[MOAB-dev] MOAB check for *x86* failed.

Nightly Test kraftche at cae.wisc.edu
Thu Jul 10 02:01:40 CDT 2008


configure: WARNING: unknown Fortran name-mangling scheme
../../src/mhdf/src/connectivity.c: In function 'mhdf_writeConnectivity':
../../src/mhdf/src/connectivity.c:141: error: 'H5P_DEFAULT' undeclared (first use in this function)
../../src/mhdf/src/connectivity.c:141: error: (Each undeclared identifier is reported only once
../../src/mhdf/src/connectivity.c:141: error: for each function it appears in.)
../../src/mhdf/src/connectivity.c: In function 'mhdf_readConnectivity':
../../src/mhdf/src/connectivity.c:167: error: 'H5P_DEFAULT' undeclared (first use in this function)
../../src/mhdf/src/connectivity.c: In function 'mhdf_writePolyConnIndices':
../../src/mhdf/src/connectivity.c:345: error: 'H5P_DEFAULT' undeclared (first use in this function)
../../src/mhdf/src/connectivity.c: In function 'mhdf_readPolyConnIndices':
../../src/mhdf/src/connectivity.c:371: error: 'H5P_DEFAULT' undeclared (first use in this function)
../../src/mhdf/src/connectivity.c: In function 'mhdf_writePolyConnIDs':
../../src/mhdf/src/connectivity.c:397: error: 'H5P_DEFAULT' undeclared (first use in this function)
../../src/mhdf/src/connectivity.c: In function 'mhdf_readPolyConnIDs':
../../src/mhdf/src/connectivity.c:423: error: 'H5P_DEFAULT' undeclared (first use in this function)
../../src/mhdf/src/adjacency.c: In function 'mhdf_writeAdjacency':
../../src/mhdf/src/adjacency.c:168: error: 'H5P_DEFAULT' undeclared (first use in this function)
../../src/mhdf/src/adjacency.c:168: error: (Each undeclared identifier is reported only once
../../src/mhdf/src/adjacency.c:168: error: for each function it appears in.)
../../src/mhdf/src/adjacency.c: In function 'mhdf_readAdjacency':
../../src/mhdf/src/adjacency.c:195: error: 'H5P_DEFAULT' undeclared (first use in this function)
make[2]: *** [connectivity.lo] Error 1
make[2]: *** Waiting for unfinished jobs....
make[2]: *** [adjacency.lo] Error 1
../../src/mhdf/src/tags.c: In function 'mhdf_writeDenseTag':
../../src/mhdf/src/tags.c:1425: error: 'H5P_DEFAULT' undeclared (first use in this function)
../../src/mhdf/src/tags.c:1425: error: (Each undeclared identifier is reported only once
../../src/mhdf/src/tags.c:1425: error: for each function it appears in.)
../../src/mhdf/src/tags.c: In function 'mhdf_readDenseTag':
../../src/mhdf/src/tags.c:1470: error: 'H5P_DEFAULT' undeclared (first use in this function)
../../src/mhdf/src/tags.c: In function 'mhdf_writeSparseTagEntities':
../../src/mhdf/src/tags.c:1713: error: 'H5P_DEFAULT' undeclared (first use in this function)
../../src/mhdf/src/tags.c: In function 'mhdf_writeSparseTagValues':
../../src/mhdf/src/tags.c:1739: error: 'H5P_DEFAULT' undeclared (first use in this function)
../../src/mhdf/src/tags.c: In function 'mhdf_writeSparseTagIndices':
../../src/mhdf/src/tags.c:1784: error: 'H5P_DEFAULT' undeclared (first use in this function)
../../src/mhdf/src/tags.c: In function 'mhdf_readSparseTagEntities':
../../src/mhdf/src/tags.c:1810: error: 'H5P_DEFAULT' undeclared (first use in this function)
../../src/mhdf/src/tags.c: In function 'mhdf_readSparseTagValues':
../../src/mhdf/src/tags.c:1836: error: 'H5P_DEFAULT' undeclared (first use in this function)
../../src/mhdf/src/tags.c: In function 'mhdf_readSparseTagIndices':
../../src/mhdf/src/tags.c:1880: error: 'H5P_DEFAULT' undeclared (first use in this function)
make[2]: *** [tags.lo] Error 1
make[1]: *** [all-recursive] Error 1
make: *** [all] Error 2
 cc supports -c -o file.o... yes
checking whether the cc linker (/usr/bin/ld -m elf_i386) supports shared libraries... yes
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... no
checking whether to build static libraries... yes
configure: creating libtool
appending configuration tag "CXX" to libtool
checking for ld used by c++... /usr/bin/ld -m elf_i386
checking if the linker (/usr/bin/ld -m elf_i386) is GNU ld... yes
checking whether the c++ linker (/usr/bin/ld -m elf_i386) supports shared libraries... yes
checking for c++ option to produce PIC... -fPIC
checking if c++ PIC flag -fPIC works... yes
checking if c++ static flag -static works... yes
checking if c++ supports -c -o file.o... yes
checking whether the c++ linker (/usr/bin/ld -m elf_i386) supports shared libraries... yes
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
appending configuration tag "F77" to libtool
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... no
checking whether to build static libraries... yes
checking for gfortran option to produce PIC... -fPIC
checking if gfortran PIC flag -fPIC works... yes
checking if gfortran static flag -static works... yes
checking if gfortran supports -c -o file.o... yes
checking whether the gfortran linker (/usr/bin/ld -m elf_i386) supports shared libraries... yes
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking for gunzip... gunzip -c
checking for gzip... (cached) gunzip -c
checking for zcat... (cached) gunzip -c
checking if C++ compiler supports template specialization... yes
checking how to get verbose linking output from gfortran... -v
checking for Fortran libraries of gfortran...  -L/usr/lib/gcc/x86_64-linux-gnu/4.3.1 -L/usr/lib/gcc/x86_64-linux-gnu/4.3.1/../../../../lib -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.3.1/../../.. -lgfortranbegin -lgfortran -lm
checking for dummy main to link with Fortran libraries... none
checking for Fortran name-mangling scheme... unknown
checking for inttypes.h... (cached) yes
checking for stdint.h... (cached) yes
checking for sys/types.h... (cached) yes
checking stddef.h usability... yes
checking stddef.h presence... yes
checking for stddef.h... yes
checking for stdlib.h... (cached) yes
checking for size_t... yes
checking for ptrdiff_t... yes
checking ieeefp.h usability... no
checking ieeefp.h presence... no
checking for ieeefp.h... no
checking for deflate in -lz... yes
checking for SZ_Decompress in -lsz... no
checking if HDF5 support is enabled... yes
checking hdf5.h usability... yes
checking hdf5.h presence... yes
checking for hdf5.h... yes
checking for H5Fopen in -lhdf5... yes
checking if NetCDF support is enabled... yes
checking strstream.h usability... no
checking strstream.h presence... no
checking for strstream.h... no
checking sstream.h usability... no
checking sstream.h presence... no
checking for sstream.h... no
checking strstream usability... yes
checking strstream presence... yes
checking for strstream... yes
checking netcdf.h usability... yes
checking netcdf.h presence... yes
checking for netcdf.h... yes
checking for netcdf.hh... yes
checking for netcdf_c++ library... yes
checking if mbconvert is to be built... yes
checking if hexmodops is to be built... yes
checking if mbchaco is to be built... no
checking if mbperf is to be built... yes
checking if qvdual is to be built... no
checking if mbsize is to be built... yes
checking if mbskin is to be built... yes
checking if mbtagprop is to be built... yes
checking if mcnpmit is to be built... no
checking if mbcoupler is to be built... no
checking if spheredecomp is to be built... yes
checking if mbsurfplot is to be built... yes
checking if mbzoltan is to be built... no
checking if dagmc is to be built... yes
checking if iMesh support is to be built... yes
checking for /opt/babel-0.10.10-32-c2/bin/babel... yes
configure: creating ./config.status
C:   cc  -Wall -pipe -g -m32
C++: c++  -Wall -pipe -g -m32
Fortran: gfortran -g -O2 -g
 /bin/sh ./config.status
config.status: creating Makefile
config.status: creating moab.make
config.status: creating testdir.h
config.status: creating parallel/Makefile
config.status: creating mhdf/Makefile
config.status: creating test/Makefile
config.status: creating test/h5file/Makefile
config.status: creating test/dual/Makefile
config.status: creating test/obb/Makefile
config.status: creating test/perf/Makefile
config.status: creating tools/Makefile
config.status: creating tools/converter/Makefile
config.status: creating tools/hexmodops/Makefile
config.status: creating tools/iMesh/Makefile
config.status: creating tools/iMesh/iMesh-Defs.inc
config.status: creating tools/iMesh/SIDL/iMesh-SIDL-Defs.inc
config.status: creating tools/iMesh/SIDL/Makefile
config.status: creating tools/iMesh/SIDL/common.make
config.status: creating tools/mbperf/Makefile
config.status: creating tools/mbchaco/Makefile
config.status: creating tools/mbcoupler/Makefile
config.status: creating tools/mbzoltan/Config.moab
config.status: creating tools/mbzoltan/Makefile
config.status: creating tools/mcnpmit/Makefile
config.status: creating tools/qvdual/Makefile
config.status: creating tools/size/Makefile
config.status: creating tools/skin/Makefile
config.status: creating tools/tagprop/Makefile
config.status: creating tools/spheredecomp/Makefile
config.status: creating tools/surfplot/Makefile
config.status: creating tools/dagmc/Makefile
config.status: creating tools/dagmc/dagmc.make
config.status: creating doc/Makefile
config.status: creating doxygen/Makefile
config.status: creating config.h
config.status: config.h is unchanged
config.status: creating MBVersion.h
config.status: MBVersion.h is unchanged
config.status: creating MBEntityHandle.h
config.status: MBEntityHandle.h is unchanged
config.status: creating MBCN_FCDefs.h
config.status: MBCN_FCDefs.h is unchanged
config.status: executing depfiles commands
make  all-recursive
make[1]: Entering directory `/home/jason/moab/test/x86'
Making all in mhdf
make[2]: Entering directory `/home/jason/moab/test/x86/mhdf'
if /bin/sh ../libtool --tag=CC --mode=compile cc -I../../src/mhdf/include  -I. -I../../src/mhdf -I.. -I.. -I.. -I..  -I/opt/netcdf-3.6.1-32-c2/include  -I/opt/hdf5-1.6.5-32-c2/include    -Wall -pipe -g -m32 -MT adjacency.lo -MD -MP -MF ".deps/adjacency.Tpo" -c -o adjacency.lo `test -f 'src/adjacency.c' || echo '../../src/mhdf/'`src/adjacency.c; \
	then mv -f ".deps/adjacency.Tpo" ".deps/adjacency.Plo"; else rm -f ".deps/adjacency.Tpo"; exit 1; fi
if /bin/sh ../libtool --tag=CC --mode=compile cc -I../../src/mhdf/include  -I. -I../../src/mhdf -I.. -I.. -I.. -I..  -I/opt/netcdf-3.6.1-32-c2/include  -I/opt/hdf5-1.6.5-32-c2/include    -Wall -pipe -g -m32 -MT connectivity.lo -MD -MP -MF ".deps/connectivity.Tpo" -c -o connectivity.lo `test -f 'src/connectivity.c' || echo '../../src/mhdf/'`src/connectivity.c; \
	then mv -f ".deps/connectivity.Tpo" ".deps/connectivity.Plo"; else rm -f ".deps/connectivity.Tpo"; exit 1; fi
if /bin/sh ../libtool --tag=CC --mode=compile cc -I../../src/mhdf/include  -I. -I../../src/mhdf -I.. -I.. -I.. -I..  -I/opt/netcdf-3.6.1-32-c2/include  -I/opt/hdf5-1.6.5-32-c2/include    -Wall -pipe -g -m32 -MT file-handle.lo -MD -MP -MF ".deps/file-handle.Tpo" -c -o file-handle.lo `test -f 'src/file-handle.c' || echo '../../src/mhdf/'`src/file-handle.c; \
	then mv -f ".deps/file-handle.Tpo" ".deps/file-handle.Plo"; else rm -f ".deps/file-handle.Tpo"; exit 1; fi
if /bin/sh ../libtool --tag=CC --mode=compile cc -I../../src/mhdf/include  -I. -I../../src/mhdf -I.. -I.. -I.. -I..  -I/opt/netcdf-3.6.1-32-c2/include  -I/opt/hdf5-1.6.5-32-c2/include    -Wall -pipe -g -m32 -MT file.lo -MD -MP -MF ".deps/file.Tpo" -c -o file.lo `test -f 'src/file.c' || echo '../../src/mhdf/'`src/file.c; \
	then mv -f ".deps/file.Tpo" ".deps/file.Plo"; else rm -f ".deps/file.Tpo"; exit 1; fi
if /bin/sh ../libtool --tag=CC --mode=compile cc -I../../src/mhdf/include  -I. -I../../src/mhdf -I.. -I.. -I.. -I..  -I/opt/netcdf-3.6.1-32-c2/include  -I/opt/hdf5-1.6.5-32-c2/include    -Wall -pipe -g -m32 -MT nodes.lo -MD -MP -MF ".deps/nodes.Tpo" -c -o nodes.lo `test -f 'src/nodes.c' || echo '../../src/mhdf/'`src/nodes.c; \
	then mv -f ".deps/nodes.Tpo" ".deps/nodes.Plo"; else rm -f ".deps/nodes.Tpo"; exit 1; fi
if /bin/sh ../libtool --tag=CC --mode=compile cc -I../../src/mhdf/include  -I. -I../../src/mhdf -I.. -I.. -I.. -I..  -I/opt/netcdf-3.6.1-32-c2/include  -I/opt/hdf5-1.6.5-32-c2/include    -Wall -pipe -g -m32 -MT sets.lo -MD -MP -MF ".deps/sets.Tpo" -c -o sets.lo `test -f 'src/sets.c' || echo '../../src/mhdf/'`src/sets.c; \
	then mv -f ".deps/sets.Tpo" ".deps/sets.Plo"; else rm -f ".deps/sets.Tpo"; exit 1; fi
if /bin/sh ../libtool --tag=CC --mode=compile cc -I../../src/mhdf/include  -I. -I../../src/mhdf -I.. -I.. -I.. -I..  -I/opt/netcdf-3.6.1-32-c2/include  -I/opt/hdf5-1.6.5-32-c2/include    -Wall -pipe -g -m32 -MT status.lo -MD -MP -MF ".deps/status.Tpo" -c -o status.lo `test -f 'src/status.c' || echo '../../src/mhdf/'`src/status.c; \
	then mv -f ".deps/status.Tpo" ".deps/status.Plo"; else rm -f ".deps/status.Tpo"; exit 1; fi
if /bin/sh ../libtool --tag=CC --mode=compile cc -I../../src/mhdf/include  -I. -I../../src/mhdf -I.. -I.. -I.. -I..  -I/opt/netcdf-3.6.1-32-c2/include  -I/opt/hdf5-1.6.5-32-c2/include    -Wall -pipe -g -m32 -MT tags.lo -MD -MP -MF ".deps/tags.Tpo" -c -o tags.lo `test -f 'src/tags.c' || echo '../../src/mhdf/'`src/tags.c; \
	then mv -f ".deps/tags.Tpo" ".deps/tags.Plo"; else rm -f ".deps/tags.Tpo"; exit 1; fi
 cc -I../../src/mhdf/include -I. -I../../src/mhdf -I.. -I.. -I.. -I.. -I/opt/netcdf-3.6.1-32-c2/include -I/opt/hdf5-1.6.5-32-c2/include -Wall -pipe -g -m32 -MT nodes.lo -MD -MP -MF .deps/nodes.Tpo -c ../../src/mhdf/src/nodes.c -o nodes.o
 cc -I../../src/mhdf/include -I. -I../../src/mhdf -I.. -I.. -I.. -I.. -I/opt/netcdf-3.6.1-32-c2/include -I/opt/hdf5-1.6.5-32-c2/include -Wall -pipe -g -m32 -MT file-handle.lo -MD -MP -MF .deps/file-handle.Tpo -c ../../src/mhdf/src/file-handle.c -o file-handle.o
 cc -I../../src/mhdf/include -I. -I../../src/mhdf -I.. -I.. -I.. -I.. -I/opt/netcdf-3.6.1-32-c2/include -I/opt/hdf5-1.6.5-32-c2/include -Wall -pipe -g -m32 -MT file.lo -MD -MP -MF .deps/file.Tpo -c ../../src/mhdf/src/file.c -o file.o
 cc -I../../src/mhdf/include -I. -I../../src/mhdf -I.. -I.. -I.. -I.. -I/opt/netcdf-3.6.1-32-c2/include -I/opt/hdf5-1.6.5-32-c2/include -Wall -pipe -g -m32 -MT sets.lo -MD -MP -MF .deps/sets.Tpo -c ../../src/mhdf/src/sets.c -o sets.o
 cc -I../../src/mhdf/include -I. -I../../src/mhdf -I.. -I.. -I.. -I.. -I/opt/netcdf-3.6.1-32-c2/include -I/opt/hdf5-1.6.5-32-c2/include -Wall -pipe -g -m32 -MT adjacency.lo -MD -MP -MF .deps/adjacency.Tpo -c ../../src/mhdf/src/adjacency.c -o adjacency.o
 cc -I../../src/mhdf/include -I. -I../../src/mhdf -I.. -I.. -I.. -I.. -I/opt/netcdf-3.6.1-32-c2/include -I/opt/hdf5-1.6.5-32-c2/include -Wall -pipe -g -m32 -MT connectivity.lo -MD -MP -MF .deps/connectivity.Tpo -c ../../src/mhdf/src/connectivity.c -o connectivity.o
if /bin/sh ../libtool --tag=CC --mode=compile cc -I../../src/mhdf/include  -I. -I../../src/mhdf -I.. -I.. -I.. -I..  -I/opt/netcdf-3.6.1-32-c2/include  -I/opt/hdf5-1.6.5-32-c2/include    -Wall -pipe -g -m32 -MT util.lo -MD -MP -MF ".deps/util.Tpo" -c -o util.lo `test -f 'src/util.c' || echo '../../src/mhdf/'`src/util.c; \
	then mv -f ".deps/util.Tpo" ".deps/util.Plo"; else rm -f ".deps/util.Tpo"; exit 1; fi
 cc -I../../src/mhdf/include -I. -I../../src/mhdf -I.. -I.. -I.. -I.. -I/opt/netcdf-3.6.1-32-c2/include -I/opt/hdf5-1.6.5-32-c2/include -Wall -pipe -g -m32 -MT tags.lo -MD -MP -MF .deps/tags.Tpo -c ../../src/mhdf/src/tags.c -o tags.o
 cc -I../../src/mhdf/include -I. -I../../src/mhdf -I.. -I.. -I.. -I.. -I/opt/netcdf-3.6.1-32-c2/include -I/opt/hdf5-1.6.5-32-c2/include -Wall -pipe -g -m32 -MT status.lo -MD -MP -MF .deps/status.Tpo -c ../../src/mhdf/src/status.c -o status.o
 cc -I../../src/mhdf/include -I. -I../../src/mhdf -I.. -I.. -I.. -I.. -I/opt/netcdf-3.6.1-32-c2/include -I/opt/hdf5-1.6.5-32-c2/include -Wall -pipe -g -m32 -MT util.lo -MD -MP -MF .deps/util.Tpo -c ../../src/mhdf/src/util.c -o util.o
make[2]: Leaving directory `/home/jason/moab/test/x86/mhdf'
make[1]: Leaving directory `/home/jason/moab/test/x86'




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