[Darshan-commits] Build failed in Jenkins: Radix-IO » Darshan » x86-master-profconf #486

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Sun Mar 29 19:12:15 CDT 2020


See <https://cimaster.alcf.anl.gov/jenkins/job/Radix-IO/job/Darshan/job/x86-master-profconf/486/display/redirect>

Changes:


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uthash-1.9.2/tests/test17.ans
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uthash-1.9.2/tests/threads/
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uthash-1.9.2/tests/threads/README
uthash-1.9.2/tests/threads/do_tests
uthash-1.9.2/tests/threads/test1.c
uthash-1.9.2/tests/threads/test2.c
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2   -c  ../../darshan-util/darshan-logutils.c -o darshan-logutils.o
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2   -c  ../../darshan-util/darshan-posix-logutils.c -o darshan-posix-logutils.o
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2   -c  ../../darshan-util/darshan-mpiio-logutils.c -o darshan-mpiio-logutils.o
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2   -c  ../../darshan-util/darshan-hdf5-logutils.c -o darshan-hdf5-logutils.o
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2   -c  ../../darshan-util/darshan-pnetcdf-logutils.c -o darshan-pnetcdf-logutils.o
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2   -c  ../../darshan-util/darshan-bgq-logutils.c -o darshan-bgq-logutils.o
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2   -c  ../../darshan-util/darshan-lustre-logutils.c -o darshan-lustre-logutils.o
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2   -c  ../../darshan-util/darshan-stdio-logutils.c -o darshan-stdio-logutils.o
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2   -c  ../../darshan-util/darshan-dxt-logutils.c -o darshan-dxt-logutils.o
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2   -c  ../../darshan-util/darshan-mdhim-logutils.c -o darshan-mdhim-logutils.o
ar rcs libdarshan-util.a darshan-logutils.o darshan-posix-logutils.o darshan-mpiio-logutils.o darshan-hdf5-logutils.o darshan-pnetcdf-logutils.o darshan-bgq-logutils.o darshan-lustre-logutils.o darshan-stdio-logutils.o darshan-dxt-logutils.o darshan-mdhim-logutils.o
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2   -c  ../../darshan-util/darshan-null-logutils.c -o darshan-null-logutils.o
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2    ../../darshan-util/darshan-analyzer.c libdarshan-util.a -o darshan-analyzer -lz 
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2   -c ../../darshan-util/lookup3.c -o lookup3.o
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2    ../../darshan-util/darshan-convert.c lookup3.o libdarshan-util.a -o darshan-convert -lz 
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2    ../../darshan-util/darshan-diff.c libdarshan-util.a -o darshan-diff -lz  
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2    ../../darshan-util/darshan-parser.c libdarshan-util.a -o darshan-parser -lz  
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2    ../../darshan-util/darshan-dxt-parser.c libdarshan-util.a -o darshan-dxt-parser -lz  
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2    ../../darshan-util/darshan-merge.c libdarshan-util.a -o darshan-merge -lz 
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2    ../../darshan-util/jenkins-hash-gen.c lookup3.o -o jenkins-hash-gen -lz 
install -d /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/bin
install -d /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/lib
install -d /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/include
install -m 755 darshan-analyzer /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/bin
install -m 755 darshan-convert /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/bin
install -m 755 darshan-diff /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/bin
install -m 755 darshan-parser /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/bin
install -m 755 darshan-dxt-parser /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/bin
install -m 755 darshan-merge /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/bin
install -m 755 ../../darshan-util/darshan-summary-per-file.sh /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/bin
install -m 755 ../../darshan-util/dxt_analyzer.py /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/bin
install -m 755 libdarshan-util.a /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/lib
install -m 644 ../../darshan-util/darshan-logutils.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/include
install -m 644 ../../darshan-util/darshan-posix-logutils.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/include
install -m 644 ../../darshan-util/darshan-mpiio-logutils.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/include
install -m 644 ../../darshan-util/darshan-hdf5-logutils.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/include
install -m 644 ../../darshan-util/darshan-pnetcdf-logutils.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/include
install -m 644 ../../darshan-util/darshan-bgq-logutils.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/include
install -m 644 ../../darshan-util/darshan-null-logutils.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/include
install -m 644 ../../darshan-util/darshan-lustre-logutils.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/include
install -m 644 ../../darshan-util/darshan-stdio-logutils.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/include
install -m 644 ../../darshan-util/darshan-dxt-logutils.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/include
install -m 644 ../../darshan-util/darshan-mdhim-logutils.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/include
install -m 644 ../../darshan-util/../darshan-null-log-format.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/include
install -m 644 ../../darshan-util/../darshan-posix-log-format.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/include
install -m 644 ../../darshan-util/../darshan-mpiio-log-format.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/include
install -m 644 ../../darshan-util/../darshan-hdf5-log-format.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/include
install -m 644 ../../darshan-util/../darshan-pnetcdf-log-format.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/include
install -m 644 ../../darshan-util/../darshan-bgq-log-format.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/include
install -m 644 ../../darshan-util/../darshan-lustre-log-format.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/include
install -m 644 ../../darshan-util/../darshan-stdio-log-format.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/include
install -m 644 ../../darshan-util/../darshan-dxt-log-format.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/include
install -m 644 ../../darshan-util/../darshan-mdhim-log-format.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/include
install -d /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/include/uthash-1.9.2
install -d /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/include/uthash-1.9.2/src
install -m 644 uthash-1.9.2/src/uthash.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/include/uthash-1.9.2/src/
install -m 644 ../../darshan-util/../darshan-log-format.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/include
install -m 755 darshan-job-summary/bin/darshan-job-summary.pl /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/bin
install -d /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/lib/TeX
install -m 644 ../../darshan-util/darshan-job-summary/lib/TeX/Encode.pm /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/lib/TeX/
install -d /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/lib/Number
install -d /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/lib/Number/Bytes
install -m 644 ../../darshan-util/darshan-job-summary/lib/Number/Bytes/Human.pm /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/lib/Number/Bytes
install -d /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/share
install -m 644 ../../darshan-util/darshan-job-summary/share/* /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/share
install -d /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/lib/pkgconfig
install -m 644 maint/darshan-util.pc /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/install/lib/pkgconfig/darshan-util.pc
[x86-master-profconf] $ /bin/bash /tmp/jenkins6747092936398761354.sh
Running /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/darshan-test/regression/test-cases/access-size-counter-test.sh...
Error: failed to open darshan log file /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/scratch/access-size-counter-test.darshan.
Error: failed to parse /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/scratch/access-size-counter-test.darshan
Error: failed to execute test case /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/darshan-test/regression/test-cases/access-size-counter-test.sh
Done.
Running /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/darshan-test/regression/test-cases/cxxpi.sh...
Process 0 of 4 is on cinow-01.mcp.alcf.anl.gov
Process 3 of 4 is on cinow-01.mcp.alcf.anl.gov
Process 1 of 4 is on cinow-01.mcp.alcf.anl.gov
Process 2 of 4 is on cinow-01.mcp.alcf.anl.gov
pi is approximately 3.14159 Error is 8.33331e-10
wall clock time = 0.0019896
Error: failed to open darshan log file /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/scratch/cxxpi.darshan.
Error: failed to parse /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/scratch/cxxpi.darshan
Error: failed to execute test case /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/darshan-test/regression/test-cases/cxxpi.sh
Done.
Running /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/darshan-test/regression/test-cases/fperf-f77.sh...
 Access size per process =      4194304  bytes, ntimes =            5
 Write bandwidth without file sync =    15055.358189487377       Mbytes/sec
 Read bandwidth without prior file sync =    168.95500097879921       Mbytes/sec
 Write bandwidth including file sync =    34.711497360292732       Mbytes/sec
 Read bandwidth after file sync =    14040.052709031126       Mbytes/sec
Error: failed to open darshan log file /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/scratch/fperf-f77.darshan.
Error: failed to parse /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/scratch/fperf-f77.darshan
Error: failed to execute test case /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/darshan-test/regression/test-cases/fperf-f77.sh
Done.
Running /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/darshan-test/regression/test-cases/fperf-f90.sh...
 Access size per process =      4194304  bytes, ntimes =            5
 Write bandwidth without file sync =    18596.391167458773       Mbytes/sec
 Read bandwidth without prior file sync =    331.52145565657213       Mbytes/sec
 Write bandwidth including file sync =    39.213369327021489       Mbytes/sec
 Read bandwidth after file sync =    12838.668888462689       Mbytes/sec
Error: failed to open darshan log file /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/scratch/fperf-f90.darshan.
Error: failed to parse /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/scratch/fperf-f90.darshan
Error: failed to execute test case /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/darshan-test/regression/test-cases/fperf-f90.sh
Done.
Running /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/darshan-test/regression/test-cases/fprintf-fscanf-test.sh...
# Using stdio calls.
Error: failed to open darshan log file /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/scratch/fprintf-fscanf-test.darshan.
Error: failed to parse /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/scratch/fprintf-fscanf-test.darshan
Error: failed to execute test case /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/darshan-test/regression/test-cases/fprintf-fscanf-test.sh
Done.
Running /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/darshan-test/regression/test-cases/mpi-io-test-dxt.sh...
# Using mpi-io calls.
nr_procs = 4, nr_iter = 1, blk_sz = 16777216, coll = 0
# total_size = 67108864
# Write: min_t = 0.027631, max_t = 0.031308, mean_t = 0.029469, var_t = 0.000003
# Read:  min_t = 0.147963, max_t = 0.165043, mean_t = 0.154261, var_t = 0.000056
Write bandwidth = 2143.509703 Mbytes/sec
Read bandwidth = 406.614137 Mbytes/sec
Error: failed to open darshan log file /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/scratch/mpi-io-test-dxt.darshan.
Error: failed to parse /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/scratch/mpi-io-test-dxt.darshan
Error: failed to execute test case /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/darshan-test/regression/test-cases/mpi-io-test-dxt.sh
Done.
Running /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/darshan-test/regression/test-cases/mpi-io-test.sh...
# Using mpi-io calls.
nr_procs = 4, nr_iter = 1, blk_sz = 16777216, coll = 0
# total_size = 67108864
# Write: min_t = 0.005098, max_t = 0.005792, mean_t = 0.005311, var_t = 0.000000
# Read:  min_t = 0.008024, max_t = 0.070531, mean_t = 0.028087, var_t = 0.000871
Write bandwidth = 11585.716267 Mbytes/sec
Read bandwidth = 951.481863 Mbytes/sec
Error: failed to open darshan log file /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/scratch/mpi-io-test.darshan.
Error: failed to parse /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/scratch/mpi-io-test.darshan
Error: failed to execute test case /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/darshan-test/regression/test-cases/mpi-io-test.sh
Done.
Running /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/darshan-test/regression/test-cases/stdio-test.sh...
# Using stdio calls.
Error: failed to open darshan log file /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/scratch/stdio-test.darshan.
Error: failed to parse /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/scratch/stdio-test.darshan
Error: failed to execute test case /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-profconf/darshan-test/regression/test-cases/stdio-test.sh
Done.
8 tests failed
Build step 'Execute shell' marked build as failure
Recording test results


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