itaps-parallel [Fwd: Re: problem with data]

Tim Tautges tautges at mcs.anl.gov
Fri Nov 14 09:38:36 CST 2008 

I don't get that behavior.  Are you sure it's something wrong with the 
iBase.h and not the application?  I've compiled all the Example 
applications with C using the original enum definition...

- tim

Mark Miller wrote:
> I found this in working with FMDB but then thought it might be important
> to people in general...
> 
> 
> 
> ------------------------------------------------------------------------
> 
> Subject:
> Re: problem with data
> From:
> Mark Miller <miller86 at llnl.gov>
> Date:
> Fri, 14 Nov 2008 06:07:29 -0800
> To:
> txie at scorec.rpi.edu
> 
> To:
> txie at scorec.rpi.edu
> CC:
> Onkar Sahni <osahni at scorec.rpi.edu>
> 
> 
> enum def'n in iBase.h are somehow incompatibile with C compiler.
> 
> I modified hello_iMeshP.c with iMeshP_getAllVtxCoords and needed
> iBase_StorageOrder. However, when I tried to compile with C compiler on
> mesh machine, it would fail...
> 
>   typedef enum {
>     iBase_BLOCKED,
>     iBase_INTERLEAVED,
>     iBase_UNDETERMINED
>   } iBase_StorageOrder;
> 
> hello_iMeshP.c: In function ‘main’:
> hello_iMeshP.c:54: error: ‘iBase_StorageOrder’ undeclared (first use in
> this function)
> hello_iMeshP.c:54: error: (Each undeclared identifier is reported only
> once
> hello_iMeshP.c:54: error: for each function it appears in.)
> hello_iMeshP.c:54: error: expected ‘;’ before ‘storageOrder2’
> hello_iMeshP.c:56: error: ‘storageOrder2’ undeclared (first use in this
> function)
> 
> To correct it, I think all the enums in iBase.h need to be re-formatted
> like so...
> 
>   typedef enum {
>     iBase_BLOCKED,
>     iBase_INTERLEAVED,
>     iBase_UNDETERMINED
>   } iBase_StorageOrder;
> 
> 
> On Fri, 2008-11-14 at 06:04, txie at scorec.rpi.edu wrote:
>> Hi, Mark,
>>
>> Currently we assume that one part per process in the FMDB_iMeshP
>> implementation. And imesh_load can be used in more than one process.
>>
>> Thanks,
>>
>> Ting
>>
>>
>>> imesh_load appears to enter inf. loop if you happen to start on a number
>>> of processors less than number of parts.
>>>
>>> Mark
>>>
>>> On Thu, 2008-11-13 at 22:44, Mark Miller wrote:
>>>> Onkar,
>>>>
>>>> I am really puzzled by the data I am getting back from parallel FMDB via
>>>> iMesh interface for the mesh_cube_660_4proc test case you gave me.
>>>>
>>>> On proc 0, the call to getallvtxcoords returns 64 coordinate values
>>>> which is what I expect. However, the call to imesh_getvtxcoordindex
>>>> returns 'connectivity' index offsets that are much larger than 64.
>>>> I wonder if somehow I am getting back 'global' coordinate index values
>>>> from this method?
>>>>
>>>> Mark
>>>>
>>>> avtITAPS_FMDBFileFormat::GetMesh
>>>> Made it past call to "imesh_getentities_" at line 1244 in file
>>>> avtITAPS_FMDBFileFormat.C
>>>> entRegnHdls_size = 165
>>>> Made it past call to "imesh_getentities_" at line 1251 in file
>>>> avtITAPS_FMDBFileFormat.C
>>>> entFaceHdls_size = 379
>>>> Made it past call to "imesh_getentities_" at line 1258 in file
>>>> avtITAPS_FMDBFileFormat.C
>>>> entCurvHdls_size = 277
>>>> Made it past call to "imesh_getentities_" at line 1265 in file
>>>> avtITAPS_FMDBFileFormat.C
>>>> entVertHdls_size = 64
>>>> Made it past call to "imesh_getallvtxcoords_" at line 1274 in file
>>>> avtITAPS_FMDBFileFormat.C
>>>> 1, 1, 0
>>>> -1, -1, 0
>>>> 1, -1, -1
>>>> 1, 1, 0
>>>> 1, 1, 1
>>>> 1, -1, 1
>>>> 1, -0.333054, 0.661111
>>>> 1, 0.333892, 1
>>>> 0.338889, 1, 1
>>>> -0.333888, -1, 1.32222
>>>> 0.332224, -1, 1
>>>> 0.522005, -1, -1
>>>> 0.519968, -1, 0.667783
>>>> -0.636653, -1, 1
>>>> 0.00498673, -1, -0.333054
>>>> -1, -0.579238, 0
>>>> 0.580276, 1, 1
>>>> 0.476439, -0.476542, 0.333892
>>>> -0.554779, -0.558122, 0
>>>> 0.562053, 0.556558, 0.338889
>>>> 0.194421, -0.703906, 1
>>>> 0.753433, -0.744433, 0
>>>> 0.67532, -0.254162, -0.333888
>>>> -0.100118, -0.518252, -1
>>>> 0.536317, 0.0201365, 0
>>>> -0.525001, -0.0705034, 0.332224
>>>> 0.00463185, -0.0108681, -1
>>>> 1, -0.562141, 0
>>>> 1, 0.551738, 0.522005
>>>> 1, 0.553414, -1
>>>> 1, -0.46401, 0.48233
>>>> 1, 0.438439, 0.519968
>>>> 1, -0.00404706, -1
>>>> 1, -0.01364, 1.03979
>>>> -0.413533, -0.358763, -0.636653
>>>> 0.0333995, -0.382789, -1
>>>> -0.00137382, 0.0753535, 0.696981
>>>> -0.414604, 0.0216768, 0.00498673
>>>> -0.406887, -0.370834, -1
>>>> 0.0920263, -0.433486, 0.773063
>>>> 0, 0, -1
>>>> -0.472829, 0.0315931, -0.579238
>>>> -0.0108454, 0.00129541, 0.47684
>>>> 0.408, -0.408, 0.580276
>>>> 0.448358, 0.00914508, 1
>>>> 0.501977, -0.452777, 0.65203
>>>> 0.41117, -0.0437623, 0.476439
>>>> 0.408, -0.408, -0.476542
>>>> 0.432157, -0.0151216, 0
>>>> 0, 0.408, -0.554779
>>>> 0.387662, 0.41085, -0.558122
>>>> 0.422741, 0.350308, 0
>>>> 0.368157, 0.402968, 0.562053
>>>> 0.395943, 0.390392, 0.556558
>>>> 0.00183323, -0.709481, 0
>>>> -0.195426, -0.641512, 0.194421
>>>> 0.677074, -0.247432, -0.703906
>>>> 0.669767, 0.24477, 0.378452
>>>> 0.713723, 0.257543, 0.753433
>>>> 0.620712, 0.197067, -0.744433
>>>> 0.245164, 0.667283, 0.720594
>>>> 0.639625, 0.250531, 0.67532
>>>> 0.693725, 0.686982, -0.254162
>>>> 0.203988, -0.204012, 0.390573
>>>> Made it past call to "imesh_getvtxcoordindex_" at line 1334 in file
>>>> avtITAPS_FMDBFileFormat.C
>>>> zoneType = 10: 86, 81, 85, 84,
>>>> zoneType = 10: 86, 80, 82, 81,
>>>> zoneType = 10: 84, 81, 80, 86,
>>>> zoneType = 10: 86, 80, 84, 83,
>>>> zoneType = 10: 80, 83, 86, 82,
>>>> zoneType = 10: 90, 84, 86, 85,
>>>> zoneType = 10: 84, 87, 90, 86,
>>>> zoneType = 10: 87, 86, 84, 83,
>>>> zoneType = 10: 94, 91, 93, 85,
>>>> zoneType = 10: 85, 91, 81, 94,
>>>> zoneType = 10: 94, 81, 85, 86,
>>>> zoneType = 10: 96, 85, 94, 93,
>>>> zoneType = 10: 85, 90, 96, 94,
>>>> zoneType = 10: 90, 94, 85, 86,
>>>> zoneType = 10: 104, 92, 94, 86,
>>>> zoneType = 10: 104, 82, 103, 92,
>>>> zoneType = 10: 86, 92, 82, 104,
>>>> zoneType = 10: 82, 100, 104, 103,
>>>> zoneType = 10: 105, 94, 96, 90,
>>>> zoneType = 10: 105, 86, 104, 94,
>>>> zoneType = 10: 90, 94, 86, 105,
>>>> zoneType = 10: 122, 90, 105, 96,
>>>> zoneType = 10: 6, 30, 63, 46,
>>>> zoneType = 10: 48, 6, 63, 46,
>>>> zoneType = 10: 66, 63, 30, 80,
>>>> zoneType = 10: 66, 63, 80, 68,
>>>> zoneType = 10: 66, 70, 68, 80,
>>>> zoneType = 10: 82, 81, 80, 70,
>>>> zoneType = 10: 66, 70, 80, 81,
>>>> zoneType = 10: 30, 63, 46, 80,
>>>> zoneType = 10: 63, 48, 46, 80,
>>>> zoneType = 10: 46, 48, 84, 80,
>>>> zoneType = 10: 41, 7, 31, 62,
>>>> zoneType = 10: 41, 7, 62, 71,
>>>> zoneType = 10: 31, 62, 66, 91,
>>>> zoneType = 10: 66, 81, 31, 91,
>>>> zoneType = 10: 31, 62, 91, 41,
>>>> zoneType = 10: 82, 92, 70, 103,
>>>> zoneType = 10: 67, 62, 24, 91,
>>>> zoneType = 10: 91, 67, 92, 24,
>>>> zoneType = 10: 67, 92, 24, 78,
>>>> zoneType = 10: 7, 24, 62, 71,
>>>> zoneType = 10: 24, 62, 71, 91,
>>>> zoneType = 10: 47, 44, 41, 93,
>>>> zoneType = 10: 41, 22, 7, 71,
>>>> zoneType = 10: 85, 91, 93, 41,
>>>> zoneType = 10: 62, 41, 71, 91,
>>>> zoneType = 10: 91, 93, 41, 71,
>>>> zoneType = 10: 93, 71, 78, 75,
>>>> zoneType = 10: 41, 47, 93, 85,
>>>> zoneType = 10: 94, 93, 78, 96,
>>>> zoneType = 10: 75, 78, 96, 77,
>>>> zoneType = 10: 78, 25, 24, 67,
>>>> zoneType = 10: 67, 70, 92, 103,
>>>> zoneType = 10: 25, 64, 67, 103,
>>>> zoneType = 10: 92, 67, 103, 25,
>>>> zoneType = 10: 92, 67, 25, 78,
>>>> zoneType = 10: 25, 64, 103, 73,
>>>> zoneType = 10: 25, 4, 64, 73,
>>>> zoneType = 10: 4, 64, 73, 60,
>>>> zoneType = 10: 4, 26, 64, 60,
>>>> zoneType = 10: 64, 103, 73, 60,
>>>> zoneType = 10: 104, 73, 103, 60,
>>>> zoneType = 10: 104, 73, 60, 76,
>>>> zoneType = 10: 96, 78, 76, 77,
>>>> zoneType = 10: 20, 73, 76, 60,
>>>> zoneType = 10: 76, 20, 60, 21,
>>>> zoneType = 10: 4, 20, 60, 73,
>>>> zoneType = 10: 122, 76, 74, 77,
>>>> zoneType = 10: 60, 104, 76, 105,
>>>> zoneType = 10: 30, 126, 80, 46,
>>>> zoneType = 10: 85, 126, 84, 81,
>>>> zoneType = 10: 125, 126, 85, 81,
>>>> zoneType = 10: 66, 125, 31, 81,
>>>> zoneType = 10: 80, 126, 84, 46,
>>> --
>>> Mark C. Miller, Lawrence Livermore National Laboratory
>>> email: mailto:miller86 at llnl.gov
>>> (M/T/W) (925)-423-5901 (!!LLNL BUSINESS ONLY!!)
>>> (Th/F)  (530)-753-8511 (!!LLNL BUSINESS ONLY!!)
>>>
>>>

-- 
================================================================
"You will keep in perfect peace him whose mind is
   steadfast, because he trusts in you."               Isaiah 26:3

              Tim Tautges            Argonne National Laboratory
          (tautges at mcs.anl.gov)      (telecommuting from UW-Madison)
          phone: (608) 263-8485      1500 Engineering Dr.
            fax: (608) 263-4499      Madison, WI 53706

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