[ExM Users] Passing two dimensional numerical arrays to leaf functions

[Tim Armstrong]

Oops, one additional fix was needed:

-     proc blob_read_body { result input } {
+     proc blob_read_body { result src } {
        set val [ retrieve_decr_file $src ]
-       set input_name [ dict get $val path ]
+       set input_name [ local_file_path $val ]


On Tue, Sep 23, 2014 at 11:08 AM, Ozik, Jonathan <jozik at anl.gov> wrote:

>  Thanks Tim!
>
>
> On Sep 23, 2014, at 10:51 AM, Tim Armstrong <tim.g.armstrong at gmail.com>
> wrote:
>
>   There's a bug in one of our library functions.  Thanks for reporting.
> I've fixed it in the repository so it'll get into the next point release.
> If you want to quickly patch your version as a workaround, you can edit
> line 535 of turbine/lib/files.tcl in the Swift/T source as below, then run
> "make install" to install the fixed version of the file.
>
> -    proc blob_read_body { result input } {
> +   proc blob_read_body { result src } {
>
>  - Tim
>
> On Tue, Sep 23, 2014 at 9:47 AM, Ozik, Jonathan <jozik at anl.gov> wrote:
>
>> I’m attempting the blob example (
>> http://swift-lang.org/Swift-T/leaf.html#_complete_example_3_c_function_with_binary_data)
>> and am seeing this error:
>>
>> >> turbine test-b-simple.tcl
>>    0.000 MODE: SERVER
>>    0.000 MODE: WORKER
>>    0.000 WORKERS: 2 RANKS: 0 - 1
>>    0.000 SERVERS: 1 RANKS: 2 - 2
>>    0.000 MODE: WORKER
>>    0.001 function:swift:constants
>>    0.001 function:swift:constants
>>    0.001 enter function: main
>>    0.002 allocated u:b=<1> u:v=<2>
>>    0.002 allocated file: u:data=<3>
>>    0.002 store: <3>=path input.data
>> CAUGHT ERROR:
>> can't read "src": no such variable
>>     while executing
>> "retrieve_decr_file $src "
>>     (procedure "blob_read_body" line 2)
>>     invoked from within
>> "blob_read_body 1 {file 3 is_mapped 0}"
>> Turbine worker task error in: blob_read_body 1 {file 3 is_mapped 0}
>>     invoked from within
>> "c::worker_loop $WORK_TYPE(WORK)"
>>     (procedure "worker" line 28)
>>     invoked from within
>> "worker $rules $startup_cmd"
>>     (procedure "enter_mode_unchecked" line 5)
>>     invoked from within
>> "enter_mode_unchecked $rules $startup_cmd"
>>     (procedure "enter_mode" line 5)
>>     invoked from within
>> "enter_mode $rules $startup_cmd "
>> CALLING adlb::abort
>> ADLB_Abort(1)
>> MPI_Abort(1)
>> application called MPI_Abort(MPI_COMM_WORLD, 1) - process 0
>>
>> It appears that this is being triggered by the line:
>> printf("size(v) = %i", size(v));
>>
>> Any thoughts on what might be going on?
>>
>> I’m testing this on a Mac OS X setup.
>>
>> Jonathan
>>
>> On Sep 22, 2014, at 10:20 PM, Ozik, Jonathan <jozik at anl.gov> wrote:
>>
>> > Thank you Justin. That should work great.
>> >
>> > Jonathan
>> >
>> > On Sep 22, 2014, at 8:05 PM, Justin M Wozniak <wozniak at mcs.anl.gov>
>> wrote:
>> >
>> >> Hi
>> >>   You can do this based on the instructions for C binary data:
>> >>
>> >>
>> http://swift-lang.org/Swift-T/leaf.html#_complete_example_3_c_function_with_binary_data
>> >>
>> >> The Swift blob is a void* - you can cast to whatever you want.  You
>> can cast it to a double* that is actually a 2D array (following BLAS
>> conventions).
>> >>
>> >>   Justin
>> >>
>> >> On 9/22/2014 6:32 PM, Ozik, Jonathan wrote:
>> >>> Hello all,
>> >>>
>> >>> I’m curious about how people generally go about passing (and
>> returning) two (or n-) dimensional arrays to leaf functions. Are there
>> simple examples using SWIG and Tcl? Or are file based approaches used via
>> app fuctions?
>> >>>
>> >>> Any thoughts would be appreciated,
>> >>>
>> >>> Jonathan
>> >>>
>> >>>
>> >>>
>> >>> _______________________________________________
>> >>> ExM-user mailing list
>> >>> ExM-user at lists.mcs.anl.gov
>> >>> https://lists.mcs.anl.gov/mailman/listinfo/exm-user
>> >>
>> >> --
>> >> Justin M Wozniak
>> >>
>> >
>> > _______________________________________________
>> > ExM-user mailing list
>> > ExM-user at lists.mcs.anl.gov
>> > https://lists.mcs.anl.gov/mailman/listinfo/exm-user
>>
>> _______________________________________________
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>>
>
>
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