[Darshan-commits] Build failed in Jenkins: darshan-master-mpich-3.0.4-dynamic #694
help at cels.anl.gov
help at cels.anl.gov
Fri Apr 28 12:41:11 CDT 2017
See <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/694/display/redirect?page=changes>
Changes:
[glock] fix --with-bzlib=DIR ignoring DIR
[ssnyder] missing header needed for this test case
[ssnyder] add regression test scripts for crays at nersc
[ssnyder] make sure to unload other darshan modules
[ssnyder] get regression tests working on cori
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gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2 -I/usr/include -c ../../darshan-util/darshan-logutils.c -o darshan-logutils.o
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2 -I/usr/include -c ../../darshan-util/darshan-posix-logutils.c -o darshan-posix-logutils.o
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2 -I/usr/include -c ../../darshan-util/darshan-mpiio-logutils.c -o darshan-mpiio-logutils.o
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2 -I/usr/include -c ../../darshan-util/darshan-hdf5-logutils.c -o darshan-hdf5-logutils.o
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2 -I/usr/include -c ../../darshan-util/darshan-pnetcdf-logutils.c -o darshan-pnetcdf-logutils.o
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2 -I/usr/include -c ../../darshan-util/darshan-bgq-logutils.c -o darshan-bgq-logutils.o
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2 -I/usr/include -c ../../darshan-util/darshan-lustre-logutils.c -o darshan-lustre-logutils.o
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2 -I/usr/include -c ../../darshan-util/darshan-stdio-logutils.c -o darshan-stdio-logutils.o
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2 -I/usr/include -c ../../darshan-util/darshan-dxt-logutils.c -o darshan-dxt-logutils.o
../../darshan-util/darshan-dxt-logutils.c: In function ‘dxt_log_print_posix_file’:
../../darshan-util/darshan-dxt-logutils.c:293:5: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘int64_t’ [-Wformat=]
printf("# DXT, rank: %d, hostname: %s\n", rank, hostname);
^
../../darshan-util/darshan-dxt-logutils.c:295:17: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘int64_t’ [-Wformat=]
write_count, read_count);
^
../../darshan-util/darshan-dxt-logutils.c:295:17: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘int64_t’ [-Wformat=]
../../darshan-util/darshan-dxt-logutils.c:307:13: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘OST_ID’ [-Wformat=]
printf(" %d", (rec->ost_ids)[i]);
^
../../darshan-util/darshan-dxt-logutils.c:327:9: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘int64_t’ [-Wformat=]
printf("%8s%8d%7s%9lld%16lld%13lld%12.4f%12.4f", "X_POSIX", rank, "write", i, offset, length, start_time, end_time);
^
../../darshan-util/darshan-dxt-logutils.c:327:9: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 5 has type ‘int’ [-Wformat=]
../../darshan-util/darshan-dxt-logutils.c:327:9: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 6 has type ‘int64_t’ [-Wformat=]
../../darshan-util/darshan-dxt-logutils.c:327:9: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 7 has type ‘int64_t’ [-Wformat=]
../../darshan-util/darshan-dxt-logutils.c:335:17: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘OST_ID’ [-Wformat=]
printf(" [%3d]", (rec->ost_ids)[ost_idx]);
^
../../darshan-util/darshan-dxt-logutils.c:355:9: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘int64_t’ [-Wformat=]
printf("%8s%8d%7s%9lld%16lld%13lld%12.4f%12.4f", "X_POSIX", rank, "read", i - write_count, offset, length, start_time, end_time);
^
../../darshan-util/darshan-dxt-logutils.c:355:9: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 5 has type ‘int64_t’ [-Wformat=]
../../darshan-util/darshan-dxt-logutils.c:355:9: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 6 has type ‘int64_t’ [-Wformat=]
../../darshan-util/darshan-dxt-logutils.c:355:9: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 7 has type ‘int64_t’ [-Wformat=]
../../darshan-util/darshan-dxt-logutils.c:363:17: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘OST_ID’ [-Wformat=]
printf(" [%3d]", (rec->ost_ids)[ost_idx]);
^
../../darshan-util/darshan-dxt-logutils.c: In function ‘dxt_log_print_mpiio_file’:
../../darshan-util/darshan-dxt-logutils.c:402:5: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘int64_t’ [-Wformat=]
printf("# DXT, rank: %d, hostname: %s\n", rank, hostname);
^
../../darshan-util/darshan-dxt-logutils.c:404:17: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘int64_t’ [-Wformat=]
write_count, read_count);
^
../../darshan-util/darshan-dxt-logutils.c:404:17: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘int64_t’ [-Wformat=]
../../darshan-util/darshan-dxt-logutils.c:418:9: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘int64_t’ [-Wformat=]
printf("%8s%8d%7s%9lld%13lld%12.4f%12.4f\n", "X_MPIIO", rank, "write", i, length, start_time, end_time);
^
../../darshan-util/darshan-dxt-logutils.c:418:9: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 5 has type ‘int’ [-Wformat=]
../../darshan-util/darshan-dxt-logutils.c:418:9: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 6 has type ‘int64_t’ [-Wformat=]
../../darshan-util/darshan-dxt-logutils.c:427:9: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘int64_t’ [-Wformat=]
printf("%8s%8d%7s%9lld%13lld%12.4f%12.4f\n", "X_MPIIO", rank, "read", i - write_count, length, start_time, end_time);
^
../../darshan-util/darshan-dxt-logutils.c:427:9: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 5 has type ‘int64_t’ [-Wformat=]
../../darshan-util/darshan-dxt-logutils.c:427:9: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 6 has type ‘int64_t’ [-Wformat=]
ar rcs libdarshan-util.a darshan-logutils.o darshan-posix-logutils.o darshan-mpiio-logutils.o darshan-hdf5-logutils.o darshan-pnetcdf-logutils.o darshan-bgq-logutils.o darshan-lustre-logutils.o darshan-stdio-logutils.o darshan-dxt-logutils.o
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2 -I/usr/include -c ../../darshan-util/darshan-null-logutils.c -o darshan-null-logutils.o
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2 -I/usr/include -L/usr/lib ../../darshan-util/darshan-analyzer.c libdarshan-util.a -o darshan-analyzer -lz -lbz2
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2 -I/usr/include -c ../../darshan-util/lookup3.c -o lookup3.o
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2 -I/usr/include -L/usr/lib ../../darshan-util/darshan-convert.c lookup3.o libdarshan-util.a -o darshan-convert -lz -lbz2
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2 -I/usr/include -L/usr/lib ../../darshan-util/darshan-diff.c libdarshan-util.a -o darshan-diff -lz -lbz2
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2 -I/usr/include -L/usr/lib ../../darshan-util/darshan-parser.c libdarshan-util.a -o darshan-parser -lz -lbz2
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2 -I/usr/include -L/usr/lib ../../darshan-util/darshan-dxt-parser.c libdarshan-util.a -o darshan-dxt-parser -lz -lbz2
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2 -I/usr/include -L/usr/lib ../../darshan-util/darshan-merge.c libdarshan-util.a -o darshan-merge -lz -lbz2
gcc -I . -I .. -I ../../darshan-util -I ../../darshan-util/../ -DDARSHAN_CONFIG_H=\"darshan-util-config.h\" -g -O2 -I/usr/include -L/usr/lib ../../darshan-util/jenkins-hash-gen.c lookup3.o -o jenkins-hash-gen -lz -lbz2
install -d <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/install/bin>
install -d <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/install/lib>
install -d <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/install/include>
install -d <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/install/lib/pkgconfig>
install -m 755 darshan-analyzer <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/install/bin>
install -m 755 darshan-convert <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/install/bin>
install -m 755 darshan-diff <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/install/bin>
install -m 755 darshan-parser <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/install/bin>
install -m 755 darshan-dxt-parser <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/install/bin>
install -m 755 darshan-merge <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/install/bin>
install -m 755 ../../darshan-util/darshan-summary-per-file.sh <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/install/bin>
install -m 755 libdarshan-util.a <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/install/lib>
install -m 644 ../../darshan-util/darshan-logutils.h <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/install/include>
install -m 644 ../../darshan-util/darshan-posix-logutils.h <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/install/include>
install -m 644 ../../darshan-util/darshan-mpiio-logutils.h <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/install/include>
install -m 644 ../../darshan-util/darshan-hdf5-logutils.h <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/install/include>
install -m 644 ../../darshan-util/darshan-pnetcdf-logutils.h <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/install/include>
install -m 644 ../../darshan-util/darshan-bgq-logutils.h <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/install/include>
install -m 644 ../../darshan-util/darshan-null-logutils.h <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/install/include>
install -m 644 ../../darshan-util/darshan-lustre-logutils.h <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/install/include>
install -m 644 ../../darshan-util/darshan-stdio-logutils.h <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/install/include>
install -m 644 ../../darshan-util/darshan-dxt-logutils.h <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/install/include>
install -m 644 ../../darshan-util/../darshan-null-log-format.h <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/install/include>
install -m 644 ../../darshan-util/../darshan-posix-log-format.h <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/install/include>
install -m 644 ../../darshan-util/../darshan-mpiio-log-format.h <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/install/include>
install -m 644 ../../darshan-util/../darshan-hdf5-log-format.h <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/install/include>
install -m 644 ../../darshan-util/../darshan-pnetcdf-log-format.h <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/install/include>
install -m 644 ../../darshan-util/../darshan-bgq-log-format.h <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/install/include>
install -m 644 ../../darshan-util/../darshan-lustre-log-format.h <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/install/include>
install -m 644 ../../darshan-util/../darshan-stdio-log-format.h <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/install/include>
install -m 644 ../../darshan-util/../darshan-dxt-log-format.h <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/install/include>
install -d <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/install/include/uthash-1.9.2>
install -d <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/install/include/uthash-1.9.2/src>
install -m 644 uthash-1.9.2/src/uthash.h <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/install/include/uthash-1.9.2/src/>
install -m 644 ../../darshan-util/../darshan-log-format.h <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/install/include>
install -m 755 darshan-job-summary/bin/darshan-job-summary.pl <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/install/bin>
install -d <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/install/lib/TeX>
install -m 644 ../../darshan-util/darshan-job-summary/lib/TeX/Encode.pm <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/install/lib/TeX/>
install -d <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/install/lib/Number>
install -d <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/install/lib/Number/Bytes>
install -m 644 ../../darshan-util/darshan-job-summary/lib/Number/Bytes/Human.pm <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/install/lib/Number/Bytes>
install -d <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/install/share>
install -m 644 ../../darshan-util/darshan-job-summary/share/* <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/install/share>
install -m 644 maint/darshan-util.pc <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/install/lib/pkgconfig>
[darshan-master-mpich-3.0.4-dynamic] $ /bin/bash /tmp/hudson8392167499277993494.sh
Running <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/darshan-test/regression/test-cases/access-size-counter-test.sh...>
Done.
Running <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/darshan-test/regression/test-cases/cxxpi.sh...>
Process 3 of 4 is on grind
Process 0 of 4 is on grind
Process 2 of 4 is on grind
pi is approximately 3.14159 Error is 8.33331e-10
wall clock time = 0.00762129
Process 1 of 4 is on grind
Done.
Running <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/darshan-test/regression/test-cases/fperf-f77.sh...>
Access size per process = 4194304 bytes, ntimes = 5
Write bandwidth without file sync = 1074.5780587564175 Mbytes/sec
Read bandwidth without prior file sync = 2134.4559626809028 Mbytes/sec
Write bandwidth including file sync = 61.012586121156843 Mbytes/sec
Read bandwidth after file sync = 2387.4043826179472 Mbytes/sec
Done.
Running <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/darshan-test/regression/test-cases/fperf-f90.sh...>
Access size per process = 4194304 bytes, ntimes = 5
Write bandwidth without file sync = 1004.3065091649992 Mbytes/sec
Read bandwidth without prior file sync = 2140.3639072197584 Mbytes/sec
Write bandwidth including file sync = 58.812892913545930 Mbytes/sec
Read bandwidth after file sync = 2716.5203898109944 Mbytes/sec
Done.
Running <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/darshan-test/regression/test-cases/fprintf-fscanf-test.sh...>
# Using stdio calls.
Done.
Running <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/darshan-test/regression/test-cases/mpi-io-test-dxt.sh...>
# Using mpi-io calls.
nr_procs = 4, nr_iter = 1, blk_sz = 16777216, coll = 0
# total_size = 67108864
# Write: min_t = 0.023133, max_t = 0.084610, mean_t = 0.053829, var_t = 0.000699
# Read: min_t = 0.023562, max_t = 0.041571, mean_t = 0.033944, var_t = 0.000082
Write bandwidth = 793.155367 Mbytes/sec
Read bandwidth = 1614.332282 Mbytes/sec
Done.
Running <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/darshan-test/regression/test-cases/mpi-io-test.sh...>
# Using mpi-io calls.
nr_procs = 4, nr_iter = 1, blk_sz = 16777216, coll = 0
# total_size = 67108864
# Write: min_t = 0.011478, max_t = 0.045404, mean_t = 0.028366, var_t = 0.000213
# Read: min_t = 0.026914, max_t = 0.029654, mean_t = 0.028040, var_t = 0.000002
Write bandwidth = 1478.047736 Mbytes/sec
Read bandwidth = 2263.097195 Mbytes/sec
Done.
Running <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/darshan-test/regression/test-cases/stdio-test.sh...>
# Using stdio calls.
Error: STDIO open count of 0 is incorrect
Error: failed to execute test case <https://jenkins-ci.cels.anl.gov/job/darshan-master-mpich-3.0.4-dynamic/ws/darshan-test/regression/test-cases/stdio-test.sh>
Done.
1 tests failed
Build step 'Execute shell' marked build as failure
Recording test results
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