[Darshan-commits] Build failed in Jenkins: Radix-IO » Darshan » x86-master-static #527
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Mon Apr 13 18:31:16 CDT 2020
See <https://cimaster.alcf.anl.gov/jenkins/job/Radix-IO/job/Darshan/job/x86-master-static/527/display/redirect>
Changes:
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[...truncated 745.75 KB...]
uthash-1.9.2/tests/test17.ans
uthash-1.9.2/tests/test17.c
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uthash-1.9.2/tests/test9.c
uthash-1.9.2/tests/threads/
uthash-1.9.2/tests/threads/Makefile
uthash-1.9.2/tests/threads/README
uthash-1.9.2/tests/threads/do_tests
uthash-1.9.2/tests/threads/test1.c
uthash-1.9.2/tests/threads/test2.c
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2 -c ../../darshan-util/darshan-logutils.c -o darshan-logutils.o
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2 -c ../../darshan-util/darshan-posix-logutils.c -o darshan-posix-logutils.o
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2 -c ../../darshan-util/darshan-mpiio-logutils.c -o darshan-mpiio-logutils.o
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2 -c ../../darshan-util/darshan-hdf5-logutils.c -o darshan-hdf5-logutils.o
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2 -c ../../darshan-util/darshan-pnetcdf-logutils.c -o darshan-pnetcdf-logutils.o
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2 -c ../../darshan-util/darshan-bgq-logutils.c -o darshan-bgq-logutils.o
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2 -c ../../darshan-util/darshan-lustre-logutils.c -o darshan-lustre-logutils.o
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2 -c ../../darshan-util/darshan-stdio-logutils.c -o darshan-stdio-logutils.o
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2 -c ../../darshan-util/darshan-dxt-logutils.c -o darshan-dxt-logutils.o
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2 -c ../../darshan-util/darshan-mdhim-logutils.c -o darshan-mdhim-logutils.o
ar rcs libdarshan-util.a darshan-logutils.o darshan-posix-logutils.o darshan-mpiio-logutils.o darshan-hdf5-logutils.o darshan-pnetcdf-logutils.o darshan-bgq-logutils.o darshan-lustre-logutils.o darshan-stdio-logutils.o darshan-dxt-logutils.o darshan-mdhim-logutils.o
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2 -c ../../darshan-util/darshan-null-logutils.c -o darshan-null-logutils.o
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2 ../../darshan-util/darshan-analyzer.c libdarshan-util.a -o darshan-analyzer -lz
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2 -c ../../darshan-util/lookup3.c -o lookup3.o
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2 ../../darshan-util/darshan-convert.c lookup3.o libdarshan-util.a -o darshan-convert -lz
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2 ../../darshan-util/darshan-diff.c libdarshan-util.a -o darshan-diff -lz
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2 ../../darshan-util/darshan-parser.c libdarshan-util.a -o darshan-parser -lz
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2 ../../darshan-util/darshan-dxt-parser.c libdarshan-util.a -o darshan-dxt-parser -lz
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2 ../../darshan-util/darshan-merge.c libdarshan-util.a -o darshan-merge -lz
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2 ../../darshan-util/jenkins-hash-gen.c lookup3.o -o jenkins-hash-gen -lz
install -d /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/bin
install -d /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/lib
install -d /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/include
install -m 755 darshan-analyzer /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/bin
install -m 755 darshan-convert /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/bin
install -m 755 darshan-diff /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/bin
install -m 755 darshan-parser /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/bin
install -m 755 darshan-dxt-parser /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/bin
install -m 755 darshan-merge /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/bin
install -m 755 ../../darshan-util/darshan-summary-per-file.sh /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/bin
install -m 755 ../../darshan-util/dxt_analyzer.py /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/bin
install -m 755 libdarshan-util.a /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/lib
install -m 644 ../../darshan-util/darshan-logutils.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/include
install -m 644 ../../darshan-util/darshan-posix-logutils.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/include
install -m 644 ../../darshan-util/darshan-mpiio-logutils.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/include
install -m 644 ../../darshan-util/darshan-hdf5-logutils.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/include
install -m 644 ../../darshan-util/darshan-pnetcdf-logutils.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/include
install -m 644 ../../darshan-util/darshan-bgq-logutils.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/include
install -m 644 ../../darshan-util/darshan-null-logutils.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/include
install -m 644 ../../darshan-util/darshan-lustre-logutils.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/include
install -m 644 ../../darshan-util/darshan-stdio-logutils.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/include
install -m 644 ../../darshan-util/darshan-dxt-logutils.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/include
install -m 644 ../../darshan-util/darshan-mdhim-logutils.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/include
install -m 644 ../../darshan-util/../darshan-null-log-format.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/include
install -m 644 ../../darshan-util/../darshan-posix-log-format.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/include
install -m 644 ../../darshan-util/../darshan-mpiio-log-format.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/include
install -m 644 ../../darshan-util/../darshan-hdf5-log-format.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/include
install -m 644 ../../darshan-util/../darshan-pnetcdf-log-format.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/include
install -m 644 ../../darshan-util/../darshan-bgq-log-format.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/include
install -m 644 ../../darshan-util/../darshan-lustre-log-format.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/include
install -m 644 ../../darshan-util/../darshan-stdio-log-format.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/include
install -m 644 ../../darshan-util/../darshan-dxt-log-format.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/include
install -m 644 ../../darshan-util/../darshan-mdhim-log-format.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/include
install -d /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/include/uthash-1.9.2
install -d /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/include/uthash-1.9.2/src
install -m 644 uthash-1.9.2/src/uthash.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/include/uthash-1.9.2/src/
install -m 644 ../../darshan-util/../darshan-log-format.h /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/include
install -m 755 darshan-job-summary/bin/darshan-job-summary.pl /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/bin
install -d /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/lib/TeX
install -m 644 ../../darshan-util/darshan-job-summary/lib/TeX/Encode.pm /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/lib/TeX/
install -d /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/lib/Number
install -d /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/lib/Number/Bytes
install -m 644 ../../darshan-util/darshan-job-summary/lib/Number/Bytes/Human.pm /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/lib/Number/Bytes
install -d /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/share
install -m 644 ../../darshan-util/darshan-job-summary/share/* /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/share
install -d /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/lib/pkgconfig
install -m 644 maint/darshan-util.pc /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/install/lib/pkgconfig/darshan-util.pc
[x86-master-static] $ /bin/bash /tmp/jenkins5539552450170021859.sh
Running /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/darshan-test/regression/test-cases/access-size-counter-test.sh...
Error: failed to open darshan log file /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/scratch/access-size-counter-test.darshan.
Error: failed to parse /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/scratch/access-size-counter-test.darshan
Error: failed to execute test case /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/darshan-test/regression/test-cases/access-size-counter-test.sh
Done.
Running /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/darshan-test/regression/test-cases/cxxpi.sh...
Process 0 of 4 is on cinow-01.mcp.alcf.anl.gov
Process 1 of 4 is on cinow-01.mcp.alcf.anl.gov
Process 2 of 4 is on cinow-01.mcp.alcf.anl.gov
Process 3 of 4 is on cinow-01.mcp.alcf.anl.gov
pi is approximately 3.14159 Error is 8.33331e-10
wall clock time = 0.000717163
Error: failed to open darshan log file /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/scratch/cxxpi.darshan.
Error: failed to parse /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/scratch/cxxpi.darshan
Error: failed to execute test case /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/darshan-test/regression/test-cases/cxxpi.sh
Done.
Running /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/darshan-test/regression/test-cases/fperf-f77.sh...
Access size per process = 4194304 bytes, ntimes = 5
Write bandwidth without file sync = 25851.853114498164 Mbytes/sec
Read bandwidth without prior file sync = 142.80965647071812 Mbytes/sec
Write bandwidth including file sync = 36.038927128912782 Mbytes/sec
Read bandwidth after file sync = 15520.234710556682 Mbytes/sec
Error: failed to open darshan log file /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/scratch/fperf-f77.darshan.
Error: failed to parse /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/scratch/fperf-f77.darshan
Error: failed to execute test case /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/darshan-test/regression/test-cases/fperf-f77.sh
Done.
Running /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/darshan-test/regression/test-cases/fperf-f90.sh...
Access size per process = 4194304 bytes, ntimes = 5
Write bandwidth without file sync = 14381.513218406704 Mbytes/sec
Read bandwidth without prior file sync = 113.17415037885792 Mbytes/sec
Write bandwidth including file sync = 37.720207326901253 Mbytes/sec
Read bandwidth after file sync = 11892.638867274633 Mbytes/sec
Error: failed to open darshan log file /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/scratch/fperf-f90.darshan.
Error: failed to parse /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/scratch/fperf-f90.darshan
Error: failed to execute test case /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/darshan-test/regression/test-cases/fperf-f90.sh
Done.
Running /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/darshan-test/regression/test-cases/fprintf-fscanf-test.sh...
# Using stdio calls.
Error: failed to open darshan log file /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/scratch/fprintf-fscanf-test.darshan.
Error: failed to parse /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/scratch/fprintf-fscanf-test.darshan
Error: failed to execute test case /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/darshan-test/regression/test-cases/fprintf-fscanf-test.sh
Done.
Running /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/darshan-test/regression/test-cases/mpi-io-test-dxt.sh...
# Using mpi-io calls.
nr_procs = 4, nr_iter = 1, blk_sz = 16777216, coll = 0
# total_size = 67108864
# Write: min_t = 0.046039, max_t = 0.046413, mean_t = 0.046223, var_t = 0.000000
# Read: min_t = 0.212618, max_t = 0.237782, mean_t = 0.223856, var_t = 0.000153
Write bandwidth = 1445.915768 Mbytes/sec
Read bandwidth = 282.228244 Mbytes/sec
Error: failed to open darshan log file /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/scratch/mpi-io-test-dxt.darshan.
Error: failed to parse /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/scratch/mpi-io-test-dxt.darshan
Error: failed to execute test case /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/darshan-test/regression/test-cases/mpi-io-test-dxt.sh
Done.
Running /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/darshan-test/regression/test-cases/mpi-io-test.sh...
# Using mpi-io calls.
nr_procs = 4, nr_iter = 1, blk_sz = 16777216, coll = 0
# total_size = 67108864
# Write: min_t = 0.005470, max_t = 0.005707, mean_t = 0.005578, var_t = 0.000000
# Read: min_t = 0.008355, max_t = 0.133603, mean_t = 0.053907, var_t = 0.003542
Write bandwidth = 11758.500155 Mbytes/sec
Read bandwidth = 502.302009 Mbytes/sec
Error: failed to open darshan log file /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/scratch/mpi-io-test.darshan.
Error: failed to parse /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/scratch/mpi-io-test.darshan
Error: failed to execute test case /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/darshan-test/regression/test-cases/mpi-io-test.sh
Done.
Running /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/darshan-test/regression/test-cases/stdio-test.sh...
# Using stdio calls.
Error: failed to open darshan log file /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/scratch/stdio-test.darshan.
Error: failed to parse /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/scratch/stdio-test.darshan
Error: failed to execute test case /gpfs/mira-home/radixio/cinow-01/workspace/Radix-IO/Darshan/x86-master-static/darshan-test/regression/test-cases/stdio-test.sh
Done.
8 tests failed
Build step 'Execute shell' marked build as failure
Recording test results
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