load_file(char const*, unsigned&, FileOptions const&, char const*, int const*, int) (ReadHDF5.cpp:133)
==32329==    by 0x806CC49: MBCore::serial_load_file(char const*, unsigned&, FileOptions const&, char const*, int const*, int) (MBCore.cpp:421)
==32329==    by 0x806CE08: MBCore::load_file(char const*, unsigned&, char const*, char const*, int const*, int) (MBCore.cpp:397)
==32329==    by 0x8062FF1: MBCore::load_mesh(char const*, int const*, int) (MBCore.cpp:357)
==32329==    by 0x804E83C: main (kd_tree_test.cpp:124)
==32329==  Address 0x0 is not stack'd, malloc'd or (recently) free'd
==32329== 
==32329== Process terminating with default action of signal 11 (SIGSEGV)
==32329==  Access not within mapped region at address 0x0
==32329==    at 0x8109B24: ReadHDF5::load_file(char const*, unsigned&, FileOptions const&, char const*, int const*, int) (ReadHDF5.cpp:133)
==32329==    by 0x806CC49: MBCore::serial_load_file(char const*, unsigned&, FileOptions const&, char const*, int const*, int) (MBCore.cpp:421)
==32329==    by 0x806CE08: MBCore::load_file(char const*, unsigned&, char const*, char const*, int const*, int) (MBCore.cpp:397)
==32329==    by 0x8062FF1: MBCore::load_mesh(char const*, int const*, int) (MBCore.cpp:357)
==32329==    by 0x804E83C: main (kd_tree_test.cpp:124)
/bin/sh: line 4: 32329 Segmentation fault      valgrind ${dir}$tst
FAIL: kd_tree_test
Running test_valid_struct ...
Running test_inline ...
Running test_non_inline ...
Running test_resize_ii ...
Running test_resize_in ...
Running test_resize_ni ...
Running test_resize_nn ...
PASS: var_len_test
Running test_valid_struct ...
Running test_inline ...
Running test_non_inline ...
Running test_resize_ii ...
Running test_resize_in ...
Running test_resize_ni ...
Running test_resize_nn ...
PASS: var_len_test_no_template
Running test_create_tag ...
Running test_invalid_tag_size ...
Running test_get_set_sparse_int ...
Running test_get_set_dense_int ...
Running test_get_set_dense_double ...
Running test_get_set_bit ...
Running test_get_by_tag ...
Running test_get_by_tag_value ...
Running test_mesh_value ...
Running test_get_pointers_sparse ...
Running test_get_pointers_dense ...
Running test_set_pointers_sparse ...
Running test_set_pointers_dense ...
Running test_get_entity_tags ...
Running test_delete_sparse_tag ...
Running test_delete_dense_tag ...
Running test_delete_mesh_tag ...
Running test_delete_sparse_data ...
Running test_delete_dense_data ...
Running test_delete_bit_data ...
Running test_create_variable_length_tag ...
Running test_get_set_variable_length_sparse ...
Running test_get_set_variable_length_dense ...
Running test_get_set_variable_length_mesh ...
Running regression_one_entity_by_var_tag ...
Running regression_tag_on_nonexistent_entity ...
PASS: tag_test
Running test_add_entities_ordered ...
Running test_add_entities_set ...
Running test_add_entities_ordered_tracking ...
Running test_add_entities_set_tracking ...
Running test_remove_entities_ordered ...
Running test_remove_entities_set ...
Running test_remove_entities_ordered_tracking ...
Running test_remove_entities_set_tracking ...
Running test_entities_by_type_ordered ...
Running test_entities_by_type_set ...
Running test_entities_by_dim_ordered ...
Running test_entities_by_dim_set ...
Running test_subtract_set_set ...
Running test_subtract_set_ordered ...
Running test_subtract_ordered_set ...
Running test_subtract_ordered_ordered ...
Running test_subtract_set_set_tracking ...
Running test_subtract_set_ordered_tracking ...
Running test_subtract_ordered_set_tracking ...
Running test_subtract_ordered_ordered_tracking ...
Running test_itersect_set_set ...
Running test_itersect_set_ordered ...
Running test_itersect_ordered_set ...
Running test_itersect_ordered_ordered ...
Running test_itersect_set_set_tracking ...
Running test_itersect_set_ordered_tracking ...
Running test_itersect_ordered_set_tracking ...
Running test_itersect_ordered_ordered_tracking ...
Running test_unite_set_set ...
Running test_unite_set_ordered ...
Running test_unite_ordered_set ...
Running test_unite_ordered_ordered ...
Running test_unite_set_set_tracking ...
Running test_unite_set_ordered_tracking ...
Running test_unite_ordered_set_tracking ...
Running test_unite_ordered_ordered_tracking ...
Running test_contains_entities_ordered ...
Running test_contains_entities_set ...
Running test_clear_ordered ...
Running test_clear_set ...
Running test_clear_ordered_tracking ...
Running test_clear_set_tracking ...
ALL TESTS PASSED
PASS: mesh_set_test
Running test_vertices ...
Running test_edges ...
Running test_quads ...
Running test_hexes ...
Running test_geometric_topology ...
Running test_geometric_sets ...
Running test_blocks ...
Running test_side_sets ...
Running test_node_sets ...
Running test_file_set ...
Running test_tri6 ...
Running test_tri7 ...
Running test_quad5 ...
Running test_quad8 ...
Running test_quad9 ...
Running test_tet8 ...
Running test_tet10 ...
Running test_tet14 ...
Running test_hex9 ...
Running test_hex20 ...
Running test_hex27 ...
Running test_multiple_files ...
PASS: cub_file_test
==32361== Invalid read of size 1
==32361==    at 0x46DF77B: strcmp (mc_replace_strmem.c:337)
==32361==    by 0x80DB7C8: ReadNCDF::load_file(char const*, unsigned&, FileOptions const&, char const*, int const*, int) (ReadNCDF.cpp:441)
==32361==    by 0x804D467: read_file(MBInterface&, char const*) (exodus_test.cc:81)
==32361==    by 0x804DFBC: test_ho_elements(MBEntityType, int) (exodus_test.cc:228)
==32361==    by 0x804E269: test_tri6() (exodus_test.cc:40)
==32361==    by 0x804E37E: run_test(void (*)(), char const*) (TestUtil.hpp:292)
==32361==    by 0x804E3FB: main (exodus_test.cc:59)
==32361==  Address 0x0 is not stack'd, malloc'd or (recently) free'd
Running test_tri6 ...
  test_tri6: TERMINATED (signal 11)
Running test_tri7 ...
  test_tri7: TERMINATED (signal 11)
Running test_quad5 ...
  test_quad5: TERMINATED (signal 11)
Running test_quad8 ...
  test_quad8: TERMINATED (signal 11)
Running test_quad9 ...
  test_quad9: TERMINATED (signal 11)
Running test_tet8 ...
  test_tet8: TERMINATED (signal 11)
Running test_tet10 ...
  test_tet10: TERMINATED (signal 11)
Running test_tet14 ...
  test_tet14: TERMINATED (signal 11)
Running test_hex9 ...
  test_hex9: TERMINATED (signal 11)
Running test_hex20 ...
  test_hex20: TERMINATED (signal 11)
Running test_hex27 ...
  test_hex27: TERMINATED (signal 11)
FAIL: exodus_test
Running test_dimension_pair ...
Running test_type_names ...
Running test_dimension ...
Running test_vertices_per_entity ...
Running test_num_sub_entities ...
Running test_sub_entity_type_vtx ...
Running test_sub_entity_type_edge ...
Running test_sub_entity_type_tri ...
Running test_sub_entity_type_quad ...
Running test_sub_entity_type_tet ...
Running test_sub_entity_type_pyr ...
Running test_sub_entity_type_pri ...
Running test_sub_entity_type_knife ...
Running test_sub_entity_type_hex ...
Running test_sub_entity_indices_vtx ...
Running test_sub_entity_indices_edge ...
Running test_sub_entity_indices_tri ...
Running test_sub_entity_indices_quad ...
Running test_sub_entity_indices_tet ...
Running test_sub_entity_indices_pyr ...
Running test_sub_entity_indices_pri ...
Running test_sub_entity_indices_hex ...
Running test_side_number_tri ...
Running test_side_number_quad ...
Running test_side_number_tet ...
Running test_side_number_pyr ...
Running test_side_number_pri ...
Running test_side_number_hex ...
Running test_opposite_side_tri ...
Running test_opposite_side_quad ...
Running test_opposite_side_tet ...
Running test_opposite_side_hex ...
Running test_has_mid_nodes_edge ...
Running test_has_mid_nodes_tri ...
Running test_has_mid_nodes_quad ...
Running test_has_mid_nodes_tet ...
Running test_has_mid_nodes_pyr ...
Running test_has_mid_nodes_pri ...
Running test_has_mid_nodes_knife ...
Running test_has_mid_nodes_hex ...
Running test_sub_entity_nodes_tri_edges ...
Running test_sub_entity_nodes_quad_edges ...
Running test_sub_entity_nodes_tet_edges ...
Running test_sub_entity_nodes_tet_faces ...
Running test_sub_entity_nodes_pyr_edges ...
Running test_sub_entity_nodes_pyr_faces ...
Running test_sub_entity_nodes_pri_edges ...
Running test_sub_entity_nodes_pri_faces ...
Running test_sub_entity_nodes_kni_edges ...
Running test_sub_entity_nodes_kni_faces ...
Running test_sub_entity_nodes_hex_edges ...
Running test_sub_entity_nodes_hex_faces ...
Running test_ho_node_parent ...
Running test_ho_node_index ...
PASS: mbcn_test
====================
4 of 21 tests failed
====================
make[2]: *** [check-TESTS] Error 1
make[2]: Leaving directory `/home/jason/moab/test/x86'
make[1]: *** [check-am] Error 2
make[1]: Leaving directory `/home/jason/moab/test/x86'
make: *** [check-recursive] Error 1

[MOAB-dev] MOAB check for *x86* failed.

[MOAB-dev] MOAB check for x86 failed.