From zonexo at gmail.com Wed Jun 1 02:17:10 2016 From: zonexo at gmail.com (TAY wee-beng) Date: Wed, 1 Jun 2016 15:17:10 +0800 Subject: [petsc-users] Error with PETSc on K computer In-Reply-To: References: Message-ID: <377bcd7f-7872-2da6-cc5e-e13ab6c4f761@gmail.com> Hi Satish, Only partially working: [t00196 at b04-036 tutorials]$ mpiexec -n 2 ./ex4f90 jwe1050i-w The hardware barrier couldn't be used and continues processing using the software barrier. taken to (standard) corrective action, execution continuing. jwe1050i-w The hardware barrier couldn't be used and continues processing using the software barrier. taken to (standard) corrective action, execution continuing. Vec Object:Vec Object:initial vector:initial vector: 1 MPI processes type: seq 10 20 30 40 50 60 1 MPI processes type: seq 10 20 30 40 50 60 [1]PETSC ERROR: ------------------------------------------------------------------------ [1]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, probably memory access out of range [1]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger [1]PETSC ERROR: or see http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind [1]PETSC ERROR: or try http://valgrind.org on GNU/linux and Apple Mac OS X to find memory corruption errors [1]PETSC ERROR: likely location of problem given in stack below [1]PETSC ERROR: --------------------- Stack Frames ------------------------------------ [1]PETSC ERROR: Note: The EXACT line numbers in the stack are not available, [1]PETSC ERROR: INSTEAD the line number of the start of the function [1]PETSC ERROR: is given. [1]PETSC ERROR: [1] F90Array1dCreate line 50 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c [1]PETSC ERROR: --------------------- Error Message ------------------------------------------[0]PETSC ERROR: ------------------------------------------------------------------------ [0]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, probably memory access out of range [0]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger [0]PETSC ERROR: or see http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind [0]PETSC ERROR: or try http://valgrind.org on GNU/linux and Apple Mac OS X to find memory corruption errors [0]PETSC ERROR: likely location of problem given in stack below [0]PETSC ERROR: --------------------- Stack Frames ------------------------------------ [0]PETSC ERROR: Note: The EXACT line numbers in the stack are not available, [0]PETSC ERROR: INSTEAD the line number of the start of the function [0]PETSC ERROR: is given. [0]PETSC ERROR: [0] F90Array1dCreate line 50 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c [0]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [1]PETSC ERROR: Signal received [1]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [1]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015 [1]PETSC ERROR: ./ex4f90 on a petsc-3.6.3_debug named b04-036 by Unknown Wed Jun 1 13:23:41 2016 [1]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" --LD_SHARED= --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 --with-scalapack-lib=-SCALAPACK --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 --with-hypre=1 --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4 [1]PETSC ERROR: #1 User provided function() line 0 in unknown file -------------------------------------------------------------------------- [mpi::mpi-api::mpi-abort] MPI_ABORT was invoked on rank 1 in communicator MPI_COMM_WORLD with errorcode 59. NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes. You may or may not see output from other processes, depending on exactly when Open MPI kills them. -------------------------------------------------------------------------- [b04-036:28998] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_errmgr_base_error_abort+0x84) [0xffffffff11360404] [b04-036:28998] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(ompi_mpi_abort+0x51c) [0xffffffff1110391c] [b04-036:28998] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(MPI_Abort+0x6c) [0xffffffff1111b5ec] [b04-036:28998] /opt/FJSVtclang/GM-1.2.0-20/lib64/libtrtmet_c.so.1(MPI_Abort+0x2c) [0xffffffff00281bf0] [b04-036:28998] ./ex4f90 [0x292548] [b04-036:28998] ./ex4f90 [0x29165c] [b04-036:28998] /opt/FJSVxosmmm/lib64/libmpgpthread.so.1(_IO_funlockfile+0x5c) [0xffffffff121e1974] [b04-036:28998] ./ex4f90 [0x9f6748] [b04-036:28998] ./ex4f90 [0x9f0ea4] [b04-036:28998] ./ex4f90 [0x2c76a0] [b04-036:28998] ./ex4f90(MAIN__+0x38c) [0x10688c] [b04-036:28998] ./ex4f90(main+0xec) [0x268e91c] [b04-036:28998] /lib64/libc.so.6(__libc_start_main+0x194) [0xffffffff138cb81c] [b04-036:28998] ./ex4f90 [0x1063ac] [1]PETSC ERROR: ------------------------------------------------------------------------ [1]PETSC ERROR: Caught signal number 15 Terminate: Some process (or the batch system) has told this process to end [1]PETSC ERROR: Tr-------------------- [0]PETSC ERROR: Signal received [0]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [0]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015 [0]PETSC ERROR: ./ex4f90 on a petsc-3.6.3_debug named b04-036 by Unknown Wed Jun 1 13:23:41 2016 [0]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" --LD_SHARED= --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 --with-scalapack-lib=-SCALAPACK --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 --with-hypre=1 --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4 [0]PETSC ERROR: #1 User provided function() line 0 in unknown file -------------------------------------------------------------------------- [mpi::mpi-api::mpi-abort] MPI_ABORT was invoked on rank 0 in communicator MPI_COMM_WORLD with errorcode 59. NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes. You may or may not see output from other processes, depending on exactly when Open MPI kills them. -------------------------------------------------------------------------- [b04-036:28997] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_errmgr_base_error_abort+0x84) [0xffffffff11360404] [b04-036:28997] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(ompi_mpi_abort+0x51c) [0xffffffff1110391c] [b04-036:28997] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(MPI_Abort+0x6c) [0xffffffff1111b5ec] [b04-036:28997] /opt/FJSVtclang/GM-1.2.0-20/lib64/libtrtmet_c.so.1(MPI_Abort+0x2c) [0xffffffff00281bf0] [b04-036:28997] ./ex4f90 [0x292548] [b04-036:28997] ./ex4f90 [0x29165c] [b04-036:28997] /opt/FJSVxosmmm/lib64/libmpgpthread.so.1(_IO_funlockfile+0x5c) [0xffffffff121e1974] [b04-036:28997] ./ex4f90 [0x9f6748] [b04-036:28997] ./ex4f90 [0x9f0ea4] [b04-036:28997] ./ex4f90 [0x2c76a0] [b04-036:28997] ./ex4f90(MAIN__+0x38c) [0x10688c] [b04-036:28997] ./ex4f90(main+0xec) [0x268e91c] [b04-036:28997] /lib64/libc.so.6(__libc_start_main+0x194) [0xffffffff138cb81c] [b04-036:28997] ./ex4f90 [0x1063ac] [0]PETSC ERROR: ------------------------------------------------------------------------ [0]PETSC ERROR: Caught signal number 15 Terminate: Some process (or the batch system) has told this process to end [0]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger [0]PETSC ERROR: or see http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind [0]PETSC ERROR: or try http://valgrind.org on GNU/linux and Apple Mac OS X to find memory corruption errors [0]PETSC ERROR: likely location of problem given in stack below [0]PETSC ERROR: --------------------- Stack Frames ------------------------------------ [0]PETSC ERROR: Note: The EXACT line numbers in the stack are not available, [0]PETSC ERROR: INSTEAD the line number of the start of the function [0]PETSC ERROR: is given. [0]PETSC ERROR: [0] F90Array1dCreate line 50 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c [0]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [0]PETSC ERROR: Signal received [0]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [0]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015 [0]PETSC ERROR: ./ex4f90 on a petsc-3.6.3_debug named b04-036 by Unknown Wed Jun 1 13:23:41 2016 [0]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" --LD_SHARED= --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 --with-scalapack-lib=-SCALAPACK --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug --with-fortran-interfaces=1 --with-debuy option -start_in_debugger or -on_error_attach_debugger [1]PETSC ERROR: or see http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind [1]PETSC ERROR: or try http://valgrind.org on GNU/linux and Apple Mac OS X to find memory corruption errors [1]PETSC ERROR: likely location of problem given in stack below [1]PETSC ERROR: --------------------- Stack Frames ------------------------------------ [1]PETSC ERROR: Note: The EXACT line numbers in the stack are not available, [1]PETSC ERROR: INSTEAD the line number of the start of the function [1]PETSC ERROR: is given. [1]PETSC ERROR: [1] F90Array1dCreate line 50 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c [1]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [1]PETSC ERROR: Signal received [1]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [1]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015 [1]PETSC ERROR: ./ex4f90 on a petsc-3.6.3_debug named b04-036 by Unknown Wed Jun 1 13:23:41 2016 [1]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" --LD_SHARED= --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 --with-scalapack-lib=-SCALAPACK --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 --with-hypre=1 --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4 [1]PETSC ERROR: #2 User provided function() line 0 in unknown file gging=1 --useThreads=0 --with-hypre=1 --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4 [0]PETSC ERROR: #2 User provided function() line 0 in unknown file [ERR.] PLE 0019 plexec One of MPI processes was aborted.(rank=0)(nid=0x04180034)(CODE=1938,793745140674134016,15104) [t00196 at b04-036 tutorials]$ [ERR.] PLE 0021 plexec The interactive job has aborted with the signal.(sig=24) [INFO] PJM 0083 pjsub Interactive job 5211401 completed. Thank you Yours sincerely, TAY wee-beng On 1/6/2016 12:21 PM, Satish Balay wrote: > Do PETSc examples using VecGetArrayF90() work? > > say src/vec/vec/examples/tutorials/ex4f90.F > > Satish > > On Tue, 31 May 2016, TAY wee-beng wrote: > >> Hi, >> >> I'm trying to run my MPI CFD code on Japan's K computer. My code can run if I >> didn't make use of the PETSc DMDAVecGetArrayF90 subroutine. If it's called >> >> call DMDAVecGetArrayF90(da_u,u_local,u_array,ierr) >> >> I get the error below. I have no problem with my code on other clusters using >> the new Intel compilers. I used to have problems with DM when using the old >> Intel compilers. Now on the K computer, I'm using Fujitsu's Fortran compiler. >> How can I troubleshoot? >> >> Btw, I also tested on the ex13f90 example and it didn't work too. The error is >> below. >> >> >> My code error: >> >> /* size_x,size_y,size_z 76x130x136*//* >> *//* total grid size = 1343680*//* >> *//* recommended cores (50k / core) = 26.87360000000000*//* >> *//* 0*//* >> *//* 1*//* >> *//* 1*//* >> *//*[3]PETSC ERROR: [1]PETSC ERROR: >> ------------------------------------------------------------------------*//* >> *//*[1]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, >> probably memory access out of range*//* >> *//*[1]PETSC ERROR: Try option -start_in_debugger or >> -on_error_attach_debugger*//* >> *//*[1]PETSC ERROR: or see >> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* >> *//*[1]PETSC ERROR: or try http://valgrind.org on GNU/linux and Apple Mac OS X >> to find memory corruption errors*//* >> *//*[1]PETSC ERROR: likely location of problem given in stack below*//* >> *//*[1]PETSC ERROR: --------------------- Stack Frames >> ------------------------------------*//* >> *//*[1]PETSC ERROR: Note: The EXACT line numbers in the stack are not >> available,*//* >> *//*[1]PETSC ERROR: INSTEAD the line number of the start of the >> function*//* >> *//*[1]PETSC ERROR: is given.*//* >> *//*[1]PETSC ERROR: [1] F90Array3dCreate line 244 >> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* >> *//* 1*//* >> *//*------------------------------------------------------------------------*//* >> *//*[3]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, >> probably memory access out of range*//* >> *//*[3]PETSC ERROR: Try option -start_in_debugger or >> -on_error_attach_debugger*//* >> *//*[3]PETSC ERROR: or see >> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* >> *//*[3]PETSC ERROR: or try http://valgrind.org on GNU/linux and Apple Mac OS X >> to find memory corruption errors*//* >> *//*[3]PETSC ERROR: likely location of problem given in stack below*//* >> *//*[3]PETSC ERROR: --------------------- Stack Frames >> ------------------------------------*//* >> *//*[0]PETSC ERROR: >> ------------------------------------------------------------------------*//* >> *//*[0]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, >> probably memory access out of range*//* >> *//*[0]PETSC ERROR: Try option -start_in_debugger or >> -on_error_attach_debugger*//* >> *//*[0]PETSC ERROR: or see >> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* >> *//*[0]PETSC ERROR: or try http://valgrind.org on GNU/linux and Apple Mac OS X >> to find memory corruption errors*//* >> *//*[0]PETSC ERROR: likely location of problem given in stack below*//* >> *//*[0]PETSC ERROR: --------------------- Stack Frames >> ------------------------------------*//* >> *//*[0]PETSC ERROR: Note: The EXACT line numbers in the stack are not >> available,*//* >> *//*[0]PETSC ERROR: INSTEAD the line number of the start of the >> function*//* >> *//*[0]PETSC ERROR: is given.*//* >> *//*[0]PETSC ERROR: [0] F90Array3dCreate line 244 >> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* >> *//*[0]PETSC ERROR: --------------------- Error Message >> ----------------------------------------- 1*//* >> *//*[2]PETSC ERROR: >> ------------------------------------------------------------------------*//* >> *//*[2]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, >> probably memory access out of range*//* >> *//*[2]PETSC ERROR: Try option -start_in_debugger or >> -on_error_attach_debugger*//* >> *//*[2]PETSC ERROR: or see >> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* >> *//*[2]PETSC ERROR: or try http://valgrind.org on GNU/linux and Apple Mac OS X >> to find memory corruption errors*//* >> *//*[2]PETSC ERROR: likely location of problem given in stack below*//* >> *//*[2]PETSC ERROR: --------------------- Stack Frames >> ------------------------------------*//* >> *//*[2]PETSC ERROR: Note: The EXACT line numbers in the stack are not >> available,*//* >> *//*[2]PETSC ERROR: INSTEAD the line number of the start of the >> function*//* >> *//*[2]PETSC ERROR: is given.*//* >> *//*[2]PETSC ERROR: [2] F90Array3dCreate line 244 >> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* >> *//*[2]PETSC ERROR: --------------------- Error Message >> -----------------------------------------[3]PETSC ERROR: Note: The EXACT line >> numbers in the stack are not available,*//* >> *//*[3]PETSC ERROR: INSTEAD the line number of the start of the >> function*//* >> *//*[3]PETSC ERROR: is given.*//* >> *//*[3]PETSC ERROR: [3] F90Array3dCreate line 244 >> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* >> *//*[3]PETSC ERROR: --------------------- Error Message >> --------------------------------------------------------------*//* >> *//*[3]PETSC ERROR: Signal received*//* >> *//*[3]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html >> for trouble shooting.*//* >> *//*[3]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015*//* >> *//*[3]PETSC ERROR: ./a-debug.out on a petsc-3.6.3_debug named b04-036 by >> Unknown Wed Jun 1 12:54:34 2016*//* >> *//*[3]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC >> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" >> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" --LD_SHARED= >> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >> --with-shared----------------------*//* >> *//*[0]PETSC ERROR: Signal received*//* >> *//*[0]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html >> for trouble shooting.*//* >> *//*[0]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015*//* >> *//*[0]PETSC ERROR: ./a-debug.out on a petsc-3.6.3_debug named b04-036 by >> Unknown Wed Jun 1 12:54:34 2016*//* >> *//*[0]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC >> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" >> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" --LD_SHARED= >> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >> --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 >> --with-scalapack-lib=-SCALAPACK >> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >> --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 --with-hypre=1 >> --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4*//* >> *//*[0]PETSC ERROR: #1 User provided function() line 0 in unknown file*//* >> *//*--------------------------------------------------------------------------*//* >> *//*[m---------------------*//* >> *//*[2]PETSC ERROR: Signal received*//* >> *//*[2]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html >> for trouble shooting.*//* >> *//*[2]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015*//* >> *//*[2]PETSC ERROR: ./a-debug.out on a petsc-3.6.3_debug named b04-036 by >> Unknown Wed Jun 1 12:54:34 2016*//* >> *//*[2]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC >> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" >> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" --LD_SHARED= >> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >> --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 >> --with-scalapack-lib=-SCALAPACK >> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >> --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 --with-hypre=1 >> --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4*//* >> *//*[2]PETSC ERROR: #1 User provided function() line 0 in unknown file*//* >> *//*--------------------------------------------------------------------------*//* >> *//*[m[1]PETSC ERROR: --------------------- Error Message >> --------------------------------------------------------------*//* >> *//*[1]PETSC ERROR: Signal received*//* >> *//*[1]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html >> for trouble shooting.*//* >> *//*[1]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015*//* >> *//*[1]PETSC ERROR: ./a-debug.out on a petsc-3.6.3_debug named b04-036 by >> Unknown Wed Jun 1 12:54:34 2016*//* >> *//*[1]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC >> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" >> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" --LD_SHARED= >> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >> --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 >> --with-scalapack-lib=-SCALAPACK >> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >> --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 --with-hypre=1 >> --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4*//* >> *//*[1]PETSC ERROR: #1 User provided function() line 0 ilibraries=0 >> --with-blas-lapack-lib=-SSL2 --with-scalapack-lib=-SCALAPACK >> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >> --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 --with-hypre=1 >> --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4*//* >> *//*[3]PETSC ERROR: #1 User provided function() line 0 in unknown file*//* >> *//*--------------------------------------------------------------------------*//* >> *//*[mpi::mpi-api::mpi-abort]*//* >> *//*MPI_ABORT was invoked on rank 3 in communicator MPI_COMM_WORLD*//* >> *//*with errorcode 59.*//* >> *//* >> *//*NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes.*//* >> *//*You may or may not see output from other processes, depending on*//* >> *//*exactly when Open MPI kills them.*//* >> *//*--------------------------------------------------------------------------*//* >> *//*[b04-036:28416] >> /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_errmgr_base_error_abort+0x84) >> [0xffffffff11360404]*//* >> *//*[b04-036:28416] >> /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(ompi_mpi_abort+0x51c) >> [0xffffffff1110391c]*//* >> *//*[b04-036:28416] /opt/FJSVtclang/GM-1.2.0-2pi::mpi-api::mpi-abort]*//* >> *//*MPI_ABORT was invoked on rank 2 in communicator MPI_COMM_WORLD*//* >> *//*with errorcode 59.*/ >> >> ex13f90 error: >> >> >> /*[t00196 at b04-036 tutorials]$ mpiexec -np 2 ./ex13f90*//* >> *//*jwe1050i-w The hardware barrier couldn't be used and continues processing >> using the software barrier.*//* >> *//*taken to (standard) corrective action, execution continuing.*//* >> *//*jwe1050i-w The hardware barrier couldn't be used and continues processing >> using the software barrier.*//* >> *//*taken to (standard) corrective action, execution continuing.*//* >> *//* Hi! We're solving van der Pol using 2 processes.*//* >> *//* >> *//* t x1 x2*//* >> *//*[1]PETSC ERROR: >> ------------------------------------------------------------------------*//* >> *//*[1]PETSC ERROR: Caught signal number 10 BUS: Bus Error, possibly illegal >> memory access*//* >> *//*[1]PETSC ERROR: Try option -start_in_debugger or >> -on_error_attach_debugger*//* >> *//*[0]PETSC ERROR: >> ------------------------------------------------------------------------*//* >> *//*[0]PETSC ERROR: Caught signal number 10 BUS: Bus Error, possibly illegal >> memory access*//* >> *//*[0]PETSC ERROR: Try option -start_in_debugger or >> -on_error_attach_debugger*//* >> *//*[0]PETSC ERROR: or see >> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* >> *//*[0]PETSC ERROR: or try http://valgrind.org on GNU/linux and Apple Mac OS X >> to find memory corruption errors*//* >> *//*[1]PETSC ERROR: or see >> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* >> *//*[1]PETSC ERROR: or try http://valgrind.org on GNU/linux and Apple Mac OS X >> to find memory corruption errors*//* >> *//*[1]PETSC ERROR: likely location of problem given in stack below*//* >> *//*[1]PETSC ERROR: --------------------- Stack Frames >> ------------------------------------*//* >> *//*[1]PETSC ERROR: Note: The EXACT line numbers in the stack are not >> available,*//* >> *//*[1]PETSC ERROR: INSTEAD the line number of the start of the >> function*//* >> *//*[1]PETSC ERROR: is given.*//* >> *//*[1]PETSC ERROR: [1] F90Array4dCreate line 337 >> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* >> *//*[0]PETSC ERROR: likely location of problem given in stack below*//* >> *//*[0]PETSC ERROR: --------------------- Stack Frames >> ------------------------------------*//* >> *//*[0]PETSC ERROR: Note: The EXACT line numbers in the stack are not >> available,*//* >> *//*[0]PETSC ERROR: INSTEAD the line number of the start of the >> function*//* >> *//*[0]PETSC ERROR: is given.*//* >> *//*[0]PETSC ERROR: [0] F90Array4dCreate line 337 >> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* >> *//*[1]PETSC ERROR: --------------------- Error Message >> --------------------------------------------------------------*//* >> *//*[1]PETSC ERROR: Signal received*//* >> *//*[1]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html >> for trouble shooting.*//* >> *//*[1]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015*//* >> *//*[1]PETSC ERROR: ./ex13f90 on a petsc-3.6.3_debug named b04-036 by Unknown >> Wed Jun 1 13:04:34 2016*//* >> *//*[1]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC >> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" >> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" --LD_SHARED= >> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >> --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 >> --with-scalapack-lib=-SCALAPACK >> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >> --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 --with-hypre=1 >> --with-hyp*//* >> */ >> >> >> -------------- next part -------------- An HTML attachment was scrubbed... URL: From gmulas at oa-cagliari.inaf.it Wed Jun 1 05:28:32 2016 From: gmulas at oa-cagliari.inaf.it (Giacomo Mulas) Date: Wed, 1 Jun 2016 12:28:32 +0200 (CEST) Subject: [petsc-users] about the new EPSSetStoppingTestFunction functionality in SLEPC Message-ID: Hello slepc developers. I am trying to use the new EPSSetStoppingTestFunction() functionality to write my own custom MyStoppingTest() function. What information can I access within that function? I would need to get currently converged eigenpairs, can I access them, e.g. by calling EPSGetConvergedEigenpair on the eps? Also, I cannot know in advance how many eigenpairs I will need to find to fulfill my stopping criterion. What would be the most effective strategy? Calling EPSSolve many times in sequence, till I get enough eigenpairs, putting already found ones in the deflation space (which is what I did before the EPSSetStoppingTestFunction() functionality was available)? Or requesting _all_ eigenpairs and then relying on the custom stopping function to stop when enough are found? Thanks in advance Giacomo -- _________________________________________________________________ Giacomo Mulas _________________________________________________________________ INAF - Osservatorio Astronomico di Cagliari via della scienza 5 - 09047 Selargius (CA) tel. +39 070 71180244 mob. : +39 329 6603810 _________________________________________________________________ "When the storms are raging around you, stay right where you are" (Freddy Mercury) _________________________________________________________________ From jroman at dsic.upv.es Wed Jun 1 09:03:43 2016 From: jroman at dsic.upv.es (Jose E. Roman) Date: Wed, 1 Jun 2016 16:03:43 +0200 Subject: [petsc-users] about the new EPSSetStoppingTestFunction functionality in SLEPC In-Reply-To: References: Message-ID: > El 1 jun 2016, a las 12:28, Giacomo Mulas escribi?: > > Hello slepc developers. > > I am trying to use the new EPSSetStoppingTestFunction() functionality to > write my own custom MyStoppingTest() function. What information can I access > within that function? I would need to get currently converged eigenpairs, > can I access them, e.g. by calling EPSGetConvergedEigenpair on the eps? This functionality is currently very basic, not intended for doing sophisticated computations. Currently there is no public API for accessing eigenvectors during EPSSolve. Adding this would require a non-trivial effort. > > Also, I cannot know in advance how many eigenpairs I will need to find to > fulfill my stopping criterion. What would be the most effective strategy? > Calling EPSSolve many times in sequence, till I get enough eigenpairs, > putting already found ones in the deflation space (which is what I did > before the EPSSetStoppingTestFunction() functionality was available)? > Or requesting _all_ eigenpairs and then relying on the custom stopping > function to stop when enough are found? You should set ncv > number of estimated eigenvalues that satisfy your criterion. Setting nev=n (dimension of the problem) will only make you use more memory. The other alternative of calling EPSSolve several times is also ok. Jose > > Thanks in advance > Giacomo > > -- > _________________________________________________________________ > > Giacomo Mulas > _________________________________________________________________ > > INAF - Osservatorio Astronomico di Cagliari > via della scienza 5 - 09047 Selargius (CA) > > tel. +39 070 71180244 > mob. : +39 329 6603810 > _________________________________________________________________ > > "When the storms are raging around you, stay right where you are" > (Freddy Mercury) > _________________________________________________________________ From gmulas at oa-cagliari.inaf.it Wed Jun 1 10:14:44 2016 From: gmulas at oa-cagliari.inaf.it (Giacomo Mulas) Date: Wed, 1 Jun 2016 17:14:44 +0200 (CEST) Subject: [petsc-users] about the new EPSSetStoppingTestFunction functionality in SLEPC In-Reply-To: References: Message-ID: On Wed, 1 Jun 2016, Jose E. Roman wrote: > This functionality is currently very basic, not intended for doing > sophisticated computations. Currently there is no public API for > accessing eigenvectors during EPSSolve. Adding this would require a > non-trivial effort. Well, the currently converged eigenvectors (I need only the vectors, not the eigenvalues) _must_ be somewhere, in some format in the eps structure. Of course I would need to only read them without modifying anything. And actually not even all of them, only some components. Could you tell me if there is some part of the code I can read to understand where they are stored, so I can try to read them even without high-level interfaces? Alternatively, a sort of inelegant but effective way of doing this would be to 1) make a complete copy, a snapshot, of the EPS structure, store it via the private ctx variable of MyStoppingTest every time a new eigenpair is found, and have MyStoppingTest return EPS_CONVERGED_USER 2) outside EPSSolve, do the actual convergence check, using all usual fancy EPSGetConverged and EPSGetEigenvector calls, which are then available 3) if more eigenpairs are needed, restore eps from the snapshot, so EPSSolve does not have to start from scratch every time, and have it resume from where it was. To achieve this, I would need to know what I need to copy to "snapshot" an eps structure, and how to resume a partial EPSSolve calculation from where it was interrupted. Would either solution (read converged eigenvectors directly off memory from the eps structure or snapshot/resume EPSSolve) be viable without much effort on your part (except telling me where to look in the code and possibly answering some additional question if there's something I can't figure out)? thanks in advance Giacomo -- _________________________________________________________________ Giacomo Mulas _________________________________________________________________ INAF - Osservatorio Astronomico di Cagliari via della scienza 5 - 09047 Selargius (CA) tel. +39 070 71180244 mob. : +39 329 6603810 _________________________________________________________________ "When the storms are raging around you, stay right where you are" (Freddy Mercury) _________________________________________________________________ From jroman at dsic.upv.es Wed Jun 1 10:51:34 2016 From: jroman at dsic.upv.es (Jose E. Roman) Date: Wed, 1 Jun 2016 17:51:34 +0200 Subject: [petsc-users] about the new EPSSetStoppingTestFunction functionality in SLEPC In-Reply-To: References: Message-ID: <2C32C63A-5758-475C-B8F1-72E35193BC13@dsic.upv.es> On 1 Jun 2016, Giacomo Mulas wrote: > > > On Wed, 1 Jun 2016, Jose E. Roman wrote: > >> This functionality is currently very basic, not intended for doing >> sophisticated computations. Currently there is no public API for >> accessing eigenvectors during EPSSolve. Adding this would require a >> non-trivial effort. > > Well, the currently converged eigenvectors (I need only the vectors, not the > eigenvalues) _must_ be somewhere, in some format in the eps structure. Of > course I would need to only read them without modifying anything. And > actually not even all of them, only some components. Could you tell me if > there is some part of the code I can read to understand where they are > stored, so I can try to read them even without high-level interfaces? Try EPSComputeRitzVector() > > Alternatively, a sort of inelegant but effective way of doing this would be > to > 1) make a complete copy, a snapshot, of the EPS structure, store it via the > private ctx variable of MyStoppingTest every time a new eigenpair is found, and have MyStoppingTest return EPS_CONVERGED_USER > 2) outside EPSSolve, do the actual convergence check, using all usual fancy > EPSGetConverged and EPSGetEigenvector calls, which are then available 3) if more eigenpairs are needed, restore eps from the snapshot, so EPSSolve > does not have to start from scratch every time, and have it resume from > where it was. > To achieve this, I would need to know what I need to copy to "snapshot" an > eps structure, and how to resume a partial EPSSolve calculation from where > it was interrupted. SLEPc is not prepared for this kind of stuff. Sorry. > > Would either solution (read converged eigenvectors directly off memory from > the eps structure or snapshot/resume EPSSolve) be viable without much effort > on your part (except telling me where to look in the code and possibly > answering some additional question if there's something I can't figure out)? From balay at mcs.anl.gov Wed Jun 1 14:18:21 2016 From: balay at mcs.anl.gov (Satish Balay) Date: Wed, 1 Jun 2016 14:18:21 -0500 Subject: [petsc-users] Error with PETSc on K computer In-Reply-To: <377bcd7f-7872-2da6-cc5e-e13ab6c4f761@gmail.com> References: <377bcd7f-7872-2da6-cc5e-e13ab6c4f761@gmail.com> Message-ID: What does -X9 in --FFLAGS="-X9 -O0" do? can you send configure.log for this build? And does the attached patch make a difference with this example? [suggest doing a separate temporary build of PETSc - in a different source location - to check this.] Satish On Wed, 1 Jun 2016, TAY wee-beng wrote: > Hi Satish, > > Only partially working: > > [t00196 at b04-036 tutorials]$ mpiexec -n 2 ./ex4f90 > jwe1050i-w The hardware barrier couldn't be used and continues processing > using the software barrier. > taken to (standard) corrective action, execution continuing. > jwe1050i-w The hardware barrier couldn't be used and continues processing > using the software barrier. > taken to (standard) corrective action, execution continuing. > Vec Object:Vec Object:initial vector:initial vector: 1 MPI processes > type: seq > 10 > 20 > 30 > 40 > 50 > 60 > 1 MPI processes > type: seq > 10 > 20 > 30 > 40 > 50 > 60 > [1]PETSC ERROR: > ------------------------------------------------------------------------ > [1]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, probably > memory access out of range > [1]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger > [1]PETSC ERROR: or see > http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind > [1]PETSC ERROR: or try http://valgrind.org on GNU/linux and Apple Mac OS X to > find memory corruption errors > [1]PETSC ERROR: likely location of problem given in stack below > [1]PETSC ERROR: --------------------- Stack Frames > ------------------------------------ > [1]PETSC ERROR: Note: The EXACT line numbers in the stack are not available, > [1]PETSC ERROR: INSTEAD the line number of the start of the function > [1]PETSC ERROR: is given. > [1]PETSC ERROR: [1] F90Array1dCreate line 50 > /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c > [1]PETSC ERROR: --------------------- Error Message > ------------------------------------------[0]PETSC ERROR: > ------------------------------------------------------------------------ > [0]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, probably > memory access out of range > [0]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger > [0]PETSC ERROR: or see > http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind > [0]PETSC ERROR: or try http://valgrind.org on GNU/linux and Apple Mac OS X to > find memory corruption errors > [0]PETSC ERROR: likely location of problem given in stack below > [0]PETSC ERROR: --------------------- Stack Frames > ------------------------------------ > [0]PETSC ERROR: Note: The EXACT line numbers in the stack are not available, > [0]PETSC ERROR: INSTEAD the line number of the start of the function > [0]PETSC ERROR: is given. > [0]PETSC ERROR: [0] F90Array1dCreate line 50 > /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c > [0]PETSC ERROR: --------------------- Error Message > -------------------------------------------------------------- > [1]PETSC ERROR: Signal received > [1]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for > trouble shooting. > [1]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015 > [1]PETSC ERROR: ./ex4f90 on a petsc-3.6.3_debug named b04-036 by Unknown Wed > Jun 1 13:23:41 2016 > [1]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC > --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" > --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" --LD_SHARED= > --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big > --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 > --with-scalapack-lib=-SCALAPACK > --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug > --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 --with-hypre=1 > --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4 > [1]PETSC ERROR: #1 User provided function() line 0 in unknown file > -------------------------------------------------------------------------- > [mpi::mpi-api::mpi-abort] > MPI_ABORT was invoked on rank 1 in communicator MPI_COMM_WORLD > with errorcode 59. > > NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes. > You may or may not see output from other processes, depending on > exactly when Open MPI kills them. > -------------------------------------------------------------------------- > [b04-036:28998] > /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_errmgr_base_error_abort+0x84) > [0xffffffff11360404] > [b04-036:28998] > /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(ompi_mpi_abort+0x51c) > [0xffffffff1110391c] > [b04-036:28998] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(MPI_Abort+0x6c) > [0xffffffff1111b5ec] > [b04-036:28998] > /opt/FJSVtclang/GM-1.2.0-20/lib64/libtrtmet_c.so.1(MPI_Abort+0x2c) > [0xffffffff00281bf0] > [b04-036:28998] ./ex4f90 [0x292548] > [b04-036:28998] ./ex4f90 [0x29165c] > [b04-036:28998] /opt/FJSVxosmmm/lib64/libmpgpthread.so.1(_IO_funlockfile+0x5c) > [0xffffffff121e1974] > [b04-036:28998] ./ex4f90 [0x9f6748] > [b04-036:28998] ./ex4f90 [0x9f0ea4] > [b04-036:28998] ./ex4f90 [0x2c76a0] > [b04-036:28998] ./ex4f90(MAIN__+0x38c) [0x10688c] > [b04-036:28998] ./ex4f90(main+0xec) [0x268e91c] > [b04-036:28998] /lib64/libc.so.6(__libc_start_main+0x194) [0xffffffff138cb81c] > [b04-036:28998] ./ex4f90 [0x1063ac] > [1]PETSC ERROR: > ------------------------------------------------------------------------ > [1]PETSC ERROR: Caught signal number 15 Terminate: Some process (or the batch > system) has told this process to end > [1]PETSC ERROR: Tr-------------------- > [0]PETSC ERROR: Signal received > [0]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for > trouble shooting. > [0]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015 > [0]PETSC ERROR: ./ex4f90 on a petsc-3.6.3_debug named b04-036 by Unknown Wed > Jun 1 13:23:41 2016 > [0]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC > --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" > --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" --LD_SHARED= > --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big > --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 > --with-scalapack-lib=-SCALAPACK > --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug > --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 --with-hypre=1 > --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4 > [0]PETSC ERROR: #1 User provided function() line 0 in unknown file > -------------------------------------------------------------------------- > [mpi::mpi-api::mpi-abort] > MPI_ABORT was invoked on rank 0 in communicator MPI_COMM_WORLD > with errorcode 59. > > NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes. > You may or may not see output from other processes, depending on > exactly when Open MPI kills them. > -------------------------------------------------------------------------- > [b04-036:28997] > /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_errmgr_base_error_abort+0x84) > [0xffffffff11360404] > [b04-036:28997] > /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(ompi_mpi_abort+0x51c) > [0xffffffff1110391c] > [b04-036:28997] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(MPI_Abort+0x6c) > [0xffffffff1111b5ec] > [b04-036:28997] > /opt/FJSVtclang/GM-1.2.0-20/lib64/libtrtmet_c.so.1(MPI_Abort+0x2c) > [0xffffffff00281bf0] > [b04-036:28997] ./ex4f90 [0x292548] > [b04-036:28997] ./ex4f90 [0x29165c] > [b04-036:28997] /opt/FJSVxosmmm/lib64/libmpgpthread.so.1(_IO_funlockfile+0x5c) > [0xffffffff121e1974] > [b04-036:28997] ./ex4f90 [0x9f6748] > [b04-036:28997] ./ex4f90 [0x9f0ea4] > [b04-036:28997] ./ex4f90 [0x2c76a0] > [b04-036:28997] ./ex4f90(MAIN__+0x38c) [0x10688c] > [b04-036:28997] ./ex4f90(main+0xec) [0x268e91c] > [b04-036:28997] /lib64/libc.so.6(__libc_start_main+0x194) [0xffffffff138cb81c] > [b04-036:28997] ./ex4f90 [0x1063ac] > [0]PETSC ERROR: > ------------------------------------------------------------------------ > [0]PETSC ERROR: Caught signal number 15 Terminate: Some process (or the batch > system) has told this process to end > [0]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger > [0]PETSC ERROR: or see > http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind > [0]PETSC ERROR: or try http://valgrind.org on GNU/linux and Apple Mac OS X to > find memory corruption errors > [0]PETSC ERROR: likely location of problem given in stack below > [0]PETSC ERROR: --------------------- Stack Frames > ------------------------------------ > [0]PETSC ERROR: Note: The EXACT line numbers in the stack are not available, > [0]PETSC ERROR: INSTEAD the line number of the start of the function > [0]PETSC ERROR: is given. > [0]PETSC ERROR: [0] F90Array1dCreate line 50 > /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c > [0]PETSC ERROR: --------------------- Error Message > -------------------------------------------------------------- > [0]PETSC ERROR: Signal received > [0]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for > trouble shooting. > [0]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015 > [0]PETSC ERROR: ./ex4f90 on a petsc-3.6.3_debug named b04-036 by Unknown Wed > Jun 1 13:23:41 2016 > [0]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC > --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" > --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" --LD_SHARED= > --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big > --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 > --with-scalapack-lib=-SCALAPACK > --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug > --with-fortran-interfaces=1 --with-debuy option -start_in_debugger or > -on_error_attach_debugger > [1]PETSC ERROR: or see > http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind > [1]PETSC ERROR: or try http://valgrind.org on GNU/linux and Apple Mac OS X to > find memory corruption errors > [1]PETSC ERROR: likely location of problem given in stack below > [1]PETSC ERROR: --------------------- Stack Frames > ------------------------------------ > [1]PETSC ERROR: Note: The EXACT line numbers in the stack are not available, > [1]PETSC ERROR: INSTEAD the line number of the start of the function > [1]PETSC ERROR: is given. > [1]PETSC ERROR: [1] F90Array1dCreate line 50 > /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c > [1]PETSC ERROR: --------------------- Error Message > -------------------------------------------------------------- > [1]PETSC ERROR: Signal received > [1]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for > trouble shooting. > [1]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015 > [1]PETSC ERROR: ./ex4f90 on a petsc-3.6.3_debug named b04-036 by Unknown Wed > Jun 1 13:23:41 2016 > [1]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC > --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" > --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" --LD_SHARED= > --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big > --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 > --with-scalapack-lib=-SCALAPACK > --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug > --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 --with-hypre=1 > --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4 > [1]PETSC ERROR: #2 User provided function() line 0 in unknown file > gging=1 --useThreads=0 --with-hypre=1 > --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4 > [0]PETSC ERROR: #2 User provided function() line 0 in unknown file > [ERR.] PLE 0019 plexec One of MPI processes was > aborted.(rank=0)(nid=0x04180034)(CODE=1938,793745140674134016,15104) > [t00196 at b04-036 tutorials]$ > [ERR.] PLE 0021 plexec The interactive job has aborted with the > signal.(sig=24) > [INFO] PJM 0083 pjsub Interactive job 5211401 completed. > > Thank you > > Yours sincerely, > > TAY wee-beng > > On 1/6/2016 12:21 PM, Satish Balay wrote: > > Do PETSc examples using VecGetArrayF90() work? > > > > say src/vec/vec/examples/tutorials/ex4f90.F > > > > Satish > > > > On Tue, 31 May 2016, TAY wee-beng wrote: > > > > > Hi, > > > > > > I'm trying to run my MPI CFD code on Japan's K computer. My code can run > > > if I > > > didn't make use of the PETSc DMDAVecGetArrayF90 subroutine. If it's called > > > > > > call DMDAVecGetArrayF90(da_u,u_local,u_array,ierr) > > > > > > I get the error below. I have no problem with my code on other clusters > > > using > > > the new Intel compilers. I used to have problems with DM when using the > > > old > > > Intel compilers. Now on the K computer, I'm using Fujitsu's Fortran > > > compiler. > > > How can I troubleshoot? > > > > > > Btw, I also tested on the ex13f90 example and it didn't work too. The > > > error is > > > below. > > > > > > > > > My code error: > > > > > > /* size_x,size_y,size_z 76x130x136*//* > > > *//* total grid size = 1343680*//* > > > *//* recommended cores (50k / core) = 26.87360000000000*//* > > > *//* 0*//* > > > *//* 1*//* > > > *//* 1*//* > > > *//*[3]PETSC ERROR: [1]PETSC ERROR: > > > ------------------------------------------------------------------------*//* > > > *//*[1]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, > > > probably memory access out of range*//* > > > *//*[1]PETSC ERROR: Try option -start_in_debugger or > > > -on_error_attach_debugger*//* > > > *//*[1]PETSC ERROR: or see > > > http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* > > > *//*[1]PETSC ERROR: or try http://valgrind.org on GNU/linux and Apple Mac > > > OS X > > > to find memory corruption errors*//* > > > *//*[1]PETSC ERROR: likely location of problem given in stack below*//* > > > *//*[1]PETSC ERROR: --------------------- Stack Frames > > > ------------------------------------*//* > > > *//*[1]PETSC ERROR: Note: The EXACT line numbers in the stack are not > > > available,*//* > > > *//*[1]PETSC ERROR: INSTEAD the line number of the start of the > > > function*//* > > > *//*[1]PETSC ERROR: is given.*//* > > > *//*[1]PETSC ERROR: [1] F90Array3dCreate line 244 > > > /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* > > > *//* 1*//* > > > *//*------------------------------------------------------------------------*//* > > > *//*[3]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, > > > probably memory access out of range*//* > > > *//*[3]PETSC ERROR: Try option -start_in_debugger or > > > -on_error_attach_debugger*//* > > > *//*[3]PETSC ERROR: or see > > > http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* > > > *//*[3]PETSC ERROR: or try http://valgrind.org on GNU/linux and Apple Mac > > > OS X > > > to find memory corruption errors*//* > > > *//*[3]PETSC ERROR: likely location of problem given in stack below*//* > > > *//*[3]PETSC ERROR: --------------------- Stack Frames > > > ------------------------------------*//* > > > *//*[0]PETSC ERROR: > > > ------------------------------------------------------------------------*//* > > > *//*[0]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, > > > probably memory access out of range*//* > > > *//*[0]PETSC ERROR: Try option -start_in_debugger or > > > -on_error_attach_debugger*//* > > > *//*[0]PETSC ERROR: or see > > > http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* > > > *//*[0]PETSC ERROR: or try http://valgrind.org on GNU/linux and Apple Mac > > > OS X > > > to find memory corruption errors*//* > > > *//*[0]PETSC ERROR: likely location of problem given in stack below*//* > > > *//*[0]PETSC ERROR: --------------------- Stack Frames > > > ------------------------------------*//* > > > *//*[0]PETSC ERROR: Note: The EXACT line numbers in the stack are not > > > available,*//* > > > *//*[0]PETSC ERROR: INSTEAD the line number of the start of the > > > function*//* > > > *//*[0]PETSC ERROR: is given.*//* > > > *//*[0]PETSC ERROR: [0] F90Array3dCreate line 244 > > > /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* > > > *//*[0]PETSC ERROR: --------------------- Error Message > > > ----------------------------------------- 1*//* > > > *//*[2]PETSC ERROR: > > > ------------------------------------------------------------------------*//* > > > *//*[2]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, > > > probably memory access out of range*//* > > > *//*[2]PETSC ERROR: Try option -start_in_debugger or > > > -on_error_attach_debugger*//* > > > *//*[2]PETSC ERROR: or see > > > http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* > > > *//*[2]PETSC ERROR: or try http://valgrind.org on GNU/linux and Apple Mac > > > OS X > > > to find memory corruption errors*//* > > > *//*[2]PETSC ERROR: likely location of problem given in stack below*//* > > > *//*[2]PETSC ERROR: --------------------- Stack Frames > > > ------------------------------------*//* > > > *//*[2]PETSC ERROR: Note: The EXACT line numbers in the stack are not > > > available,*//* > > > *//*[2]PETSC ERROR: INSTEAD the line number of the start of the > > > function*//* > > > *//*[2]PETSC ERROR: is given.*//* > > > *//*[2]PETSC ERROR: [2] F90Array3dCreate line 244 > > > /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* > > > *//*[2]PETSC ERROR: --------------------- Error Message > > > -----------------------------------------[3]PETSC ERROR: Note: The EXACT > > > line > > > numbers in the stack are not available,*//* > > > *//*[3]PETSC ERROR: INSTEAD the line number of the start of the > > > function*//* > > > *//*[3]PETSC ERROR: is given.*//* > > > *//*[3]PETSC ERROR: [3] F90Array3dCreate line 244 > > > /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* > > > *//*[3]PETSC ERROR: --------------------- Error Message > > > --------------------------------------------------------------*//* > > > *//*[3]PETSC ERROR: Signal received*//* > > > *//*[3]PETSC ERROR: See > > > http://www.mcs.anl.gov/petsc/documentation/faq.html > > > for trouble shooting.*//* > > > *//*[3]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015*//* > > > *//*[3]PETSC ERROR: ./a-debug.out on a petsc-3.6.3_debug named b04-036 by > > > Unknown Wed Jun 1 12:54:34 2016*//* > > > *//*[3]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC > > > --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" > > > --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" > > > --LD_SHARED= > > > --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big > > > --with-shared----------------------*//* > > > *//*[0]PETSC ERROR: Signal received*//* > > > *//*[0]PETSC ERROR: See > > > http://www.mcs.anl.gov/petsc/documentation/faq.html > > > for trouble shooting.*//* > > > *//*[0]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015*//* > > > *//*[0]PETSC ERROR: ./a-debug.out on a petsc-3.6.3_debug named b04-036 by > > > Unknown Wed Jun 1 12:54:34 2016*//* > > > *//*[0]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC > > > --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" > > > --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" > > > --LD_SHARED= > > > --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big > > > --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 > > > --with-scalapack-lib=-SCALAPACK > > > --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug > > > --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 > > > --with-hypre=1 > > > --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4*//* > > > *//*[0]PETSC ERROR: #1 User provided function() line 0 in unknown > > > file*//* > > > *//*--------------------------------------------------------------------------*//* > > > *//*[m---------------------*//* > > > *//*[2]PETSC ERROR: Signal received*//* > > > *//*[2]PETSC ERROR: See > > > http://www.mcs.anl.gov/petsc/documentation/faq.html > > > for trouble shooting.*//* > > > *//*[2]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015*//* > > > *//*[2]PETSC ERROR: ./a-debug.out on a petsc-3.6.3_debug named b04-036 by > > > Unknown Wed Jun 1 12:54:34 2016*//* > > > *//*[2]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC > > > --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" > > > --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" > > > --LD_SHARED= > > > --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big > > > --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 > > > --with-scalapack-lib=-SCALAPACK > > > --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug > > > --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 > > > --with-hypre=1 > > > --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4*//* > > > *//*[2]PETSC ERROR: #1 User provided function() line 0 in unknown > > > file*//* > > > *//*--------------------------------------------------------------------------*//* > > > *//*[m[1]PETSC ERROR: --------------------- Error Message > > > --------------------------------------------------------------*//* > > > *//*[1]PETSC ERROR: Signal received*//* > > > *//*[1]PETSC ERROR: See > > > http://www.mcs.anl.gov/petsc/documentation/faq.html > > > for trouble shooting.*//* > > > *//*[1]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015*//* > > > *//*[1]PETSC ERROR: ./a-debug.out on a petsc-3.6.3_debug named b04-036 by > > > Unknown Wed Jun 1 12:54:34 2016*//* > > > *//*[1]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC > > > --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" > > > --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" > > > --LD_SHARED= > > > --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big > > > --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 > > > --with-scalapack-lib=-SCALAPACK > > > --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug > > > --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 > > > --with-hypre=1 > > > --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4*//* > > > *//*[1]PETSC ERROR: #1 User provided function() line 0 ilibraries=0 > > > --with-blas-lapack-lib=-SSL2 --with-scalapack-lib=-SCALAPACK > > > --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug > > > --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 > > > --with-hypre=1 > > > --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4*//* > > > *//*[3]PETSC ERROR: #1 User provided function() line 0 in unknown > > > file*//* > > > *//*--------------------------------------------------------------------------*//* > > > *//*[mpi::mpi-api::mpi-abort]*//* > > > *//*MPI_ABORT was invoked on rank 3 in communicator MPI_COMM_WORLD*//* > > > *//*with errorcode 59.*//* > > > *//* > > > *//*NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI > > > processes.*//* > > > *//*You may or may not see output from other processes, depending on*//* > > > *//*exactly when Open MPI kills them.*//* > > > *//*--------------------------------------------------------------------------*//* > > > *//*[b04-036:28416] > > > /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_errmgr_base_error_abort+0x84) > > > [0xffffffff11360404]*//* > > > *//*[b04-036:28416] > > > /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(ompi_mpi_abort+0x51c) > > > [0xffffffff1110391c]*//* > > > *//*[b04-036:28416] /opt/FJSVtclang/GM-1.2.0-2pi::mpi-api::mpi-abort]*//* > > > *//*MPI_ABORT was invoked on rank 2 in communicator MPI_COMM_WORLD*//* > > > *//*with errorcode 59.*/ > > > > > > ex13f90 error: > > > > > > > > > /*[t00196 at b04-036 tutorials]$ mpiexec -np 2 ./ex13f90*//* > > > *//*jwe1050i-w The hardware barrier couldn't be used and continues > > > processing > > > using the software barrier.*//* > > > *//*taken to (standard) corrective action, execution continuing.*//* > > > *//*jwe1050i-w The hardware barrier couldn't be used and continues > > > processing > > > using the software barrier.*//* > > > *//*taken to (standard) corrective action, execution continuing.*//* > > > *//* Hi! We're solving van der Pol using 2 processes.*//* > > > *//* > > > *//* t x1 x2*//* > > > *//*[1]PETSC ERROR: > > > ------------------------------------------------------------------------*//* > > > *//*[1]PETSC ERROR: Caught signal number 10 BUS: Bus Error, possibly > > > illegal > > > memory access*//* > > > *//*[1]PETSC ERROR: Try option -start_in_debugger or > > > -on_error_attach_debugger*//* > > > *//*[0]PETSC ERROR: > > > ------------------------------------------------------------------------*//* > > > *//*[0]PETSC ERROR: Caught signal number 10 BUS: Bus Error, possibly > > > illegal > > > memory access*//* > > > *//*[0]PETSC ERROR: Try option -start_in_debugger or > > > -on_error_attach_debugger*//* > > > *//*[0]PETSC ERROR: or see > > > http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* > > > *//*[0]PETSC ERROR: or try http://valgrind.org on GNU/linux and Apple Mac > > > OS X > > > to find memory corruption errors*//* > > > *//*[1]PETSC ERROR: or see > > > http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* > > > *//*[1]PETSC ERROR: or try http://valgrind.org on GNU/linux and Apple Mac > > > OS X > > > to find memory corruption errors*//* > > > *//*[1]PETSC ERROR: likely location of problem given in stack below*//* > > > *//*[1]PETSC ERROR: --------------------- Stack Frames > > > ------------------------------------*//* > > > *//*[1]PETSC ERROR: Note: The EXACT line numbers in the stack are not > > > available,*//* > > > *//*[1]PETSC ERROR: INSTEAD the line number of the start of the > > > function*//* > > > *//*[1]PETSC ERROR: is given.*//* > > > *//*[1]PETSC ERROR: [1] F90Array4dCreate line 337 > > > /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* > > > *//*[0]PETSC ERROR: likely location of problem given in stack below*//* > > > *//*[0]PETSC ERROR: --------------------- Stack Frames > > > ------------------------------------*//* > > > *//*[0]PETSC ERROR: Note: The EXACT line numbers in the stack are not > > > available,*//* > > > *//*[0]PETSC ERROR: INSTEAD the line number of the start of the > > > function*//* > > > *//*[0]PETSC ERROR: is given.*//* > > > *//*[0]PETSC ERROR: [0] F90Array4dCreate line 337 > > > /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* > > > *//*[1]PETSC ERROR: --------------------- Error Message > > > --------------------------------------------------------------*//* > > > *//*[1]PETSC ERROR: Signal received*//* > > > *//*[1]PETSC ERROR: See > > > http://www.mcs.anl.gov/petsc/documentation/faq.html > > > for trouble shooting.*//* > > > *//*[1]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015*//* > > > *//*[1]PETSC ERROR: ./ex13f90 on a petsc-3.6.3_debug named b04-036 by > > > Unknown > > > Wed Jun 1 13:04:34 2016*//* > > > *//*[1]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC > > > --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" > > > --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" > > > --LD_SHARED= > > > --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big > > > --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 > > > --with-scalapack-lib=-SCALAPACK > > > --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug > > > --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 > > > --with-hypre=1 > > > --with-hyp*//* > > > */ > > > > > > > > > > > > -------------- next part -------------- diff --git a/src/sys/f90-src/f90_cwrap.c b/src/sys/f90-src/f90_cwrap.c index 217f4e1..8f3512a 100644 --- a/src/sys/f90-src/f90_cwrap.c +++ b/src/sys/f90-src/f90_cwrap.c @@ -30,7 +30,7 @@ #define f90array1ddestroyfortranaddr_ f90array1ddestroyfortranaddr #endif -PETSC_EXTERN void PETSC_STDCALL f90array1dcreatescalar_(void *,PetscInt *,PetscInt *,F90Array1d * PETSC_F90_2PTR_PROTO_NOVAR); +PETSC_EXTERN void PETSC_STDCALL f90array1dcreatescalar_(PetscInt *,PetscInt *,void *,F90Array1d * PETSC_F90_2PTR_PROTO_NOVAR); PETSC_EXTERN void PETSC_STDCALL f90array1daccessscalar_(F90Array1d*,void** PETSC_F90_2PTR_PROTO_NOVAR); PETSC_EXTERN void PETSC_STDCALL f90array1ddestroyscalar_(F90Array1d *ptr PETSC_F90_2PTR_PROTO_NOVAR); PETSC_EXTERN void PETSC_STDCALL f90array1dcreatereal_(void *,PetscInt *,PetscInt *,F90Array1d * PETSC_F90_2PTR_PROTO_NOVAR); @@ -50,7 +50,7 @@ PetscErrorCode F90Array1dCreate(void *array,PetscDataType type,PetscInt start,Pe PetscFunctionBegin; if (type == PETSC_SCALAR) { if (!len) array = PETSC_NULL_SCALAR_Fortran; - f90array1dcreatescalar_(array,&start,&len,ptr PETSC_F90_2PTR_PARAM(ptrd)); + f90array1dcreatescalar_(&start,&len,array,ptr PETSC_F90_2PTR_PARAM(ptrd)); } else if (type == PETSC_REAL) { if (!len) array = PETSC_NULL_REAL_Fortran; f90array1dcreatereal_(array,&start,&len,ptr PETSC_F90_2PTR_PARAM(ptrd)); diff --git a/src/sys/f90-src/fsrc/f90_fwrap.F b/src/sys/f90-src/fsrc/f90_fwrap.F index 0a76982..4b4827d 100644 --- a/src/sys/f90-src/fsrc/f90_fwrap.F +++ b/src/sys/f90-src/fsrc/f90_fwrap.F @@ -1,7 +1,7 @@ !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! !XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX! !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! - subroutine F90Array1dCreateScalar(array,start,len1,ptr) + subroutine F90Array1dCreateScalar(start,len1,array,ptr) implicit none #include PetscInt start,len1 From zonexo at gmail.com Wed Jun 1 21:25:22 2016 From: zonexo at gmail.com (TAY wee-beng) Date: Thu, 2 Jun 2016 10:25:22 +0800 Subject: [petsc-users] Error with PETSc on K computer In-Reply-To: References: <377bcd7f-7872-2da6-cc5e-e13ab6c4f761@gmail.com> Message-ID: <7423eeed-4b95-28e7-c55d-08e515911935@gmail.com> Hi Satish, The X9 option is : Provides a different interpretation under Fortran 95 specifications for any parts not conforming to the language specifications of this compiler I just patched and re-compiled but it still can't work. I've attached the configure.log for both builds. FYI, some parts of the PETSc 3.6.3 code were initially patch to make it work with the K computer system: $ diff -u petsc-3.6.3/config/BuildSystem/config/package.py.org petsc-3.6.3/config/BuildSystem/config/package.py --- petsc-3.6.3/config/BuildSystem/config/package.py.org 2015-12-04 14:06:42.000000000 +0900 +++ petsc-3.6.3/config/BuildSystem/config/package.py 2016-01-22 11:09:37.000000000 +0900 @@ -174,7 +174,7 @@ return '' def getSharedFlag(self,cflags): - for flag in ['-PIC', '-fPIC', '-KPIC', '-qpic']: + for flag in ['-KPIC', '-fPIC', '-PIC', '-qpic']: if cflags.find(flag) >=0: return flag return '' $ diff -u petsc-3.6.3/config/BuildSystem/config/setCompilers.py.org petsc-3.6.3/config/BuildSystem/config/setCompilers.py --- petsc-3.6.3/config/BuildSystem/config/setCompilers.py.org 2015-07-23 00:22:46.000000000 +0900 +++ petsc-3.6.3/config/BuildSystem/config/setCompilers.py 2016-01-22 11:10:05.000000000 +0900 @@ -1017,7 +1017,7 @@ self.pushLanguage(language) #different compilers are sensitive to the order of testing these flags. So separete out GCC test. if config.setCompilers.Configure.isGNU(self.getCompiler()): testFlags = ['-fPIC'] - else: testFlags = ['-PIC', '-fPIC', '-KPIC','-qpic'] + else: testFlags = ['-KPIC', '-fPIC', '-PIC','-qpic'] for testFlag in testFlags: try: self.logPrint('Trying '+language+' compiler flag '+testFlag) $ diff -u petsc-3.6.3/config/BuildSystem/config/packages/openmp.py.org petsc-3.6.3/config/BuildSystem/config/packages/openmp.py --- petsc-3.6.3/config/BuildSystem/config/packages/openmp.py.org 2016-01-25 15:42:23.000000000+0900 +++ petsc-3.6.3/config/BuildSystem/config/packages/openmp.py 2016-01-22 17:13:52.000000000 +0900 @@ -19,7 +19,8 @@ self.found = 0 self.setCompilers.pushLanguage('C') # - for flag in ["-fopenmp", # Gnu + for flag in ["-Kopenmp", # Fujitsu + "-fopenmp", # Gnu "-qsmp=omp",# IBM XL C/C++ "-h omp", # Cray. Must come after XL because XL interprets this option as meaning"-soname omp" "-mp", # Portland Group $ diff -u ./petsc-3.6.3/config/BuildSystem/config/compilers.py.org ./petsc-3.6.3/config/BuildSystem/config/compilers.py --- ./petsc-3.6.3/config/BuildSystem/config/compilers.py.org 2015-06-10 06:24:49.000000000 +0900 +++ ./petsc-3.6.3/config/BuildSystem/config/compilers.py 2016-02-19 11:56:12.000000000 +0900 @@ -164,7 +164,7 @@ def checkCLibraries(self): '''Determines the libraries needed to link with C''' oldFlags = self.setCompilers.LDFLAGS - self.setCompilers.LDFLAGS += ' -v' + self.setCompilers.LDFLAGS += ' -###' self.pushLanguage('C') (output, returnCode) = self.outputLink('', '') self.setCompilers.LDFLAGS = oldFlags @@ -413,7 +413,7 @@ def checkCxxLibraries(self): '''Determines the libraries needed to link with C++''' oldFlags = self.setCompilers.LDFLAGS - self.setCompilers.LDFLAGS += ' -v' + self.setCompilers.LDFLAGS += ' -###' self.pushLanguage('Cxx') (output, returnCode) = self.outputLink('', '') self.setCompilers.LDFLAGS = oldFlags Thank you Yours sincerely, TAY wee-beng On 2/6/2016 3:18 AM, Satish Balay wrote: > What does -X9 in --FFLAGS="-X9 -O0" do? > > can you send configure.log for this build? > > And does the attached patch make a difference with this example? > [suggest doing a separate temporary build of PETSc - in a different source location - to check this.] > > Satish > > On Wed, 1 Jun 2016, TAY wee-beng wrote: > >> Hi Satish, >> >> Only partially working: >> >> [t00196 at b04-036 tutorials]$ mpiexec -n 2 ./ex4f90 >> jwe1050i-w The hardware barrier couldn't be used and continues processing >> using the software barrier. >> taken to (standard) corrective action, execution continuing. >> jwe1050i-w The hardware barrier couldn't be used and continues processing >> using the software barrier. >> taken to (standard) corrective action, execution continuing. >> Vec Object:Vec Object:initial vector:initial vector: 1 MPI processes >> type: seq >> 10 >> 20 >> 30 >> 40 >> 50 >> 60 >> 1 MPI processes >> type: seq >> 10 >> 20 >> 30 >> 40 >> 50 >> 60 >> [1]PETSC ERROR: >> ------------------------------------------------------------------------ >> [1]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, probably >> memory access out of range >> [1]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger >> [1]PETSC ERROR: or see >> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind >> [1]PETSC ERROR: or try http://valgrind.org on GNU/linux and Apple Mac OS X to >> find memory corruption errors >> [1]PETSC ERROR: likely location of problem given in stack below >> [1]PETSC ERROR: --------------------- Stack Frames >> ------------------------------------ >> [1]PETSC ERROR: Note: The EXACT line numbers in the stack are not available, >> [1]PETSC ERROR: INSTEAD the line number of the start of the function >> [1]PETSC ERROR: is given. >> [1]PETSC ERROR: [1] F90Array1dCreate line 50 >> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c >> [1]PETSC ERROR: --------------------- Error Message >> ------------------------------------------[0]PETSC ERROR: >> ------------------------------------------------------------------------ >> [0]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, probably >> memory access out of range >> [0]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger >> [0]PETSC ERROR: or see >> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind >> [0]PETSC ERROR: or try http://valgrind.org on GNU/linux and Apple Mac OS X to >> find memory corruption errors >> [0]PETSC ERROR: likely location of problem given in stack below >> [0]PETSC ERROR: --------------------- Stack Frames >> ------------------------------------ >> [0]PETSC ERROR: Note: The EXACT line numbers in the stack are not available, >> [0]PETSC ERROR: INSTEAD the line number of the start of the function >> [0]PETSC ERROR: is given. >> [0]PETSC ERROR: [0] F90Array1dCreate line 50 >> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c >> [0]PETSC ERROR: --------------------- Error Message >> -------------------------------------------------------------- >> [1]PETSC ERROR: Signal received >> [1]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for >> trouble shooting. >> [1]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015 >> [1]PETSC ERROR: ./ex4f90 on a petsc-3.6.3_debug named b04-036 by Unknown Wed >> Jun 1 13:23:41 2016 >> [1]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC >> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" >> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" --LD_SHARED= >> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >> --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 >> --with-scalapack-lib=-SCALAPACK >> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >> --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 --with-hypre=1 >> --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4 >> [1]PETSC ERROR: #1 User provided function() line 0 in unknown file >> -------------------------------------------------------------------------- >> [mpi::mpi-api::mpi-abort] >> MPI_ABORT was invoked on rank 1 in communicator MPI_COMM_WORLD >> with errorcode 59. >> >> NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes. >> You may or may not see output from other processes, depending on >> exactly when Open MPI kills them. >> -------------------------------------------------------------------------- >> [b04-036:28998] >> /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_errmgr_base_error_abort+0x84) >> [0xffffffff11360404] >> [b04-036:28998] >> /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(ompi_mpi_abort+0x51c) >> [0xffffffff1110391c] >> [b04-036:28998] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(MPI_Abort+0x6c) >> [0xffffffff1111b5ec] >> [b04-036:28998] >> /opt/FJSVtclang/GM-1.2.0-20/lib64/libtrtmet_c.so.1(MPI_Abort+0x2c) >> [0xffffffff00281bf0] >> [b04-036:28998] ./ex4f90 [0x292548] >> [b04-036:28998] ./ex4f90 [0x29165c] >> [b04-036:28998] /opt/FJSVxosmmm/lib64/libmpgpthread.so.1(_IO_funlockfile+0x5c) >> [0xffffffff121e1974] >> [b04-036:28998] ./ex4f90 [0x9f6748] >> [b04-036:28998] ./ex4f90 [0x9f0ea4] >> [b04-036:28998] ./ex4f90 [0x2c76a0] >> [b04-036:28998] ./ex4f90(MAIN__+0x38c) [0x10688c] >> [b04-036:28998] ./ex4f90(main+0xec) [0x268e91c] >> [b04-036:28998] /lib64/libc.so.6(__libc_start_main+0x194) [0xffffffff138cb81c] >> [b04-036:28998] ./ex4f90 [0x1063ac] >> [1]PETSC ERROR: >> ------------------------------------------------------------------------ >> [1]PETSC ERROR: Caught signal number 15 Terminate: Some process (or the batch >> system) has told this process to end >> [1]PETSC ERROR: Tr-------------------- >> [0]PETSC ERROR: Signal received >> [0]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for >> trouble shooting. >> [0]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015 >> [0]PETSC ERROR: ./ex4f90 on a petsc-3.6.3_debug named b04-036 by Unknown Wed >> Jun 1 13:23:41 2016 >> [0]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC >> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" >> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" --LD_SHARED= >> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >> --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 >> --with-scalapack-lib=-SCALAPACK >> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >> --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 --with-hypre=1 >> --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4 >> [0]PETSC ERROR: #1 User provided function() line 0 in unknown file >> -------------------------------------------------------------------------- >> [mpi::mpi-api::mpi-abort] >> MPI_ABORT was invoked on rank 0 in communicator MPI_COMM_WORLD >> with errorcode 59. >> >> NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes. >> You may or may not see output from other processes, depending on >> exactly when Open MPI kills them. >> -------------------------------------------------------------------------- >> [b04-036:28997] >> /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_errmgr_base_error_abort+0x84) >> [0xffffffff11360404] >> [b04-036:28997] >> /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(ompi_mpi_abort+0x51c) >> [0xffffffff1110391c] >> [b04-036:28997] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(MPI_Abort+0x6c) >> [0xffffffff1111b5ec] >> [b04-036:28997] >> /opt/FJSVtclang/GM-1.2.0-20/lib64/libtrtmet_c.so.1(MPI_Abort+0x2c) >> [0xffffffff00281bf0] >> [b04-036:28997] ./ex4f90 [0x292548] >> [b04-036:28997] ./ex4f90 [0x29165c] >> [b04-036:28997] /opt/FJSVxosmmm/lib64/libmpgpthread.so.1(_IO_funlockfile+0x5c) >> [0xffffffff121e1974] >> [b04-036:28997] ./ex4f90 [0x9f6748] >> [b04-036:28997] ./ex4f90 [0x9f0ea4] >> [b04-036:28997] ./ex4f90 [0x2c76a0] >> [b04-036:28997] ./ex4f90(MAIN__+0x38c) [0x10688c] >> [b04-036:28997] ./ex4f90(main+0xec) [0x268e91c] >> [b04-036:28997] /lib64/libc.so.6(__libc_start_main+0x194) [0xffffffff138cb81c] >> [b04-036:28997] ./ex4f90 [0x1063ac] >> [0]PETSC ERROR: >> ------------------------------------------------------------------------ >> [0]PETSC ERROR: Caught signal number 15 Terminate: Some process (or the batch >> system) has told this process to end >> [0]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger >> [0]PETSC ERROR: or see >> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind >> [0]PETSC ERROR: or try http://valgrind.org on GNU/linux and Apple Mac OS X to >> find memory corruption errors >> [0]PETSC ERROR: likely location of problem given in stack below >> [0]PETSC ERROR: --------------------- Stack Frames >> ------------------------------------ >> [0]PETSC ERROR: Note: The EXACT line numbers in the stack are not available, >> [0]PETSC ERROR: INSTEAD the line number of the start of the function >> [0]PETSC ERROR: is given. >> [0]PETSC ERROR: [0] F90Array1dCreate line 50 >> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c >> [0]PETSC ERROR: --------------------- Error Message >> -------------------------------------------------------------- >> [0]PETSC ERROR: Signal received >> [0]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for >> trouble shooting. >> [0]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015 >> [0]PETSC ERROR: ./ex4f90 on a petsc-3.6.3_debug named b04-036 by Unknown Wed >> Jun 1 13:23:41 2016 >> [0]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC >> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" >> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" --LD_SHARED= >> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >> --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 >> --with-scalapack-lib=-SCALAPACK >> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >> --with-fortran-interfaces=1 --with-debuy option -start_in_debugger or >> -on_error_attach_debugger >> [1]PETSC ERROR: or see >> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind >> [1]PETSC ERROR: or try http://valgrind.org on GNU/linux and Apple Mac OS X to >> find memory corruption errors >> [1]PETSC ERROR: likely location of problem given in stack below >> [1]PETSC ERROR: --------------------- Stack Frames >> ------------------------------------ >> [1]PETSC ERROR: Note: The EXACT line numbers in the stack are not available, >> [1]PETSC ERROR: INSTEAD the line number of the start of the function >> [1]PETSC ERROR: is given. >> [1]PETSC ERROR: [1] F90Array1dCreate line 50 >> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c >> [1]PETSC ERROR: --------------------- Error Message >> -------------------------------------------------------------- >> [1]PETSC ERROR: Signal received >> [1]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for >> trouble shooting. >> [1]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015 >> [1]PETSC ERROR: ./ex4f90 on a petsc-3.6.3_debug named b04-036 by Unknown Wed >> Jun 1 13:23:41 2016 >> [1]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC >> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" >> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" --LD_SHARED= >> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >> --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 >> --with-scalapack-lib=-SCALAPACK >> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >> --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 --with-hypre=1 >> --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4 >> [1]PETSC ERROR: #2 User provided function() line 0 in unknown file >> gging=1 --useThreads=0 --with-hypre=1 >> --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4 >> [0]PETSC ERROR: #2 User provided function() line 0 in unknown file >> [ERR.] PLE 0019 plexec One of MPI processes was >> aborted.(rank=0)(nid=0x04180034)(CODE=1938,793745140674134016,15104) >> [t00196 at b04-036 tutorials]$ >> [ERR.] PLE 0021 plexec The interactive job has aborted with the >> signal.(sig=24) >> [INFO] PJM 0083 pjsub Interactive job 5211401 completed. >> >> Thank you >> >> Yours sincerely, >> >> TAY wee-beng >> >> On 1/6/2016 12:21 PM, Satish Balay wrote: >>> Do PETSc examples using VecGetArrayF90() work? >>> >>> say src/vec/vec/examples/tutorials/ex4f90.F >>> >>> Satish >>> >>> On Tue, 31 May 2016, TAY wee-beng wrote: >>> >>>> Hi, >>>> >>>> I'm trying to run my MPI CFD code on Japan's K computer. My code can run >>>> if I >>>> didn't make use of the PETSc DMDAVecGetArrayF90 subroutine. If it's called >>>> >>>> call DMDAVecGetArrayF90(da_u,u_local,u_array,ierr) >>>> >>>> I get the error below. I have no problem with my code on other clusters >>>> using >>>> the new Intel compilers. I used to have problems with DM when using the >>>> old >>>> Intel compilers. Now on the K computer, I'm using Fujitsu's Fortran >>>> compiler. >>>> How can I troubleshoot? >>>> >>>> Btw, I also tested on the ex13f90 example and it didn't work too. The >>>> error is >>>> below. >>>> >>>> >>>> My code error: >>>> >>>> /* size_x,size_y,size_z 76x130x136*//* >>>> *//* total grid size = 1343680*//* >>>> *//* recommended cores (50k / core) = 26.87360000000000*//* >>>> *//* 0*//* >>>> *//* 1*//* >>>> *//* 1*//* >>>> *//*[3]PETSC ERROR: [1]PETSC ERROR: >>>> ------------------------------------------------------------------------*//* >>>> *//*[1]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, >>>> probably memory access out of range*//* >>>> *//*[1]PETSC ERROR: Try option -start_in_debugger or >>>> -on_error_attach_debugger*//* >>>> *//*[1]PETSC ERROR: or see >>>> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* >>>> *//*[1]PETSC ERROR: or try http://valgrind.org on GNU/linux and Apple Mac >>>> OS X >>>> to find memory corruption errors*//* >>>> *//*[1]PETSC ERROR: likely location of problem given in stack below*//* >>>> *//*[1]PETSC ERROR: --------------------- Stack Frames >>>> ------------------------------------*//* >>>> *//*[1]PETSC ERROR: Note: The EXACT line numbers in the stack are not >>>> available,*//* >>>> *//*[1]PETSC ERROR: INSTEAD the line number of the start of the >>>> function*//* >>>> *//*[1]PETSC ERROR: is given.*//* >>>> *//*[1]PETSC ERROR: [1] F90Array3dCreate line 244 >>>> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* >>>> *//* 1*//* >>>> *//*------------------------------------------------------------------------*//* >>>> *//*[3]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, >>>> probably memory access out of range*//* >>>> *//*[3]PETSC ERROR: Try option -start_in_debugger or >>>> -on_error_attach_debugger*//* >>>> *//*[3]PETSC ERROR: or see >>>> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* >>>> *//*[3]PETSC ERROR: or try http://valgrind.org on GNU/linux and Apple Mac >>>> OS X >>>> to find memory corruption errors*//* >>>> *//*[3]PETSC ERROR: likely location of problem given in stack below*//* >>>> *//*[3]PETSC ERROR: --------------------- Stack Frames >>>> ------------------------------------*//* >>>> *//*[0]PETSC ERROR: >>>> ------------------------------------------------------------------------*//* >>>> *//*[0]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, >>>> probably memory access out of range*//* >>>> *//*[0]PETSC ERROR: Try option -start_in_debugger or >>>> -on_error_attach_debugger*//* >>>> *//*[0]PETSC ERROR: or see >>>> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* >>>> *//*[0]PETSC ERROR: or try http://valgrind.org on GNU/linux and Apple Mac >>>> OS X >>>> to find memory corruption errors*//* >>>> *//*[0]PETSC ERROR: likely location of problem given in stack below*//* >>>> *//*[0]PETSC ERROR: --------------------- Stack Frames >>>> ------------------------------------*//* >>>> *//*[0]PETSC ERROR: Note: The EXACT line numbers in the stack are not >>>> available,*//* >>>> *//*[0]PETSC ERROR: INSTEAD the line number of the start of the >>>> function*//* >>>> *//*[0]PETSC ERROR: is given.*//* >>>> *//*[0]PETSC ERROR: [0] F90Array3dCreate line 244 >>>> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* >>>> *//*[0]PETSC ERROR: --------------------- Error Message >>>> ----------------------------------------- 1*//* >>>> *//*[2]PETSC ERROR: >>>> ------------------------------------------------------------------------*//* >>>> *//*[2]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, >>>> probably memory access out of range*//* >>>> *//*[2]PETSC ERROR: Try option -start_in_debugger or >>>> -on_error_attach_debugger*//* >>>> *//*[2]PETSC ERROR: or see >>>> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* >>>> *//*[2]PETSC ERROR: or try http://valgrind.org on GNU/linux and Apple Mac >>>> OS X >>>> to find memory corruption errors*//* >>>> *//*[2]PETSC ERROR: likely location of problem given in stack below*//* >>>> *//*[2]PETSC ERROR: --------------------- Stack Frames >>>> ------------------------------------*//* >>>> *//*[2]PETSC ERROR: Note: The EXACT line numbers in the stack are not >>>> available,*//* >>>> *//*[2]PETSC ERROR: INSTEAD the line number of the start of the >>>> function*//* >>>> *//*[2]PETSC ERROR: is given.*//* >>>> *//*[2]PETSC ERROR: [2] F90Array3dCreate line 244 >>>> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* >>>> *//*[2]PETSC ERROR: --------------------- Error Message >>>> -----------------------------------------[3]PETSC ERROR: Note: The EXACT >>>> line >>>> numbers in the stack are not available,*//* >>>> *//*[3]PETSC ERROR: INSTEAD the line number of the start of the >>>> function*//* >>>> *//*[3]PETSC ERROR: is given.*//* >>>> *//*[3]PETSC ERROR: [3] F90Array3dCreate line 244 >>>> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* >>>> *//*[3]PETSC ERROR: --------------------- Error Message >>>> --------------------------------------------------------------*//* >>>> *//*[3]PETSC ERROR: Signal received*//* >>>> *//*[3]PETSC ERROR: See >>>> http://www.mcs.anl.gov/petsc/documentation/faq.html >>>> for trouble shooting.*//* >>>> *//*[3]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015*//* >>>> *//*[3]PETSC ERROR: ./a-debug.out on a petsc-3.6.3_debug named b04-036 by >>>> Unknown Wed Jun 1 12:54:34 2016*//* >>>> *//*[3]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC >>>> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" >>>> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" >>>> --LD_SHARED= >>>> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >>>> --with-shared----------------------*//* >>>> *//*[0]PETSC ERROR: Signal received*//* >>>> *//*[0]PETSC ERROR: See >>>> http://www.mcs.anl.gov/petsc/documentation/faq.html >>>> for trouble shooting.*//* >>>> *//*[0]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015*//* >>>> *//*[0]PETSC ERROR: ./a-debug.out on a petsc-3.6.3_debug named b04-036 by >>>> Unknown Wed Jun 1 12:54:34 2016*//* >>>> *//*[0]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC >>>> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" >>>> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" >>>> --LD_SHARED= >>>> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >>>> --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 >>>> --with-scalapack-lib=-SCALAPACK >>>> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >>>> --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 >>>> --with-hypre=1 >>>> --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4*//* >>>> *//*[0]PETSC ERROR: #1 User provided function() line 0 in unknown >>>> file*//* >>>> *//*--------------------------------------------------------------------------*//* >>>> *//*[m---------------------*//* >>>> *//*[2]PETSC ERROR: Signal received*//* >>>> *//*[2]PETSC ERROR: See >>>> http://www.mcs.anl.gov/petsc/documentation/faq.html >>>> for trouble shooting.*//* >>>> *//*[2]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015*//* >>>> *//*[2]PETSC ERROR: ./a-debug.out on a petsc-3.6.3_debug named b04-036 by >>>> Unknown Wed Jun 1 12:54:34 2016*//* >>>> *//*[2]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC >>>> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" >>>> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" >>>> --LD_SHARED= >>>> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >>>> --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 >>>> --with-scalapack-lib=-SCALAPACK >>>> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >>>> --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 >>>> --with-hypre=1 >>>> --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4*//* >>>> *//*[2]PETSC ERROR: #1 User provided function() line 0 in unknown >>>> file*//* >>>> *//*--------------------------------------------------------------------------*//* >>>> *//*[m[1]PETSC ERROR: --------------------- Error Message >>>> --------------------------------------------------------------*//* >>>> *//*[1]PETSC ERROR: Signal received*//* >>>> *//*[1]PETSC ERROR: See >>>> http://www.mcs.anl.gov/petsc/documentation/faq.html >>>> for trouble shooting.*//* >>>> *//*[1]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015*//* >>>> *//*[1]PETSC ERROR: ./a-debug.out on a petsc-3.6.3_debug named b04-036 by >>>> Unknown Wed Jun 1 12:54:34 2016*//* >>>> *//*[1]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC >>>> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" >>>> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" >>>> --LD_SHARED= >>>> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >>>> --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 >>>> --with-scalapack-lib=-SCALAPACK >>>> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >>>> --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 >>>> --with-hypre=1 >>>> --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4*//* >>>> *//*[1]PETSC ERROR: #1 User provided function() line 0 ilibraries=0 >>>> --with-blas-lapack-lib=-SSL2 --with-scalapack-lib=-SCALAPACK >>>> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >>>> --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 >>>> --with-hypre=1 >>>> --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4*//* >>>> *//*[3]PETSC ERROR: #1 User provided function() line 0 in unknown >>>> file*//* >>>> *//*--------------------------------------------------------------------------*//* >>>> *//*[mpi::mpi-api::mpi-abort]*//* >>>> *//*MPI_ABORT was invoked on rank 3 in communicator MPI_COMM_WORLD*//* >>>> *//*with errorcode 59.*//* >>>> *//* >>>> *//*NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI >>>> processes.*//* >>>> *//*You may or may not see output from other processes, depending on*//* >>>> *//*exactly when Open MPI kills them.*//* >>>> *//*--------------------------------------------------------------------------*//* >>>> *//*[b04-036:28416] >>>> /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_errmgr_base_error_abort+0x84) >>>> [0xffffffff11360404]*//* >>>> *//*[b04-036:28416] >>>> /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(ompi_mpi_abort+0x51c) >>>> [0xffffffff1110391c]*//* >>>> *//*[b04-036:28416] /opt/FJSVtclang/GM-1.2.0-2pi::mpi-api::mpi-abort]*//* >>>> *//*MPI_ABORT was invoked on rank 2 in communicator MPI_COMM_WORLD*//* >>>> *//*with errorcode 59.*/ >>>> >>>> ex13f90 error: >>>> >>>> >>>> /*[t00196 at b04-036 tutorials]$ mpiexec -np 2 ./ex13f90*//* >>>> *//*jwe1050i-w The hardware barrier couldn't be used and continues >>>> processing >>>> using the software barrier.*//* >>>> *//*taken to (standard) corrective action, execution continuing.*//* >>>> *//*jwe1050i-w The hardware barrier couldn't be used and continues >>>> processing >>>> using the software barrier.*//* >>>> *//*taken to (standard) corrective action, execution continuing.*//* >>>> *//* Hi! We're solving van der Pol using 2 processes.*//* >>>> *//* >>>> *//* t x1 x2*//* >>>> *//*[1]PETSC ERROR: >>>> ------------------------------------------------------------------------*//* >>>> *//*[1]PETSC ERROR: Caught signal number 10 BUS: Bus Error, possibly >>>> illegal >>>> memory access*//* >>>> *//*[1]PETSC ERROR: Try option -start_in_debugger or >>>> -on_error_attach_debugger*//* >>>> *//*[0]PETSC ERROR: >>>> ------------------------------------------------------------------------*//* >>>> *//*[0]PETSC ERROR: Caught signal number 10 BUS: Bus Error, possibly >>>> illegal >>>> memory access*//* >>>> *//*[0]PETSC ERROR: Try option -start_in_debugger or >>>> -on_error_attach_debugger*//* >>>> *//*[0]PETSC ERROR: or see >>>> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* >>>> *//*[0]PETSC ERROR: or try http://valgrind.org on GNU/linux and Apple Mac >>>> OS X >>>> to find memory corruption errors*//* >>>> *//*[1]PETSC ERROR: or see >>>> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* >>>> *//*[1]PETSC ERROR: or try http://valgrind.org on GNU/linux and Apple Mac >>>> OS X >>>> to find memory corruption errors*//* >>>> *//*[1]PETSC ERROR: likely location of problem given in stack below*//* >>>> *//*[1]PETSC ERROR: --------------------- Stack Frames >>>> ------------------------------------*//* >>>> *//*[1]PETSC ERROR: Note: The EXACT line numbers in the stack are not >>>> available,*//* >>>> *//*[1]PETSC ERROR: INSTEAD the line number of the start of the >>>> function*//* >>>> *//*[1]PETSC ERROR: is given.*//* >>>> *//*[1]PETSC ERROR: [1] F90Array4dCreate line 337 >>>> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* >>>> *//*[0]PETSC ERROR: likely location of problem given in stack below*//* >>>> *//*[0]PETSC ERROR: --------------------- Stack Frames >>>> ------------------------------------*//* >>>> *//*[0]PETSC ERROR: Note: The EXACT line numbers in the stack are not >>>> available,*//* >>>> *//*[0]PETSC ERROR: INSTEAD the line number of the start of the >>>> function*//* >>>> *//*[0]PETSC ERROR: is given.*//* >>>> *//*[0]PETSC ERROR: [0] F90Array4dCreate line 337 >>>> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* >>>> *//*[1]PETSC ERROR: --------------------- Error Message >>>> --------------------------------------------------------------*//* >>>> *//*[1]PETSC ERROR: Signal received*//* >>>> *//*[1]PETSC ERROR: See >>>> http://www.mcs.anl.gov/petsc/documentation/faq.html >>>> for trouble shooting.*//* >>>> *//*[1]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015*//* >>>> *//*[1]PETSC ERROR: ./ex13f90 on a petsc-3.6.3_debug named b04-036 by >>>> Unknown >>>> Wed Jun 1 13:04:34 2016*//* >>>> *//*[1]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC >>>> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" >>>> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" >>>> --LD_SHARED= >>>> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >>>> --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 >>>> --with-scalapack-lib=-SCALAPACK >>>> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >>>> --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 >>>> --with-hypre=1 >>>> --with-hyp*//* >>>> */ >>>> >>>> >>>> >> >> -------------- next part -------------- An HTML attachment was scrubbed... URL: -------------- next part -------------- Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC ================================================================================ ================================================================================ Starting Configure Run at Thu Jun 2 10:39:34 2016 Configure Options: --configModules=PETSc.Configure --optionsModule=config.compilerOptions --with-cc=mpifcc --with-cxx=mpiFCC --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" --LD_SHARED= --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 --with-scalapack-lib=-SCALAPACK --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_patch_debug --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 --with-hypre=1 --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4 Working directory: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 Machine platform: ('Linux', 'd01-037', '2.6.25.8', '#1 SMP Wed Jan 6 11:32:25 JST 2016', 's64fx', 's64fx') Python version: 2.6.2 (r262:71600, Dec 20 2011, 15:18:11) [GCC 4.2.4] ================================================================================ Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC ================================================================================ TEST configureExternalPackagesDir from config.framework(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/framework.py:832) TESTING: configureExternalPackagesDir from config.framework(config/BuildSystem/config/framework.py:832) ================================================================================ TEST configureDebuggers from config.utilities.debuggers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/debuggers.py:22) TESTING: configureDebuggers from config.utilities.debuggers(config/BuildSystem/config/utilities/debuggers.py:22) Find a default debugger and determine its arguments Checking for program /opt/FJSVtclang/check/gdb...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/gdb...not found Checking for program /opt/kusu/bin/gdb...not found Checking for program /opt/kusu/sbin/gdb...not found Checking for program /usr/pgsql-9.0/bin/gdb...not found Checking for program /usr/local/bin/gdb...not found Checking for program /bin/gdb...not found Checking for program /usr/bin/gdb...not found Checking for program /home/hp150306/t00196/bin/gdb...not found Checking for program /home/hp150306/t00196/shortcut/gdb...not found Checking for program /opt/FJSVxosmmm/sbin/gdb...not found Checking for program /home/hp150306/t00196/gdb...not found Checking for program /opt/FJSVtclang/check/dbx...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/dbx...not found Checking for program /opt/kusu/bin/dbx...not found Checking for program /opt/kusu/sbin/dbx...not found Checking for program /usr/pgsql-9.0/bin/dbx...not found Checking for program /usr/local/bin/dbx...not found Checking for program /bin/dbx...not found Checking for program /usr/bin/dbx...not found Checking for program /home/hp150306/t00196/bin/dbx...not found Checking for program /home/hp150306/t00196/shortcut/dbx...not found Checking for program /opt/FJSVxosmmm/sbin/dbx...not found Checking for program /home/hp150306/t00196/dbx...not found Checking for program /opt/FJSVtclang/check/xdb...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/xdb...not found Checking for program /opt/kusu/bin/xdb...not found Checking for program /opt/kusu/sbin/xdb...not found Checking for program /usr/pgsql-9.0/bin/xdb...not found Checking for program /usr/local/bin/xdb...not found Checking for program /bin/xdb...not found Checking for program /usr/bin/xdb...not found Checking for program /home/hp150306/t00196/bin/xdb...not found Checking for program /home/hp150306/t00196/shortcut/xdb...not found Checking for program /opt/FJSVxosmmm/sbin/xdb...not found Checking for program /home/hp150306/t00196/xdb...not found Checking for program /opt/FJSVtclang/check/dsymutil...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/dsymutil...not found Checking for program /opt/kusu/bin/dsymutil...not found Checking for program /opt/kusu/sbin/dsymutil...not found Checking for program /usr/pgsql-9.0/bin/dsymutil...not found Checking for program /usr/local/bin/dsymutil...not found Checking for program /bin/dsymutil...not found Checking for program /usr/bin/dsymutil...not found Checking for program /home/hp150306/t00196/bin/dsymutil...not found Checking for program /home/hp150306/t00196/shortcut/dsymutil...not found Checking for program /opt/FJSVxosmmm/sbin/dsymutil...not found Checking for program /home/hp150306/t00196/dsymutil...not found Defined make macro "DSYMUTIL" to "true" ================================================================================ TEST configureGit from config.sourceControl(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/sourceControl.py:24) TESTING: configureGit from config.sourceControl(config/BuildSystem/config/sourceControl.py:24) Find the Git executable Checking for program /opt/FJSVtclang/check/git...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/git...not found Checking for program /opt/kusu/bin/git...not found Checking for program /opt/kusu/sbin/git...not found Checking for program /usr/pgsql-9.0/bin/git...not found Checking for program /usr/local/bin/git...not found Checking for program /bin/git...not found Checking for program /usr/bin/git...not found Checking for program /home/hp150306/t00196/bin/git...not found Checking for program /home/hp150306/t00196/shortcut/git...not found Checking for program /opt/FJSVxosmmm/sbin/git...not found Checking for program /home/hp150306/t00196/git...not found ================================================================================ TEST configureCLanguage from PETSc.options.languages(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/languages.py:27) TESTING: configureCLanguage from PETSc.options.languages(config/PETSc/options/languages.py:27) Choose whether to compile the PETSc library using a C or C++ compiler C language is C Defined "CLANGUAGE_C" to "1" ================================================================================ TEST configureDirectories from PETSc.options.petscdir(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/petscdir.py:23) TESTING: configureDirectories from PETSc.options.petscdir(config/PETSc/options/petscdir.py:23) Checks PETSC_DIR and sets if not set Version Information: #define PETSC_VERSION_RELEASE 1 #define PETSC_VERSION_MAJOR 3 #define PETSC_VERSION_MINOR 6 #define PETSC_VERSION_SUBMINOR 3 #define PETSC_VERSION_PATCH 0 #define PETSC_VERSION_DATE "Dec, 03, 2015" #define PETSC_VERSION_GIT "v3.6.2-37-g6fc57b5" #define PETSC_VERSION_DATE_GIT "2015-12-03 23:02:05 -0600" #define PETSC_VERSION_(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_LT(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_LE(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_GT(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_GE(MAJOR,MINOR,SUBMINOR) \ Defined make macro "DIR" to "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3" ================================================================================ TEST getDatafilespath from PETSc.options.dataFilesPath(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/dataFilesPath.py:29) TESTING: getDatafilespath from PETSc.options.dataFilesPath(config/PETSc/options/dataFilesPath.py:29) Checks what DATAFILESPATH should be ================================================================================ TEST configureInstallationMethod from PETSc.options.petscclone(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/petscclone.py:20) TESTING: configureInstallationMethod from PETSc.options.petscclone(config/PETSc/options/petscclone.py:20) This is a tarball installation ================================================================================ TEST configureArchitecture from PETSc.options.arch(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/arch.py:25) TESTING: configureArchitecture from PETSc.options.arch(config/PETSc/options/arch.py:25) Checks PETSC_ARCH and sets if not set Defined "ARCH" to ""petsc-3.6.3_patch_debug"" ================================================================================ TEST setInstallDir from PETSc.options.installDir(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/installDir.py:35) TESTING: setInstallDir from PETSc.options.installDir(config/PETSc/options/installDir.py:35) setup installDir to either prefix or if that is not set to PETSC_DIR/PETSC_ARCH ================================================================================ TEST saveReconfigure from PETSc.options.installDir(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/installDir.py:74) TESTING: saveReconfigure from PETSc.options.installDir(config/PETSc/options/installDir.py:74) ================================================================================ TEST cleanInstallDir from PETSc.options.installDir(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/installDir.py:67) TESTING: cleanInstallDir from PETSc.options.installDir(config/PETSc/options/installDir.py:67) ================================================================================ TEST configureInstallDir from PETSc.options.installDir(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/installDir.py:51) TESTING: configureInstallDir from PETSc.options.installDir(config/PETSc/options/installDir.py:51) Makes installDir subdirectories if it does not exist for both prefix install location and PETSc work install location Changed persistence directory to /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-3.6.3_patch_debug/lib/petsc/conf ================================================================================ TEST restoreReconfigure from PETSc.options.installDir(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/installDir.py:87) TESTING: restoreReconfigure from PETSc.options.installDir(config/PETSc/options/installDir.py:87) ================================================================================ TEST setExternalPackagesDir from PETSc.options.externalpackagesdir(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/externalpackagesdir.py:15) TESTING: setExternalPackagesDir from PETSc.options.externalpackagesdir(config/PETSc/options/externalpackagesdir.py:15) ================================================================================ TEST cleanExternalpackagesDir from PETSc.options.externalpackagesdir(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/externalpackagesdir.py:22) TESTING: cleanExternalpackagesDir from PETSc.options.externalpackagesdir(config/PETSc/options/externalpackagesdir.py:22) ================================================================================ TEST printEnvVariables from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1538) TESTING: printEnvVariables from config.setCompilers(config/BuildSystem/config/setCompilers.py:1538) **** printenv **** Timezone_ntp_server1=10.0.160.15 Timezone_ntp_server2=10.0.160.1 DEPOT_REPOS_ROOT=/depot/repos NII_PARENTIPS=10.246.0.65;10.0.2.131 PJM_O_WORKDIR=/volume2/home/hp150306/t00196/source/petsc-3.6.3 NII_PGID= DEPOT_AUTOINST_ROOT=/depot/repos/instconf InstallerServeNFS=1 CFMBaseDir=/opt/kusu/cfm OMPI_CKPTCONFIG=0x00 PJM_O_SHELL=/bin/bash MANPATH=:/opt/kusu/man Timezone_utc=0 Timezone_zone=Asia/Tokyo KUSU_TMP=/tmp root_password_auth=off PYTHONPATH=/opt/primitive/lib64/python2.6/site-packages:/opt/primitive/lib/python2.6/site-packages:/opt/primitive/lib64/python2.4/site-packages:/opt/primitive/lib/python2.4/site-packages:/opt/kusu/lib64/python:/opt/kusu/lib/python: KUSU_ROOT=/opt/kusu PublicDNSZone=k NII_PEERIP=0 DEPOT_DOCS_ROOT=/depot/www/kits NII_HAGROUP=, InstNum= TUNING_XINET_MAX_CLIENTS=100 PIXIE_ROOT=/tftpboot/kusu Keyboard=jp106 NII_PARENTIP=10.224.0.92 PJM_JOBID=5213057 LS_COLORS=no=00:fi=00:di=00;34:ln=00;36:pi=40;33:so=00;35:bd=40;33;01:cd=40;33;01:or=01;05;37;41:mi=01;05;37;41:ex=00;32:*.cmd=00;32:*.exe=00;32:*.com=00;32:*.btm=00;32:*.bat=00;32:*.sh=00;32:*.csh=00;32:*.tar=00;31:*.tgz=00;31:*.arj=00;31:*.taz=00;31:*.lzh=00;31:*.zip=00;31:*.z=00;31:*.Z=00;31:*.gz=00;31:*.bz2=00;31:*.bz=00;31:*.tz=00;31:*.rpm=00;31:*.cpio=00;31:*.jpg=00;35:*.gif=00;35:*.bmp=00;35:*.xbm=00;35:*.xpm=00;35:*.png=00;35:*.tif=00;35: Env_base=K-1.2.0-20-1 DB_POOLER_MAX_CLIENTS=32768 snmp_trap_receivers= NII_NGTYPE=compute-diskless PJM_DPREFIX=#PJM LMGRD_PATH= PJM_O_PATH=/usr/lib64/qt-3.3/bin:/opt/local/openssh/bin:/opt/FJSVtclang/check:/opt/FJSVtclang/GM-1.2.0-20/bin:/opt/FJSVtclang/1.2.0/util/bin:/usr/local/bin:/bin:/usr/bin:/usr/local/bin/SU/bin:/opt/local/gfarm/bin:/opt/local/Python-2.7.3/bin:/home/hp150306/t00196/bin:/home/hp150306/t00196/shortcut:/home/hp150306/t00196/bin:/home/hp150306/t00196/shortcut SYSLOG_SERVER=disabled passwordless_root_on_compute=on SHLVL=1 NII_NICDEF0=tofu0|10.246.0.97|255.224.0.0|10.224.0.0|-tofu0|10.255.255.254|0||02:00:10:17:01:c3|provision PETSC_ARCH=petsc-3.6.3_patch_debug KUSU_LOGFILE=/var/log/kusu/kusu.log NII_NID=9242 PETSC_DIR=/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 CFM_SERVICE=multicast MODULESHOME=/usr/share/Modules KUSU_MAXLOGNUM=10 NII_INSTALLERS=10.224.0.92 PRIMITIVE_ROOT=/opt/primitive DEPOT_CONTRIB_ROOT=/depot/contrib MULTICAST_ADDR=239.0.0.80 NII_HOSTNAME=d01-037 PrimaryInstaller=cs01p03 MASTER_UUID=KUSU NII_BOOTNIC=tofu0 TMPDIR=./ MODULEPATH=/usr/share/Modules/modulefiles:/etc/modulefiles: NII_NFSROOTSERVER=10.224.0.92 NII_BOOTIP=10.246.0.97 dns1=127.0.0.1 InstallerServeDNS=1 FJPNCKPT_CONFIG=0x00 KUSUSNMPD_LOG_SIZE=5000 KUSU_MAXLOGSIZE=10485760 PROVISION=KUSU InstallerServeDHCP=1 ssh_port=22 TUNING_ENABLED=1 LM_LICENSE_FILE= PJM_JOBNAME=STDIN LD_LIBRARY_PATH=/opt/FJSVpxtof/sparc64fx/lib64:/opt/FJSVtclang/GM-1.2.0-20/lib64:/opt/FJSVpnavi/sparc64fx/lib64:/opt/FJSVXosSclib/lib64 Timezone_ntp_server=10.0.160.14 KUSU_DIST_ARCH=s64fx G_BROKEN_FILENAMES=1 _=./configure DEPOT_REPOS_SCRIPTS=/depot/repos/custom_scripts NII_REPO=/repos/1002 TOFU_HOME=/opt/FJSVpxtof/sparc64fx Language=en_US KusuAuthScheme=files PGBOUNCER_LOG_SIZE=100 KUSU_DHCP_TIMEOUT=120 InstallerServeNTP=1 NII_OSTYPE=xtcos-1.3-sparc64fx PJM_O_HOST=fe01p08 KUSU_DB_ENGINE=postgres NII_REPOID=1002 KUSU_LOGLEVEL=DEBUG NII_INSTALLTYPE=diskless NII_SNMPD=10.224.0.92 NII_NGID=18 KUSU_HEARTBEAT_INTERFACE=bond0 PJM_JOBDIR=/volume2/home/hp150306/t00196/source/petsc-3.6.3 DEPOT_REPOS_POST=/depot/repos/post_scripts DB_POOLER_POOL_SIZE=50000 ssh_old_port=22 NII_DBSERVERPORT=6432 DB_POOLER_PORT=6432 PJM_O_LOGNAME=t00196 PATH=/opt/FJSVtclang/check:/opt/FJSVtclang/GM-1.2.0-20/bin:/opt/kusu/bin:/opt/kusu/sbin:/usr/pgsql-9.0/bin:/usr/local/bin:/bin:/usr/bin:/home/hp150306/t00196/bin:/home/hp150306/t00196/shortcut:/opt/FJSVxosmmm/sbin PJM_ENVIRONMENT=INTERACT NII_DBSERVERIP=10.0.160.20 TERM=xterm KUSU_INSTALLER_GW=10.1.161.254 DNSZone=k PRESERVE_NODE_IP=1 PJM_O_HOME=/home/hp150306/t00196 CFM_PROTOCOL=broadcast NII_NFSROOTOPTS=rw,hard,intr,nolock,async,dev,exec,suid HOME=/home/hp150306/t00196 DEPOT_UPDATES_ROOT=/depot/updates NII_EXTRAID=k-comp_0x02160035 MPI_HOME=/opt/FJSVtclang/GM-1.2.0-20 InstallerServeNIS=0 TUNING_TFTP_MAX_CLIENTS=100 DEPOT_IMAGES_ROOT=/depot/images KUSU_EVENT_LOGFILE=/var/log/kusu/kusu-events.log DB_POOLER_ENABLED=1 TUNING_SSH_MAX_CLIENTS=200 NII_NFSROOTPATH=/export/nfsroot/d01-037 LOADEDMODULES= DEPOT_KITS_ROOT=/depot/kits PJM_O_MAIL=/var/spool/mail/t00196 KUSU_VERSION=2.1 PWD=/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 PJM_O_LANG=en_US.UTF-8 ================================================================================ TEST resetEnvCompilers from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1545) TESTING: resetEnvCompilers from config.setCompilers(config/BuildSystem/config/setCompilers.py:1545) ================================================================================ TEST checkEnvCompilers from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1575) TESTING: checkEnvCompilers from config.setCompilers(config/BuildSystem/config/setCompilers.py:1575) ================================================================================ TEST checkMPICompilerOverride from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1510) TESTING: checkMPICompilerOverride from config.setCompilers(config/BuildSystem/config/setCompilers.py:1510) Check if --with-mpi-dir is used along with CC CXX or FC compiler options. This usually prevents mpi compilers from being used - so issue a warning ================================================================================ TEST requireMpiLdPath from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1529) TESTING: requireMpiLdPath from config.setCompilers(config/BuildSystem/config/setCompilers.py:1529) OpenMPI wrappers require LD_LIBRARY_PATH set ================================================================================ TEST checkVendor from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:402) TESTING: checkVendor from config.setCompilers(config/BuildSystem/config/setCompilers.py:402) Determine the compiler vendor Compiler vendor is "" ================================================================================ TEST checkInitialFlags from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:412) TESTING: checkInitialFlags from config.setCompilers(config/BuildSystem/config/setCompilers.py:412) Initialize the compiler and linker flags Pushing language C Initialized CFLAGS to -Xg -O0 Initialized CFLAGS to -Xg -O0 Initialized LDFLAGS to Popping language C Pushing language CUDA Initialized CUDAFLAGS to Initialized CUDAFLAGS to Initialized LDFLAGS to Popping language CUDA Pushing language Cxx Initialized CXXFLAGS to -Xg -O0 Initialized CXX_CXXFLAGS to Initialized LDFLAGS to Popping language Cxx Pushing language FC Initialized FFLAGS to -X9 -O0 Initialized FFLAGS to -X9 -O0 Initialized LDFLAGS to Popping language FC Initialized CPPFLAGS to Initialized CUDAPPFLAGS to Initialized CXXCPPFLAGS to Initialized CC_LINKER_FLAGS to [] Initialized CXX_LINKER_FLAGS to [] Initialized FC_LINKER_FLAGS to [] Initialized CUDAC_LINKER_FLAGS to [] Initialized sharedLibraryFlags to [] Initialized dynamicLibraryFlags to [] ================================================================================ TEST checkCCompiler from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:538) TESTING: checkCCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:538) Locate a functional C compiler Checking for program /opt/FJSVtclang/check/mpifcc...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/mpifcc...found Defined make macro "CC" to "mpifcc" Pushing language C All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lpetsc-ufod4vtr9mqHvKIQiVAm Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest Popping language C ================================================================================ TEST checkCPreprocessor from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:571) TESTING: checkCPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:571) Locate a functional C preprocessor Checking for program /opt/FJSVtclang/check/mpifcc...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/mpifcc...found Defined make macro "CPP" to "mpifcc -E" Pushing language C Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c" #line 1 "/usr/include/stdlib.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/stdlib.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef int wchar_t; #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 34 "/usr/include/stdlib.h" #line 95 "/usr/include/stdlib.h" typedef struct { int quot; int rem; } div_t; typedef struct { long int quot; long int rem; } ldiv_t; typedef struct { long long int quot; long long int rem; } lldiv_t; extern size_t __ctype_get_mb_cur_max (void) ; extern double atof (const char *__nptr) ; extern int atoi (const char *__nptr) ; extern long int atol (const char *__nptr) ; extern long long int atoll (const char *__nptr) ; extern double strtod (const char * __nptr, char ** __endptr) ; extern float strtof (const char * __nptr, char ** __endptr) ; extern long double strtold (const char * __nptr, char ** __endptr) ; extern long int strtol (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long int strtoul (const char * __nptr, char ** __endptr, int __base) ; extern long long int strtoq (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long long int strtouq (const char * __nptr, char ** __endptr, int __base) ; extern long long int strtoll (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long long int strtoull (const char * __nptr, char ** __endptr, int __base) ; #line 274 "/usr/include/stdlib.h" #line 305 "/usr/include/stdlib.h" extern char *l64a (long int __n) ; extern long int a64l (const char *__s) ; #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; typedef char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 321 "/usr/include/stdlib.h" extern long int random (void) ; extern void srandom (unsigned int __seed) ; extern char *initstate (unsigned int __seed, char *__statebuf, size_t __statelen) ; extern char *setstate (char *__statebuf) ; struct random_data { int32_t *fptr; int32_t *rptr; int32_t *state; int rand_type; int rand_deg; int rand_sep; int32_t *end_ptr; }; extern int random_r (struct random_data * __buf, int32_t * __result) ; extern int srandom_r (unsigned int __seed, struct random_data *__buf) ; extern int initstate_r (unsigned int __seed, char * __statebuf, size_t __statelen, struct random_data * __buf) ; extern int setstate_r (char * __statebuf, struct random_data * __buf) ; extern int rand (void) ; extern void srand (unsigned int __seed) ; extern int rand_r (unsigned int *__seed) ; extern double drand48 (void) ; extern double erand48 (unsigned short int __xsubi[3]) ; extern long int lrand48 (void) ; extern long int nrand48 (unsigned short int __xsubi[3]) ; extern long int mrand48 (void) ; extern long int jrand48 (unsigned short int __xsubi[3]) ; extern void srand48 (long int __seedval) ; extern unsigned short int *seed48 (unsigned short int __seed16v[3]) ; extern void lcong48 (unsigned short int __param[7]) ; struct drand48_data { unsigned short int __x[3]; unsigned short int __old_x[3]; unsigned short int __c; unsigned short int __init; unsigned long long int __a; }; extern int drand48_r (struct drand48_data * __buffer, double * __result) ; extern int erand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, double * __result) ; extern int lrand48_r (struct drand48_data * __buffer, long int * __result) ; extern int nrand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, long int * __result) ; extern int mrand48_r (struct drand48_data * __buffer, long int * __result) ; extern int jrand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, long int * __result) ; extern int srand48_r (long int __seedval, struct drand48_data *__buffer) ; extern int seed48_r (unsigned short int __seed16v[3], struct drand48_data *__buffer) ; extern int lcong48_r (unsigned short int __param[7], struct drand48_data *__buffer) ; extern void *malloc (size_t __size) ; extern void *calloc (size_t __nmemb, size_t __size) ; extern void *realloc (void *__ptr, size_t __size) ; extern void free (void *__ptr) ; extern void cfree (void *__ptr) ; #line 1 "/usr/include/alloca.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/alloca.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 26 "/usr/include/alloca.h" extern void *alloca (size_t __size) ; #line 498 "/usr/include/stdlib.h" extern void *valloc (size_t __size) ; extern int posix_memalign (void **__memptr, size_t __alignment, size_t __size) ; extern void abort (void) ; extern int atexit (void (*__func) (void)) ; extern int on_exit (void (*__func) (int __status, void *__arg), void *__arg) ; extern void exit (int __status) ; extern void _Exit (int __status) ; extern char *getenv (const char *__name) ; extern char *__secure_getenv (const char *__name) ; extern int putenv (char *__string) ; extern int setenv (const char *__name, const char *__value, int __replace) ; extern int unsetenv (const char *__name) ; extern int clearenv (void) ; extern char *mktemp (char *__template) ; extern int mkstemp (char *__template) ; #line 607 "/usr/include/stdlib.h" extern char *mkdtemp (char *__template) ; #line 638 "/usr/include/stdlib.h" extern int system (const char *__command) ; #line 655 "/usr/include/stdlib.h" extern char *realpath (const char * __name, char * __resolved) ; typedef int (*__compar_fn_t) (const void *, const void *); extern void *bsearch (const void *__key, const void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; extern void qsort (void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; extern int abs (int __x) ; extern long int labs (long int __x) ; extern long long int llabs (long long int __x) ; extern div_t div (int __numer, int __denom) ; extern ldiv_t ldiv (long int __numer, long int __denom) ; extern lldiv_t lldiv (long long int __numer, long long int __denom) ; extern char *ecvt (double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *fcvt (double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *gcvt (double __value, int __ndigit, char *__buf) ; extern char *qecvt (long double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *qfcvt (long double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *qgcvt (long double __value, int __ndigit, char *__buf) ; extern int ecvt_r (double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int fcvt_r (double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int qecvt_r (long double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int qfcvt_r (long double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int mblen (const char *__s, size_t __n) ; extern int mbtowc (wchar_t * __pwc, const char * __s, size_t __n) ; extern int wctomb (char *__s, wchar_t __wchar) ; extern size_t mbstowcs (wchar_t * __pwcs, const char * __s, size_t __n) ; extern size_t wcstombs (char * __s, const wchar_t * __pwcs, size_t __n) ; extern int rpmatch (const char *__response) ; #line 820 "/usr/include/stdlib.h" extern int posix_openpt (int __oflag) ; #line 851 "/usr/include/stdlib.h" #line 862 "/usr/include/stdlib.h" extern int getloadavg (double __loadavg[], int __nelem) ; #line 879 "/usr/include/stdlib.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Popping language C ================================================================================ TEST checkCUDACompiler from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:612) TESTING: checkCUDACompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:612) Locate a functional CUDA compiler ================================================================================ TEST checkCUDAPreprocessor from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:652) TESTING: checkCUDAPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:652) Locate a functional CUDA preprocessor ================================================================================ TEST checkCxxCompiler from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:764) TESTING: checkCxxCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:764) Locate a functional Cxx compiler Checking for program /opt/FJSVtclang/check/mpiFCC...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/mpiFCC...found Defined make macro "CXX" to "mpiFCC" Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lpetsc-ufod4vtr9mqHvKIQiVAm Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest Popping language Cxx ================================================================================ TEST checkCxxPreprocessor from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:802) TESTING: checkCxxPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:802) Locate a functional Cxx preprocessor Checking for program /opt/FJSVtclang/check/mpiFCC...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/mpiFCC...found Defined make macro "CXXCPP" to "mpiFCC -E" Pushing language Cxx Executing: mpiFCC -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/FCC.pre" #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conffix.h" extern "C" { } #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/cstdlib" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_prolog.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 33 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 161 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 354 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 59 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_stlport_version.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl_user_config.h" #line 74 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 90 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config_compat.h" #line 28 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config_compat.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config_compat.h" #line 49 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config_compat.h" #line 95 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_site_config.h" #line 30 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_site_config.h" #line 99 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/config/stlcomp.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/config/stl_fujitsu.h" #line 18 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/config/stl_fujitsu.h" #line 28 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/config/stl_fujitsu.h" #line 53 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/config/stlcomp.h" #line 128 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/config/stlcomp.h" #line 102 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/config/stl_confix.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/config/stl_confix.h" #line 111 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 121 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 185 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 196 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 262 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 276 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 297 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 305 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 313 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 321 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 338 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 351 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 372 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 417 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 468 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 496 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 507 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 517 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 542 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 556 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 565 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" namespace std { } namespace __std_alias = std; #line 623 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 643 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 688 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" namespace stlp_priv { using namespace std; } #line 713 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" namespace stlport = std; namespace _STL = std; #line 758 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 784 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 817 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 857 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 871 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 890 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 921 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 936 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 957 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 994 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1022 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1035 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1060 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1091 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1104 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1114 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1148 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1197 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1219 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1237 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 19 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_prolog.h" #line 25 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/cstdlib" #line 1 "/usr/include/stdlib.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/stdlib.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 25 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 35 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 38 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 52 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 34 "/usr/include/stdlib.h" extern "C" { #line 1 "/usr/include/bits/waitflags.h" #line 43 "/usr/include/stdlib.h" #line 1 "/usr/include/bits/waitstatus.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 66 "/usr/include/bits/waitstatus.h" union wait { int w_status; struct { #line 79 "/usr/include/bits/waitstatus.h" unsigned int:16; unsigned int __w_retcode:8; unsigned int __w_coredump:1; unsigned int __w_termsig:7; } __wait_terminated; struct { #line 93 "/usr/include/bits/waitstatus.h" unsigned int:16; unsigned int __w_stopsig:8; unsigned int __w_stopval:8; } __wait_stopped; }; #line 44 "/usr/include/stdlib.h" #line 57 "/usr/include/stdlib.h" #line 75 "/usr/include/stdlib.h" #line 83 "/usr/include/stdlib.h" #line 95 "/usr/include/stdlib.h" typedef struct { int quot; int rem; } div_t; typedef struct { long int quot; long int rem; } ldiv_t; typedef struct { long long int quot; long long int rem; } lldiv_t; extern size_t __ctype_get_mb_cur_max (void) ; extern double atof (const char *__nptr) ; extern int atoi (const char *__nptr) ; extern long int atol (const char *__nptr) ; extern long long int atoll (const char *__nptr) ; extern double strtod (const char * __nptr, char ** __endptr) ; extern float strtof (const char * __nptr, char ** __endptr) ; extern long double strtold (const char * __nptr, char ** __endptr) ; extern long int strtol (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long int strtoul (const char * __nptr, char ** __endptr, int __base) ; extern long long int strtoq (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long long int strtouq (const char * __nptr, char ** __endptr, int __base) ; extern long long int strtoll (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long long int strtoull (const char * __nptr, char ** __endptr, int __base) ; #line 274 "/usr/include/stdlib.h" #line 305 "/usr/include/stdlib.h" extern char *l64a (long int __n) ; extern long int a64l (const char *__s) ; #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" extern "C" { #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 57 "/usr/include/sys/types.h" typedef __ino64_t ino64_t; typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 95 "/usr/include/sys/types.h" typedef __off64_t off64_t; typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/time.h" #line 22 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/time.h" #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" typedef __clock_t clock_t; typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 30 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/time.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/time.h" #line 134 "/usr/include/sys/types.h" typedef __useconds_t useconds_t; typedef __suseconds_t suseconds_t; #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 25 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 35 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 38 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 52 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; typedef char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/time.h" #line 22 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/time.h" #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 30 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/time.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef long int __fd_mask; typedef struct { __fd_mask fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern "C" { extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); } #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blksize_t blksize_t; typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" typedef __blkcnt64_t blkcnt64_t; typedef __fsblkcnt64_t fsblkcnt64_t; typedef __fsfilcnt64_t fsfilcnt64_t; #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" } #line 321 "/usr/include/stdlib.h" extern long int random (void) ; extern void srandom (unsigned int __seed) ; extern char *initstate (unsigned int __seed, char *__statebuf, size_t __statelen) ; extern char *setstate (char *__statebuf) ; struct random_data { int32_t *fptr; int32_t *rptr; int32_t *state; int rand_type; int rand_deg; int rand_sep; int32_t *end_ptr; }; extern int random_r (struct random_data * __buf, int32_t * __result) ; extern int srandom_r (unsigned int __seed, struct random_data *__buf) ; extern int initstate_r (unsigned int __seed, char * __statebuf, size_t __statelen, struct random_data * __buf) ; extern int setstate_r (char * __statebuf, struct random_data * __buf) ; extern int rand (void) ; extern void srand (unsigned int __seed) ; extern int rand_r (unsigned int *__seed) ; extern double drand48 (void) ; extern double erand48 (unsigned short int __xsubi[3]) ; extern long int lrand48 (void) ; extern long int nrand48 (unsigned short int __xsubi[3]) ; extern long int mrand48 (void) ; extern long int jrand48 (unsigned short int __xsubi[3]) ; extern void srand48 (long int __seedval) ; extern unsigned short int *seed48 (unsigned short int __seed16v[3]) ; extern void lcong48 (unsigned short int __param[7]) ; struct drand48_data { unsigned short int __x[3]; unsigned short int __old_x[3]; unsigned short int __c; unsigned short int __init; unsigned long long int __a; }; extern int drand48_r (struct drand48_data * __buffer, double * __result) ; extern int erand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, double * __result) ; extern int lrand48_r (struct drand48_data * __buffer, long int * __result) ; extern int nrand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, long int * __result) ; extern int mrand48_r (struct drand48_data * __buffer, long int * __result) ; extern int jrand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, long int * __result) ; extern int srand48_r (long int __seedval, struct drand48_data *__buffer) ; extern int seed48_r (unsigned short int __seed16v[3], struct drand48_data *__buffer) ; extern int lcong48_r (unsigned short int __param[7], struct drand48_data *__buffer) ; extern void *malloc (size_t __size) ; extern void *calloc (size_t __nmemb, size_t __size) ; extern void *realloc (void *__ptr, size_t __size) ; extern void free (void *__ptr) ; extern void cfree (void *__ptr) ; #line 1 "/usr/include/alloca.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/alloca.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 25 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 35 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 38 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 52 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 26 "/usr/include/alloca.h" extern "C" { extern void *alloca (size_t __size) ; } #line 498 "/usr/include/stdlib.h" extern void *valloc (size_t __size) ; extern int posix_memalign (void **__memptr, size_t __alignment, size_t __size) ; extern void abort (void) ; extern int atexit (void (*__func) (void)) ; extern int on_exit (void (*__func) (int __status, void *__arg), void *__arg) ; extern void exit (int __status) ; extern void _Exit (int __status) ; extern char *getenv (const char *__name) ; extern char *__secure_getenv (const char *__name) ; extern int putenv (char *__string) ; extern int setenv (const char *__name, const char *__value, int __replace) ; extern int unsetenv (const char *__name) ; extern int clearenv (void) ; extern char *mktemp (char *__template) ; extern int mkstemp (char *__template) ; #line 604 "/usr/include/stdlib.h" extern int mkstemp64 (char *__template) ; extern char *mkdtemp (char *__template) ; #line 638 "/usr/include/stdlib.h" extern int system (const char *__command) ; #line 655 "/usr/include/stdlib.h" extern char *realpath (const char * __name, char * __resolved) ; typedef int (*__compar_fn_t) (const void *, const void *); extern void *bsearch (const void *__key, const void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; extern void qsort (void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; extern int abs (int __x) ; extern long int labs (long int __x) ; extern long long int llabs (long long int __x) ; extern div_t div (int __numer, int __denom) ; extern ldiv_t ldiv (long int __numer, long int __denom) ; extern lldiv_t lldiv (long long int __numer, long long int __denom) ; extern char *ecvt (double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *fcvt (double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *gcvt (double __value, int __ndigit, char *__buf) ; extern char *qecvt (long double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *qfcvt (long double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *qgcvt (long double __value, int __ndigit, char *__buf) ; extern int ecvt_r (double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int fcvt_r (double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int qecvt_r (long double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int qfcvt_r (long double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int mblen (const char *__s, size_t __n) ; extern int mbtowc (wchar_t * __pwc, const char * __s, size_t __n) ; extern int wctomb (char *__s, wchar_t __wchar) ; extern size_t mbstowcs (wchar_t * __pwcs, const char * __s, size_t __n) ; extern size_t wcstombs (char * __s, const wchar_t * __pwcs, size_t __n) ; extern int rpmatch (const char *__response) ; extern int getsubopt (char ** __optionp, char *const * __tokens, char ** __valuep) ; extern void setkey (const char *__key) ; extern int posix_openpt (int __oflag) ; extern int grantpt (int __fd) ; extern int unlockpt (int __fd) ; extern char *ptsname (int __fd) ; #line 862 "/usr/include/stdlib.h" extern int getloadavg (double __loadavg[], int __nelem) ; #line 879 "/usr/include/stdlib.h" } #line 31 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/cstdlib" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/cstdlib" namespace std { using ::div_t; using ::ldiv_t; using ::size_t; using ::abs; using ::div; using ::abort; using ::getenv; using ::mblen; using ::mbtowc; using ::system; using ::bsearch; using ::atexit; using ::exit; using ::calloc; using ::free; using ::malloc; using ::realloc; using ::atof; using ::atoi; using ::atol; using ::mbstowcs; using ::strtod; using ::strtol; using ::strtoul; using ::wcstombs; using ::wctomb; using ::qsort; using ::labs; using ::ldiv; using ::llabs; using ::lldiv_t; using ::lldiv; #line 103 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/cstdlib" using ::rand; using ::srand; } #line 116 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/cstdlib" namespace std { inline long abs(long __x) { return ::labs(__x); } inline ldiv_t div(long __x, long __y) { return ::ldiv(__x, __y); } } #line 166 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/cstdlib" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_epilog.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config_compat_post.h" #line 27 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config_compat_post.h" #line 53 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config_compat_post.h" #line 20 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_epilog.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_epilog.h" #line 170 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/cstdlib" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Popping language Cxx ================================================================================ TEST checkFortranCompiler from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:919) TESTING: checkFortranCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:919) Locate a functional Fortran compiler Checking for program /opt/FJSVtclang/check/mpifrt...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/mpifrt...found Defined make macro "FC" to "mpifrt" Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.F Successful compile: Source: program main end Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.F Successful compile: Source: program main end Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.F Successful compile: Source: program main end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lpetsc-ufod4vtr9mqHvKIQiVAm Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.F Successful compile: Source: program main end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest Popping language FC ================================================================================ TEST checkFortranComments from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:940) TESTING: checkFortranComments from config.setCompilers(config/BuildSystem/config/setCompilers.py:940) Make sure fortran comment "!" works Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.F Successful compile: Source: ! comment program main end Fortran comments can use ! in column 1 Popping language FC ================================================================================ TEST checkPIC from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1003) TESTING: checkPIC from config.setCompilers(config/BuildSystem/config/setCompilers.py:1003) Determine the PIC option for each compiler - There needs to be a test that checks that the functionality is actually working Skip checking PIC options on user request ================================================================================ TEST checkLargeFileIO from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1036) TESTING: checkLargeFileIO from config.setCompilers(config/BuildSystem/config/setCompilers.py:1036) ================================================================================ TEST checkArchiver from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1135) TESTING: checkArchiver from config.setCompilers(config/BuildSystem/config/setCompilers.py:1135) Check that the archiver exists and can make a library usable by the compiler Pushing language C Executing: ar -V stdout: GNU ar 2.17 Copyright 2005 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License. This program has absolutely no warranty. Executing: ar -V stdout: GNU ar 2.17 Copyright 2005 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License. This program has absolutely no warranty. Defined make macro "FAST_AR_FLAGS" to "Scq" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int foo(int a) { return a+1; } Checking for program /opt/FJSVtclang/check/ar...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/ar...not found Checking for program /opt/kusu/bin/ar...not found Checking for program /opt/kusu/sbin/ar...not found Checking for program /usr/pgsql-9.0/bin/ar...not found Checking for program /usr/local/bin/ar...not found Checking for program /bin/ar...not found Checking for program /usr/bin/ar...found Defined make macro "AR" to "/usr/bin/ar" Checking for program /opt/FJSVtclang/check/ranlib...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/ranlib...not found Checking for program /opt/kusu/bin/ranlib...not found Checking for program /opt/kusu/sbin/ranlib...not found Checking for program /usr/pgsql-9.0/bin/ranlib...not found Checking for program /usr/local/bin/ranlib...not found Checking for program /bin/ranlib...not found Checking for program /usr/bin/ranlib...found Defined make macro "RANLIB" to "/usr/bin/ranlib -c" Executing: /usr/bin/ar cr /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/libconf1.a /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conf1.o Executing: /usr/bin/ranlib -c /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/libconf1.a Possible ERROR while running ranlib: stderr: /usr/bin/ranlib: '-c': No such file Ranlib is not functional with your archiver. Try --with-ranlib=true if ranlib is unnecessary. Executing: ar -V stdout: GNU ar 2.17 Copyright 2005 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License. This program has absolutely no warranty. Executing: ar -V stdout: GNU ar 2.17 Copyright 2005 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License. This program has absolutely no warranty. Defined make macro "FAST_AR_FLAGS" to "Scq" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int foo(int a) { return a+1; } Checking for program /opt/FJSVtclang/check/ar...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/ar...not found Checking for program /opt/kusu/bin/ar...not found Checking for program /opt/kusu/sbin/ar...not found Checking for program /usr/pgsql-9.0/bin/ar...not found Checking for program /usr/local/bin/ar...not found Checking for program /bin/ar...not found Checking for program /usr/bin/ar...found Defined make macro "AR" to "/usr/bin/ar" Checking for program /opt/FJSVtclang/check/ranlib...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/ranlib...not found Checking for program /opt/kusu/bin/ranlib...not found Checking for program /opt/kusu/sbin/ranlib...not found Checking for program /usr/pgsql-9.0/bin/ranlib...not found Checking for program /usr/local/bin/ranlib...not found Checking for program /bin/ranlib...not found Checking for program /usr/bin/ranlib...found Defined make macro "RANLIB" to "/usr/bin/ranlib" Executing: /usr/bin/ar cr /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/libconf1.a /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conf1.o Executing: /usr/bin/ranlib /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/libconf1.a Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" extern int foo(int); int main() { int b = foo(1); if (b); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -L/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -lconf1 Defined make macro "AR_FLAGS" to "cr" Defined make macro "AR_LIB_SUFFIX" to "a" Popping language C ================================================================================ TEST checkSharedLinker from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1246) TESTING: checkSharedLinker from config.setCompilers(config/BuildSystem/config/setCompilers.py:1246) Check that the linker can produce shared libraries Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Checking shared linker /usr/bin/ar using flags [] Checking for program /usr/bin/ar...found Defined make macro "LD_SHARED" to "/usr/bin/ar" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int foo(void) {printf("hello"); return 0;} Pushing language C Popping language C Executing: /usr/bin/ar cr /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/libconftest.a /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o ; /usr/bin/ranlib /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/libconftest.a Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int foo(void); int main() { int ret = foo(); if(ret);; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -L/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -lconftest Using shared linker /usr/bin/ar with flags [] and library extension a Executing: uname -s stdout: Linux ================================================================================ TEST checkSharedLinkerPaths from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1324) TESTING: checkSharedLinkerPaths from config.setCompilers(config/BuildSystem/config/setCompilers.py:1324) Determine the shared linker path options - IRIX: -rpath - Linux, OSF: -Wl,-rpath, - Solaris: -R - FreeBSD: -Wl,-R, Pushing language C Executing: uname -s stdout: Linux Executing: mpifcc -V Trying C linker flag -Wl,-rpath, Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -Wl,-rpath,/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o Valid C linker flag -Wl,-rpath,/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 Popping language C Pushing language Cxx Executing: uname -s stdout: Linux Executing: mpifcc -V Trying Cxx linker flag -Wl,-rpath, Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -Wl,-rpath,/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o Valid Cxx linker flag -Wl,-rpath,/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 Popping language Cxx Pushing language FC Executing: uname -s stdout: Linux Executing: mpifcc -V Trying FC linker flag -Wl,-rpath, Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.F Successful compile: Source: program main end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -Wl,-rpath,/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o Valid FC linker flag -Wl,-rpath,/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 Popping language FC ================================================================================ TEST checkLibC from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1359) TESTING: checkLibC from config.setCompilers(config/BuildSystem/config/setCompilers.py:1359) Test whether we need to explicitly include libc in shared linking - Mac OSX requires an explicit reference to libc for shared linking ================================================================================ TEST checkDynamicLinker from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1408) TESTING: checkDynamicLinker from config.setCompilers(config/BuildSystem/config/setCompilers.py:1408) Check that the linker can dynamicaly load shared libraries Checking for header: dlfcn.h All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/dlfcn.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/dlfcn.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 27 "/usr/include/dlfcn.h" #line 1 "/usr/include/bits/dlfcn.h" #line 30 "/usr/include/dlfcn.h" #line 52 "/usr/include/dlfcn.h" extern void *dlopen (const char *__file, int __mode) ; extern int dlclose (void *__handle) ; extern void *dlsym (void * __handle, const char * __name) ; #line 80 "/usr/include/dlfcn.h" extern char *dlerror (void) ; #line 188 "/usr/include/dlfcn.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_DLFCN_H" to "1" Checking for functions [dlopen dlsym dlclose] in library ['dl'] [] Pushing language C All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dlopen(); static void _check_dlopen() { dlopen(); } char dlsym(); static void _check_dlsym() { dlsym(); } char dlclose(); static void _check_dlclose() { dlclose(); } int main() { _check_dlopen(); _check_dlsym(); _check_dlclose();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ldl Defined "HAVE_LIBDL" to "1" Popping language C Adding ['dl'] to LIBS Executing: uname -s stdout: Linux Checking dynamic linker /usr/bin/ar using flags [] Checking for program /usr/bin/ar...found Defined make macro "DYNAMICLINKER" to "/usr/bin/ar" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int foo(void) {printf("test");return 0;} Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Pushing language C Popping language C Executing: /usr/bin/ar -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/libconftest.so /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ar: no operation specified Checking dynamic linker mpifcc using flags ['-shared'] Checking for program /opt/FJSVtclang/check/mpifcc...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/mpifcc...found Defined make macro "DYNAMICLINKER" to "mpifcc" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -shared -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -ldl Valid C linker flag -shared Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int foo(void) {printf("test");return 0;} Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/libconftest.so -shared -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { void *handle = dlopen("/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/libconftest.so", 0); int (*foo)(void) = (int (*)(void)) dlsym(handle, "foo"); if (!foo) { printf("Could not load symbol\n"); return -1; } if ((*foo)()) { printf("Invalid return from foo()\n"); return -1; } if (dlclose(handle)) { printf("Could not close library\n"); return -1; } ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -ldl Using dynamic linker mpifcc with flags ['-shared'] and library extension so ================================================================================ TEST output from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1454) TESTING: output from config.setCompilers(config/BuildSystem/config/setCompilers.py:1454) Output module data as defines and substitutions Substituting "CC" with "mpifcc" Substituting "CFLAGS" with "-Xg -O0" Defined make macro "CC_LINKER_SLFLAG" to "-Wl,-rpath," Substituting "CPP" with "mpifcc -E" Substituting "CPPFLAGS" with "" Substituting "CXX" with "mpiFCC" Substituting "CXX_CXXFLAGS" with "" Substituting "CXXFLAGS" with "-Xg -O0" Substituting "CXX_LINKER_SLFLAG" with "-Wl,-rpath," Substituting "CXXCPP" with "mpiFCC -E" Substituting "CXXCPPFLAGS" with "" Substituting "FC" with "mpifrt" Substituting "FFLAGS" with "-X9 -O0" Defined make macro "FC_LINKER_SLFLAG" to "-Wl,-rpath," Substituting "LDFLAGS" with "" Substituting "LIBS" with "-ldl " Substituting "SHARED_LIBRARY_FLAG" with "" Executing: uname -s stdout: Linux ================================================================================ TEST checkSharedDynamicPicOptions from PETSc.options.sharedLibraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/sharedLibraries.py:37) TESTING: checkSharedDynamicPicOptions from PETSc.options.sharedLibraries(config/PETSc/options/sharedLibraries.py:37) ================================================================================ TEST configureSharedLibraries from PETSc.options.sharedLibraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/sharedLibraries.py:53) TESTING: configureSharedLibraries from PETSc.options.sharedLibraries(config/PETSc/options/sharedLibraries.py:53) Checks whether shared libraries should be used, for which you must - Specify --with-shared-libraries - Have found a working shared linker Defines PETSC_USE_SHARED_LIBRARIES if they are used Defined make rule "shared_arch" with dependencies "" and code [] Defined make macro "BUILDSHAREDLIB" to "no" Defined "HAVE_SHARED_LIBRARIES" to "1" Shared libraries - disabled ================================================================================ TEST configureDynamicLibraries from PETSc.options.sharedLibraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/sharedLibraries.py:96) TESTING: configureDynamicLibraries from PETSc.options.sharedLibraries(config/PETSc/options/sharedLibraries.py:96) Checks whether dynamic loading is available (with dlfcn.h and libdl) Defined "HAVE_DYNAMIC_LIBRARIES" to "1" ================================================================================ TEST configureSerializedFunctions from PETSc.options.sharedLibraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/sharedLibraries.py:102) TESTING: configureSerializedFunctions from PETSc.options.sharedLibraries(config/PETSc/options/sharedLibraries.py:102) Defines PETSC_SERIALIZE_FUNCTIONS if they are used Requires shared libraries ================================================================================ TEST configureIndexSize from PETSc.options.indexTypes(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/indexTypes.py:31) TESTING: configureIndexSize from PETSc.options.indexTypes(config/PETSc/options/indexTypes.py:31) Defined make macro "PETSC_INDEX_SIZE" to "32" ================================================================================ TEST configureCompilerFlags from config.compilerFlags(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilerFlags.py:71) TESTING: configureCompilerFlags from config.compilerFlags(config/BuildSystem/config/compilerFlags.py:71) Get the default compiler flags Pushing language C Executing: mpifcc --version Ignoring default options which were overridden using --CFLAGS -Xg -O0 Optimization options found in CFLAGS. Skipping setting defaults Popping language C Pushing language Cxx Executing: mpiFCC --version Ignoring default options which were overridden using --CXXFLAGS -Xg -O0 Optimization options found in CXXFLAGS. Skipping setting defaults Popping language Cxx Pushing language FC Executing: mpifrt --version Ignoring default options which were overridden using --FFLAGS -X9 -O0 Optimization options found in FFLAGS. Skipping setting defaults Popping language FC ================================================================================ TEST configureDebugging from PETSc.options.debugging(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/debugging.py:25) TESTING: configureDebugging from PETSc.options.debugging(config/PETSc/options/debugging.py:25) Defined "USE_ERRORCHECKING" to "1" Executing: mpifcc --help ================================================================================ TEST checkRestrict from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:137) TESTING: checkRestrict from config.compilers(config/BuildSystem/config/compilers.py:137) Check for the C/CXX restrict keyword Pushing language C All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.c Possible ERROR while running compiler: exit code 512 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.c", line 5: error: expected a ";" float * restrict x;; ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.c", line 5: warning: variable "restrict" was declared but never referenced float * restrict x;; ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" int main() { float * restrict x;; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.c", line 5: warning: variable "x" was declared but never referenced float * __restrict__ x;; ^ Source: #include "confdefs.h" #include "conffix.h" int main() { float * __restrict__ x;; return 0; } compilers: Set C restrict keyword to __restrict__ Defined "C_RESTRICT" to " __restrict__" Popping language C ================================================================================ TEST checkCFormatting from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:310) TESTING: checkCFormatting from config.compilers(config/BuildSystem/config/compilers.py:310) Activate format string checking if using the GNU compilers ================================================================================ TEST checkCStaticInline from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:108) TESTING: checkCStaticInline from config.compilers(config/BuildSystem/config/compilers.py:108) Check for C keyword: static inline Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" static inline int foo(int a) {return a;} int main() { foo(1);; return 0; } compilers: Set C StaticInline keyword to static inline Popping language C Defined "C_STATIC_INLINE" to "static inline" ================================================================================ TEST checkDynamicLoadFlag from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:321) TESTING: checkDynamicLoadFlag from config.compilers(config/BuildSystem/config/compilers.py:321) Checks that dlopen() takes RTLD_XXX, and defines PETSC_HAVE_RTLD_XXX if it does Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include char *libname; int main() { dlopen(libname, RTLD_LAZY); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -ldl Defined "HAVE_RTLD_LAZY" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include char *libname; int main() { dlopen(libname, RTLD_NOW); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -ldl Defined "HAVE_RTLD_NOW" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include char *libname; int main() { dlopen(libname, RTLD_LOCAL); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -ldl Defined "HAVE_RTLD_LOCAL" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include char *libname; int main() { dlopen(libname, RTLD_GLOBAL); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -ldl Defined "HAVE_RTLD_GLOBAL" to "1" ================================================================================ TEST checkCLibraries from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:164) TESTING: checkCLibraries from config.compilers(config/BuildSystem/config/compilers.py:164) Determines the libraries needed to link with C Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest -### -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -ldl stdout: /usr/bin/ld --eh-frame-hdr -m elf64_sparc -YP,/usr/lib64 -dynamic-linker /lib64/ld-linux.so.2 /usr/lib64/crt1.o /usr/lib64/crti.o /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtbegin.o -YP,/usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4 -u__metInit -ltrtmet -ltrtmet_c -Qy -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lm -lnsl -lutil //opt/FJSVtclang/GM-1.2.0-20/bin/../lib64/fjrtprof.o -T//opt/FJSVtclang/GM-1.2.0-20/bin/../util/lib/data-256mb.lds -L//opt/FJSVtclang/GM-1.2.0-20/bin/../lib64 -u_xfdb_Init -ltrtfdb -lfjrtcl -ltrtth -L/usr/lib64 -lmpg -lmpgpthread -lpapi -lrt -lelf -ldl -lgcc_s -lgcc -lc -lgcc_s -lgcc -lc /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtend.o -L/opt/FJSVxosmmm/lib64 /usr/lib64/crtn.o //opt/FJSVtclang/GM-1.2.0-20/bin/../lib/aopt2 -ir-strip /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest Popping language C compilers: Checking arg /usr/bin/ld compilers: Unknown arg /usr/bin/ld compilers: Checking arg --eh-frame-hdr compilers: Unknown arg --eh-frame-hdr compilers: Checking arg -m compilers: Unknown arg -m compilers: Checking arg elf64_sparc compilers: Unknown arg elf64_sparc compilers: Checking arg -YP,/usr/lib64 compilers: Unknown arg -YP,/usr/lib64 compilers: Checking arg -dynamic-linker compilers: Unknown arg -dynamic-linker compilers: Checking arg /lib64/ld-linux.so.2 compilers: Unknown arg /lib64/ld-linux.so.2 compilers: Checking arg /usr/lib64/crt1.o compilers: Unknown arg /usr/lib64/crt1.o compilers: Checking arg /usr/lib64/crti.o compilers: Unknown arg /usr/lib64/crti.o compilers: Checking arg /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtbegin.o compilers: Unknown arg /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtbegin.o compilers: Checking arg -YP,/usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4 compilers: Unknown arg -YP,/usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4 compilers: Checking arg -u__metInit compilers: Unknown arg -u__metInit compilers: Checking arg -ltrtmet compilers: Found library : -ltrtmet compilers: Checking arg -ltrtmet_c compilers: Found library : -ltrtmet_c compilers: Checking arg -Qy compilers: Unknown arg -Qy compilers: Checking arg -o compilers: Unknown arg -o compilers: Checking arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest compilers: Unknown arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest compilers: Checking arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o compilers: Unknown arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o compilers: Checking arg -ldl compilers: Found library : -ldl compilers: Checking arg -L/opt/FJSVpxtof/sparc64fx/lib64 compilers: Found library directory: -L/opt/FJSVpxtof/sparc64fx/lib64 compilers: Checking arg -L/opt/FJSVtclang/GM-1.2.0-20/lib64 compilers: Found library directory: -L/opt/FJSVtclang/GM-1.2.0-20/lib64 compilers: Checking arg -lmpi compilers: Found library : -lmpi compilers: Checking arg -ltofucom compilers: Found library : -ltofucom compilers: Checking arg -ltofutop compilers: Found library : -ltofutop compilers: Checking arg -lm compilers: Checking arg -lnsl compilers: Found library : -lnsl compilers: Checking arg -lutil compilers: Found library : -lutil compilers: Checking arg //opt/FJSVtclang/GM-1.2.0-20/bin/../lib64/fjrtprof.o compilers: Unknown arg //opt/FJSVtclang/GM-1.2.0-20/bin/../lib64/fjrtprof.o compilers: Checking arg -T//opt/FJSVtclang/GM-1.2.0-20/bin/../util/lib/data-256mb.lds compilers: Unknown arg -T//opt/FJSVtclang/GM-1.2.0-20/bin/../util/lib/data-256mb.lds compilers: Checking arg -L//opt/FJSVtclang/GM-1.2.0-20/bin/../lib64 compilers: Found library directory: -L//opt/FJSVtclang/GM-1.2.0-20/lib64 compilers: Checking arg -u_xfdb_Init compilers: Unknown arg -u_xfdb_Init compilers: Checking arg -ltrtfdb compilers: Found library : -ltrtfdb compilers: Checking arg -lfjrtcl compilers: Found library : -lfjrtcl compilers: Checking arg -ltrtth compilers: Found library : -ltrtth compilers: Checking arg -L/usr/lib64 compilers: Checking arg -lmpg compilers: Found library : -lmpg compilers: Checking arg -lmpgpthread compilers: Found library : -lmpgpthread compilers: Checking arg -lpapi compilers: Found library : -lpapi compilers: Checking arg -lrt compilers: Found library : -lrt compilers: Checking arg -lelf compilers: Found library : -lelf compilers: Checking arg -ldl compilers: Checking arg -lgcc_s compilers: Found library : -lgcc_s compilers: Checking arg -lgcc compilers: Skipping system library: -lgcc compilers: Checking arg -lc compilers: Skipping system library: -lc compilers: Checking arg -lgcc_s compilers: Checking arg -lgcc compilers: Skipping system library: -lgcc compilers: Checking arg -lc compilers: Skipping system library: -lc compilers: Checking arg /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtend.o compilers: Unknown arg /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtend.o compilers: Checking arg -L/opt/FJSVxosmmm/lib64 compilers: Found library directory: -L/opt/FJSVxosmmm/lib64 compilers: Checking arg /usr/lib64/crtn.o compilers: Unknown arg /usr/lib64/crtn.o compilers: Checking arg //opt/FJSVtclang/GM-1.2.0-20/bin/../lib/aopt2 compilers: Unknown arg //opt/FJSVtclang/GM-1.2.0-20/bin/../lib/aopt2 compilers: Checking arg -ir-strip compilers: Unknown arg -ir-strip compilers: Checking arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest compilers: Unknown arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest compilers: Libraries needed to link C code with another linker: ['-ltrtmet', '-ltrtmet_c', '-ldl', '-L/opt/FJSVpxtof/sparc64fx/lib64', '-L/opt/FJSVtclang/GM-1.2.0-20/lib64', '-lmpi', '-ltofucom', '-ltofutop', '-lnsl', '-lutil', '-L//opt/FJSVtclang/GM-1.2.0-20/lib64', '-ltrtfdb', '-lfjrtcl', '-ltrtth', '-lmpg', '-lmpgpthread', '-lpapi', '-lrt', '-lelf', '-lgcc_s', '-L/opt/FJSVxosmmm/lib64'] compilers: Check that C libraries can be used from Fortran Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.F Successful compile: Source: program main end Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.F Successful compile: Source: program main end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.F Successful compile: Source: program main end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lpetsc-ufod4vtr9mqHvKIQiVAm Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.F Successful compile: Source: program main end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest Popping language FC ================================================================================ TEST checkDependencyGenerationFlag from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:1328) TESTING: checkDependencyGenerationFlag from config.compilers(config/BuildSystem/config/compilers.py:1328) Check if -MMD works for dependency generation, and add it if it does Pushing language C Trying C compiler flag -MMD -MP Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 -MMD -MP /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejected C compiler flag -MMD -MP because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.d) was generated Trying C compiler flag -MMD Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 -MMD /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejected C compiler flag -MMD because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.d) was generated Trying C compiler flag -xMMD Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 -xMMD /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejected C compiler flag -xMMD because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.d) was generated Trying C compiler flag -qmakedep=gcc Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 -qmakedep=gcc /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Possible ERROR while running compiler: stderr: fcc: warning: -qmakedep=gcc is unrecognized option. This option is passed to the linker. Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -qmakedep=gcc due to fcc: warning: -qmakedep=gcc is unrecognized option. This option is passed to the linker. Rejected C compiler flag -qmakedep=gcc Trying C compiler flag -MD Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 -MD /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejected C compiler flag -MD because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.d) was generated Popping language C Pushing language Cxx Trying Cxx compiler flag -MMD -MP Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 -MMD -MP /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejected Cxx compiler flag -MMD -MP because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.d) was generated Trying Cxx compiler flag -MMD Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 -MMD /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejected Cxx compiler flag -MMD because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.d) was generated Trying Cxx compiler flag -xMMD Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 -xMMD /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejected Cxx compiler flag -xMMD because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.d) was generated Trying Cxx compiler flag -qmakedep=gcc Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 -qmakedep=gcc /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc Possible ERROR while running compiler: stderr: FCC: warning: -qmakedep=gcc is unrecognized option. This option is passed to the linker. Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -qmakedep=gcc due to FCC: warning: -qmakedep=gcc is unrecognized option. This option is passed to the linker. Rejected Cxx compiler flag -qmakedep=gcc Trying Cxx compiler flag -MD Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 -MD /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejected Cxx compiler flag -MD because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.d) was generated Popping language Cxx Pushing language FC Trying FC compiler flag -MMD -MP Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -X9 -O0 -MMD -MP /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.F Successful compile: Source: program main end Rejected FC compiler flag -MMD -MP because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.d) was generated Trying FC compiler flag -MMD Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -X9 -O0 -MMD /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.F Successful compile: Source: program main end Rejected FC compiler flag -MMD because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.d) was generated Trying FC compiler flag -xMMD Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -X9 -O0 -xMMD /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.F Successful compile: Source: program main end Rejected FC compiler flag -xMMD because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.d) was generated Trying FC compiler flag -qmakedep=gcc Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -X9 -O0 -qmakedep=gcc /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.F Possible ERROR while running compiler: stderr: frt: warning: -qmakedep=gcc cannot be specified. Source: program main end Rejected FC compiler flag -qmakedep=gcc because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.d) was generated Trying FC compiler flag -MD Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -X9 -O0 -MD /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.F Successful compile: Source: program main end Rejected FC compiler flag -MD because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.d) was generated Popping language FC ================================================================================ TEST checkC99Flag from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:1372) TESTING: checkC99Flag from config.compilers(config/BuildSystem/config/compilers.py:1372) Check for -std=c99 or equivalent flag Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Possible ERROR while running compiler: exit code 512 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c", line 10: error: expected an expression for (int i=0; i<2; i++){ ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c", line 10: error: identifier "i" is undefined for (int i=0; i<2; i++){ ^ 2 errors detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" int main() { int x[2],y; y = 5; // c++ comment int j = 2; for (int i=0; i<2; i++){ x[i] = i*j*y; } ; return 0; } Rejecting compiler flag due to nonzero status from link Rejecting compiler flag due to "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c", line 10: error: expected an expression for (int i=0; i<2; i++){ ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c", line 10: error: identifier "i" is undefined for (int i=0; i<2; i++){ ^ 2 errors detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c". PETSc Error: No output file produced Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 -std=c99 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c", line 6: warning: variable "x" was set but never used int x[2],y; ^ Source: #include "confdefs.h" #include "conffix.h" int main() { int x[2],y; y = 5; // c++ comment int j = 2; for (int i=0; i<2; i++){ x[i] = i*j*y; } ; return 0; } Accepted C99 compile flag: -std=c99 Popping language C Executing: mpiFCC --help ================================================================================ TEST checkRestrict from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:137) TESTING: checkRestrict from config.compilers(config/BuildSystem/config/compilers.py:137) Check for the C/CXX restrict keyword Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.cc Possible ERROR while running compiler: exit code 512 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.cc", line 5: error: expected a ";" float * restrict x;; ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.cc", line 5: warning: variable "restrict" was declared but never referenced float * restrict x;; ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.cc". Source: #include "confdefs.h" #include "conffix.h" int main() { float * restrict x;; return 0; } Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.cc Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.cc", line 5: warning: variable "x" was declared but never referenced float * __restrict__ x;; ^ Source: #include "confdefs.h" #include "conffix.h" int main() { float * __restrict__ x;; return 0; } compilers: Set Cxx restrict keyword to __restrict__ Defined "CXX_RESTRICT" to " __restrict__" Popping language Cxx ================================================================================ TEST checkCxxNamespace from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:359) TESTING: checkCxxNamespace from config.compilers(config/BuildSystem/config/compilers.py:359) Checks that C++ compiler supports namespaces, and if it does defines HAVE_CXX_NAMESPACE Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" namespace petsc {int dummy;} int main() { ; return 0; } Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" template struct a {}; namespace trouble{ template struct a : public ::a {}; } trouble::a uugh; int main() { ; return 0; } Popping language Cxx compilers: C++ has namespaces Defined "HAVE_CXX_NAMESPACE" to "1" ================================================================================ TEST checkCxxOptionalExtensions from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:334) TESTING: checkCxxOptionalExtensions from config.compilers(config/BuildSystem/config/compilers.py:334) Check whether the C++ compiler (IBM xlC, OSF5) need special flag for .c files which contain C++ Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { class somename { int i; };; return 0; } Added Cxx compiler flag Popping language Cxx ================================================================================ TEST checkCxxStaticInline from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:122) TESTING: checkCxxStaticInline from config.compilers(config/BuildSystem/config/compilers.py:122) Check for C++ keyword: static inline Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" static inline int foo(int a) {return a;} int main() { foo(1);; return 0; } compilers: Set Cxx StaticInline keyword to static inline Popping language Cxx Defined "CXX_STATIC_INLINE" to "static inline" ================================================================================ TEST checkCxxLibraries from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:413) TESTING: checkCxxLibraries from config.compilers(config/BuildSystem/config/compilers.py:413) Determines the libraries needed to link with C++ Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest -### -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl stdout: /usr/bin/ld --eh-frame-hdr -m elf64_sparc -YP,/usr/lib64 -dynamic-linker /lib64/ld-linux.so.2 /usr/lib64/crt1.o /usr/lib64/crti.o /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtbegin.o -YP,/usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4 -u__metInit -ltrtmetcpp -ltrtmet_c -Qy -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi_cxx -lmpi -ltofucom -ltofutop -lm -lnsl -lutil //opt/FJSVtclang/GM-1.2.0-20/bin/../lib64/fjrtprof.o -T//opt/FJSVtclang/GM-1.2.0-20/bin/../util/lib/data-256mb.lds -L//opt/FJSVtclang/GM-1.2.0-20/bin/../lib64 -lfjdemgl -u_xfdb_Init -ltrtfdb -lfjrtcl -ltrtth -L/usr/lib64 -lstd_mt -lmpg -lmpgpthread -lpthread -lpapi -lm -lrt -lelf -ldl -lstdc++ -lgcc_s -lgcc -lc -lgcc_s -lgcc -lc /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtend.o -L/opt/FJSVxosmmm/lib64 /usr/lib64/crtn.o //opt/FJSVtclang/GM-1.2.0-20/bin/../lib/aopt2 -ir-strip /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest Popping language Cxx compilers: Checking arg /usr/bin/ld compilers: Unknown arg /usr/bin/ld compilers: Checking arg --eh-frame-hdr compilers: Unknown arg --eh-frame-hdr compilers: Checking arg -m compilers: Unknown arg -m compilers: Checking arg elf64_sparc compilers: Unknown arg elf64_sparc compilers: Checking arg -YP,/usr/lib64 compilers: Unknown arg -YP,/usr/lib64 compilers: Checking arg -dynamic-linker compilers: Unknown arg -dynamic-linker compilers: Checking arg /lib64/ld-linux.so.2 compilers: Unknown arg /lib64/ld-linux.so.2 compilers: Checking arg /usr/lib64/crt1.o compilers: Unknown arg /usr/lib64/crt1.o compilers: Checking arg /usr/lib64/crti.o compilers: Unknown arg /usr/lib64/crti.o compilers: Checking arg /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtbegin.o compilers: Unknown arg /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtbegin.o compilers: Checking arg -YP,/usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4 compilers: Unknown arg -YP,/usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4 compilers: Checking arg -u__metInit compilers: Unknown arg -u__metInit compilers: Checking arg -ltrtmetcpp compilers: Found library: -ltrtmetcpp compilers: Checking arg -ltrtmet_c compilers: Found library: -ltrtmet_c Library already in C list so skipping in C++ compilers: Checking arg -Qy compilers: Unknown arg -Qy compilers: Checking arg -o compilers: Unknown arg -o compilers: Checking arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest compilers: Unknown arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest compilers: Checking arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o compilers: Unknown arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o compilers: Checking arg -ltrtmet compilers: Found library: -ltrtmet Library already in C list so skipping in C++ compilers: Checking arg -ltrtmet_c compilers: Checking arg -ldl compilers: Found library: -ldl Library already in C list so skipping in C++ compilers: Checking arg -L/opt/FJSVpxtof/sparc64fx/lib64 compilers: Found library directory: -L/opt/FJSVpxtof/sparc64fx/lib64 compilers: Checking arg -L/opt/FJSVtclang/GM-1.2.0-20/lib64 compilers: Found library directory: -L/opt/FJSVtclang/GM-1.2.0-20/lib64 compilers: Checking arg -lmpi compilers: Found library: -lmpi Library already in C list so skipping in C++ compilers: Checking arg -ltofucom compilers: Found library: -ltofucom Library already in C list so skipping in C++ compilers: Checking arg -ltofutop compilers: Found library: -ltofutop Library already in C list so skipping in C++ compilers: Checking arg -lnsl compilers: Found library: -lnsl Library already in C list so skipping in C++ compilers: Checking arg -lutil compilers: Found library: -lutil Library already in C list so skipping in C++ compilers: Checking arg -L//opt/FJSVtclang/GM-1.2.0-20/lib64 compilers: Found library directory: -L//opt/FJSVtclang/GM-1.2.0-20/lib64 compilers: Checking arg -ltrtfdb compilers: Found library: -ltrtfdb Library already in C list so skipping in C++ compilers: Checking arg -lfjrtcl compilers: Found library: -lfjrtcl Library already in C list so skipping in C++ compilers: Checking arg -ltrtth compilers: Found library: -ltrtth Library already in C list so skipping in C++ compilers: Checking arg -lmpg compilers: Found library: -lmpg Library already in C list so skipping in C++ compilers: Checking arg -lmpgpthread compilers: Found library: -lmpgpthread Library already in C list so skipping in C++ compilers: Checking arg -lpapi compilers: Found library: -lpapi Library already in C list so skipping in C++ compilers: Checking arg -lrt compilers: Found library: -lrt Library already in C list so skipping in C++ compilers: Checking arg -lelf compilers: Found library: -lelf Library already in C list so skipping in C++ compilers: Checking arg -lgcc_s compilers: Found library: -lgcc_s Library already in C list so skipping in C++ compilers: Checking arg -L/opt/FJSVxosmmm/lib64 compilers: Found library directory: -L/opt/FJSVxosmmm/lib64 compilers: Checking arg -ldl compilers: Checking arg -L/opt/FJSVpxtof/sparc64fx/lib64 compilers: Checking arg -L/opt/FJSVtclang/GM-1.2.0-20/lib64 compilers: Checking arg -lmpi_cxx compilers: Found library: -lmpi_cxx compilers: Checking arg -lmpi compilers: Checking arg -ltofucom compilers: Checking arg -ltofutop compilers: Checking arg -lm compilers: Checking arg -lnsl compilers: Checking arg -lutil compilers: Checking arg //opt/FJSVtclang/GM-1.2.0-20/bin/../lib64/fjrtprof.o compilers: Unknown arg //opt/FJSVtclang/GM-1.2.0-20/bin/../lib64/fjrtprof.o compilers: Checking arg -T//opt/FJSVtclang/GM-1.2.0-20/bin/../util/lib/data-256mb.lds compilers: Unknown arg -T//opt/FJSVtclang/GM-1.2.0-20/bin/../util/lib/data-256mb.lds compilers: Checking arg -L//opt/FJSVtclang/GM-1.2.0-20/bin/../lib64 compilers: Checking arg -lfjdemgl compilers: Found library: -lfjdemgl compilers: Checking arg -u_xfdb_Init compilers: Unknown arg -u_xfdb_Init compilers: Checking arg -ltrtfdb compilers: Checking arg -lfjrtcl compilers: Checking arg -ltrtth compilers: Checking arg -L/usr/lib64 compilers: Checking arg -lstd_mt compilers: Found library: -lstd_mt compilers: Checking arg -lmpg compilers: Checking arg -lmpgpthread compilers: Checking arg -lpthread compilers: Found library: -lpthread compilers: Checking arg -lpapi compilers: Checking arg -lm compilers: Checking arg -lrt compilers: Checking arg -lelf compilers: Checking arg -ldl compilers: Checking arg -lstdc++ compilers: Found library: -lstdc++ compilers: Checking arg -lgcc_s compilers: Checking arg -lgcc compilers: Skipping system library: -lgcc compilers: Checking arg -lc compilers: Skipping system library: -lc compilers: Checking arg -lgcc_s compilers: Checking arg -lgcc compilers: Skipping system library: -lgcc compilers: Checking arg -lc compilers: Skipping system library: -lc compilers: Checking arg /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtend.o compilers: Unknown arg /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtend.o compilers: Checking arg -L/opt/FJSVxosmmm/lib64 compilers: Checking arg /usr/lib64/crtn.o compilers: Unknown arg /usr/lib64/crtn.o compilers: Checking arg //opt/FJSVtclang/GM-1.2.0-20/bin/../lib/aopt2 compilers: Unknown arg //opt/FJSVtclang/GM-1.2.0-20/bin/../lib/aopt2 compilers: Checking arg -ir-strip compilers: Unknown arg -ir-strip compilers: Checking arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest compilers: Unknown arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest compilers: Libraries needed to link Cxx code with another linker: ['-ltrtmetcpp', '-L/opt/FJSVpxtof/sparc64fx/lib64', '-L/opt/FJSVtclang/GM-1.2.0-20/lib64', '-L//opt/FJSVtclang/GM-1.2.0-20/lib64', '-L/opt/FJSVxosmmm/lib64', '-lmpi_cxx', '-lfjdemgl', '-lstd_mt', '-lpthread', '-lstdc++'] compilers: Check that Cxx libraries can be used from C Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lpetsc-ufod4vtr9mqHvKIQiVAm Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest Popping language C compilers: Check that Cxx libraries can be used from Fortran Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.F Successful compile: Source: program main end Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.F Successful compile: Source: program main end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.F Successful compile: Source: program main end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lpetsc-ufod4vtr9mqHvKIQiVAm Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.F Successful compile: Source: program main end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest Popping language FC ================================================================================ TEST checkCxx11 from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:374) TESTING: checkCxx11 from config.compilers(config/BuildSystem/config/compilers.py:374) Determine the option needed to support the C++11 dialect We auto-detect C++11 if the compiler supports it without options, otherwise we require with-cxx-dialect=C++11 to try adding flags to support it. Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc", line 4: catastrophic error: cannot open source file "random" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" #include template constexpr T Cubed( T x ) { return x*x*x; } int main() { std::random_device rd; std::mt19937 mt(rd()); std::normal_distribution dist(0,1); const double x = dist(mt); ; return 0; } Rejecting compiler flag due to nonzero status from link Rejecting compiler flag due to "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc", line 4: catastrophic error: cannot open source file "random" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc". Compilation terminated. PETSc Error: No output file produced Popping language Cxx ================================================================================ TEST checkFortranTypeSizes from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:572) TESTING: checkFortranTypeSizes from config.compilers(config/BuildSystem/config/compilers.py:572) Check whether real*8 is supported and suggest flags which will allow support Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.F Possible ERROR while running compiler: stderr: Fortran diagnostic messages: program name(main) jwd2006i-i "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.F", line 2: 'variable' is declared but never referenced. Source: program main real*8 variable end Popping language FC ================================================================================ TEST checkFortranNameMangling from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:631) TESTING: checkFortranNameMangling from config.compilers(config/BuildSystem/config/compilers.py:631) Checks Fortran name mangling, and defines HAVE_FORTRAN_UNDERSCORE, HAVE_FORTRAN_NOUNDERSCORE, HAVE_FORTRAN_CAPS, or HAVE_FORTRAN_STDCALL Testing Fortran mangling type underscore with code void d1chk_(void){return;} Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" void d1chk_(void){return;} Popping language C Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.F Successful compile: Source: program main call d1chk() end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/confc.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language FC compilers: Fortran name mangling is underscore Defined "HAVE_FORTRAN_UNDERSCORE" to "1" ================================================================================ TEST checkFortranNameManglingDouble from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:668) TESTING: checkFortranNameManglingDouble from config.compilers(config/BuildSystem/config/compilers.py:668) Checks if symbols containing an underscore append an extra underscore, and defines HAVE_FORTRAN_UNDERSCORE_UNDERSCORE if necessary Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" void d1_chk__(void){return;} Popping language C Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.F Successful compile: Source: program main call d1_chk() end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/confc.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o: In function `MAIN__': conftest.F:(.text+0x30): undefined reference to `d1_chk_' /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o:(.data+0x0): undefined reference to `d1_chk_' Popping language FC ================================================================================ TEST checkFortranPreprocessor from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:678) TESTING: checkFortranPreprocessor from config.compilers(config/BuildSystem/config/compilers.py:678) Determine if Fortran handles preprocessing properly Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.F Successful compile: Source: program main #define dummy dummy #ifndef dummy fooey #endif end Added FC compiler flag Popping language FC compilers: Fortran uses CPP preprocessor ================================================================================ TEST checkFortranDefineCompilerOption from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:699) TESTING: checkFortranDefineCompilerOption from config.compilers(config/BuildSystem/config/compilers.py:699) Check if -WF,-Dfoobar or -Dfoobar is the compiler option to define a macro Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -X9 -O0 -DTesting /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.F Successful compile: Source: program main #define dummy dummy #ifndef Testing fooey #endif end Defined make macro "FC_DEFINE_FLAG" to "-D" Popping language FC compilers: Fortran uses -D for defining macro ================================================================================ TEST checkFortranLibraries from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:716) TESTING: checkFortranLibraries from config.compilers(config/BuildSystem/config/compilers.py:716) Substitutes for FLIBS the libraries needed to link with Fortran This macro is intended to be used in those situations when it is necessary to mix, e.g. C++ and Fortran 77, source code into a single program or shared library. For example, if object files from a C++ and Fortran 77 compiler must be linked together, then the C++ compiler/linker must be used for linking (since special C++-ish things need to happen at link time like calling global constructors, instantiating templates, enabling exception support, etc.). However, the Fortran 77 intrinsic and run-time libraries must be linked in as well, but the C++ compiler/linker does not know how to add these Fortran 77 libraries. This code was translated from the autoconf macro which was packaged in its current form by Matthew D. Langston . However, nearly all of this macro came from the OCTAVE_FLIBS macro in octave-2.0.13/aclocal.m4, and full credit should go to John W. Eaton for writing this extremely useful macro. Pushing language FC Executing: mpifrt -V Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.F Successful compile: Source: program main end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest -v -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language FC compilers: Libraries needed to link Fortran code with the C linker: [] compilers: Libraries needed to link Fortran main with the C linker: [] compilers: Check that Fortran libraries can be used from C Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lpetsc-ufod4vtr9mqHvKIQiVAm Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest Popping language C compilers: Check that Fortran libraries can be used from C++ Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lpetsc-ufod4vtr9mqHvKIQiVAm Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest Popping language Cxx compilers: Fortran libraries can be used from C++ ================================================================================ TEST checkFortranLinkingCxx from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:1062) TESTING: checkFortranLinkingCxx from config.compilers(config/BuildSystem/config/compilers.py:1062) Check that Fortran can be linked against C++ Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" extern "C" void d1chk_(void); void foo(void){d1chk_();} Popping language Cxx Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" extern "C" void d1chk_(void); void d1chk_(void){return;} Popping language Cxx Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.F Successful compile: Source: program main call d1chk() end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/cxxobj.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/confc.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/cxxobj.o:(.eh_frame+0x12): undefined reference to `__gxx_personality_v0' Popping language FC Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" extern "C" void d1chk_(void); void d1chk_(void){return;} Popping language Cxx Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.F Successful compile: Source: program main call d1chk() end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/cxxobj.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/confc.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language FC compilers: Fortran can link C++ functions using the C++ compiler libraries ================================================================================ TEST checkFortran90 from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:1097) TESTING: checkFortran90 from config.compilers(config/BuildSystem/config/compilers.py:1097) Determine whether the Fortran compiler handles F90 Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.F Successful compile: Source: program main INTEGER, PARAMETER :: int = SELECTED_INT_KIND(8) INTEGER (KIND=int) :: ierr ierr = 1 end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "USING_F90" to "1" Fortran compiler supports F90 Popping language FC ================================================================================ TEST checkFortran2003 from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:1110) TESTING: checkFortran2003 from config.compilers(config/BuildSystem/config/compilers.py:1110) Determine whether the Fortran compiler handles F2003 Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.F Successful compile: Source: program main use,intrinsic :: iso_c_binding Type(C_Ptr),Dimension(:),Pointer :: CArray character(kind=c_char),pointer :: nullc => null() character(kind=c_char,len=5),dimension(:),pointer::list1 allocate(list1(5)) CArray = (/(c_loc(list1(i)),i=1,5),c_loc(nullc)/) end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "USING_F2003" to "1" Fortran compiler supports F2003 Popping language FC ================================================================================ TEST checkFortran90Array from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:1130) TESTING: checkFortran90Array from config.compilers(config/BuildSystem/config/compilers.py:1130) Check for F90 array interfaces Executing: uname -s stdout: Linux Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include void f90arraytest_(void* a1, void* a2,void* a3, void* i) { printf("arrays [%p %p %p]\n",a1,a2,a3); fflush(stdout); return; } void f90ptrtest_(void* a1, void* a2,void* a3, void* i, void* p1 ,void* p2, void* p3) { printf("arrays [%p %p %p]\n",a1,a2,a3); if ((p1 == p3) && (p1 != p2)) { printf("pointers match! [%p %p] [%p]\n",p1,p3,p2); fflush(stdout); } else { printf("pointers do not match! [%p %p] [%p]\n",p1,p3,p2); fflush(stdout); exit(111); } return; } Popping language C Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.F Successful compile: Source: program main Interface Subroutine f90ptrtest(p1,p2,p3,i) integer, pointer :: p1(:,:) integer, pointer :: p2(:,:) integer, pointer :: p3(:,:) integer i End Subroutine End Interface integer, pointer :: ptr1(:,:),ptr2(:,:) integer, target :: array(6:8,9:21) integer in in = 25 ptr1 => array ptr2 => array call f90arraytest(ptr1,ptr2,ptr1,in) call f90ptrtest(ptr1,ptr2,ptr1,in) end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/fooobj.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest stdout: arrays [0x20000ac0 0x20000ac0 0x20000ac0] arrays [0x20000a60 0x20000a00 0x20000a60] pointers match! [0x20000a60 0x20000a60] [0x20000a00] Popping language FC Defined "HAVE_F90_2PTR_ARG" to "1" compilers: F90 compiler uses two arguments for array pointers ================================================================================ TEST checkFortranModuleInclude from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:1217) TESTING: checkFortranModuleInclude from config.compilers(config/BuildSystem/config/compilers.py:1217) Figures out what flag is used to specify the include path for Fortran modules Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.F Successful compile: Source: module configtest integer testint parameter (testint = 42) end module configtest Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/confdir -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.F Successful compile: Source: program main use configtest write(*,*) testint end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/confdir -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/configtest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl compilers: Fortran module include flag -I found Popping language FC ================================================================================ TEST checkFortranModuleOutput from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:1283) TESTING: checkFortranModuleOutput from config.compilers(config/BuildSystem/config/compilers.py:1283) Figures out what flag is used to specify the include path for Fortran modules Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -module /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/confdir -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.F Successful compile: Source: module configtest integer testint parameter (testint = 42) end module configtest compilers: Fortran module output flag -module failed Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -module:/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/confdir -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.F Successful compile: Source: module configtest integer testint parameter (testint = 42) end module configtest compilers: Fortran module output flag -module: failed Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -fmod=/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/confdir -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.F Possible ERROR while running compiler: stderr: frt: warning: Invalid suboption mod=/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/confdir specified for -f. Source: module configtest integer testint parameter (testint = 42) end module configtest compilers: Fortran module output flag -fmod= failed Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -J/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/confdir -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.F Possible ERROR while running compiler: stderr: frt: warning: -J/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/confdir is unrecognized option. This option is passed to the linker. Source: module configtest integer testint parameter (testint = 42) end module configtest compilers: Fortran module output flag -J failed Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -M/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/confdir -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.F Successful compile: Source: module configtest integer testint parameter (testint = 42) end module configtest compilers: Fortran module output flag -M found Popping language FC ================================================================================ TEST setupFrameworkCompilers from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:1437) TESTING: setupFrameworkCompilers from config.compilers(config/BuildSystem/config/compilers.py:1437) ================================================================================ TEST configureClosure from config.utilities.closure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/closure.py:18) TESTING: configureClosure from config.utilities.closure(config/BuildSystem/config/utilities/closure.py:18) Determine if Apple ^close syntax is supported in C Pushing language C All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure/conftest.c Possible ERROR while running compiler: exit code 512 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure/conftest.c", line 6: error: expected an identifier int (^closure)(int);; ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include int main() { int (^closure)(int);; return 0; } Compile failed inside link ================================================================================ TEST configureFortranCPP from PETSc.options.fortranCPP(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/fortranCPP.py:27) TESTING: configureFortranCPP from PETSc.options.fortranCPP(config/PETSc/options/fortranCPP.py:27) Handle case where Fortran cannot preprocess properly Defined make rule ".f.o .f90.o .f95.o" with dependencies "" and code ['${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FC_FLAGS} ${FFLAGS} -o $@ $<'] Defined make rule ".f.a" with dependencies "" and code ['${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FC_FLAGS} ${FFLAGS} $<', '-${AR} ${AR_FLAGS} ${LIBNAME} $*.o', '-${RM} $*.o'] Defined make rule ".F.o .F90.o .F95.o" with dependencies "" and code ['${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FC_FLAGS} ${FFLAGS} ${FCPPFLAGS} -o $@ $<'] Defined make rule ".F.a" with dependencies "" and code ['${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FC_FLAGS} ${FFLAGS} ${FCPPFLAGS} $<', '-${AR} ${AR_FLAGS} ${LIBNAME} $*.o', '-${RM} $*.o'] Defined "USE_FORTRAN_INTERFACES" to "1" ================================================================================ TEST checkStdC from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:105) TESTING: checkStdC from config.headers(config/BuildSystem/config/headers.py:105) Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include int main() { ; return 0; } Source: #include "confdefs.h" #include "conffix.h" #include Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/string.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/string.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 34 "/usr/include/string.h" extern void *memcpy (void * __dest, const void * __src, size_t __n) ; extern void *memmove (void *__dest, const void *__src, size_t __n) ; extern void *memccpy (void * __dest, const void * __src, int __c, size_t __n) ; extern void *memset (void *__s, int __c, size_t __n) ; extern int memcmp (const void *__s1, const void *__s2, size_t __n) ; extern void *memchr (const void *__s, int __c, size_t __n) ; #line 80 "/usr/include/string.h" extern char *strcpy (char * __dest, const char * __src) ; extern char *strncpy (char * __dest, const char * __src, size_t __n) ; extern char *strcat (char * __dest, const char * __src) ; extern char *strncat (char * __dest, const char * __src, size_t __n) ; extern int strcmp (const char *__s1, const char *__s2) ; extern int strncmp (const char *__s1, const char *__s2, size_t __n) ; extern int strcoll (const char *__s1, const char *__s2) ; extern size_t strxfrm (char * __dest, const char * __src, size_t __n) ; #line 127 "/usr/include/string.h" extern char *strdup (const char *__s) ; #line 164 "/usr/include/string.h" extern char *strchr (const char *__s, int __c) ; extern char *strrchr (const char *__s, int __c) ; #line 180 "/usr/include/string.h" extern size_t strcspn (const char *__s, const char *__reject) ; extern size_t strspn (const char *__s, const char *__accept) ; extern char *strpbrk (const char *__s, const char *__accept) ; extern char *strstr (const char *__haystack, const char *__needle) ; extern char *strtok (char * __s, const char * __delim) ; extern char *__strtok_r (char * __s, const char * __delim, char ** __save_ptr) ; extern char *strtok_r (char * __s, const char * __delim, char ** __save_ptr) ; #line 238 "/usr/include/string.h" extern size_t strlen (const char *__s) ; #line 252 "/usr/include/string.h" extern char *strerror (int __errnum) ; extern int __xpg_strerror_r (int __errnum, char *__buf, size_t __buflen) ; #line 285 "/usr/include/string.h" extern void __bzero (void *__s, size_t __n) ; extern void bcopy (const void *__src, void *__dest, size_t __n) ; extern void bzero (void *__s, size_t __n) ; extern int bcmp (const void *__s1, const void *__s2, size_t __n) ; extern char *index (const char *__s, int __c) ; extern char *rindex (const char *__s, int __c) ; extern int ffs (int __i) ; #line 329 "/usr/include/string.h" extern int strcasecmp (const char *__s1, const char *__s2) ; extern int strncasecmp (const char *__s1, const char *__s2, size_t __n) ; #line 350 "/usr/include/string.h" extern char *strsep (char ** __stringp, const char * __delim) ; #line 396 "/usr/include/string.h" #line 431 "/usr/include/string.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Source: #include "confdefs.h" #include "conffix.h" #include Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/stdlib.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/stdlib.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef int wchar_t; #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 34 "/usr/include/stdlib.h" #line 95 "/usr/include/stdlib.h" typedef struct { int quot; int rem; } div_t; typedef struct { long int quot; long int rem; } ldiv_t; typedef struct { long long int quot; long long int rem; } lldiv_t; extern size_t __ctype_get_mb_cur_max (void) ; extern double atof (const char *__nptr) ; extern int atoi (const char *__nptr) ; extern long int atol (const char *__nptr) ; extern long long int atoll (const char *__nptr) ; extern double strtod (const char * __nptr, char ** __endptr) ; extern float strtof (const char * __nptr, char ** __endptr) ; extern long double strtold (const char * __nptr, char ** __endptr) ; extern long int strtol (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long int strtoul (const char * __nptr, char ** __endptr, int __base) ; extern long long int strtoq (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long long int strtouq (const char * __nptr, char ** __endptr, int __base) ; extern long long int strtoll (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long long int strtoull (const char * __nptr, char ** __endptr, int __base) ; #line 274 "/usr/include/stdlib.h" #line 305 "/usr/include/stdlib.h" extern char *l64a (long int __n) ; extern long int a64l (const char *__s) ; #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; typedef char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 321 "/usr/include/stdlib.h" extern long int random (void) ; extern void srandom (unsigned int __seed) ; extern char *initstate (unsigned int __seed, char *__statebuf, size_t __statelen) ; extern char *setstate (char *__statebuf) ; struct random_data { int32_t *fptr; int32_t *rptr; int32_t *state; int rand_type; int rand_deg; int rand_sep; int32_t *end_ptr; }; extern int random_r (struct random_data * __buf, int32_t * __result) ; extern int srandom_r (unsigned int __seed, struct random_data *__buf) ; extern int initstate_r (unsigned int __seed, char * __statebuf, size_t __statelen, struct random_data * __buf) ; extern int setstate_r (char * __statebuf, struct random_data * __buf) ; extern int rand (void) ; extern void srand (unsigned int __seed) ; extern int rand_r (unsigned int *__seed) ; extern double drand48 (void) ; extern double erand48 (unsigned short int __xsubi[3]) ; extern long int lrand48 (void) ; extern long int nrand48 (unsigned short int __xsubi[3]) ; extern long int mrand48 (void) ; extern long int jrand48 (unsigned short int __xsubi[3]) ; extern void srand48 (long int __seedval) ; extern unsigned short int *seed48 (unsigned short int __seed16v[3]) ; extern void lcong48 (unsigned short int __param[7]) ; struct drand48_data { unsigned short int __x[3]; unsigned short int __old_x[3]; unsigned short int __c; unsigned short int __init; unsigned long long int __a; }; extern int drand48_r (struct drand48_data * __buffer, double * __result) ; extern int erand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, double * __result) ; extern int lrand48_r (struct drand48_data * __buffer, long int * __result) ; extern int nrand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, long int * __result) ; extern int mrand48_r (struct drand48_data * __buffer, long int * __result) ; extern int jrand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, long int * __result) ; extern int srand48_r (long int __seedval, struct drand48_data *__buffer) ; extern int seed48_r (unsigned short int __seed16v[3], struct drand48_data *__buffer) ; extern int lcong48_r (unsigned short int __param[7], struct drand48_data *__buffer) ; extern void *malloc (size_t __size) ; extern void *calloc (size_t __nmemb, size_t __size) ; extern void *realloc (void *__ptr, size_t __size) ; extern void free (void *__ptr) ; extern void cfree (void *__ptr) ; #line 1 "/usr/include/alloca.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/alloca.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 26 "/usr/include/alloca.h" extern void *alloca (size_t __size) ; #line 498 "/usr/include/stdlib.h" extern void *valloc (size_t __size) ; extern int posix_memalign (void **__memptr, size_t __alignment, size_t __size) ; extern void abort (void) ; extern int atexit (void (*__func) (void)) ; extern int on_exit (void (*__func) (int __status, void *__arg), void *__arg) ; extern void exit (int __status) ; extern void _Exit (int __status) ; extern char *getenv (const char *__name) ; extern char *__secure_getenv (const char *__name) ; extern int putenv (char *__string) ; extern int setenv (const char *__name, const char *__value, int __replace) ; extern int unsetenv (const char *__name) ; extern int clearenv (void) ; extern char *mktemp (char *__template) ; extern int mkstemp (char *__template) ; #line 607 "/usr/include/stdlib.h" extern char *mkdtemp (char *__template) ; #line 638 "/usr/include/stdlib.h" extern int system (const char *__command) ; #line 655 "/usr/include/stdlib.h" extern char *realpath (const char * __name, char * __resolved) ; typedef int (*__compar_fn_t) (const void *, const void *); extern void *bsearch (const void *__key, const void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; extern void qsort (void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; extern int abs (int __x) ; extern long int labs (long int __x) ; extern long long int llabs (long long int __x) ; extern div_t div (int __numer, int __denom) ; extern ldiv_t ldiv (long int __numer, long int __denom) ; extern lldiv_t lldiv (long long int __numer, long long int __denom) ; extern char *ecvt (double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *fcvt (double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *gcvt (double __value, int __ndigit, char *__buf) ; extern char *qecvt (long double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *qfcvt (long double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *qgcvt (long double __value, int __ndigit, char *__buf) ; extern int ecvt_r (double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int fcvt_r (double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int qecvt_r (long double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int qfcvt_r (long double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int mblen (const char *__s, size_t __n) ; extern int mbtowc (wchar_t * __pwc, const char * __s, size_t __n) ; extern int wctomb (char *__s, wchar_t __wchar) ; extern size_t mbstowcs (wchar_t * __pwcs, const char * __s, size_t __n) ; extern size_t wcstombs (char * __s, const wchar_t * __pwcs, size_t __n) ; extern int rpmatch (const char *__response) ; #line 820 "/usr/include/stdlib.h" extern int posix_openpt (int __oflag) ; #line 851 "/usr/include/stdlib.h" #line 862 "/usr/include/stdlib.h" extern int getloadavg (double __loadavg[], int __nelem) ; #line 879 "/usr/include/stdlib.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #define ISLOWER(c) ('a' <= (c) && (c) <= 'z') #define TOUPPER(c) (ISLOWER(c) ? 'A' + ((c) - 'a') : (c)) #define XOR(e, f) (((e) && !(f)) || (!(e) && (f))) int main() { int i; for(i = 0; i < 256; i++) if (XOR(islower(i), ISLOWER(i)) || toupper(i) != TOUPPER(i)) exit(2); exit(0); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest Defined "STDC_HEADERS" to "1" ================================================================================ TEST checkStat from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:138) TESTING: checkStat from config.headers(config/BuildSystem/config/headers.py:138) Checks whether stat file-mode macros are broken, and defines STAT_MACROS_BROKEN if they are Source: #include "confdefs.h" #include "conffix.h" #include #include #if defined(S_ISBLK) && defined(S_IFDIR) # if S_ISBLK (S_IFDIR) You lose. # endif #endif #if defined(S_ISBLK) && defined(S_IFCHR) # if S_ISBLK (S_IFCHR) You lose. # endif #endif #if defined(S_ISLNK) && defined(S_IFREG) # if S_ISLNK (S_IFREG) You lose. # endif #endif #if defined(S_ISSOCK) && defined(S_IFREG) # if S_ISSOCK (S_IFREG) You lose. # endif #endif Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; typedef char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 5 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/sys/stat.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/stat.h" #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 40 "/usr/include/sys/stat.h" #line 63 "/usr/include/sys/stat.h" #line 82 "/usr/include/sys/stat.h" #line 104 "/usr/include/sys/stat.h" #line 1 "/usr/include/bits/stat.h" struct stat { __dev_t st_dev; unsigned short int __pad1; __ino_t st_ino; __mode_t st_mode; __nlink_t st_nlink; __uid_t st_uid; __gid_t st_gid; __dev_t st_rdev; unsigned short int __pad2; __off_t st_size; __blksize_t st_blksize; __blkcnt_t st_blocks; struct timespec st_atim; struct timespec st_mtim; struct timespec st_ctim; #line 85 "/usr/include/bits/stat.h" unsigned long int __unused4; unsigned long int __unused5; }; #line 132 "/usr/include/bits/stat.h" #line 151 "/usr/include/bits/stat.h" #line 166 "/usr/include/bits/stat.h" #line 108 "/usr/include/sys/stat.h" #line 126 "/usr/include/sys/stat.h" #line 141 "/usr/include/sys/stat.h" extern int stat (const char * __file, struct stat * __buf) ; extern int fstat (int __fd, struct stat *__buf) ; #line 232 "/usr/include/sys/stat.h" #line 256 "/usr/include/sys/stat.h" extern int lstat (const char * __file, struct stat * __buf) ; #line 279 "/usr/include/sys/stat.h" extern int chmod (const char *__file, __mode_t __mode) ; extern int lchmod (const char *__file, __mode_t __mode) ; extern int fchmod (int __fd, __mode_t __mode) ; #line 304 "/usr/include/sys/stat.h" extern __mode_t umask (__mode_t __mask) ; extern int mkdir (const char *__path, __mode_t __mode) ; #line 328 "/usr/include/sys/stat.h" extern int mknod (const char *__path, __mode_t __mode, __dev_t __dev) ; #line 344 "/usr/include/sys/stat.h" extern int mkfifo (const char *__path, __mode_t __mode) ; #line 357 "/usr/include/sys/stat.h" #line 366 "/usr/include/sys/stat.h" #line 394 "/usr/include/sys/stat.h" extern int __fxstat (int __ver, int __fildes, struct stat *__stat_buf) ; extern int __xstat (int __ver, const char *__filename, struct stat *__stat_buf) ; extern int __lxstat (int __ver, const char *__filename, struct stat *__stat_buf) ; extern int __fxstatat (int __ver, int __fildes, const char *__filename, struct stat *__stat_buf, int __flag) ; #line 428 "/usr/include/sys/stat.h" #line 440 "/usr/include/sys/stat.h" extern int __xmknod (int __ver, const char *__path, __mode_t __mode, __dev_t *__dev) ; extern int __xmknodat (int __ver, int __fd, const char *__path, __mode_t __mode, __dev_t *__dev) ; #line 531 "/usr/include/sys/stat.h" #line 6 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" ================================================================================ TEST checkSysWait from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:173) TESTING: checkSysWait from config.headers(config/BuildSystem/config/headers.py:173) Check for POSIX.1 compatible sys/wait.h, and defines HAVE_SYS_WAIT_H if found Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #ifndef WEXITSTATUS #define WEXITSTATUS(stat_val) ((unsigned)(stat_val) >> 8) #endif #ifndef WIFEXITED #define WIFEXITED(stat_val) (((stat_val) & 255) == 0) #endif int main() { int s; wait (&s); s = WIFEXITED (s) ? WEXITSTATUS (s) : 1; ; return 0; } Defined "HAVE_SYS_WAIT_H" to "1" ================================================================================ TEST checkTime from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:195) TESTING: checkTime from config.headers(config/BuildSystem/config/headers.py:195) Checks if you can safely include both and , and if so defines TIME_WITH_SYS_TIME Checking for header: time.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 30 "/usr/include/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 40 "/usr/include/time.h" #line 1 "/usr/include/bits/time.h" #line 43 "/usr/include/bits/time.h" #line 44 "/usr/include/time.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 58 "/usr/include/time.h" typedef __clock_t clock_t; typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; struct timespec { __time_t tv_sec; long int tv_nsec; }; struct tm { int tm_sec; int tm_min; int tm_hour; int tm_mday; int tm_mon; int tm_year; int tm_wday; int tm_yday; int tm_isdst; long int tm_gmtoff; const char *tm_zone; }; struct itimerspec { struct timespec it_interval; struct timespec it_value; }; struct sigevent; typedef __pid_t pid_t; extern clock_t clock (void) ; extern time_t time (time_t *__timer) ; extern double difftime (time_t __time1, time_t __time0) ; extern time_t mktime (struct tm *__tp) ; extern size_t strftime (char * __s, size_t __maxsize, const char * __format, const struct tm * __tp) ; #line 212 "/usr/include/time.h" #line 227 "/usr/include/time.h" extern struct tm *gmtime (const time_t *__timer) ; extern struct tm *localtime (const time_t *__timer) ; extern struct tm *gmtime_r (const time_t * __timer, struct tm * __tp) ; extern struct tm *localtime_r (const time_t * __timer, struct tm * __tp) ; extern char *asctime (const struct tm *__tp) ; extern char *ctime (const time_t *__timer) ; extern char *asctime_r (const struct tm * __tp, char * __buf) ; extern char *ctime_r (const time_t * __timer, char * __buf) ; extern char *__tzname[2]; extern int __daylight; extern long int __timezone; extern char *tzname[2]; extern void tzset (void) ; extern int daylight; extern long int timezone; extern int stime (const time_t *__when) ; extern time_t timegm (struct tm *__tp) ; extern time_t timelocal (struct tm *__tp) ; extern int dysize (int __year) ; extern int nanosleep (const struct timespec *__requested_time, struct timespec *__remaining); extern int clock_getres (clockid_t __clock_id, struct timespec *__res) ; extern int clock_gettime (clockid_t __clock_id, struct timespec *__tp) ; extern int clock_settime (clockid_t __clock_id, const struct timespec *__tp) ; extern int clock_nanosleep (clockid_t __clock_id, int __flags, const struct timespec *__req, struct timespec *__rem); extern int clock_getcpuclockid (pid_t __pid, clockid_t *__clock_id) ; extern int timer_create (clockid_t __clock_id, struct sigevent * __evp, timer_t * __timerid) ; extern int timer_delete (timer_t __timerid) ; extern int timer_settime (timer_t __timerid, int __flags, const struct itimerspec * __value, struct itimerspec * __ovalue) ; extern int timer_gettime (timer_t __timerid, struct itimerspec *__value) ; extern int timer_getoverrun (timer_t __timerid) ; #line 400 "/usr/include/time.h" #line 415 "/usr/include/time.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_TIME_H" to "1" Checking for header: sys/time.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/sys/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 24 "/usr/include/sys/time.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 26 "/usr/include/sys/time.h" #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 28 "/usr/include/sys/time.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 30 "/usr/include/sys/time.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 32 "/usr/include/sys/time.h" #line 52 "/usr/include/sys/time.h" struct timezone { int tz_minuteswest; int tz_dsttime; }; typedef struct timezone * __timezone_ptr_t; extern int gettimeofday (struct timeval * __tv, __timezone_ptr_t __tz) ; extern int settimeofday (const struct timeval *__tv, const struct timezone *__tz) ; extern int adjtime (const struct timeval *__delta, struct timeval *__olddelta) ; enum __itimer_which { ITIMER_REAL = 0, ITIMER_VIRTUAL = 1, ITIMER_PROF = 2 }; struct itimerval { struct timeval it_interval; struct timeval it_value; }; typedef int __itimer_which_t; extern int getitimer (__itimer_which_t __which, struct itimerval *__value) ; extern int setitimer (__itimer_which_t __which, const struct itimerval * __new, struct itimerval * __old) ; extern int utimes (const char *__file, const struct timeval __tvp[2]) ; extern int lutimes (const char *__file, const struct timeval __tvp[2]) ; extern int futimes (int __fd, const struct timeval __tvp[2]) ; #line 159 "/usr/include/sys/time.h" #line 190 "/usr/include/sys/time.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_TIME_H" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include int main() { struct tm *tp = 0; if (tp); ; return 0; } Defined "TIME_WITH_SYS_TIME" to "1" ================================================================================ TEST checkMath from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:203) TESTING: checkMath from config.headers(config/BuildSystem/config/headers.py:203) Checks for the math headers and defines Checking for header: math.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/math.h" #line 1 "/usr/include/math.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 29 "/usr/include/math.h" #line 1 "/usr/include/bits/huge_val.h" #line 40 "/usr/include/bits/huge_val.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 42 "/usr/include/bits/huge_val.h" typedef union { unsigned char __c[8]; double __d; } __huge_val_t; #line 51 "/usr/include/bits/huge_val.h" static __huge_val_t __huge_val = { { 0x7f, 0xf0, 0, 0, 0, 0, 0, 0 } }; #line 35 "/usr/include/math.h" #line 1 "/usr/include/bits/huge_valf.h" #line 40 "/usr/include/bits/huge_valf.h" typedef union { unsigned char __c[4]; float __f; } __huge_valf_t; #line 49 "/usr/include/bits/huge_valf.h" static __huge_valf_t __huge_valf = { { 0x7f, 0x80, 0, 0 } }; #line 37 "/usr/include/math.h" #line 1 "/usr/include/bits/huge_vall.h" #line 34 "/usr/include/bits/huge_vall.h" typedef union { unsigned char __c[16]; long double __ld; } __huge_vall_t; #line 43 "/usr/include/bits/huge_vall.h" static __huge_vall_t __huge_vall = { { 0x7f, 0xff, 0,0,0,0,0,0,0,0,0,0,0,0,0,0 } }; #line 38 "/usr/include/math.h" #line 1 "/usr/include/bits/inf.h" #line 41 "/usr/include/math.h" #line 1 "/usr/include/bits/nan.h" #line 39 "/usr/include/bits/nan.h" #line 48 "/usr/include/bits/nan.h" static union { unsigned char __c[4]; float __d; } __nan_union = { { 0x7f, 0xc0, 0, 0 } }; #line 44 "/usr/include/math.h" #line 1 "/usr/include/bits/mathdef.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/mathdef.h" #line 47 "/usr/include/bits/mathdef.h" typedef double float_t; typedef double double_t; #line 48 "/usr/include/math.h" #line 66 "/usr/include/math.h" #line 1 "/usr/include/bits/mathcalls.h" extern double acos (double __x) ; extern double __acos (double __x) ; extern double asin (double __x) ; extern double __asin (double __x) ; extern double atan (double __x) ; extern double __atan (double __x) ; extern double atan2 (double __y, double __x) ; extern double __atan2 (double __y, double __x) ; extern double cos (double __x) ; extern double __cos (double __x) ; extern double sin (double __x) ; extern double __sin (double __x) ; extern double tan (double __x) ; extern double __tan (double __x) ; extern double cosh (double __x) ; extern double __cosh (double __x) ; extern double sinh (double __x) ; extern double __sinh (double __x) ; extern double tanh (double __x) ; extern double __tanh (double __x) ; extern double acosh (double __x) ; extern double __acosh (double __x) ; extern double asinh (double __x) ; extern double __asinh (double __x) ; extern double atanh (double __x) ; extern double __atanh (double __x) ; extern double exp (double __x) ; extern double __exp (double __x) ; extern double frexp (double __x, int *__exponent) ; extern double __frexp (double __x, int *__exponent) ; extern double ldexp (double __x, int __exponent) ; extern double __ldexp (double __x, int __exponent) ; extern double log (double __x) ; extern double __log (double __x) ; extern double log10 (double __x) ; extern double __log10 (double __x) ; extern double modf (double __x, double *__iptr) ; extern double __modf (double __x, double *__iptr) ; #line 125 "/usr/include/bits/mathcalls.h" extern double expm1 (double __x) ; extern double __expm1 (double __x) ; extern double log1p (double __x) ; extern double __log1p (double __x) ; extern double logb (double __x) ; extern double __logb (double __x) ; extern double exp2 (double __x) ; extern double __exp2 (double __x) ; extern double log2 (double __x) ; extern double __log2 (double __x) ; extern double pow (double __x, double __y) ; extern double __pow (double __x, double __y) ; extern double sqrt (double __x) ; extern double __sqrt (double __x) ; extern double hypot (double __x, double __y) ; extern double __hypot (double __x, double __y) ; extern double cbrt (double __x) ; extern double __cbrt (double __x) ; extern double ceil (double __x) ; extern double __ceil (double __x) ; extern double fabs (double __x) ; extern double __fabs (double __x) ; extern double floor (double __x) ; extern double __floor (double __x) ; extern double fmod (double __x, double __y) ; extern double __fmod (double __x, double __y) ; extern int __isinf (double __value) ; extern int __finite (double __value) ; extern int isinf (double __value) ; extern int finite (double __value) ; extern double drem (double __x, double __y) ; extern double __drem (double __x, double __y) ; extern double significand (double __x) ; extern double __significand (double __x) ; extern double copysign (double __x, double __y) ; extern double __copysign (double __x, double __y) ; extern double nan (const char *__tagb) ; extern double __nan (const char *__tagb) ; extern int __isnan (double __value) ; extern int isnan (double __value) ; extern double j0 (double) ; extern double __j0 (double) ; extern double j1 (double) ; extern double __j1 (double) ; extern double jn (int, double) ; extern double __jn (int, double) ; extern double y0 (double) ; extern double __y0 (double) ; extern double y1 (double) ; extern double __y1 (double) ; extern double yn (int, double) ; extern double __yn (int, double) ; extern double erf (double) ; extern double __erf (double) ; extern double erfc (double) ; extern double __erfc (double) ; extern double lgamma (double) ; extern double __lgamma (double) ; extern double tgamma (double) ; extern double __tgamma (double) ; extern double gamma (double) ; extern double __gamma (double) ; extern double lgamma_r (double, int *__signgamp) ; extern double __lgamma_r (double, int *__signgamp) ; extern double rint (double __x) ; extern double __rint (double __x) ; extern double nextafter (double __x, double __y) ; extern double __nextafter (double __x, double __y) ; extern double nexttoward (double __x, long double __y) ; extern double __nexttoward (double __x, long double __y) ; extern double remainder (double __x, double __y) ; extern double __remainder (double __x, double __y) ; extern double scalbn (double __x, int __n) ; extern double __scalbn (double __x, int __n) ; extern int ilogb (double __x) ; extern int __ilogb (double __x) ; extern double scalbln (double __x, long int __n) ; extern double __scalbln (double __x, long int __n) ; extern double nearbyint (double __x) ; extern double __nearbyint (double __x) ; extern double round (double __x) ; extern double __round (double __x) ; extern double trunc (double __x) ; extern double __trunc (double __x) ; extern double remquo (double __x, double __y, int *__quo) ; extern double __remquo (double __x, double __y, int *__quo) ; extern long int lrint (double __x) ; extern long int __lrint (double __x) ; extern long long int llrint (double __x) ; extern long long int __llrint (double __x) ; extern long int lround (double __x) ; extern long int __lround (double __x) ; extern long long int llround (double __x) ; extern long long int __llround (double __x) ; extern double fdim (double __x, double __y) ; extern double __fdim (double __x, double __y) ; extern double fmax (double __x, double __y) ; extern double __fmax (double __x, double __y) ; extern double fmin (double __x, double __y) ; extern double __fmin (double __x, double __y) ; extern int __fpclassify (double __value) ; extern int __signbit (double __value) ; extern double fma (double __x, double __y, double __z) ; extern double __fma (double __x, double __y, double __z) ; extern double scalb (double __x, double __n) ; extern double __scalb (double __x, double __n) ; #line 72 "/usr/include/math.h" #line 1 "/usr/include/bits/mathcalls.h" extern float acosf (float __x) ; extern float __acosf (float __x) ; extern float asinf (float __x) ; extern float __asinf (float __x) ; extern float atanf (float __x) ; extern float __atanf (float __x) ; extern float atan2f (float __y, float __x) ; extern float __atan2f (float __y, float __x) ; extern float cosf (float __x) ; extern float __cosf (float __x) ; extern float sinf (float __x) ; extern float __sinf (float __x) ; extern float tanf (float __x) ; extern float __tanf (float __x) ; extern float coshf (float __x) ; extern float __coshf (float __x) ; extern float sinhf (float __x) ; extern float __sinhf (float __x) ; extern float tanhf (float __x) ; extern float __tanhf (float __x) ; extern float acoshf (float __x) ; extern float __acoshf (float __x) ; extern float asinhf (float __x) ; extern float __asinhf (float __x) ; extern float atanhf (float __x) ; extern float __atanhf (float __x) ; extern float expf (float __x) ; extern float __expf (float __x) ; extern float frexpf (float __x, int *__exponent) ; extern float __frexpf (float __x, int *__exponent) ; extern float ldexpf (float __x, int __exponent) ; extern float __ldexpf (float __x, int __exponent) ; extern float logf (float __x) ; extern float __logf (float __x) ; extern float log10f (float __x) ; extern float __log10f (float __x) ; extern float modff (float __x, float *__iptr) ; extern float __modff (float __x, float *__iptr) ; #line 125 "/usr/include/bits/mathcalls.h" extern float expm1f (float __x) ; extern float __expm1f (float __x) ; extern float log1pf (float __x) ; extern float __log1pf (float __x) ; extern float logbf (float __x) ; extern float __logbf (float __x) ; extern float exp2f (float __x) ; extern float __exp2f (float __x) ; extern float log2f (float __x) ; extern float __log2f (float __x) ; extern float powf (float __x, float __y) ; extern float __powf (float __x, float __y) ; extern float sqrtf (float __x) ; extern float __sqrtf (float __x) ; extern float hypotf (float __x, float __y) ; extern float __hypotf (float __x, float __y) ; extern float cbrtf (float __x) ; extern float __cbrtf (float __x) ; extern float ceilf (float __x) ; extern float __ceilf (float __x) ; extern float fabsf (float __x) ; extern float __fabsf (float __x) ; extern float floorf (float __x) ; extern float __floorf (float __x) ; extern float fmodf (float __x, float __y) ; extern float __fmodf (float __x, float __y) ; extern int __isinff (float __value) ; extern int __finitef (float __value) ; extern int isinff (float __value) ; extern int finitef (float __value) ; extern float dremf (float __x, float __y) ; extern float __dremf (float __x, float __y) ; extern float significandf (float __x) ; extern float __significandf (float __x) ; extern float copysignf (float __x, float __y) ; extern float __copysignf (float __x, float __y) ; extern float nanf (const char *__tagb) ; extern float __nanf (const char *__tagb) ; extern int __isnanf (float __value) ; extern int isnanf (float __value) ; extern float j0f (float) ; extern float __j0f (float) ; extern float j1f (float) ; extern float __j1f (float) ; extern float jnf (int, float) ; extern float __jnf (int, float) ; extern float y0f (float) ; extern float __y0f (float) ; extern float y1f (float) ; extern float __y1f (float) ; extern float ynf (int, float) ; extern float __ynf (int, float) ; extern float erff (float) ; extern float __erff (float) ; extern float erfcf (float) ; extern float __erfcf (float) ; extern float lgammaf (float) ; extern float __lgammaf (float) ; extern float tgammaf (float) ; extern float __tgammaf (float) ; extern float gammaf (float) ; extern float __gammaf (float) ; extern float lgammaf_r (float, int *__signgamp) ; extern float __lgammaf_r (float, int *__signgamp) ; extern float rintf (float __x) ; extern float __rintf (float __x) ; extern float nextafterf (float __x, float __y) ; extern float __nextafterf (float __x, float __y) ; extern float nexttowardf (float __x, long double __y) ; extern float __nexttowardf (float __x, long double __y) ; extern float remainderf (float __x, float __y) ; extern float __remainderf (float __x, float __y) ; extern float scalbnf (float __x, int __n) ; extern float __scalbnf (float __x, int __n) ; extern int ilogbf (float __x) ; extern int __ilogbf (float __x) ; extern float scalblnf (float __x, long int __n) ; extern float __scalblnf (float __x, long int __n) ; extern float nearbyintf (float __x) ; extern float __nearbyintf (float __x) ; extern float roundf (float __x) ; extern float __roundf (float __x) ; extern float truncf (float __x) ; extern float __truncf (float __x) ; extern float remquof (float __x, float __y, int *__quo) ; extern float __remquof (float __x, float __y, int *__quo) ; extern long int lrintf (float __x) ; extern long int __lrintf (float __x) ; extern long long int llrintf (float __x) ; extern long long int __llrintf (float __x) ; extern long int lroundf (float __x) ; extern long int __lroundf (float __x) ; extern long long int llroundf (float __x) ; extern long long int __llroundf (float __x) ; extern float fdimf (float __x, float __y) ; extern float __fdimf (float __x, float __y) ; extern float fmaxf (float __x, float __y) ; extern float __fmaxf (float __x, float __y) ; extern float fminf (float __x, float __y) ; extern float __fminf (float __x, float __y) ; extern int __fpclassifyf (float __value) ; extern int __signbitf (float __value) ; extern float fmaf (float __x, float __y, float __z) ; extern float __fmaf (float __x, float __y, float __z) ; extern float scalbf (float __x, float __n) ; extern float __scalbf (float __x, float __n) ; #line 95 "/usr/include/math.h" #line 129 "/usr/include/math.h" #line 1 "/usr/include/bits/mathcalls.h" extern long double acosl (long double __x) ; extern long double __acosl (long double __x) ; extern long double asinl (long double __x) ; extern long double __asinl (long double __x) ; extern long double atanl (long double __x) ; extern long double __atanl (long double __x) ; extern long double atan2l (long double __y, long double __x) ; extern long double __atan2l (long double __y, long double __x) ; extern long double cosl (long double __x) ; extern long double __cosl (long double __x) ; extern long double sinl (long double __x) ; extern long double __sinl (long double __x) ; extern long double tanl (long double __x) ; extern long double __tanl (long double __x) ; extern long double coshl (long double __x) ; extern long double __coshl (long double __x) ; extern long double sinhl (long double __x) ; extern long double __sinhl (long double __x) ; extern long double tanhl (long double __x) ; extern long double __tanhl (long double __x) ; extern long double acoshl (long double __x) ; extern long double __acoshl (long double __x) ; extern long double asinhl (long double __x) ; extern long double __asinhl (long double __x) ; extern long double atanhl (long double __x) ; extern long double __atanhl (long double __x) ; extern long double expl (long double __x) ; extern long double __expl (long double __x) ; extern long double frexpl (long double __x, int *__exponent) ; extern long double __frexpl (long double __x, int *__exponent) ; extern long double ldexpl (long double __x, int __exponent) ; extern long double __ldexpl (long double __x, int __exponent) ; extern long double logl (long double __x) ; extern long double __logl (long double __x) ; extern long double log10l (long double __x) ; extern long double __log10l (long double __x) ; extern long double modfl (long double __x, long double *__iptr) ; extern long double __modfl (long double __x, long double *__iptr) ; #line 125 "/usr/include/bits/mathcalls.h" extern long double expm1l (long double __x) ; extern long double __expm1l (long double __x) ; extern long double log1pl (long double __x) ; extern long double __log1pl (long double __x) ; extern long double logbl (long double __x) ; extern long double __logbl (long double __x) ; extern long double exp2l (long double __x) ; extern long double __exp2l (long double __x) ; extern long double log2l (long double __x) ; extern long double __log2l (long double __x) ; extern long double powl (long double __x, long double __y) ; extern long double __powl (long double __x, long double __y) ; extern long double sqrtl (long double __x) ; extern long double __sqrtl (long double __x) ; extern long double hypotl (long double __x, long double __y) ; extern long double __hypotl (long double __x, long double __y) ; extern long double cbrtl (long double __x) ; extern long double __cbrtl (long double __x) ; extern long double ceill (long double __x) ; extern long double __ceill (long double __x) ; extern long double fabsl (long double __x) ; extern long double __fabsl (long double __x) ; extern long double floorl (long double __x) ; extern long double __floorl (long double __x) ; extern long double fmodl (long double __x, long double __y) ; extern long double __fmodl (long double __x, long double __y) ; extern int __isinfl (long double __value) ; extern int __finitel (long double __value) ; extern int isinfl (long double __value) ; extern int finitel (long double __value) ; extern long double dreml (long double __x, long double __y) ; extern long double __dreml (long double __x, long double __y) ; extern long double significandl (long double __x) ; extern long double __significandl (long double __x) ; extern long double copysignl (long double __x, long double __y) ; extern long double __copysignl (long double __x, long double __y) ; extern long double nanl (const char *__tagb) ; extern long double __nanl (const char *__tagb) ; extern int __isnanl (long double __value) ; extern int isnanl (long double __value) ; extern long double j0l (long double) ; extern long double __j0l (long double) ; extern long double j1l (long double) ; extern long double __j1l (long double) ; extern long double jnl (int, long double) ; extern long double __jnl (int, long double) ; extern long double y0l (long double) ; extern long double __y0l (long double) ; extern long double y1l (long double) ; extern long double __y1l (long double) ; extern long double ynl (int, long double) ; extern long double __ynl (int, long double) ; extern long double erfl (long double) ; extern long double __erfl (long double) ; extern long double erfcl (long double) ; extern long double __erfcl (long double) ; extern long double lgammal (long double) ; extern long double __lgammal (long double) ; extern long double tgammal (long double) ; extern long double __tgammal (long double) ; extern long double gammal (long double) ; extern long double __gammal (long double) ; extern long double lgammal_r (long double, int *__signgamp) ; extern long double __lgammal_r (long double, int *__signgamp) ; extern long double rintl (long double __x) ; extern long double __rintl (long double __x) ; extern long double nextafterl (long double __x, long double __y) ; extern long double __nextafterl (long double __x, long double __y) ; extern long double nexttowardl (long double __x, long double __y) ; extern long double __nexttowardl (long double __x, long double __y) ; extern long double remainderl (long double __x, long double __y) ; extern long double __remainderl (long double __x, long double __y) ; extern long double scalbnl (long double __x, int __n) ; extern long double __scalbnl (long double __x, int __n) ; extern int ilogbl (long double __x) ; extern int __ilogbl (long double __x) ; extern long double scalblnl (long double __x, long int __n) ; extern long double __scalblnl (long double __x, long int __n) ; extern long double nearbyintl (long double __x) ; extern long double __nearbyintl (long double __x) ; extern long double roundl (long double __x) ; extern long double __roundl (long double __x) ; extern long double truncl (long double __x) ; extern long double __truncl (long double __x) ; extern long double remquol (long double __x, long double __y, int *__quo) ; extern long double __remquol (long double __x, long double __y, int *__quo) ; extern long int lrintl (long double __x) ; extern long int __lrintl (long double __x) ; extern long long int llrintl (long double __x) ; extern long long int __llrintl (long double __x) ; extern long int lroundl (long double __x) ; extern long int __lroundl (long double __x) ; extern long long int llroundl (long double __x) ; extern long long int __llroundl (long double __x) ; extern long double fdiml (long double __x, long double __y) ; extern long double __fdiml (long double __x, long double __y) ; extern long double fmaxl (long double __x, long double __y) ; extern long double __fmaxl (long double __x, long double __y) ; extern long double fminl (long double __x, long double __y) ; extern long double __fminl (long double __x, long double __y) ; extern int __fpclassifyl (long double __value) ; extern int __signbitl (long double __value) ; extern long double fmal (long double __x, long double __y, long double __z) ; extern long double __fmal (long double __x, long double __y, long double __z) ; extern long double scalbl (long double __x, long double __n) ; extern long double __scalbl (long double __x, long double __n) ; #line 142 "/usr/include/math.h" extern int signgam; enum { FP_NAN, FP_INFINITE, FP_ZERO, FP_SUBNORMAL, FP_NORMAL }; #line 223 "/usr/include/math.h" #line 235 "/usr/include/math.h" #line 247 "/usr/include/math.h" #line 263 "/usr/include/math.h" #line 275 "/usr/include/math.h" typedef enum { _IEEE_ = -1, _SVID_, _XOPEN_, _POSIX_, _ISOC_ } _LIB_VERSION_TYPE; extern _LIB_VERSION_TYPE _LIB_VERSION; struct exception { int type; char *name; double arg1; double arg2; double retval; }; extern int matherr (struct exception *__exc); #line 334 "/usr/include/math.h" #line 346 "/usr/include/math.h" #line 364 "/usr/include/math.h" #line 383 "/usr/include/math.h" #line 406 "/usr/include/math.h" #line 422 "/usr/include/math.h" #line 430 "/usr/include/math.h" #line 438 "/usr/include/math.h" #line 446 "/usr/include/math.h" #line 454 "/usr/include/math.h" #line 462 "/usr/include/math.h" #line 3 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/math.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_MATH_H" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double pi = M_PI; if (pi); ; return 0; } Found math #defines, like M_PI ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/socket.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/sys/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/socket.h" #line 1 "/usr/include/sys/uio.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/sys/uio.h" #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; typedef char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 25 "/usr/include/sys/uio.h" #line 1 "/usr/include/bits/uio.h" struct iovec { void *iov_base; size_t iov_len; }; #line 30 "/usr/include/sys/uio.h" extern ssize_t readv (int __fd, const struct iovec *__iovec, int __count); extern ssize_t writev (int __fd, const struct iovec *__iovec, int __count); #line 29 "/usr/include/sys/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 31 "/usr/include/sys/socket.h" #line 1 "/usr/include/bits/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 31 "/usr/include/bits/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 7 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "/usr/include/bits/posix1_lim.h" #line 1 "/usr/include/bits/local_lim.h" #line 34 "/usr/include/bits/local_lim.h" #line 1 "/usr/include/linux/limits.h" #line 17 "/usr/include/linux/limits.h" #line 37 "/usr/include/bits/local_lim.h" #line 154 "/usr/include/bits/posix1_lim.h" #line 62 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "/usr/include/bits/posix2_lim.h" #line 87 "/usr/include/bits/posix2_lim.h" #line 66 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 33 "/usr/include/bits/socket.h" typedef __socklen_t socklen_t; enum __socket_type { SOCK_STREAM = 1, SOCK_DGRAM = 2, SOCK_RAW = 3, SOCK_RDM = 4, SOCK_SEQPACKET = 5, SOCK_PACKET = 10 }; #line 96 "/usr/include/bits/socket.h" #line 130 "/usr/include/bits/socket.h" #line 142 "/usr/include/bits/socket.h" #line 1 "/usr/include/bits/sockaddr.h" typedef unsigned short int sa_family_t; #line 148 "/usr/include/bits/socket.h" struct sockaddr { sa_family_t sa_family; char sa_data[14]; }; #line 166 "/usr/include/bits/socket.h" struct sockaddr_storage { sa_family_t ss_family; __uint64_t __ss_align; char __ss_padding[(128 - (2 * sizeof (__uint64_t)))]; }; enum { MSG_OOB = 0x01, MSG_PEEK = 0x02, MSG_DONTROUTE = 0x04, #line 189 "/usr/include/bits/socket.h" MSG_CTRUNC = 0x08, MSG_PROXY = 0x10, MSG_TRUNC = 0x20, MSG_DONTWAIT = 0x40, MSG_EOR = 0x80, MSG_WAITALL = 0x100, MSG_FIN = 0x200, MSG_SYN = 0x400, MSG_CONFIRM = 0x800, MSG_RST = 0x1000, MSG_ERRQUEUE = 0x2000, MSG_NOSIGNAL = 0x4000, MSG_MORE = 0x8000, MSG_CMSG_CLOEXEC = 0x40000000 }; struct msghdr { void *msg_name; socklen_t msg_namelen; struct iovec *msg_iov; size_t msg_iovlen; void *msg_control; size_t msg_controllen; int msg_flags; }; struct cmsghdr { size_t cmsg_len; int cmsg_level; int cmsg_type; unsigned char __cmsg_data []; }; #line 272 "/usr/include/bits/socket.h" extern struct cmsghdr *__cmsg_nxthdr (struct msghdr *__mhdr, struct cmsghdr *__cmsg) ; #line 297 "/usr/include/bits/socket.h" enum { SCM_RIGHTS = 0x01 , SCM_CREDENTIALS = 0x02 }; struct ucred { pid_t pid; uid_t uid; gid_t gid; }; #line 1 "/usr/include/asm/socket.h" #line 1 "/usr/include/asm-s64fx/socket.h" #line 1 "/usr/include/asm/sockios.h" #line 1 "/usr/include/asm-s64fx/sockios.h" #line 12 "/usr/include/asm-s64fx/sockios.h" #line 6 "/usr/include/asm/sockios.h" #line 6 "/usr/include/asm-s64fx/socket.h" #line 19 "/usr/include/asm-s64fx/socket.h" #line 26 "/usr/include/asm-s64fx/socket.h" #line 36 "/usr/include/asm-s64fx/socket.h" #line 6 "/usr/include/asm/socket.h" #line 321 "/usr/include/bits/socket.h" struct linger { int l_onoff; int l_linger; }; #line 37 "/usr/include/sys/socket.h" struct osockaddr { unsigned short int sa_family; unsigned char sa_data[14]; }; enum { SHUT_RD = 0, SHUT_WR, SHUT_RDWR }; #line 96 "/usr/include/sys/socket.h" extern int socket (int __domain, int __type, int __protocol) ; extern int socketpair (int __domain, int __type, int __protocol, int __fds[2]) ; extern int bind (int __fd, const struct sockaddr * __addr, socklen_t __len) ; extern int getsockname (int __fd, struct sockaddr * __addr, socklen_t * __len) ; extern int connect (int __fd, const struct sockaddr * __addr, socklen_t __len); extern int getpeername (int __fd, struct sockaddr * __addr, socklen_t * __len) ; extern ssize_t send (int __fd, const void *__buf, size_t __n, int __flags); extern ssize_t recv (int __fd, void *__buf, size_t __n, int __flags); extern ssize_t sendto (int __fd, const void *__buf, size_t __n, int __flags, const struct sockaddr * __addr, socklen_t __addr_len); extern ssize_t recvfrom (int __fd, void * __buf, size_t __n, int __flags, struct sockaddr * __addr, socklen_t * __addr_len); extern ssize_t sendmsg (int __fd, const struct msghdr *__message, int __flags); extern ssize_t recvmsg (int __fd, struct msghdr *__message, int __flags); extern int getsockopt (int __fd, int __level, int __optname, void * __optval, socklen_t * __optlen) ; extern int setsockopt (int __fd, int __level, int __optname, const void *__optval, socklen_t __optlen) ; extern int listen (int __fd, int __n) ; extern int accept (int __fd, struct sockaddr * __addr, socklen_t * __addr_len); extern int shutdown (int __fd, int __how) ; extern int sockatmark (int __fd) ; extern int isfdtype (int __fd, int __fdtype) ; #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_SOCKET_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/types.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; typedef char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_TYPES_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: malloc.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/malloc.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/malloc.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef long ptrdiff_t; #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef int wchar_t; #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 26 "/usr/include/malloc.h" #line 40 "/usr/include/malloc.h" extern void *malloc (size_t __size) ; extern void *calloc (size_t __nmemb, size_t __size) ; extern void *realloc (void *__ptr, size_t __size) ; extern void free (void *__ptr); extern void cfree (void *__ptr); extern void *memalign (size_t __alignment, size_t __size) ; extern void *valloc (size_t __size) ; extern void * pvalloc (size_t __size) ; extern void *(*__morecore) (ptrdiff_t __size); extern void *__default_morecore (ptrdiff_t __size) ; struct mallinfo { int arena; int ordblks; int smblks; int hblks; int hblkhd; int usmblks; int fsmblks; int uordblks; int fordblks; int keepcost; }; extern struct mallinfo mallinfo (void); #line 122 "/usr/include/malloc.h" #line 130 "/usr/include/malloc.h" extern int mallopt (int __param, int __val); extern int malloc_trim (size_t __pad); extern size_t malloc_usable_size (void *__ptr); extern void malloc_stats (void); extern void *malloc_get_state (void); extern int malloc_set_state (void *__ptr); extern void (*__malloc_initialize_hook) (void); extern void (*__free_hook) (void *__ptr, const void *); extern void *(*__malloc_hook) (size_t __size, const void *); extern void *(*__realloc_hook) (void *__ptr, size_t __size, const void *); extern void *(*__memalign_hook) (size_t __alignment, size_t __size, const void *); extern void (*__after_morecore_hook) (void); extern void __malloc_check_init (void); #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_MALLOC_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: time.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 30 "/usr/include/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 40 "/usr/include/time.h" #line 1 "/usr/include/bits/time.h" #line 43 "/usr/include/bits/time.h" #line 44 "/usr/include/time.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 58 "/usr/include/time.h" typedef __clock_t clock_t; typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; struct timespec { __time_t tv_sec; long int tv_nsec; }; struct tm { int tm_sec; int tm_min; int tm_hour; int tm_mday; int tm_mon; int tm_year; int tm_wday; int tm_yday; int tm_isdst; long int tm_gmtoff; const char *tm_zone; }; struct itimerspec { struct timespec it_interval; struct timespec it_value; }; struct sigevent; typedef __pid_t pid_t; extern clock_t clock (void) ; extern time_t time (time_t *__timer) ; extern double difftime (time_t __time1, time_t __time0) ; extern time_t mktime (struct tm *__tp) ; extern size_t strftime (char * __s, size_t __maxsize, const char * __format, const struct tm * __tp) ; #line 212 "/usr/include/time.h" #line 227 "/usr/include/time.h" extern struct tm *gmtime (const time_t *__timer) ; extern struct tm *localtime (const time_t *__timer) ; extern struct tm *gmtime_r (const time_t * __timer, struct tm * __tp) ; extern struct tm *localtime_r (const time_t * __timer, struct tm * __tp) ; extern char *asctime (const struct tm *__tp) ; extern char *ctime (const time_t *__timer) ; extern char *asctime_r (const struct tm * __tp, char * __buf) ; extern char *ctime_r (const time_t * __timer, char * __buf) ; extern char *__tzname[2]; extern int __daylight; extern long int __timezone; extern char *tzname[2]; extern void tzset (void) ; extern int daylight; extern long int timezone; extern int stime (const time_t *__when) ; extern time_t timegm (struct tm *__tp) ; extern time_t timelocal (struct tm *__tp) ; extern int dysize (int __year) ; extern int nanosleep (const struct timespec *__requested_time, struct timespec *__remaining); extern int clock_getres (clockid_t __clock_id, struct timespec *__res) ; extern int clock_gettime (clockid_t __clock_id, struct timespec *__tp) ; extern int clock_settime (clockid_t __clock_id, const struct timespec *__tp) ; extern int clock_nanosleep (clockid_t __clock_id, int __flags, const struct timespec *__req, struct timespec *__rem); extern int clock_getcpuclockid (pid_t __pid, clockid_t *__clock_id) ; extern int timer_create (clockid_t __clock_id, struct sigevent * __evp, timer_t * __timerid) ; extern int timer_delete (timer_t __timerid) ; extern int timer_settime (timer_t __timerid, int __flags, const struct itimerspec * __value, struct itimerspec * __ovalue) ; extern int timer_gettime (timer_t __timerid, struct itimerspec *__value) ; extern int timer_getoverrun (timer_t __timerid) ; #line 400 "/usr/include/time.h" #line 415 "/usr/include/time.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_TIME_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: Direct.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "Direct.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "Direct.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "Direct.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c".: ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: Ws2tcpip.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "Ws2tcpip.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "Ws2tcpip.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "Ws2tcpip.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c".: ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: endian.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_ENDIAN_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: ieeefp.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "ieeefp.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "ieeefp.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "ieeefp.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c".: ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: strings.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/strings.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/strings.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 30 "/usr/include/strings.h" extern int bcmp (const void *__s1, const void *__s2, size_t __n) ; extern void bcopy (const void *__src, void *__dest, size_t __n) ; extern void bzero (void *__s, size_t __n) ; extern int ffs (int __i) ; extern char *index (const char *__s, int __c) ; extern char *rindex (const char *__s, int __c) ; extern int strcasecmp (const char *__s1, const char *__s2) ; extern int strncasecmp (const char *__s1, const char *__s2, size_t __n) ; #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_STRINGS_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sched.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/sched.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 24 "/usr/include/sched.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 27 "/usr/include/sched.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 30 "/usr/include/sched.h" #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 33 "/usr/include/sched.h" #line 1 "/usr/include/bits/sched.h" #line 36 "/usr/include/bits/sched.h" #line 64 "/usr/include/bits/sched.h" struct sched_param { int __sched_priority; }; extern int clone (int (*__fn) (void *__arg), void *__child_stack, int __flags, void *__arg, ...) ; extern int unshare (int __flags) ; extern int sched_getcpu (void) ; struct __sched_param { int __sched_priority; }; typedef unsigned long int __cpu_mask; typedef struct { __cpu_mask __bits[1024 / (8 * sizeof (__cpu_mask))]; } cpu_set_t; #line 146 "/usr/include/bits/sched.h" #line 164 "/usr/include/bits/sched.h" #line 174 "/usr/include/bits/sched.h" extern int __sched_cpucount (size_t __setsize, const cpu_set_t *__setp) ; extern cpu_set_t *__sched_cpualloc (size_t __count) ; extern void __sched_cpufree (cpu_set_t *__set) ; #line 36 "/usr/include/sched.h" extern int sched_setparam (__pid_t __pid, const struct sched_param *__param) ; extern int sched_getparam (__pid_t __pid, struct sched_param *__param) ; extern int sched_setscheduler (__pid_t __pid, int __policy, const struct sched_param *__param) ; extern int sched_getscheduler (__pid_t __pid) ; extern int sched_yield (void) ; extern int sched_get_priority_max (int __algorithm) ; extern int sched_get_priority_min (int __algorithm) ; extern int sched_rr_get_interval (__pid_t __pid, struct timespec *__t) ; #line 117 "/usr/include/sched.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SCHED_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: cxxabi.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "cxxabi.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "cxxabi.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "cxxabi.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c".: ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/systeminfo.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "sys/systeminfo.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "sys/systeminfo.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "sys/systeminfo.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c".: ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: dos.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "dos.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "dos.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "dos.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c".: ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: WindowsX.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "WindowsX.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "WindowsX.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "WindowsX.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c".: ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/sysinfo.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/sys/sysinfo.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/sys/sysinfo.h" #line 1 "/usr/include/linux/kernel.h" struct sysinfo { long uptime; unsigned long loads[3]; unsigned long totalram; unsigned long freeram; unsigned long sharedram; unsigned long bufferram; unsigned long totalswap; unsigned long freeswap; unsigned short procs; unsigned short pad; unsigned long totalhigh; unsigned long freehigh; unsigned int mem_unit; char _f[20-2*sizeof(long)-sizeof(int)]; }; #line 26 "/usr/include/sys/sysinfo.h" extern int sysinfo (struct sysinfo *__info) ; extern int get_nprocs_conf (void) ; extern int get_nprocs (void) ; extern long int get_phys_pages (void) ; extern long int get_avphys_pages (void) ; #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_SYSINFO_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/wait.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/sys/wait.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/wait.h" #line 1 "/usr/include/signal.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 30 "/usr/include/signal.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 100 "/usr/include/bits/sigset.h" extern int __sigismember (const __sigset_t *, int); extern int __sigaddset (__sigset_t *, int); extern int __sigdelset (__sigset_t *, int); #line 124 "/usr/include/bits/sigset.h" #line 34 "/usr/include/signal.h" typedef __sig_atomic_t sig_atomic_t; typedef __sigset_t sigset_t; #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 58 "/usr/include/signal.h" #line 1 "/usr/include/bits/signum.h" #line 52 "/usr/include/bits/signum.h" #line 72 "/usr/include/bits/signum.h" #line 59 "/usr/include/signal.h" typedef __pid_t pid_t; typedef __uid_t uid_t; typedef void (*__sighandler_t) (int); extern __sighandler_t __sysv_signal (int __sig, __sighandler_t __handler) ; extern __sighandler_t signal (int __sig, __sighandler_t __handler) ; #line 104 "/usr/include/signal.h" #line 112 "/usr/include/signal.h" extern int kill (__pid_t __pid, int __sig) ; extern int killpg (__pid_t __pgrp, int __sig) ; extern int raise (int __sig) ; extern __sighandler_t ssignal (int __sig, __sighandler_t __handler) ; extern int gsignal (int __sig) ; extern void psignal (int __sig, const char *__s); extern int __sigpause (int __sig_or_mask, int __is_sig); #line 169 "/usr/include/signal.h" extern int sigblock (int __mask) ; extern int sigsetmask (int __mask) ; extern int siggetmask (void) ; typedef __sighandler_t sig_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 210 "/usr/include/signal.h" #line 1 "/usr/include/bits/siginfo.h" #line 1 "/usr/include/bits/wordsize.h" #line 26 "/usr/include/bits/siginfo.h" typedef union sigval { int sival_int; void *sival_ptr; } sigval_t; #line 50 "/usr/include/bits/siginfo.h" typedef struct siginfo { int si_signo; int si_errno; int si_code; union { int _pad[((128 / sizeof (int)) - 4)]; struct { __pid_t si_pid; __uid_t si_uid; } _kill; struct { int si_tid; int si_overrun; sigval_t si_sigval; } _timer; struct { __pid_t si_pid; __uid_t si_uid; sigval_t si_sigval; } _rt; struct { __pid_t si_pid; __uid_t si_uid; int si_status; __clock_t si_utime; __clock_t si_stime; } _sigchld; struct { void *si_addr; int si_trapno; } _sigfault; struct { int si_band; int si_fd; } _sigpoll; } _sifields; } siginfo_t; #line 127 "/usr/include/bits/siginfo.h" enum { SI_ASYNCNL = -60, SI_TKILL = -6, SI_SIGIO, SI_ASYNCIO, SI_MESGQ, SI_TIMER, SI_QUEUE, SI_USER, SI_KERNEL = 0x80 }; enum { ILL_ILLOPC = 1, ILL_ILLOPN, ILL_ILLADR, ILL_ILLTRP, ILL_PRVOPC, ILL_PRVREG, ILL_COPROC, ILL_BADSTK }; enum { FPE_INTDIV = 1, FPE_INTOVF, FPE_FLTDIV, FPE_FLTOVF, FPE_FLTUND, FPE_FLTRES, FPE_FLTINV, FPE_FLTSUB }; enum { SEGV_MAPERR = 1, SEGV_ACCERR }; enum { BUS_ADRALN = 1, BUS_ADRERR, BUS_OBJERR }; enum { TRAP_BRKPT = 1, TRAP_TRACE }; enum { CLD_EXITED = 1, CLD_KILLED, CLD_DUMPED, CLD_TRAPPED, CLD_STOPPED, CLD_CONTINUED }; enum { POLL_IN = 1, POLL_OUT, POLL_MSG, POLL_ERR, POLL_PRI, POLL_HUP }; enum { EMT_TAGOVF = 1 }; #line 281 "/usr/include/bits/siginfo.h" typedef struct sigevent { sigval_t sigev_value; int sigev_signo; int sigev_notify; union { int _pad[((64 / sizeof (int)) - 4)]; struct { void (*_function) (sigval_t); void *_attribute; } _sigev_thread; } _sigev_un; } sigevent_t; enum { SIGEV_SIGNAL = 0, SIGEV_NONE, SIGEV_THREAD, SIGEV_THREAD_ID = 4 }; #line 213 "/usr/include/signal.h" extern int sigemptyset (sigset_t *__set) ; extern int sigfillset (sigset_t *__set) ; extern int sigaddset (sigset_t *__set, int __signo) ; extern int sigdelset (sigset_t *__set, int __signo) ; extern int sigismember (const sigset_t *__set, int __signo) ; #line 243 "/usr/include/signal.h" #line 1 "/usr/include/bits/sigaction.h" struct sigaction { union { __sighandler_t sa_handler; void (*sa_sigaction) (int, siginfo_t *, void *); } __sigaction_handler; __sigset_t sa_mask; unsigned long sa_flags; void (*sa_restorer) (void); }; #line 66 "/usr/include/bits/sigaction.h" #line 247 "/usr/include/signal.h" extern int sigprocmask (int __how, const sigset_t * __set, sigset_t * __oset) ; extern int sigsuspend (const sigset_t *__set) ; extern int sigaction (int __sig, const struct sigaction * __act, struct sigaction * __oact) ; extern int sigpending (sigset_t *__set) ; extern int sigwait (const sigset_t * __set, int * __sig) ; extern int sigwaitinfo (const sigset_t * __set, siginfo_t * __info) ; extern int sigtimedwait (const sigset_t * __set, siginfo_t * __info, const struct timespec * __timeout) ; extern int sigqueue (__pid_t __pid, int __sig, const union sigval __val) ; extern const char *const _sys_siglist[65]; extern const char *const sys_siglist[65]; struct sigvec { __sighandler_t sv_handler; int sv_mask; int sv_flags; }; extern int sigvec (int __sig, const struct sigvec *__vec, struct sigvec *__ovec) ; #line 1 "/usr/include/bits/sigcontext.h" #line 1 "/usr/include/bits/wordsize.h" #line 24 "/usr/include/bits/sigcontext.h" #line 1 "/usr/include/stdint.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/stdint.h" #line 1 "/usr/include/bits/wchar.h" #line 28 "/usr/include/stdint.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/stdint.h" typedef signed char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char uint8_t; typedef unsigned short int uint16_t; typedef unsigned int uint32_t; typedef unsigned long int uint64_t; typedef signed char int_least8_t; typedef short int int_least16_t; typedef int int_least32_t; typedef long int int_least64_t; typedef unsigned char uint_least8_t; typedef unsigned short int uint_least16_t; typedef unsigned int uint_least32_t; typedef unsigned long int uint_least64_t; typedef signed char int_fast8_t; typedef long int int_fast16_t; typedef long int int_fast32_t; typedef long int int_fast64_t; #line 102 "/usr/include/stdint.h" typedef unsigned char uint_fast8_t; typedef unsigned long int uint_fast16_t; typedef unsigned long int uint_fast32_t; typedef unsigned long int uint_fast64_t; #line 115 "/usr/include/stdint.h" typedef long int intptr_t; typedef unsigned long int uintptr_t; #line 131 "/usr/include/stdint.h" typedef long int intmax_t; typedef unsigned long int uintmax_t; #line 143 "/usr/include/stdint.h" #line 156 "/usr/include/stdint.h" #line 205 "/usr/include/stdint.h" #line 215 "/usr/include/stdint.h" #line 226 "/usr/include/stdint.h" #line 238 "/usr/include/stdint.h" #line 259 "/usr/include/stdint.h" #line 298 "/usr/include/stdint.h" #line 308 "/usr/include/stdint.h" #line 317 "/usr/include/stdint.h" #line 25 "/usr/include/bits/sigcontext.h" #line 48 "/usr/include/bits/sigcontext.h" typedef struct { unsigned int si_float_regs [64]; unsigned long si_fsr; unsigned long si_gsr; unsigned long si_fprs; uint64_t si_xglob_regs[32]; uint32_t si_xfloat_regs[448]; uint64_t si_xasr; } __siginfo_fpu_t; struct sigcontext { char sigc_info[128]; struct { unsigned long u_regs[16]; unsigned long tstate; unsigned long tpc; unsigned long tnpc; unsigned int y; unsigned int fprs; } sigc_regs; __siginfo_fpu_t * sigc_fpu_save; uint64_t si_txar; uint64_t si_sccr; struct { void * ss_sp; int ss_flags; unsigned long ss_size; } sigc_stack; unsigned long sigc_mask; }; #line 334 "/usr/include/signal.h" extern int sigreturn (struct sigcontext *__scp) ; #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 344 "/usr/include/signal.h" extern int siginterrupt (int __sig, int __interrupt) ; #line 1 "/usr/include/bits/sigstack.h" struct sigstack { void *ss_sp; int ss_onstack; }; enum { SS_ONSTACK = 1, SS_DISABLE }; typedef struct sigaltstack { void *ss_sp; int ss_flags; size_t ss_size; } stack_t; #line 351 "/usr/include/signal.h" extern int sigstack (struct sigstack *__ss, struct sigstack *__oss) ; extern int sigaltstack (const struct sigaltstack * __ss, struct sigaltstack * __oss) ; #line 384 "/usr/include/signal.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 389 "/usr/include/signal.h" #line 1 "/usr/include/bits/sigthread.h" extern int pthread_sigmask (int __how, const __sigset_t * __newmask, __sigset_t * __oldmask); extern int pthread_kill (pthread_t __threadid, int __signo) ; #line 390 "/usr/include/signal.h" extern int __libc_current_sigrtmin (void) ; extern int __libc_current_sigrtmax (void) ; #line 32 "/usr/include/sys/wait.h" #line 1 "/usr/include/sys/resource.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/sys/resource.h" #line 1 "/usr/include/bits/resource.h" enum __rlimit_resource { RLIMIT_CPU = 0, RLIMIT_FSIZE = 1, RLIMIT_DATA = 2, RLIMIT_STACK = 3, RLIMIT_CORE = 4, __RLIMIT_RSS = 5, RLIMIT_NOFILE = 6, __RLIMIT_OFILE = RLIMIT_NOFILE, RLIMIT_AS = 9, __RLIMIT_NPROC = 7, __RLIMIT_MEMLOCK = 8, __RLIMIT_LOCKS = 10, __RLIMIT_SIGPENDING = 11, __RLIMIT_MSGQUEUE = 12, __RLIMIT_NICE = 13, __RLIMIT_RTPRIO = 14, __RLIMIT_NLIMITS = 15, __RLIM_NLIMITS = __RLIMIT_NLIMITS }; #line 135 "/usr/include/bits/resource.h" typedef __rlim_t rlim_t; #line 150 "/usr/include/bits/resource.h" struct rlimit { rlim_t rlim_cur; rlim_t rlim_max; }; #line 168 "/usr/include/bits/resource.h" enum __rusage_who { RUSAGE_SELF = 0, RUSAGE_CHILDREN = -1 }; #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 183 "/usr/include/bits/resource.h" struct rusage { struct timeval ru_utime; struct timeval ru_stime; long int ru_maxrss; long int ru_ixrss; long int ru_idrss; long int ru_isrss; long int ru_minflt; long int ru_majflt; long int ru_nswap; long int ru_inblock; long int ru_oublock; long int ru_msgsnd; long int ru_msgrcv; long int ru_nsignals; long int ru_nvcsw; long int ru_nivcsw; }; enum __priority_which { PRIO_PROCESS = 0, PRIO_PGRP = 1, PRIO_USER = 2 }; #line 26 "/usr/include/sys/resource.h" typedef __id_t id_t; typedef int __rlimit_resource_t; typedef int __rusage_who_t; typedef int __priority_which_t; extern int getrlimit (__rlimit_resource_t __resource, struct rlimit *__rlimits) ; #line 65 "/usr/include/sys/resource.h" extern int setrlimit (__rlimit_resource_t __resource, const struct rlimit *__rlimits) ; #line 85 "/usr/include/sys/resource.h" extern int getrusage (__rusage_who_t __who, struct rusage *__usage) ; extern int getpriority (__priority_which_t __which, id_t __who) ; extern int setpriority (__priority_which_t __which, id_t __who, int __prio) ; #line 33 "/usr/include/sys/wait.h" #line 1 "/usr/include/bits/waitflags.h" #line 39 "/usr/include/sys/wait.h" #line 52 "/usr/include/sys/wait.h" #line 70 "/usr/include/sys/wait.h" #line 78 "/usr/include/sys/wait.h" #line 1 "/usr/include/bits/waitstatus.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 66 "/usr/include/bits/waitstatus.h" union wait { int w_status; struct { #line 79 "/usr/include/bits/waitstatus.h" unsigned int:16; unsigned int __w_retcode:8; unsigned int __w_coredump:1; unsigned int __w_termsig:7; } __wait_terminated; struct { #line 93 "/usr/include/bits/waitstatus.h" unsigned int:16; unsigned int __w_stopsig:8; unsigned int __w_stopval:8; } __wait_stopped; }; #line 81 "/usr/include/sys/wait.h" #line 92 "/usr/include/sys/wait.h" #line 99 "/usr/include/sys/wait.h" typedef enum { P_ALL, P_PID, P_PGID } idtype_t; extern __pid_t wait (void * __stat_loc); extern __pid_t waitpid (__pid_t __pid, int *__stat_loc, int __options); #line 1 "/usr/include/bits/siginfo.h" #line 1 "/usr/include/bits/wordsize.h" #line 26 "/usr/include/bits/siginfo.h" #line 39 "/usr/include/bits/siginfo.h" #line 268 "/usr/include/bits/siginfo.h" #line 144 "/usr/include/sys/wait.h" extern int waitid (idtype_t __idtype, __id_t __id, siginfo_t *__infop, int __options); struct rusage; extern __pid_t wait3 (void * __stat_loc, int __options, struct rusage * __usage) ; extern __pid_t wait4 (__pid_t __pid, void * __stat_loc, int __options, struct rusage *__usage) ; #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_WAIT_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: stdlib.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/stdlib.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/stdlib.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef int wchar_t; #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 34 "/usr/include/stdlib.h" #line 95 "/usr/include/stdlib.h" typedef struct { int quot; int rem; } div_t; typedef struct { long int quot; long int rem; } ldiv_t; typedef struct { long long int quot; long long int rem; } lldiv_t; extern size_t __ctype_get_mb_cur_max (void) ; extern double atof (const char *__nptr) ; extern int atoi (const char *__nptr) ; extern long int atol (const char *__nptr) ; extern long long int atoll (const char *__nptr) ; extern double strtod (const char * __nptr, char ** __endptr) ; extern float strtof (const char * __nptr, char ** __endptr) ; extern long double strtold (const char * __nptr, char ** __endptr) ; extern long int strtol (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long int strtoul (const char * __nptr, char ** __endptr, int __base) ; extern long long int strtoq (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long long int strtouq (const char * __nptr, char ** __endptr, int __base) ; extern long long int strtoll (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long long int strtoull (const char * __nptr, char ** __endptr, int __base) ; #line 274 "/usr/include/stdlib.h" #line 305 "/usr/include/stdlib.h" extern char *l64a (long int __n) ; extern long int a64l (const char *__s) ; #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; typedef char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 321 "/usr/include/stdlib.h" extern long int random (void) ; extern void srandom (unsigned int __seed) ; extern char *initstate (unsigned int __seed, char *__statebuf, size_t __statelen) ; extern char *setstate (char *__statebuf) ; struct random_data { int32_t *fptr; int32_t *rptr; int32_t *state; int rand_type; int rand_deg; int rand_sep; int32_t *end_ptr; }; extern int random_r (struct random_data * __buf, int32_t * __result) ; extern int srandom_r (unsigned int __seed, struct random_data *__buf) ; extern int initstate_r (unsigned int __seed, char * __statebuf, size_t __statelen, struct random_data * __buf) ; extern int setstate_r (char * __statebuf, struct random_data * __buf) ; extern int rand (void) ; extern void srand (unsigned int __seed) ; extern int rand_r (unsigned int *__seed) ; extern double drand48 (void) ; extern double erand48 (unsigned short int __xsubi[3]) ; extern long int lrand48 (void) ; extern long int nrand48 (unsigned short int __xsubi[3]) ; extern long int mrand48 (void) ; extern long int jrand48 (unsigned short int __xsubi[3]) ; extern void srand48 (long int __seedval) ; extern unsigned short int *seed48 (unsigned short int __seed16v[3]) ; extern void lcong48 (unsigned short int __param[7]) ; struct drand48_data { unsigned short int __x[3]; unsigned short int __old_x[3]; unsigned short int __c; unsigned short int __init; unsigned long long int __a; }; extern int drand48_r (struct drand48_data * __buffer, double * __result) ; extern int erand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, double * __result) ; extern int lrand48_r (struct drand48_data * __buffer, long int * __result) ; extern int nrand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, long int * __result) ; extern int mrand48_r (struct drand48_data * __buffer, long int * __result) ; extern int jrand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, long int * __result) ; extern int srand48_r (long int __seedval, struct drand48_data *__buffer) ; extern int seed48_r (unsigned short int __seed16v[3], struct drand48_data *__buffer) ; extern int lcong48_r (unsigned short int __param[7], struct drand48_data *__buffer) ; extern void *malloc (size_t __size) ; extern void *calloc (size_t __nmemb, size_t __size) ; extern void *realloc (void *__ptr, size_t __size) ; extern void free (void *__ptr) ; extern void cfree (void *__ptr) ; #line 1 "/usr/include/alloca.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/alloca.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 26 "/usr/include/alloca.h" extern void *alloca (size_t __size) ; #line 498 "/usr/include/stdlib.h" extern void *valloc (size_t __size) ; extern int posix_memalign (void **__memptr, size_t __alignment, size_t __size) ; extern void abort (void) ; extern int atexit (void (*__func) (void)) ; extern int on_exit (void (*__func) (int __status, void *__arg), void *__arg) ; extern void exit (int __status) ; extern void _Exit (int __status) ; extern char *getenv (const char *__name) ; extern char *__secure_getenv (const char *__name) ; extern int putenv (char *__string) ; extern int setenv (const char *__name, const char *__value, int __replace) ; extern int unsetenv (const char *__name) ; extern int clearenv (void) ; extern char *mktemp (char *__template) ; extern int mkstemp (char *__template) ; #line 607 "/usr/include/stdlib.h" extern char *mkdtemp (char *__template) ; #line 638 "/usr/include/stdlib.h" extern int system (const char *__command) ; #line 655 "/usr/include/stdlib.h" extern char *realpath (const char * __name, char * __resolved) ; typedef int (*__compar_fn_t) (const void *, const void *); extern void *bsearch (const void *__key, const void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; extern void qsort (void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; extern int abs (int __x) ; extern long int labs (long int __x) ; extern long long int llabs (long long int __x) ; extern div_t div (int __numer, int __denom) ; extern ldiv_t ldiv (long int __numer, long int __denom) ; extern lldiv_t lldiv (long long int __numer, long long int __denom) ; extern char *ecvt (double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *fcvt (double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *gcvt (double __value, int __ndigit, char *__buf) ; extern char *qecvt (long double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *qfcvt (long double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *qgcvt (long double __value, int __ndigit, char *__buf) ; extern int ecvt_r (double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int fcvt_r (double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int qecvt_r (long double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int qfcvt_r (long double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int mblen (const char *__s, size_t __n) ; extern int mbtowc (wchar_t * __pwc, const char * __s, size_t __n) ; extern int wctomb (char *__s, wchar_t __wchar) ; extern size_t mbstowcs (wchar_t * __pwcs, const char * __s, size_t __n) ; extern size_t wcstombs (char * __s, const wchar_t * __pwcs, size_t __n) ; extern int rpmatch (const char *__response) ; #line 820 "/usr/include/stdlib.h" extern int posix_openpt (int __oflag) ; #line 851 "/usr/include/stdlib.h" #line 862 "/usr/include/stdlib.h" extern int getloadavg (double __loadavg[], int __nelem) ; #line 879 "/usr/include/stdlib.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_STDLIB_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: pthread.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/pthread.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 24 "/usr/include/pthread.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 25 "/usr/include/pthread.h" #line 1 "/usr/include/sched.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 24 "/usr/include/sched.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 27 "/usr/include/sched.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 30 "/usr/include/sched.h" #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 33 "/usr/include/sched.h" #line 1 "/usr/include/bits/sched.h" #line 36 "/usr/include/bits/sched.h" #line 64 "/usr/include/bits/sched.h" struct sched_param { int __sched_priority; }; extern int clone (int (*__fn) (void *__arg), void *__child_stack, int __flags, void *__arg, ...) ; extern int unshare (int __flags) ; extern int sched_getcpu (void) ; struct __sched_param { int __sched_priority; }; typedef unsigned long int __cpu_mask; typedef struct { __cpu_mask __bits[1024 / (8 * sizeof (__cpu_mask))]; } cpu_set_t; #line 146 "/usr/include/bits/sched.h" #line 164 "/usr/include/bits/sched.h" #line 174 "/usr/include/bits/sched.h" extern int __sched_cpucount (size_t __setsize, const cpu_set_t *__setp) ; extern cpu_set_t *__sched_cpualloc (size_t __count) ; extern void __sched_cpufree (cpu_set_t *__set) ; #line 36 "/usr/include/sched.h" extern int sched_setparam (__pid_t __pid, const struct sched_param *__param) ; extern int sched_getparam (__pid_t __pid, struct sched_param *__param) ; extern int sched_setscheduler (__pid_t __pid, int __policy, const struct sched_param *__param) ; extern int sched_getscheduler (__pid_t __pid) ; extern int sched_yield (void) ; extern int sched_get_priority_max (int __algorithm) ; extern int sched_get_priority_min (int __algorithm) ; extern int sched_rr_get_interval (__pid_t __pid, struct timespec *__t) ; #line 117 "/usr/include/sched.h" #line 26 "/usr/include/pthread.h" #line 1 "/usr/include/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 30 "/usr/include/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 40 "/usr/include/time.h" #line 1 "/usr/include/bits/time.h" #line 43 "/usr/include/bits/time.h" #line 44 "/usr/include/time.h" typedef __clock_t clock_t; typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" struct tm { int tm_sec; int tm_min; int tm_hour; int tm_mday; int tm_mon; int tm_year; int tm_wday; int tm_yday; int tm_isdst; long int tm_gmtoff; const char *tm_zone; }; struct itimerspec { struct timespec it_interval; struct timespec it_value; }; struct sigevent; typedef __pid_t pid_t; extern clock_t clock (void) ; extern time_t time (time_t *__timer) ; extern double difftime (time_t __time1, time_t __time0) ; extern time_t mktime (struct tm *__tp) ; extern size_t strftime (char * __s, size_t __maxsize, const char * __format, const struct tm * __tp) ; #line 212 "/usr/include/time.h" #line 227 "/usr/include/time.h" extern struct tm *gmtime (const time_t *__timer) ; extern struct tm *localtime (const time_t *__timer) ; extern struct tm *gmtime_r (const time_t * __timer, struct tm * __tp) ; extern struct tm *localtime_r (const time_t * __timer, struct tm * __tp) ; extern char *asctime (const struct tm *__tp) ; extern char *ctime (const time_t *__timer) ; extern char *asctime_r (const struct tm * __tp, char * __buf) ; extern char *ctime_r (const time_t * __timer, char * __buf) ; extern char *__tzname[2]; extern int __daylight; extern long int __timezone; extern char *tzname[2]; extern void tzset (void) ; extern int daylight; extern long int timezone; extern int stime (const time_t *__when) ; extern time_t timegm (struct tm *__tp) ; extern time_t timelocal (struct tm *__tp) ; extern int dysize (int __year) ; extern int nanosleep (const struct timespec *__requested_time, struct timespec *__remaining); extern int clock_getres (clockid_t __clock_id, struct timespec *__res) ; extern int clock_gettime (clockid_t __clock_id, struct timespec *__tp) ; extern int clock_settime (clockid_t __clock_id, const struct timespec *__tp) ; extern int clock_nanosleep (clockid_t __clock_id, int __flags, const struct timespec *__req, struct timespec *__rem); extern int clock_getcpuclockid (pid_t __pid, clockid_t *__clock_id) ; extern int timer_create (clockid_t __clock_id, struct sigevent * __evp, timer_t * __timerid) ; extern int timer_delete (timer_t __timerid) ; extern int timer_settime (timer_t __timerid, int __flags, const struct itimerspec * __value, struct itimerspec * __ovalue) ; extern int timer_gettime (timer_t __timerid, struct itimerspec *__value) ; extern int timer_getoverrun (timer_t __timerid) ; #line 400 "/usr/include/time.h" #line 415 "/usr/include/time.h" #line 27 "/usr/include/pthread.h" #line 1 "/usr/include/signal.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 30 "/usr/include/signal.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 34 "/usr/include/signal.h" #line 46 "/usr/include/signal.h" typedef __sigset_t sigset_t; #line 401 "/usr/include/signal.h" #line 30 "/usr/include/pthread.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 31 "/usr/include/pthread.h" #line 1 "/usr/include/bits/setjmp.h" #line 1 "/usr/include/bits/wordsize.h" #line 28 "/usr/include/bits/setjmp.h" typedef struct __sparc64_jmp_buf { struct __sparc64_jmp_buf *uc_link; unsigned long uc_flags; unsigned long uc_sigmask; struct __sparc64_jmp_buf_mcontext { unsigned long mc_gregs[53]; unsigned long mc_fp; unsigned long mc_i7; struct __sparc64_jmp_buf_fpu { union { unsigned int sregs[512]; unsigned long dregs[256]; long double qregs[128]; } mcfpu_fpregs; unsigned long mcfpu_fsr; unsigned long mcfpu_fprs; unsigned long mcfpu_gsr; unsigned long mcfpu_xasr; void *mcfpu_fq; unsigned char mcfpu_qcnt; unsigned char mcfpu_qentsz; unsigned char mcfpu_enab; } mc_fpregs; } uc_mcontext; } __jmp_buf[1]; #line 70 "/usr/include/bits/setjmp.h" #line 32 "/usr/include/pthread.h" #line 1 "/usr/include/bits/wordsize.h" #line 33 "/usr/include/pthread.h" enum { PTHREAD_CREATE_JOINABLE, PTHREAD_CREATE_DETACHED }; enum { PTHREAD_MUTEX_TIMED_NP, PTHREAD_MUTEX_RECURSIVE_NP, PTHREAD_MUTEX_ERRORCHECK_NP, PTHREAD_MUTEX_ADAPTIVE_NP #line 63 "/usr/include/pthread.h" }; #line 74 "/usr/include/pthread.h" #line 85 "/usr/include/pthread.h" #line 111 "/usr/include/pthread.h" enum { PTHREAD_RWLOCK_PREFER_READER_NP, PTHREAD_RWLOCK_PREFER_WRITER_NP, PTHREAD_RWLOCK_PREFER_WRITER_NONRECURSIVE_NP, PTHREAD_RWLOCK_DEFAULT_NP = PTHREAD_RWLOCK_PREFER_READER_NP }; #line 144 "/usr/include/pthread.h" enum { PTHREAD_INHERIT_SCHED, PTHREAD_EXPLICIT_SCHED }; enum { PTHREAD_SCOPE_SYSTEM, PTHREAD_SCOPE_PROCESS }; enum { PTHREAD_PROCESS_PRIVATE, PTHREAD_PROCESS_SHARED }; struct _pthread_cleanup_buffer { void (*__routine) (void *); void *__arg; int __canceltype; struct _pthread_cleanup_buffer *__prev; }; enum { PTHREAD_CANCEL_ENABLE, PTHREAD_CANCEL_DISABLE }; enum { PTHREAD_CANCEL_DEFERRED, PTHREAD_CANCEL_ASYNCHRONOUS }; extern int pthread_create (pthread_t * __newthread, const pthread_attr_t * __attr, void *(*__start_routine) (void *), void * __arg) ; extern void pthread_exit (void *__retval) ; extern int pthread_join (pthread_t __th, void **__thread_return); #line 258 "/usr/include/pthread.h" extern int pthread_detach (pthread_t __th) ; extern pthread_t pthread_self (void) ; extern int pthread_equal (pthread_t __thread1, pthread_t __thread2) ; extern int pthread_attr_init (pthread_attr_t *__attr) ; extern int pthread_attr_destroy (pthread_attr_t *__attr) ; extern int pthread_attr_getdetachstate (const pthread_attr_t *__attr, int *__detachstate) ; extern int pthread_attr_setdetachstate (pthread_attr_t *__attr, int __detachstate) ; extern int pthread_attr_getguardsize (const pthread_attr_t *__attr, size_t *__guardsize) ; extern int pthread_attr_setguardsize (pthread_attr_t *__attr, size_t __guardsize) ; extern int pthread_attr_getschedparam (const pthread_attr_t * __attr, struct sched_param * __param) ; extern int pthread_attr_setschedparam (pthread_attr_t * __attr, const struct sched_param * __param) ; extern int pthread_attr_getschedpolicy (const pthread_attr_t * __attr, int * __policy) ; extern int pthread_attr_setschedpolicy (pthread_attr_t *__attr, int __policy) ; extern int pthread_attr_getinheritsched (const pthread_attr_t * __attr, int * __inherit) ; extern int pthread_attr_setinheritsched (pthread_attr_t *__attr, int __inherit) ; extern int pthread_attr_getscope (const pthread_attr_t * __attr, int * __scope) ; extern int pthread_attr_setscope (pthread_attr_t *__attr, int __scope) ; extern int pthread_attr_getstackaddr (const pthread_attr_t * __attr, void ** __stackaddr) ; extern int pthread_attr_setstackaddr (pthread_attr_t *__attr, void *__stackaddr) ; extern int pthread_attr_getstacksize (const pthread_attr_t * __attr, size_t * __stacksize) ; extern int pthread_attr_setstacksize (pthread_attr_t *__attr, size_t __stacksize) ; extern int pthread_attr_getstack (const pthread_attr_t * __attr, void ** __stackaddr, size_t * __stacksize) ; extern int pthread_attr_setstack (pthread_attr_t *__attr, void *__stackaddr, size_t __stacksize) ; #line 407 "/usr/include/pthread.h" extern int pthread_setschedparam (pthread_t __target_thread, int __policy, const struct sched_param *__param) ; extern int pthread_getschedparam (pthread_t __target_thread, int * __policy, struct sched_param * __param) ; extern int pthread_setschedprio (pthread_t __target_thread, int __prio) ; #line 435 "/usr/include/pthread.h" #line 455 "/usr/include/pthread.h" extern int pthread_once (pthread_once_t *__once_control, void (*__init_routine) (void)) ; extern int pthread_setcancelstate (int __state, int *__oldstate); extern int pthread_setcanceltype (int __type, int *__oldtype); extern int pthread_cancel (pthread_t __th); extern void pthread_testcancel (void); typedef struct { struct { __jmp_buf __cancel_jmp_buf; int __mask_was_saved; } __cancel_jmp_buf[1]; void *__pad[4]; } __pthread_unwind_buf_t ; struct __pthread_cleanup_frame { void (*__cancel_routine) (void *); void *__cancel_arg; int __do_it; int __cancel_type; }; #line 629 "/usr/include/pthread.h" #line 652 "/usr/include/pthread.h" extern void __pthread_register_cancel (__pthread_unwind_buf_t *__buf) ; #line 663 "/usr/include/pthread.h" extern void __pthread_unregister_cancel (__pthread_unwind_buf_t *__buf) ; #line 701 "/usr/include/pthread.h" extern void __pthread_unwind_next (__pthread_unwind_buf_t *__buf) ; struct __jmp_buf_tag; extern int __sigsetjmp (struct __jmp_buf_tag *__env, int __savemask) ; extern int pthread_mutex_init (pthread_mutex_t *__mutex, const pthread_mutexattr_t *__mutexattr) ; extern int pthread_mutex_destroy (pthread_mutex_t *__mutex) ; extern int pthread_mutex_trylock (pthread_mutex_t *__mutex) ; extern int pthread_mutex_lock (pthread_mutex_t *__mutex) ; extern int pthread_mutex_timedlock (pthread_mutex_t * __mutex, const struct timespec * __abstime) ; extern int pthread_mutex_unlock (pthread_mutex_t *__mutex) ; #line 761 "/usr/include/pthread.h" extern int pthread_mutexattr_init (pthread_mutexattr_t *__attr) ; extern int pthread_mutexattr_destroy (pthread_mutexattr_t *__attr) ; extern int pthread_mutexattr_getpshared (const pthread_mutexattr_t * __attr, int * __pshared) ; extern int pthread_mutexattr_setpshared (pthread_mutexattr_t *__attr, int __pshared) ; #line 827 "/usr/include/pthread.h" #line 839 "/usr/include/pthread.h" extern int pthread_rwlock_init (pthread_rwlock_t * __rwlock, const pthread_rwlockattr_t * __attr) ; extern int pthread_rwlock_destroy (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlock_rdlock (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlock_tryrdlock (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlock_timedrdlock (pthread_rwlock_t * __rwlock, const struct timespec * __abstime) ; extern int pthread_rwlock_wrlock (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlock_trywrlock (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlock_timedwrlock (pthread_rwlock_t * __rwlock, const struct timespec * __abstime) ; extern int pthread_rwlock_unlock (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlockattr_init (pthread_rwlockattr_t *__attr) ; extern int pthread_rwlockattr_destroy (pthread_rwlockattr_t *__attr) ; extern int pthread_rwlockattr_getpshared (const pthread_rwlockattr_t * __attr, int * __pshared) ; extern int pthread_rwlockattr_setpshared (pthread_rwlockattr_t *__attr, int __pshared) ; extern int pthread_rwlockattr_getkind_np (const pthread_rwlockattr_t * __attr, int * __pref) ; extern int pthread_rwlockattr_setkind_np (pthread_rwlockattr_t *__attr, int __pref) ; extern int pthread_cond_init (pthread_cond_t * __cond, const pthread_condattr_t * __cond_attr) ; extern int pthread_cond_destroy (pthread_cond_t *__cond) ; extern int pthread_cond_signal (pthread_cond_t *__cond) ; extern int pthread_cond_broadcast (pthread_cond_t *__cond) ; extern int pthread_cond_wait (pthread_cond_t * __cond, pthread_mutex_t * __mutex) ; extern int pthread_cond_timedwait (pthread_cond_t * __cond, pthread_mutex_t * __mutex, const struct timespec * __abstime) ; extern int pthread_condattr_init (pthread_condattr_t *__attr) ; extern int pthread_condattr_destroy (pthread_condattr_t *__attr) ; extern int pthread_condattr_getpshared (const pthread_condattr_t * __attr, int * __pshared) ; extern int pthread_condattr_setpshared (pthread_condattr_t *__attr, int __pshared) ; extern int pthread_condattr_getclock (const pthread_condattr_t * __attr, __clockid_t * __clock_id) ; extern int pthread_condattr_setclock (pthread_condattr_t *__attr, __clockid_t __clock_id) ; extern int pthread_spin_init (pthread_spinlock_t *__lock, int __pshared) ; extern int pthread_spin_destroy (pthread_spinlock_t *__lock) ; extern int pthread_spin_lock (pthread_spinlock_t *__lock) ; extern int pthread_spin_trylock (pthread_spinlock_t *__lock) ; extern int pthread_spin_unlock (pthread_spinlock_t *__lock) ; extern int pthread_barrier_init (pthread_barrier_t * __barrier, const pthread_barrierattr_t * __attr, unsigned int __count) ; extern int pthread_barrier_destroy (pthread_barrier_t *__barrier) ; extern int pthread_barrier_wait (pthread_barrier_t *__barrier) ; extern int pthread_barrierattr_init (pthread_barrierattr_t *__attr) ; extern int pthread_barrierattr_destroy (pthread_barrierattr_t *__attr) ; extern int pthread_barrierattr_getpshared (const pthread_barrierattr_t * __attr, int * __pshared) ; extern int pthread_barrierattr_setpshared (pthread_barrierattr_t *__attr, int __pshared) ; extern int pthread_key_create (pthread_key_t *__key, void (*__destr_function) (void *)) ; extern int pthread_key_delete (pthread_key_t __key) ; extern void *pthread_getspecific (pthread_key_t __key) ; extern int pthread_setspecific (pthread_key_t __key, const void *__pointer) ; extern int pthread_getcpuclockid (pthread_t __thread_id, __clockid_t *__clock_id) ; extern int pthread_atfork (void (*__prepare) (void), void (*__parent) (void), void (*__child) (void)) ; #line 1116 "/usr/include/pthread.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_PTHREAD_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: setjmp.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/setjmp.h" #line 1 "/usr/include/setjmp.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/setjmp.h" #line 1 "/usr/include/bits/setjmp.h" #line 1 "/usr/include/bits/wordsize.h" #line 28 "/usr/include/bits/setjmp.h" typedef struct __sparc64_jmp_buf { struct __sparc64_jmp_buf *uc_link; unsigned long uc_flags; unsigned long uc_sigmask; struct __sparc64_jmp_buf_mcontext { unsigned long mc_gregs[53]; unsigned long mc_fp; unsigned long mc_i7; struct __sparc64_jmp_buf_fpu { union { unsigned int sregs[512]; unsigned long dregs[256]; long double qregs[128]; } mcfpu_fpregs; unsigned long mcfpu_fsr; unsigned long mcfpu_fprs; unsigned long mcfpu_gsr; unsigned long mcfpu_xasr; void *mcfpu_fq; unsigned char mcfpu_qcnt; unsigned char mcfpu_qentsz; unsigned char mcfpu_enab; } mc_fpregs; } uc_mcontext; } __jmp_buf[1]; #line 70 "/usr/include/bits/setjmp.h" #line 31 "/usr/include/setjmp.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 32 "/usr/include/setjmp.h" struct __jmp_buf_tag { __jmp_buf __jmpbuf; int __mask_was_saved; __sigset_t __saved_mask; }; typedef struct __jmp_buf_tag jmp_buf[1]; extern int setjmp (jmp_buf __env) ; extern int __sigsetjmp (struct __jmp_buf_tag __env[1], int __savemask) ; extern int _setjmp (struct __jmp_buf_tag __env[1]) ; #line 76 "/usr/include/setjmp.h" extern void longjmp (struct __jmp_buf_tag __env[1], int __val) ; extern void _longjmp (struct __jmp_buf_tag __env[1], int __val) ; typedef struct __jmp_buf_tag sigjmp_buf[1]; extern void siglongjmp (sigjmp_buf __env, int __val) ; #line 3 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/setjmp.h" #pragma unknown_control_flow(setjmp) #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(sigsetjmp) #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SETJMP_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/utsname.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/sys/utsname.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/sys/utsname.h" #line 1 "/usr/include/bits/utsname.h" #line 31 "/usr/include/sys/utsname.h" #line 47 "/usr/include/sys/utsname.h" struct utsname { char sysname[65]; char nodename[65]; char release[65]; char version[65]; char machine[65]; char __domainname[65]; }; extern int uname (struct utsname *__name) ; #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_UTSNAME_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: machine/endian.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "machine/endian.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "machine/endian.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "machine/endian.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c".: ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: limits.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 7 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "/usr/include/bits/posix1_lim.h" #line 1 "/usr/include/bits/local_lim.h" #line 34 "/usr/include/bits/local_lim.h" #line 1 "/usr/include/linux/limits.h" #line 17 "/usr/include/linux/limits.h" #line 37 "/usr/include/bits/local_lim.h" #line 154 "/usr/include/bits/posix1_lim.h" #line 62 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "/usr/include/bits/posix2_lim.h" #line 87 "/usr/include/bits/posix2_lim.h" #line 66 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_LIMITS_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: fcntl.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/fcntl.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/fcntl.h" #line 1 "/usr/include/bits/fcntl.h" #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; typedef char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 26 "/usr/include/bits/fcntl.h" #line 1 "/usr/include/bits/wordsize.h" #line 27 "/usr/include/bits/fcntl.h" #line 46 "/usr/include/bits/fcntl.h" #line 54 "/usr/include/bits/fcntl.h" #line 62 "/usr/include/bits/fcntl.h" #line 98 "/usr/include/bits/fcntl.h" #line 111 "/usr/include/bits/fcntl.h" #line 121 "/usr/include/bits/fcntl.h" #line 142 "/usr/include/bits/fcntl.h" #line 149 "/usr/include/bits/fcntl.h" #line 160 "/usr/include/bits/fcntl.h" struct flock { short int l_type; short int l_whence; __off_t l_start; __off_t l_len; __pid_t l_pid; short int __unused; }; #line 187 "/usr/include/bits/fcntl.h" #line 197 "/usr/include/bits/fcntl.h" #line 207 "/usr/include/bits/fcntl.h" #line 229 "/usr/include/bits/fcntl.h" #line 258 "/usr/include/bits/fcntl.h" #line 35 "/usr/include/fcntl.h" #line 51 "/usr/include/fcntl.h" #line 70 "/usr/include/fcntl.h" extern int fcntl (int __fd, int __cmd, ...); extern int open (const char *__file, int __oflag, ...) ; #line 97 "/usr/include/fcntl.h" #line 123 "/usr/include/fcntl.h" extern int creat (const char *__file, __mode_t __mode) ; #line 142 "/usr/include/fcntl.h" extern int lockf (int __fd, int __cmd, __off_t __len); #line 171 "/usr/include/fcntl.h" extern int posix_fadvise (int __fd, __off_t __offset, __off_t __len, int __advise) ; #line 191 "/usr/include/fcntl.h" extern int posix_fallocate (int __fd, __off_t __offset, __off_t __len); #line 212 "/usr/include/fcntl.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_FCNTL_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: string.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/string.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/string.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 34 "/usr/include/string.h" extern void *memcpy (void * __dest, const void * __src, size_t __n) ; extern void *memmove (void *__dest, const void *__src, size_t __n) ; extern void *memccpy (void * __dest, const void * __src, int __c, size_t __n) ; extern void *memset (void *__s, int __c, size_t __n) ; extern int memcmp (const void *__s1, const void *__s2, size_t __n) ; extern void *memchr (const void *__s, int __c, size_t __n) ; #line 80 "/usr/include/string.h" extern char *strcpy (char * __dest, const char * __src) ; extern char *strncpy (char * __dest, const char * __src, size_t __n) ; extern char *strcat (char * __dest, const char * __src) ; extern char *strncat (char * __dest, const char * __src, size_t __n) ; extern int strcmp (const char *__s1, const char *__s2) ; extern int strncmp (const char *__s1, const char *__s2, size_t __n) ; extern int strcoll (const char *__s1, const char *__s2) ; extern size_t strxfrm (char * __dest, const char * __src, size_t __n) ; #line 127 "/usr/include/string.h" extern char *strdup (const char *__s) ; #line 164 "/usr/include/string.h" extern char *strchr (const char *__s, int __c) ; extern char *strrchr (const char *__s, int __c) ; #line 180 "/usr/include/string.h" extern size_t strcspn (const char *__s, const char *__reject) ; extern size_t strspn (const char *__s, const char *__accept) ; extern char *strpbrk (const char *__s, const char *__accept) ; extern char *strstr (const char *__haystack, const char *__needle) ; extern char *strtok (char * __s, const char * __delim) ; extern char *__strtok_r (char * __s, const char * __delim, char ** __save_ptr) ; extern char *strtok_r (char * __s, const char * __delim, char ** __save_ptr) ; #line 238 "/usr/include/string.h" extern size_t strlen (const char *__s) ; #line 252 "/usr/include/string.h" extern char *strerror (int __errnum) ; extern int __xpg_strerror_r (int __errnum, char *__buf, size_t __buflen) ; #line 285 "/usr/include/string.h" extern void __bzero (void *__s, size_t __n) ; extern void bcopy (const void *__src, void *__dest, size_t __n) ; extern void bzero (void *__s, size_t __n) ; extern int bcmp (const void *__s1, const void *__s2, size_t __n) ; extern char *index (const char *__s, int __c) ; extern char *rindex (const char *__s, int __c) ; extern int ffs (int __i) ; #line 329 "/usr/include/string.h" extern int strcasecmp (const char *__s1, const char *__s2) ; extern int strncasecmp (const char *__s1, const char *__s2, size_t __n) ; #line 350 "/usr/include/string.h" extern char *strsep (char ** __stringp, const char * __delim) ; #line 396 "/usr/include/string.h" #line 431 "/usr/include/string.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_STRING_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/times.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/sys/times.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/sys/times.h" #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 58 "/usr/include/time.h" typedef __clock_t clock_t; #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 30 "/usr/include/sys/times.h" struct tms { clock_t tms_utime; clock_t tms_stime; clock_t tms_cutime; clock_t tms_cstime; }; extern clock_t times (struct tms *__buffer) ; #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_TIMES_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: io.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "io.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "io.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "io.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c".: ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: stdint.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/stdint.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/stdint.h" #line 1 "/usr/include/bits/wchar.h" #line 28 "/usr/include/stdint.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/stdint.h" typedef signed char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char uint8_t; typedef unsigned short int uint16_t; typedef unsigned int uint32_t; typedef unsigned long int uint64_t; typedef signed char int_least8_t; typedef short int int_least16_t; typedef int int_least32_t; typedef long int int_least64_t; typedef unsigned char uint_least8_t; typedef unsigned short int uint_least16_t; typedef unsigned int uint_least32_t; typedef unsigned long int uint_least64_t; typedef signed char int_fast8_t; typedef long int int_fast16_t; typedef long int int_fast32_t; typedef long int int_fast64_t; #line 102 "/usr/include/stdint.h" typedef unsigned char uint_fast8_t; typedef unsigned long int uint_fast16_t; typedef unsigned long int uint_fast32_t; typedef unsigned long int uint_fast64_t; #line 115 "/usr/include/stdint.h" typedef long int intptr_t; typedef unsigned long int uintptr_t; #line 131 "/usr/include/stdint.h" typedef long int intmax_t; typedef unsigned long int uintmax_t; #line 143 "/usr/include/stdint.h" #line 156 "/usr/include/stdint.h" #line 205 "/usr/include/stdint.h" #line 215 "/usr/include/stdint.h" #line 226 "/usr/include/stdint.h" #line 238 "/usr/include/stdint.h" #line 259 "/usr/include/stdint.h" #line 298 "/usr/include/stdint.h" #line 308 "/usr/include/stdint.h" #line 317 "/usr/include/stdint.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_STDINT_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: pwd.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/pwd.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/pwd.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 31 "/usr/include/pwd.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 34 "/usr/include/pwd.h" typedef __gid_t gid_t; typedef __uid_t uid_t; struct passwd { char *pw_name; char *pw_passwd; __uid_t pw_uid; __gid_t pw_gid; char *pw_gecos; char *pw_dir; char *pw_shell; }; #line 1 "/usr/include/stdio.h" #line 40 "/usr/include/stdio.h" struct _IO_FILE; typedef struct _IO_FILE FILE; #line 70 "/usr/include/stdio.h" #line 917 "/usr/include/stdio.h" #line 65 "/usr/include/pwd.h" extern void setpwent (void); extern void endpwent (void); extern struct passwd *getpwent (void); extern struct passwd *fgetpwent (FILE *__stream); extern int putpwent (const struct passwd * __p, FILE * __f); extern struct passwd *getpwuid (__uid_t __uid); extern struct passwd *getpwnam (const char *__name); extern int getpwent_r (struct passwd * __resultbuf, char * __buffer, size_t __buflen, struct passwd ** __result); extern int getpwuid_r (__uid_t __uid, struct passwd * __resultbuf, char * __buffer, size_t __buflen, struct passwd ** __result); extern int getpwnam_r (const char * __name, struct passwd * __resultbuf, char * __buffer, size_t __buflen, struct passwd ** __result); extern int fgetpwent_r (FILE * __stream, struct passwd * __resultbuf, char * __buffer, size_t __buflen, struct passwd ** __result); #line 183 "/usr/include/pwd.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_PWD_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: float.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/float.h" #line 65 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/float.h" #line 80 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/float.h" #line 91 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/float.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_FLOAT_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/param.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/sys/param.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 7 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "/usr/include/bits/posix1_lim.h" #line 1 "/usr/include/bits/local_lim.h" #line 34 "/usr/include/bits/local_lim.h" #line 1 "/usr/include/linux/limits.h" #line 17 "/usr/include/linux/limits.h" #line 37 "/usr/include/bits/local_lim.h" #line 154 "/usr/include/bits/posix1_lim.h" #line 62 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "/usr/include/bits/posix2_lim.h" #line 87 "/usr/include/bits/posix2_lim.h" #line 66 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 23 "/usr/include/sys/param.h" #line 1 "/usr/include/linux/param.h" #line 1 "/usr/include/asm/param.h" #line 1 "/usr/include/asm-s64fx/param.h" #line 6 "/usr/include/asm/param.h" #line 5 "/usr/include/linux/param.h" #line 25 "/usr/include/sys/param.h" #line 36 "/usr/include/sys/param.h" #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; typedef char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 43 "/usr/include/sys/param.h" #line 62 "/usr/include/sys/param.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_PARAM_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: netdb.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/netdb.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/netdb.h" #line 1 "/usr/include/netinet/in.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 24 "/usr/include/netinet/in.h" #line 1 "/usr/include/stdint.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/stdint.h" #line 1 "/usr/include/bits/wchar.h" #line 28 "/usr/include/stdint.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/stdint.h" typedef signed char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char uint8_t; typedef unsigned short int uint16_t; typedef unsigned int uint32_t; typedef unsigned long int uint64_t; typedef signed char int_least8_t; typedef short int int_least16_t; typedef int int_least32_t; typedef long int int_least64_t; typedef unsigned char uint_least8_t; typedef unsigned short int uint_least16_t; typedef unsigned int uint_least32_t; typedef unsigned long int uint_least64_t; typedef signed char int_fast8_t; typedef long int int_fast16_t; typedef long int int_fast32_t; typedef long int int_fast64_t; #line 102 "/usr/include/stdint.h" typedef unsigned char uint_fast8_t; typedef unsigned long int uint_fast16_t; typedef unsigned long int uint_fast32_t; typedef unsigned long int uint_fast64_t; #line 115 "/usr/include/stdint.h" typedef long int intptr_t; typedef unsigned long int uintptr_t; #line 131 "/usr/include/stdint.h" typedef long int intmax_t; typedef unsigned long int uintmax_t; #line 143 "/usr/include/stdint.h" #line 156 "/usr/include/stdint.h" #line 205 "/usr/include/stdint.h" #line 215 "/usr/include/stdint.h" #line 226 "/usr/include/stdint.h" #line 238 "/usr/include/stdint.h" #line 259 "/usr/include/stdint.h" #line 298 "/usr/include/stdint.h" #line 308 "/usr/include/stdint.h" #line 317 "/usr/include/stdint.h" #line 25 "/usr/include/netinet/in.h" #line 1 "/usr/include/sys/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/socket.h" #line 1 "/usr/include/sys/uio.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/sys/uio.h" #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; #line 172 "/usr/include/sys/types.h" typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 25 "/usr/include/sys/uio.h" #line 1 "/usr/include/bits/uio.h" struct iovec { void *iov_base; size_t iov_len; }; #line 30 "/usr/include/sys/uio.h" extern ssize_t readv (int __fd, const struct iovec *__iovec, int __count); extern ssize_t writev (int __fd, const struct iovec *__iovec, int __count); #line 29 "/usr/include/sys/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 31 "/usr/include/sys/socket.h" #line 1 "/usr/include/bits/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 31 "/usr/include/bits/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 7 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "/usr/include/bits/posix1_lim.h" #line 1 "/usr/include/bits/local_lim.h" #line 34 "/usr/include/bits/local_lim.h" #line 1 "/usr/include/linux/limits.h" #line 17 "/usr/include/linux/limits.h" #line 37 "/usr/include/bits/local_lim.h" #line 154 "/usr/include/bits/posix1_lim.h" #line 62 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "/usr/include/bits/posix2_lim.h" #line 87 "/usr/include/bits/posix2_lim.h" #line 66 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 33 "/usr/include/bits/socket.h" typedef __socklen_t socklen_t; enum __socket_type { SOCK_STREAM = 1, SOCK_DGRAM = 2, SOCK_RAW = 3, SOCK_RDM = 4, SOCK_SEQPACKET = 5, SOCK_PACKET = 10 }; #line 96 "/usr/include/bits/socket.h" #line 130 "/usr/include/bits/socket.h" #line 142 "/usr/include/bits/socket.h" #line 1 "/usr/include/bits/sockaddr.h" typedef unsigned short int sa_family_t; #line 148 "/usr/include/bits/socket.h" struct sockaddr { sa_family_t sa_family; char sa_data[14]; }; #line 166 "/usr/include/bits/socket.h" struct sockaddr_storage { sa_family_t ss_family; __uint64_t __ss_align; char __ss_padding[(128 - (2 * sizeof (__uint64_t)))]; }; enum { MSG_OOB = 0x01, MSG_PEEK = 0x02, MSG_DONTROUTE = 0x04, #line 189 "/usr/include/bits/socket.h" MSG_CTRUNC = 0x08, MSG_PROXY = 0x10, MSG_TRUNC = 0x20, MSG_DONTWAIT = 0x40, MSG_EOR = 0x80, MSG_WAITALL = 0x100, MSG_FIN = 0x200, MSG_SYN = 0x400, MSG_CONFIRM = 0x800, MSG_RST = 0x1000, MSG_ERRQUEUE = 0x2000, MSG_NOSIGNAL = 0x4000, MSG_MORE = 0x8000, MSG_CMSG_CLOEXEC = 0x40000000 }; struct msghdr { void *msg_name; socklen_t msg_namelen; struct iovec *msg_iov; size_t msg_iovlen; void *msg_control; size_t msg_controllen; int msg_flags; }; struct cmsghdr { size_t cmsg_len; int cmsg_level; int cmsg_type; unsigned char __cmsg_data []; }; #line 272 "/usr/include/bits/socket.h" extern struct cmsghdr *__cmsg_nxthdr (struct msghdr *__mhdr, struct cmsghdr *__cmsg) ; #line 297 "/usr/include/bits/socket.h" enum { SCM_RIGHTS = 0x01 , SCM_CREDENTIALS = 0x02 }; struct ucred { pid_t pid; uid_t uid; gid_t gid; }; #line 1 "/usr/include/asm/socket.h" #line 1 "/usr/include/asm-s64fx/socket.h" #line 1 "/usr/include/asm/sockios.h" #line 1 "/usr/include/asm-s64fx/sockios.h" #line 12 "/usr/include/asm-s64fx/sockios.h" #line 6 "/usr/include/asm/sockios.h" #line 6 "/usr/include/asm-s64fx/socket.h" #line 19 "/usr/include/asm-s64fx/socket.h" #line 26 "/usr/include/asm-s64fx/socket.h" #line 36 "/usr/include/asm-s64fx/socket.h" #line 6 "/usr/include/asm/socket.h" #line 321 "/usr/include/bits/socket.h" struct linger { int l_onoff; int l_linger; }; #line 37 "/usr/include/sys/socket.h" struct osockaddr { unsigned short int sa_family; unsigned char sa_data[14]; }; enum { SHUT_RD = 0, SHUT_WR, SHUT_RDWR }; #line 96 "/usr/include/sys/socket.h" extern int socket (int __domain, int __type, int __protocol) ; extern int socketpair (int __domain, int __type, int __protocol, int __fds[2]) ; extern int bind (int __fd, const struct sockaddr * __addr, socklen_t __len) ; extern int getsockname (int __fd, struct sockaddr * __addr, socklen_t * __len) ; extern int connect (int __fd, const struct sockaddr * __addr, socklen_t __len); extern int getpeername (int __fd, struct sockaddr * __addr, socklen_t * __len) ; extern ssize_t send (int __fd, const void *__buf, size_t __n, int __flags); extern ssize_t recv (int __fd, void *__buf, size_t __n, int __flags); extern ssize_t sendto (int __fd, const void *__buf, size_t __n, int __flags, const struct sockaddr * __addr, socklen_t __addr_len); extern ssize_t recvfrom (int __fd, void * __buf, size_t __n, int __flags, struct sockaddr * __addr, socklen_t * __addr_len); extern ssize_t sendmsg (int __fd, const struct msghdr *__message, int __flags); extern ssize_t recvmsg (int __fd, struct msghdr *__message, int __flags); extern int getsockopt (int __fd, int __level, int __optname, void * __optval, socklen_t * __optlen) ; extern int setsockopt (int __fd, int __level, int __optname, const void *__optval, socklen_t __optlen) ; extern int listen (int __fd, int __n) ; extern int accept (int __fd, struct sockaddr * __addr, socklen_t * __addr_len); extern int shutdown (int __fd, int __how) ; extern int sockatmark (int __fd) ; extern int isfdtype (int __fd, int __fdtype) ; #line 26 "/usr/include/netinet/in.h" enum { IPPROTO_IP = 0, IPPROTO_HOPOPTS = 0, IPPROTO_ICMP = 1, IPPROTO_IGMP = 2, IPPROTO_IPIP = 4, IPPROTO_TCP = 6, IPPROTO_EGP = 8, IPPROTO_PUP = 12, IPPROTO_UDP = 17, IPPROTO_IDP = 22, IPPROTO_TP = 29, IPPROTO_IPV6 = 41, IPPROTO_ROUTING = 43, IPPROTO_FRAGMENT = 44, IPPROTO_RSVP = 46, IPPROTO_GRE = 47, IPPROTO_ESP = 50, IPPROTO_AH = 51, IPPROTO_ICMPV6 = 58, IPPROTO_NONE = 59, IPPROTO_DSTOPTS = 60, IPPROTO_MTP = 92, IPPROTO_ENCAP = 98, IPPROTO_PIM = 103, IPPROTO_COMP = 108, IPPROTO_SCTP = 132, IPPROTO_RAW = 255, IPPROTO_MAX }; typedef uint16_t in_port_t; enum { IPPORT_ECHO = 7, IPPORT_DISCARD = 9, IPPORT_SYSTAT = 11, IPPORT_DAYTIME = 13, IPPORT_NETSTAT = 15, IPPORT_FTP = 21, IPPORT_TELNET = 23, IPPORT_SMTP = 25, IPPORT_TIMESERVER = 37, IPPORT_NAMESERVER = 42, IPPORT_WHOIS = 43, IPPORT_MTP = 57, IPPORT_TFTP = 69, IPPORT_RJE = 77, IPPORT_FINGER = 79, IPPORT_TTYLINK = 87, IPPORT_SUPDUP = 95, IPPORT_EXECSERVER = 512, IPPORT_LOGINSERVER = 513, IPPORT_CMDSERVER = 514, IPPORT_EFSSERVER = 520, IPPORT_BIFFUDP = 512, IPPORT_WHOSERVER = 513, IPPORT_ROUTESERVER = 520, IPPORT_RESERVED = 1024, IPPORT_USERRESERVED = 5000 }; typedef uint32_t in_addr_t; struct in_addr { in_addr_t s_addr; }; struct in6_addr { union { uint8_t u6_addr8[16]; uint16_t u6_addr16[8]; uint32_t u6_addr32[4]; } in6_u; }; extern const struct in6_addr in6addr_any; extern const struct in6_addr in6addr_loopback; struct sockaddr_in { sa_family_t sin_family; in_port_t sin_port; struct in_addr sin_addr; unsigned char sin_zero[sizeof (struct sockaddr) - (sizeof (unsigned short int)) - sizeof (in_port_t) - sizeof (struct in_addr)]; }; struct sockaddr_in6 { sa_family_t sin6_family; in_port_t sin6_port; uint32_t sin6_flowinfo; struct in6_addr sin6_addr; uint32_t sin6_scope_id; }; struct ip_mreq { struct in_addr imr_multiaddr; struct in_addr imr_interface; }; struct ip_mreq_source { struct in_addr imr_multiaddr; struct in_addr imr_interface; struct in_addr imr_sourceaddr; }; struct ipv6_mreq { struct in6_addr ipv6mr_multiaddr; unsigned int ipv6mr_interface; }; struct group_req { uint32_t gr_interface; struct sockaddr_storage gr_group; }; struct group_source_req { uint32_t gsr_interface; struct sockaddr_storage gsr_group; struct sockaddr_storage gsr_source; }; struct ip_msfilter { struct in_addr imsf_multiaddr; struct in_addr imsf_interface; uint32_t imsf_fmode; uint32_t imsf_numsrc; struct in_addr imsf_slist[1]; }; struct group_filter { uint32_t gf_interface; struct sockaddr_storage gf_group; uint32_t gf_fmode; uint32_t gf_numsrc; struct sockaddr_storage gf_slist[1]; }; #line 1 "/usr/include/bits/in.h" #line 53 "/usr/include/bits/in.h" #line 65 "/usr/include/bits/in.h" struct ip_opts { struct in_addr ip_dst; char ip_opts[40]; }; struct ip_mreqn { struct in_addr imr_multiaddr; struct in_addr imr_address; int imr_ifindex; }; struct in_pktinfo { int ipi_ifindex; struct in_addr ipi_spec_dst; struct in_addr ipi_addr; }; #line 115 "/usr/include/bits/in.h" #line 135 "/usr/include/bits/in.h" #line 147 "/usr/include/bits/in.h" #line 344 "/usr/include/netinet/in.h" extern uint32_t ntohl (uint32_t __netlong) ; extern uint16_t ntohs (uint16_t __netshort) ; extern uint32_t htonl (uint32_t __hostlong) ; extern uint16_t htons (uint16_t __hostshort) ; #line 1 "/usr/include/bits/byteswap.h" static unsigned short int __bswap_16 (unsigned short int __bsx) { return ((((__bsx) >> 8) & 0xffu) | (((__bsx) & 0xffu) << 8)); } static unsigned int __bswap_32 (unsigned int __bsx) { return ((((__bsx) & 0xff000000u) >> 24) | (((__bsx) & 0x00ff0000u) >> 8) | (((__bsx) & 0x0000ff00u) << 8) | (((__bsx) & 0x000000ffu) << 24)); } #line 86 "/usr/include/bits/byteswap.h" #line 364 "/usr/include/netinet/in.h" #line 385 "/usr/include/netinet/in.h" extern int bindresvport (int __sockfd, struct sockaddr_in *__sock_in) ; extern int bindresvport6 (int __sockfd, struct sockaddr_in6 *__sock_in) ; struct in6_pktinfo { struct in6_addr ipi6_addr; unsigned int ipi6_ifindex; }; struct ip6_mtuinfo { struct sockaddr_in6 ip6m_addr; uint32_t ip6m_mtu; }; #line 548 "/usr/include/netinet/in.h" #line 29 "/usr/include/netdb.h" #line 1 "/usr/include/rpc/netdb.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 40 "/usr/include/rpc/netdb.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 43 "/usr/include/rpc/netdb.h" struct rpcent { char *r_name; char **r_aliases; int r_number; }; extern void setrpcent (int __stayopen) ; extern void endrpcent (void) ; extern struct rpcent *getrpcbyname (const char *__name) ; extern struct rpcent *getrpcbynumber (int __number) ; extern struct rpcent *getrpcent (void) ; extern int getrpcbyname_r (const char *__name, struct rpcent *__result_buf, char *__buffer, size_t __buflen, struct rpcent **__result) ; extern int getrpcbynumber_r (int __number, struct rpcent *__result_buf, char *__buffer, size_t __buflen, struct rpcent **__result) ; extern int getrpcent_r (struct rpcent *__result_buf, char *__buffer, size_t __buflen, struct rpcent **__result) ; #line 34 "/usr/include/netdb.h" #line 42 "/usr/include/netdb.h" #line 1 "/usr/include/bits/netdb.h" struct netent { char *n_name; char **n_aliases; int n_addrtype; uint32_t n_net; }; #line 44 "/usr/include/netdb.h" #line 52 "/usr/include/netdb.h" extern int *__h_errno_location (void) ; #line 75 "/usr/include/netdb.h" extern void herror (const char *__str) ; extern const char *hstrerror (int __err_num) ; struct hostent { char *h_name; char **h_aliases; int h_addrtype; int h_length; char **h_addr_list; }; extern void sethostent (int __stay_open); extern void endhostent (void); extern struct hostent *gethostent (void); extern struct hostent *gethostbyaddr (const void *__addr, __socklen_t __len, int __type); extern struct hostent *gethostbyname (const char *__name); extern struct hostent *gethostbyname2 (const char *__name, int __af); extern int gethostent_r (struct hostent * __result_buf, char * __buf, size_t __buflen, struct hostent ** __result, int * __h_errnop); extern int gethostbyaddr_r (const void * __addr, __socklen_t __len, int __type, struct hostent * __result_buf, char * __buf, size_t __buflen, struct hostent ** __result, int * __h_errnop); extern int gethostbyname_r (const char * __name, struct hostent * __result_buf, char * __buf, size_t __buflen, struct hostent ** __result, int * __h_errnop); extern int gethostbyname2_r (const char * __name, int __af, struct hostent * __result_buf, char * __buf, size_t __buflen, struct hostent ** __result, int * __h_errnop); extern void setnetent (int __stay_open); extern void endnetent (void); extern struct netent *getnetent (void); extern struct netent *getnetbyaddr (uint32_t __net, int __type); extern struct netent *getnetbyname (const char *__name); extern int getnetent_r (struct netent * __result_buf, char * __buf, size_t __buflen, struct netent ** __result, int * __h_errnop); extern int getnetbyaddr_r (uint32_t __net, int __type, struct netent * __result_buf, char * __buf, size_t __buflen, struct netent ** __result, int * __h_errnop); extern int getnetbyname_r (const char * __name, struct netent * __result_buf, char * __buf, size_t __buflen, struct netent ** __result, int * __h_errnop); struct servent { char *s_name; char **s_aliases; int s_port; char *s_proto; }; extern void setservent (int __stay_open); extern void endservent (void); extern struct servent *getservent (void); extern struct servent *getservbyname (const char *__name, const char *__proto); extern struct servent *getservbyport (int __port, const char *__proto); extern int getservent_r (struct servent * __result_buf, char * __buf, size_t __buflen, struct servent ** __result); extern int getservbyname_r (const char * __name, const char * __proto, struct servent * __result_buf, char * __buf, size_t __buflen, struct servent ** __result); extern int getservbyport_r (int __port, const char * __proto, struct servent * __result_buf, char * __buf, size_t __buflen, struct servent ** __result); struct protoent { char *p_name; char **p_aliases; int p_proto; }; extern void setprotoent (int __stay_open); extern void endprotoent (void); extern struct protoent *getprotoent (void); extern struct protoent *getprotobyname (const char *__name); extern struct protoent *getprotobynumber (int __proto); extern int getprotoent_r (struct protoent * __result_buf, char * __buf, size_t __buflen, struct protoent ** __result); extern int getprotobyname_r (const char * __name, struct protoent * __result_buf, char * __buf, size_t __buflen, struct protoent ** __result); extern int getprotobynumber_r (int __proto, struct protoent * __result_buf, char * __buf, size_t __buflen, struct protoent ** __result); extern int setnetgrent (const char *__netgroup); extern void endnetgrent (void); extern int getnetgrent (char ** __hostp, char ** __userp, char ** __domainp); extern int innetgr (const char *__netgroup, const char *__host, const char *__user, const char *domain); extern int getnetgrent_r (char ** __hostp, char ** __userp, char ** __domainp, char * __buffer, size_t __buflen); extern int rcmd (char ** __ahost, unsigned short int __rport, const char * __locuser, const char * __remuser, const char * __cmd, int * __fd2p); extern int rcmd_af (char ** __ahost, unsigned short int __rport, const char * __locuser, const char * __remuser, const char * __cmd, int * __fd2p, sa_family_t __af); extern int rexec (char ** __ahost, int __rport, const char * __name, const char * __pass, const char * __cmd, int * __fd2p); extern int rexec_af (char ** __ahost, int __rport, const char * __name, const char * __pass, const char * __cmd, int * __fd2p, sa_family_t __af); extern int ruserok (const char *__rhost, int __suser, const char *__remuser, const char *__locuser); extern int ruserok_af (const char *__rhost, int __suser, const char *__remuser, const char *__locuser, sa_family_t __af); extern int rresvport (int *__alport); extern int rresvport_af (int *__alport, sa_family_t __af); struct addrinfo { int ai_flags; int ai_family; int ai_socktype; int ai_protocol; socklen_t ai_addrlen; struct sockaddr *ai_addr; char *ai_canonname; struct addrinfo *ai_next; }; #line 567 "/usr/include/netdb.h" #line 587 "/usr/include/netdb.h" #line 609 "/usr/include/netdb.h" #line 625 "/usr/include/netdb.h" extern int getaddrinfo (const char * __name, const char * __service, const struct addrinfo * __req, struct addrinfo ** __pai); extern void freeaddrinfo (struct addrinfo *__ai) ; extern const char *gai_strerror (int __ecode) ; extern int getnameinfo (const struct sockaddr * __sa, socklen_t __salen, char * __host, socklen_t __hostlen, char * __serv, socklen_t __servlen, unsigned int __flags); #line 681 "/usr/include/netdb.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_NETDB_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: search.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/search.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 24 "/usr/include/search.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 27 "/usr/include/search.h" #line 42 "/usr/include/search.h" extern void insque (void *__elem, void *__prev) ; extern void remque (void *__elem) ; typedef int (*__compar_fn_t) (const void *, const void *); typedef enum { FIND, ENTER } ACTION; typedef struct entry { char *key; void *data; } ENTRY; struct _ENTRY; extern ENTRY *hsearch (ENTRY __item, ACTION __action) ; extern int hcreate (size_t __nel) ; extern void hdestroy (void) ; #line 114 "/usr/include/search.h" typedef enum { preorder, postorder, endorder, leaf } VISIT; extern void *tsearch (const void *__key, void **__rootp, __compar_fn_t __compar); extern void *tfind (const void *__key, void *const *__rootp, __compar_fn_t __compar); extern void *tdelete (const void * __key, void ** __rootp, __compar_fn_t __compar); typedef void (*__action_fn_t) (const void *__nodep, VISIT __value, int __level); extern void twalk (const void *__root, __action_fn_t __action); #line 163 "/usr/include/search.h" extern void *lfind (const void *__key, const void *__base, size_t *__nmemb, size_t __size, __compar_fn_t __compar); extern void *lsearch (const void *__key, void *__base, size_t *__nmemb, size_t __size, __compar_fn_t __compar); #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SEARCH_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: mathimf.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "mathimf.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "mathimf.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "mathimf.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c".: ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/procfs.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/sys/procfs.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/sys/procfs.h" #line 1 "/usr/include/signal.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 30 "/usr/include/signal.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 100 "/usr/include/bits/sigset.h" extern int __sigismember (const __sigset_t *, int); extern int __sigaddset (__sigset_t *, int); extern int __sigdelset (__sigset_t *, int); #line 124 "/usr/include/bits/sigset.h" #line 34 "/usr/include/signal.h" typedef __sig_atomic_t sig_atomic_t; typedef __sigset_t sigset_t; #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 58 "/usr/include/signal.h" #line 1 "/usr/include/bits/signum.h" #line 52 "/usr/include/bits/signum.h" #line 72 "/usr/include/bits/signum.h" #line 59 "/usr/include/signal.h" typedef __pid_t pid_t; typedef __uid_t uid_t; typedef void (*__sighandler_t) (int); extern __sighandler_t __sysv_signal (int __sig, __sighandler_t __handler) ; extern __sighandler_t signal (int __sig, __sighandler_t __handler) ; #line 104 "/usr/include/signal.h" #line 112 "/usr/include/signal.h" extern int kill (__pid_t __pid, int __sig) ; extern int killpg (__pid_t __pgrp, int __sig) ; extern int raise (int __sig) ; extern __sighandler_t ssignal (int __sig, __sighandler_t __handler) ; extern int gsignal (int __sig) ; extern void psignal (int __sig, const char *__s); extern int __sigpause (int __sig_or_mask, int __is_sig); #line 169 "/usr/include/signal.h" extern int sigblock (int __mask) ; extern int sigsetmask (int __mask) ; extern int siggetmask (void) ; typedef __sighandler_t sig_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 210 "/usr/include/signal.h" #line 1 "/usr/include/bits/siginfo.h" #line 1 "/usr/include/bits/wordsize.h" #line 26 "/usr/include/bits/siginfo.h" typedef union sigval { int sival_int; void *sival_ptr; } sigval_t; #line 50 "/usr/include/bits/siginfo.h" typedef struct siginfo { int si_signo; int si_errno; int si_code; union { int _pad[((128 / sizeof (int)) - 4)]; struct { __pid_t si_pid; __uid_t si_uid; } _kill; struct { int si_tid; int si_overrun; sigval_t si_sigval; } _timer; struct { __pid_t si_pid; __uid_t si_uid; sigval_t si_sigval; } _rt; struct { __pid_t si_pid; __uid_t si_uid; int si_status; __clock_t si_utime; __clock_t si_stime; } _sigchld; struct { void *si_addr; int si_trapno; } _sigfault; struct { int si_band; int si_fd; } _sigpoll; } _sifields; } siginfo_t; #line 127 "/usr/include/bits/siginfo.h" enum { SI_ASYNCNL = -60, SI_TKILL = -6, SI_SIGIO, SI_ASYNCIO, SI_MESGQ, SI_TIMER, SI_QUEUE, SI_USER, SI_KERNEL = 0x80 }; enum { ILL_ILLOPC = 1, ILL_ILLOPN, ILL_ILLADR, ILL_ILLTRP, ILL_PRVOPC, ILL_PRVREG, ILL_COPROC, ILL_BADSTK }; enum { FPE_INTDIV = 1, FPE_INTOVF, FPE_FLTDIV, FPE_FLTOVF, FPE_FLTUND, FPE_FLTRES, FPE_FLTINV, FPE_FLTSUB }; enum { SEGV_MAPERR = 1, SEGV_ACCERR }; enum { BUS_ADRALN = 1, BUS_ADRERR, BUS_OBJERR }; enum { TRAP_BRKPT = 1, TRAP_TRACE }; enum { CLD_EXITED = 1, CLD_KILLED, CLD_DUMPED, CLD_TRAPPED, CLD_STOPPED, CLD_CONTINUED }; enum { POLL_IN = 1, POLL_OUT, POLL_MSG, POLL_ERR, POLL_PRI, POLL_HUP }; enum { EMT_TAGOVF = 1 }; #line 281 "/usr/include/bits/siginfo.h" typedef struct sigevent { sigval_t sigev_value; int sigev_signo; int sigev_notify; union { int _pad[((64 / sizeof (int)) - 4)]; struct { void (*_function) (sigval_t); void *_attribute; } _sigev_thread; } _sigev_un; } sigevent_t; enum { SIGEV_SIGNAL = 0, SIGEV_NONE, SIGEV_THREAD, SIGEV_THREAD_ID = 4 }; #line 213 "/usr/include/signal.h" extern int sigemptyset (sigset_t *__set) ; extern int sigfillset (sigset_t *__set) ; extern int sigaddset (sigset_t *__set, int __signo) ; extern int sigdelset (sigset_t *__set, int __signo) ; extern int sigismember (const sigset_t *__set, int __signo) ; #line 243 "/usr/include/signal.h" #line 1 "/usr/include/bits/sigaction.h" struct sigaction { union { __sighandler_t sa_handler; void (*sa_sigaction) (int, siginfo_t *, void *); } __sigaction_handler; __sigset_t sa_mask; unsigned long sa_flags; void (*sa_restorer) (void); }; #line 66 "/usr/include/bits/sigaction.h" #line 247 "/usr/include/signal.h" extern int sigprocmask (int __how, const sigset_t * __set, sigset_t * __oset) ; extern int sigsuspend (const sigset_t *__set) ; extern int sigaction (int __sig, const struct sigaction * __act, struct sigaction * __oact) ; extern int sigpending (sigset_t *__set) ; extern int sigwait (const sigset_t * __set, int * __sig) ; extern int sigwaitinfo (const sigset_t * __set, siginfo_t * __info) ; extern int sigtimedwait (const sigset_t * __set, siginfo_t * __info, const struct timespec * __timeout) ; extern int sigqueue (__pid_t __pid, int __sig, const union sigval __val) ; extern const char *const _sys_siglist[65]; extern const char *const sys_siglist[65]; struct sigvec { __sighandler_t sv_handler; int sv_mask; int sv_flags; }; extern int sigvec (int __sig, const struct sigvec *__vec, struct sigvec *__ovec) ; #line 1 "/usr/include/bits/sigcontext.h" #line 1 "/usr/include/bits/wordsize.h" #line 24 "/usr/include/bits/sigcontext.h" #line 1 "/usr/include/stdint.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/stdint.h" #line 1 "/usr/include/bits/wchar.h" #line 28 "/usr/include/stdint.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/stdint.h" typedef signed char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char uint8_t; typedef unsigned short int uint16_t; typedef unsigned int uint32_t; typedef unsigned long int uint64_t; typedef signed char int_least8_t; typedef short int int_least16_t; typedef int int_least32_t; typedef long int int_least64_t; typedef unsigned char uint_least8_t; typedef unsigned short int uint_least16_t; typedef unsigned int uint_least32_t; typedef unsigned long int uint_least64_t; typedef signed char int_fast8_t; typedef long int int_fast16_t; typedef long int int_fast32_t; typedef long int int_fast64_t; #line 102 "/usr/include/stdint.h" typedef unsigned char uint_fast8_t; typedef unsigned long int uint_fast16_t; typedef unsigned long int uint_fast32_t; typedef unsigned long int uint_fast64_t; #line 115 "/usr/include/stdint.h" typedef long int intptr_t; typedef unsigned long int uintptr_t; #line 131 "/usr/include/stdint.h" typedef long int intmax_t; typedef unsigned long int uintmax_t; #line 143 "/usr/include/stdint.h" #line 156 "/usr/include/stdint.h" #line 205 "/usr/include/stdint.h" #line 215 "/usr/include/stdint.h" #line 226 "/usr/include/stdint.h" #line 238 "/usr/include/stdint.h" #line 259 "/usr/include/stdint.h" #line 298 "/usr/include/stdint.h" #line 308 "/usr/include/stdint.h" #line 317 "/usr/include/stdint.h" #line 25 "/usr/include/bits/sigcontext.h" #line 48 "/usr/include/bits/sigcontext.h" typedef struct { unsigned int si_float_regs [64]; unsigned long si_fsr; unsigned long si_gsr; unsigned long si_fprs; uint64_t si_xglob_regs[32]; uint32_t si_xfloat_regs[448]; uint64_t si_xasr; } __siginfo_fpu_t; struct sigcontext { char sigc_info[128]; struct { unsigned long u_regs[16]; unsigned long tstate; unsigned long tpc; unsigned long tnpc; unsigned int y; unsigned int fprs; } sigc_regs; __siginfo_fpu_t * sigc_fpu_save; uint64_t si_txar; uint64_t si_sccr; struct { void * ss_sp; int ss_flags; unsigned long ss_size; } sigc_stack; unsigned long sigc_mask; }; #line 334 "/usr/include/signal.h" extern int sigreturn (struct sigcontext *__scp) ; #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 344 "/usr/include/signal.h" extern int siginterrupt (int __sig, int __interrupt) ; #line 1 "/usr/include/bits/sigstack.h" struct sigstack { void *ss_sp; int ss_onstack; }; enum { SS_ONSTACK = 1, SS_DISABLE }; typedef struct sigaltstack { void *ss_sp; int ss_flags; size_t ss_size; } stack_t; #line 351 "/usr/include/signal.h" extern int sigstack (struct sigstack *__ss, struct sigstack *__oss) ; extern int sigaltstack (const struct sigaltstack * __ss, struct sigaltstack * __oss) ; #line 384 "/usr/include/signal.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 389 "/usr/include/signal.h" #line 1 "/usr/include/bits/sigthread.h" extern int pthread_sigmask (int __how, const __sigset_t * __newmask, __sigset_t * __oldmask); extern int pthread_kill (pthread_t __threadid, int __signo) ; #line 390 "/usr/include/signal.h" extern int __libc_current_sigrtmin (void) ; extern int __libc_current_sigrtmax (void) ; #line 28 "/usr/include/sys/procfs.h" #line 1 "/usr/include/sys/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 24 "/usr/include/sys/time.h" #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 28 "/usr/include/sys/time.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 30 "/usr/include/sys/time.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" #line 35 "/usr/include/bits/sigset.h" #line 35 "/usr/include/sys/select.h" #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 32 "/usr/include/sys/time.h" #line 52 "/usr/include/sys/time.h" struct timezone { int tz_minuteswest; int tz_dsttime; }; typedef struct timezone * __timezone_ptr_t; extern int gettimeofday (struct timeval * __tv, __timezone_ptr_t __tz) ; extern int settimeofday (const struct timeval *__tv, const struct timezone *__tz) ; extern int adjtime (const struct timeval *__delta, struct timeval *__olddelta) ; enum __itimer_which { ITIMER_REAL = 0, ITIMER_VIRTUAL = 1, ITIMER_PROF = 2 }; struct itimerval { struct timeval it_interval; struct timeval it_value; }; typedef int __itimer_which_t; extern int getitimer (__itimer_which_t __which, struct itimerval *__value) ; extern int setitimer (__itimer_which_t __which, const struct itimerval * __new, struct itimerval * __old) ; extern int utimes (const char *__file, const struct timeval __tvp[2]) ; extern int lutimes (const char *__file, const struct timeval __tvp[2]) ; extern int futimes (int __fd, const struct timeval __tvp[2]) ; #line 159 "/usr/include/sys/time.h" #line 190 "/usr/include/sys/time.h" #line 29 "/usr/include/sys/procfs.h" #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; #line 172 "/usr/include/sys/types.h" typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 30 "/usr/include/sys/procfs.h" #line 1 "/usr/include/sys/ucontext.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/sys/ucontext.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/sys/ucontext.h" #line 82 "/usr/include/sys/ucontext.h" typedef unsigned long mc_greg_t; typedef mc_greg_t mc_gregset_t[53]; struct mc_fq { unsigned long *mcfq_addr; unsigned int mcfq_insn; }; struct mc_fpu { union { unsigned int sregs[512]; unsigned long dregs[256]; long double qregs[128]; } mcfpu_fregs; unsigned long mcfpu_fsr; unsigned long mcfpu_fprs; unsigned long mcfpu_gsr; unsigned long mcfpu_xasr; struct mc_fq *mcfpu_fq; unsigned char mcfpu_qcnt; unsigned char mcfpu_qentsz; unsigned char mcfpu_enab; unsigned char pad[5]; }; typedef struct mc_fpu mc_fpu_t; typedef struct { mc_gregset_t mc_gregs; mc_greg_t mc_fp; mc_greg_t mc_i7; mc_fpu_t mc_fpregs; } mcontext_t; typedef struct ucontext { struct ucontext *uc_link; unsigned long uc_flags; unsigned long __uc_sigmask; mcontext_t uc_mcontext; stack_t uc_stack; __sigset_t uc_sigmask; } ucontext_t; #line 186 "/usr/include/sys/ucontext.h" typedef long greg_t; #line 211 "/usr/include/sys/ucontext.h" typedef greg_t gregset_t[21]; struct rwindow { greg_t rw_local[8]; greg_t rw_in[8]; }; typedef struct gwindows { int wbcnt; int *spbuf[31]; struct rwindow wbuf[31]; } gwindows_t; struct fpq { unsigned long *fpq_addr; unsigned long fpq_instr; }; struct fq { union { double whole; struct fpq fpq; } FQu; }; typedef struct fpu { union { unsigned fpu_regs[512]; double fpu_dregs[256]; long double fpu_qregs[128]; } fpu_fr; struct fq *fpu_q; unsigned long fpu_fsr; unsigned char fpu_qcnt; unsigned char fpu_q_entrysize; unsigned char fpu_en; unsigned long fpu_xasr; } fpregset_t; #line 31 "/usr/include/sys/procfs.h" #line 1 "/usr/include/sys/user.h" struct sunos_regs { unsigned int psr, pc, npc, y; unsigned int regs[15]; }; struct sunos_fpqueue { unsigned int *addr; unsigned int inst; }; struct sunos_fp { union { unsigned int regs[32]; double reg_dbls[16]; } fregs; unsigned int fsr; unsigned int flags; unsigned int extra; unsigned int fpq_count; struct sunos_fpqueue fpq[16]; }; struct sunos_fpu { struct sunos_fp fpstatus; }; struct user { unsigned int magic; unsigned int len; struct sunos_regs regs; struct { unsigned char a_dynamic :1; unsigned char a_toolversion :7; unsigned char a_machtype; unsigned short a_info; unsigned int a_text; unsigned int a_data; unsigned int a_bss; unsigned int a_syms; unsigned int a_entry; unsigned int a_trsize; unsigned int a_drsize; } uexec; int signal; size_t u_tsize; size_t u_dsize; size_t u_ssize; char u_comm[17]; struct sunos_fpu fpu; unsigned int sigcode; }; #line 32 "/usr/include/sys/procfs.h" #line 1 "/usr/include/bits/wordsize.h" #line 33 "/usr/include/sys/procfs.h" typedef struct { unsigned long pr_regs[32]; unsigned long pr_fsr; unsigned long pr_gsr; unsigned long pr_fprs; } elf_fpregset_t; #line 68 "/usr/include/sys/procfs.h" typedef unsigned long elf_greg_t; typedef elf_greg_t elf_gregset_t[36]; struct elf_siginfo { int si_signo; int si_code; int si_errno; }; struct elf_prstatus { struct elf_siginfo pr_info; short int pr_cursig; unsigned long int pr_sigpend; unsigned long int pr_sighold; __pid_t pr_pid; __pid_t pr_ppid; __pid_t pr_pgrp; __pid_t pr_sid; struct timeval pr_utime; struct timeval pr_stime; struct timeval pr_cutime; struct timeval pr_cstime; elf_gregset_t pr_reg; int pr_fpvalid; }; struct elf_prpsinfo { char pr_state; char pr_sname; char pr_zomb; char pr_nice; unsigned long int pr_flag; unsigned int pr_uid; unsigned int pr_gid; int pr_pid, pr_ppid, pr_pgrp, pr_sid; char pr_fname[16]; char pr_psargs[(80)]; }; typedef void *psaddr_t; typedef elf_gregset_t prgregset_t; typedef elf_fpregset_t prfpregset_t; #line 1 "/usr/include/xos_sft/asm/xreg.h" struct xregs { uint64_t xregs[32]; uint64_t txar; uint64_t sccr; uint64_t watchpoint; uint64_t dcucr; uint64_t rsv[12]; }; struct xfpregs { uint64_t xfpregs[224]; uint64_t xasr; uint64_t fprs; }; #line 136 "/usr/include/sys/procfs.h" typedef struct xregs prxgregset_t; typedef struct xfpregs prxfpregset_t; typedef __pid_t lwpid_t; typedef struct elf_prstatus prstatus_t; typedef struct elf_prpsinfo prpsinfo_t; typedef struct { union { unsigned int pr_regs[32]; double pr_dregs[16]; } pr_fr; unsigned int __unused; unsigned int pr_fsr; unsigned char pr_qcnt; unsigned char pr_q_entrysize; unsigned char pr_en; unsigned int pr_q[64]; } elf_fpregset_t32; typedef unsigned int elf_greg_t32; typedef elf_greg_t32 elf_gregset_t32[38]; struct elf_prstatus32 { struct elf_siginfo pr_info; short int pr_cursig; unsigned int pr_sigpend; unsigned int pr_sighold; __pid_t pr_pid; __pid_t pr_ppid; __pid_t pr_pgrp; __pid_t pr_sid; struct { int tv_sec, tv_usec; } pr_utime, pr_stime, pr_cutime, pr_cstime; elf_gregset_t32 pr_reg; int pr_fpvalid; }; struct elf_prpsinfo32 { char pr_state; char pr_sname; char pr_zomb; char pr_nice; unsigned int pr_flag; unsigned short int pr_uid; unsigned short int pr_gid; int pr_pid, pr_ppid, pr_pgrp, pr_sid; char pr_fname[16]; char pr_psargs[(80)]; }; typedef elf_gregset_t32 prgregset32_t; typedef elf_fpregset_t32 prfpregset32_t; typedef struct elf_prstatus32 prstatus32_t; typedef struct elf_prpsinfo32 prpsinfo32_t; #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_PROCFS_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/resource.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/sys/resource.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/sys/resource.h" #line 1 "/usr/include/bits/resource.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 26 "/usr/include/bits/resource.h" enum __rlimit_resource { RLIMIT_CPU = 0, RLIMIT_FSIZE = 1, RLIMIT_DATA = 2, RLIMIT_STACK = 3, RLIMIT_CORE = 4, __RLIMIT_RSS = 5, RLIMIT_NOFILE = 6, __RLIMIT_OFILE = RLIMIT_NOFILE, RLIMIT_AS = 9, __RLIMIT_NPROC = 7, __RLIMIT_MEMLOCK = 8, __RLIMIT_LOCKS = 10, __RLIMIT_SIGPENDING = 11, __RLIMIT_MSGQUEUE = 12, __RLIMIT_NICE = 13, __RLIMIT_RTPRIO = 14, __RLIMIT_NLIMITS = 15, __RLIM_NLIMITS = __RLIMIT_NLIMITS }; #line 135 "/usr/include/bits/resource.h" typedef __rlim_t rlim_t; #line 150 "/usr/include/bits/resource.h" struct rlimit { rlim_t rlim_cur; rlim_t rlim_max; }; #line 168 "/usr/include/bits/resource.h" enum __rusage_who { RUSAGE_SELF = 0, RUSAGE_CHILDREN = -1 }; #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 183 "/usr/include/bits/resource.h" struct rusage { struct timeval ru_utime; struct timeval ru_stime; long int ru_maxrss; long int ru_ixrss; long int ru_idrss; long int ru_isrss; long int ru_minflt; long int ru_majflt; long int ru_nswap; long int ru_inblock; long int ru_oublock; long int ru_msgsnd; long int ru_msgrcv; long int ru_nsignals; long int ru_nvcsw; long int ru_nivcsw; }; enum __priority_which { PRIO_PROCESS = 0, PRIO_PGRP = 1, PRIO_USER = 2 }; #line 26 "/usr/include/sys/resource.h" typedef __id_t id_t; typedef int __rlimit_resource_t; typedef int __rusage_who_t; typedef int __priority_which_t; extern int getrlimit (__rlimit_resource_t __resource, struct rlimit *__rlimits) ; #line 65 "/usr/include/sys/resource.h" extern int setrlimit (__rlimit_resource_t __resource, const struct rlimit *__rlimits) ; #line 85 "/usr/include/sys/resource.h" extern int getrusage (__rusage_who_t __who, struct rusage *__usage) ; extern int getpriority (__priority_which_t __which, id_t __who) ; extern int setpriority (__priority_which_t __which, id_t __who, int __prio) ; #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_RESOURCE_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: unistd.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/unistd.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/unistd.h" #line 66 "/usr/include/unistd.h" #line 1 "/usr/include/bits/posix_opt.h" #line 174 "/usr/include/unistd.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 189 "/usr/include/unistd.h" typedef __ssize_t ssize_t; #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 198 "/usr/include/unistd.h" typedef __gid_t gid_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 224 "/usr/include/unistd.h" typedef __useconds_t useconds_t; typedef __pid_t pid_t; typedef __intptr_t intptr_t; typedef __socklen_t socklen_t; extern int access (const char *__name, int __type) ; #line 270 "/usr/include/unistd.h" #line 278 "/usr/include/unistd.h" extern __off_t lseek (int __fd, __off_t __offset, int __whence) ; #line 315 "/usr/include/unistd.h" extern int close (int __fd); extern ssize_t read (int __fd, void *__buf, size_t __nbytes) ; extern ssize_t write (int __fd, const void *__buf, size_t __n) ; #line 379 "/usr/include/unistd.h" extern int pipe (int __pipedes[2]) ; extern unsigned int alarm (unsigned int __seconds) ; extern unsigned int sleep (unsigned int __seconds); extern __useconds_t ualarm (__useconds_t __value, __useconds_t __interval) ; extern int usleep (__useconds_t __useconds); extern int pause (void); extern int chown (const char *__file, __uid_t __owner, __gid_t __group) ; extern int fchown (int __fd, __uid_t __owner, __gid_t __group) ; extern int lchown (const char *__file, __uid_t __owner, __gid_t __group) ; #line 455 "/usr/include/unistd.h" extern int chdir (const char *__path) ; extern int fchdir (int __fd) ; extern char *getcwd (char *__buf, size_t __size) ; #line 479 "/usr/include/unistd.h" extern char *getwd (char *__buf) ; extern int dup (int __fd) ; extern int dup2 (int __fd, int __fd2) ; extern char **__environ; extern int execve (const char *__path, char *const __argv[], char *const __envp[]) ; #line 513 "/usr/include/unistd.h" extern int execv (const char *__path, char *const __argv[]) ; extern int execle (const char *__path, const char *__arg, ...) ; extern int execl (const char *__path, const char *__arg, ...) ; extern int execvp (const char *__file, char *const __argv[]) ; extern int execlp (const char *__file, const char *__arg, ...) ; extern int nice (int __inc) ; extern void _exit (int __status) ; #line 1 "/usr/include/bits/confname.h" enum { _PC_LINK_MAX, _PC_MAX_CANON, _PC_MAX_INPUT, _PC_NAME_MAX, _PC_PATH_MAX, _PC_PIPE_BUF, _PC_CHOWN_RESTRICTED, _PC_NO_TRUNC, _PC_VDISABLE, _PC_SYNC_IO, _PC_ASYNC_IO, _PC_PRIO_IO, _PC_SOCK_MAXBUF, _PC_FILESIZEBITS, _PC_REC_INCR_XFER_SIZE, _PC_REC_MAX_XFER_SIZE, _PC_REC_MIN_XFER_SIZE, _PC_REC_XFER_ALIGN, _PC_ALLOC_SIZE_MIN, _PC_SYMLINK_MAX, _PC_2_SYMLINKS }; enum { _SC_ARG_MAX, _SC_CHILD_MAX, _SC_CLK_TCK, _SC_NGROUPS_MAX, _SC_OPEN_MAX, _SC_STREAM_MAX, _SC_TZNAME_MAX, _SC_JOB_CONTROL, _SC_SAVED_IDS, _SC_REALTIME_SIGNALS, _SC_PRIORITY_SCHEDULING, _SC_TIMERS, _SC_ASYNCHRONOUS_IO, _SC_PRIORITIZED_IO, _SC_SYNCHRONIZED_IO, _SC_FSYNC, _SC_MAPPED_FILES, _SC_MEMLOCK, _SC_MEMLOCK_RANGE, _SC_MEMORY_PROTECTION, _SC_MESSAGE_PASSING, _SC_SEMAPHORES, _SC_SHARED_MEMORY_OBJECTS, _SC_AIO_LISTIO_MAX, _SC_AIO_MAX, _SC_AIO_PRIO_DELTA_MAX, _SC_DELAYTIMER_MAX, _SC_MQ_OPEN_MAX, _SC_MQ_PRIO_MAX, _SC_VERSION, _SC_PAGESIZE, _SC_RTSIG_MAX, _SC_SEM_NSEMS_MAX, _SC_SEM_VALUE_MAX, _SC_SIGQUEUE_MAX, _SC_TIMER_MAX, _SC_BC_BASE_MAX, _SC_BC_DIM_MAX, _SC_BC_SCALE_MAX, _SC_BC_STRING_MAX, _SC_COLL_WEIGHTS_MAX, _SC_EQUIV_CLASS_MAX, _SC_EXPR_NEST_MAX, _SC_LINE_MAX, _SC_RE_DUP_MAX, _SC_CHARCLASS_NAME_MAX, _SC_2_VERSION, _SC_2_C_BIND, _SC_2_C_DEV, _SC_2_FORT_DEV, _SC_2_FORT_RUN, _SC_2_SW_DEV, _SC_2_LOCALEDEF, _SC_PII, _SC_PII_XTI, _SC_PII_SOCKET, _SC_PII_INTERNET, _SC_PII_OSI, _SC_POLL, _SC_SELECT, _SC_UIO_MAXIOV, _SC_IOV_MAX = _SC_UIO_MAXIOV, _SC_PII_INTERNET_STREAM, _SC_PII_INTERNET_DGRAM, _SC_PII_OSI_COTS, _SC_PII_OSI_CLTS, _SC_PII_OSI_M, _SC_T_IOV_MAX, _SC_THREADS, _SC_THREAD_SAFE_FUNCTIONS, _SC_GETGR_R_SIZE_MAX, _SC_GETPW_R_SIZE_MAX, _SC_LOGIN_NAME_MAX, _SC_TTY_NAME_MAX, _SC_THREAD_DESTRUCTOR_ITERATIONS, _SC_THREAD_KEYS_MAX, _SC_THREAD_STACK_MIN, _SC_THREAD_THREADS_MAX, _SC_THREAD_ATTR_STACKADDR, _SC_THREAD_ATTR_STACKSIZE, _SC_THREAD_PRIORITY_SCHEDULING, _SC_THREAD_PRIO_INHERIT, _SC_THREAD_PRIO_PROTECT, _SC_THREAD_PROCESS_SHARED, _SC_NPROCESSORS_CONF, _SC_NPROCESSORS_ONLN, _SC_PHYS_PAGES, _SC_AVPHYS_PAGES, _SC_ATEXIT_MAX, _SC_PASS_MAX, _SC_XOPEN_VERSION, _SC_XOPEN_XCU_VERSION, _SC_XOPEN_UNIX, _SC_XOPEN_CRYPT, _SC_XOPEN_ENH_I18N, _SC_XOPEN_SHM, _SC_2_CHAR_TERM, _SC_2_C_VERSION, _SC_2_UPE, _SC_XOPEN_XPG2, _SC_XOPEN_XPG3, _SC_XOPEN_XPG4, _SC_CHAR_BIT, _SC_CHAR_MAX, _SC_CHAR_MIN, _SC_INT_MAX, _SC_INT_MIN, _SC_LONG_BIT, _SC_WORD_BIT, _SC_MB_LEN_MAX, _SC_NZERO, _SC_SSIZE_MAX, _SC_SCHAR_MAX, _SC_SCHAR_MIN, _SC_SHRT_MAX, _SC_SHRT_MIN, _SC_UCHAR_MAX, _SC_UINT_MAX, _SC_ULONG_MAX, _SC_USHRT_MAX, _SC_NL_ARGMAX, _SC_NL_LANGMAX, _SC_NL_MSGMAX, _SC_NL_NMAX, _SC_NL_SETMAX, _SC_NL_TEXTMAX, _SC_XBS5_ILP32_OFF32, _SC_XBS5_ILP32_OFFBIG, _SC_XBS5_LP64_OFF64, _SC_XBS5_LPBIG_OFFBIG, _SC_XOPEN_LEGACY, _SC_XOPEN_REALTIME, _SC_XOPEN_REALTIME_THREADS, _SC_ADVISORY_INFO, _SC_BARRIERS, _SC_BASE, _SC_C_LANG_SUPPORT, _SC_C_LANG_SUPPORT_R, _SC_CLOCK_SELECTION, _SC_CPUTIME, _SC_THREAD_CPUTIME, _SC_DEVICE_IO, _SC_DEVICE_SPECIFIC, _SC_DEVICE_SPECIFIC_R, _SC_FD_MGMT, _SC_FIFO, _SC_PIPE, _SC_FILE_ATTRIBUTES, _SC_FILE_LOCKING, _SC_FILE_SYSTEM, _SC_MONOTONIC_CLOCK, _SC_MULTI_PROCESS, _SC_SINGLE_PROCESS, _SC_NETWORKING, _SC_READER_WRITER_LOCKS, _SC_SPIN_LOCKS, _SC_REGEXP, _SC_REGEX_VERSION, _SC_SHELL, _SC_SIGNALS, _SC_SPAWN, _SC_SPORADIC_SERVER, _SC_THREAD_SPORADIC_SERVER, _SC_SYSTEM_DATABASE, _SC_SYSTEM_DATABASE_R, _SC_TIMEOUTS, _SC_TYPED_MEMORY_OBJECTS, _SC_USER_GROUPS, _SC_USER_GROUPS_R, _SC_2_PBS, _SC_2_PBS_ACCOUNTING, _SC_2_PBS_LOCATE, _SC_2_PBS_MESSAGE, _SC_2_PBS_TRACK, _SC_SYMLOOP_MAX, _SC_STREAMS, _SC_2_PBS_CHECKPOINT, _SC_V6_ILP32_OFF32, _SC_V6_ILP32_OFFBIG, _SC_V6_LP64_OFF64, _SC_V6_LPBIG_OFFBIG, _SC_HOST_NAME_MAX, _SC_TRACE, _SC_TRACE_EVENT_FILTER, _SC_TRACE_INHERIT, _SC_TRACE_LOG, _SC_LEVEL1_ICACHE_SIZE, _SC_LEVEL1_ICACHE_ASSOC, _SC_LEVEL1_ICACHE_LINESIZE, _SC_LEVEL1_DCACHE_SIZE, _SC_LEVEL1_DCACHE_ASSOC, _SC_LEVEL1_DCACHE_LINESIZE, _SC_LEVEL2_CACHE_SIZE, _SC_LEVEL2_CACHE_ASSOC, _SC_LEVEL2_CACHE_LINESIZE, _SC_LEVEL3_CACHE_SIZE, _SC_LEVEL3_CACHE_ASSOC, _SC_LEVEL3_CACHE_LINESIZE, _SC_LEVEL4_CACHE_SIZE, _SC_LEVEL4_CACHE_ASSOC, _SC_LEVEL4_CACHE_LINESIZE, _SC_IPV6 = _SC_LEVEL1_ICACHE_SIZE + 50, _SC_RAW_SOCKETS }; enum { _CS_PATH, _CS_V6_WIDTH_RESTRICTED_ENVS, _CS_GNU_LIBC_VERSION, _CS_GNU_LIBPTHREAD_VERSION, _CS_LFS_CFLAGS = 1000, _CS_LFS_LDFLAGS, _CS_LFS_LIBS, _CS_LFS_LINTFLAGS, _CS_LFS64_CFLAGS, _CS_LFS64_LDFLAGS, _CS_LFS64_LIBS, _CS_LFS64_LINTFLAGS, _CS_XBS5_ILP32_OFF32_CFLAGS = 1100, _CS_XBS5_ILP32_OFF32_LDFLAGS, _CS_XBS5_ILP32_OFF32_LIBS, _CS_XBS5_ILP32_OFF32_LINTFLAGS, _CS_XBS5_ILP32_OFFBIG_CFLAGS, _CS_XBS5_ILP32_OFFBIG_LDFLAGS, _CS_XBS5_ILP32_OFFBIG_LIBS, _CS_XBS5_ILP32_OFFBIG_LINTFLAGS, _CS_XBS5_LP64_OFF64_CFLAGS, _CS_XBS5_LP64_OFF64_LDFLAGS, _CS_XBS5_LP64_OFF64_LIBS, _CS_XBS5_LP64_OFF64_LINTFLAGS, _CS_XBS5_LPBIG_OFFBIG_CFLAGS, _CS_XBS5_LPBIG_OFFBIG_LDFLAGS, _CS_XBS5_LPBIG_OFFBIG_LIBS, _CS_XBS5_LPBIG_OFFBIG_LINTFLAGS, _CS_POSIX_V6_ILP32_OFF32_CFLAGS, _CS_POSIX_V6_ILP32_OFF32_LDFLAGS, _CS_POSIX_V6_ILP32_OFF32_LIBS, _CS_POSIX_V6_ILP32_OFF32_LINTFLAGS, _CS_POSIX_V6_ILP32_OFFBIG_CFLAGS, _CS_POSIX_V6_ILP32_OFFBIG_LDFLAGS, _CS_POSIX_V6_ILP32_OFFBIG_LIBS, _CS_POSIX_V6_ILP32_OFFBIG_LINTFLAGS, _CS_POSIX_V6_LP64_OFF64_CFLAGS, _CS_POSIX_V6_LP64_OFF64_LDFLAGS, _CS_POSIX_V6_LP64_OFF64_LIBS, _CS_POSIX_V6_LP64_OFF64_LINTFLAGS, _CS_POSIX_V6_LPBIG_OFFBIG_CFLAGS, _CS_POSIX_V6_LPBIG_OFFBIG_LDFLAGS, _CS_POSIX_V6_LPBIG_OFFBIG_LIBS, _CS_POSIX_V6_LPBIG_OFFBIG_LINTFLAGS }; #line 555 "/usr/include/unistd.h" extern long int pathconf (const char *__path, int __name) ; extern long int fpathconf (int __fd, int __name) ; extern long int sysconf (int __name) ; extern size_t confstr (int __name, char *__buf, size_t __len) ; extern __pid_t getpid (void) ; extern __pid_t getppid (void) ; extern __pid_t getpgrp (void) ; #line 589 "/usr/include/unistd.h" extern __pid_t __getpgid (__pid_t __pid) ; extern int setpgid (__pid_t __pid, __pid_t __pgid) ; extern int setpgrp (void) ; #line 630 "/usr/include/unistd.h" extern __pid_t setsid (void) ; extern __uid_t getuid (void) ; extern __uid_t geteuid (void) ; extern __gid_t getgid (void) ; extern __gid_t getegid (void) ; extern int getgroups (int __size, __gid_t __list[]) ; extern int setuid (__uid_t __uid) ; extern int setreuid (__uid_t __ruid, __uid_t __euid) ; extern int seteuid (__uid_t __uid) ; extern int setgid (__gid_t __gid) ; extern int setregid (__gid_t __rgid, __gid_t __egid) ; extern int setegid (__gid_t __gid) ; #line 718 "/usr/include/unistd.h" extern __pid_t fork (void) ; extern __pid_t vfork (void) ; extern char *ttyname (int __fd) ; extern int ttyname_r (int __fd, char *__buf, size_t __buflen) ; extern int isatty (int __fd) ; extern int ttyslot (void) ; extern int link (const char *__from, const char *__to) ; #line 766 "/usr/include/unistd.h" extern int symlink (const char *__from, const char *__to) ; extern ssize_t readlink (const char * __path, char * __buf, size_t __len) ; #line 790 "/usr/include/unistd.h" extern int unlink (const char *__name) ; extern int rmdir (const char *__path) ; extern __pid_t tcgetpgrp (int __fd) ; extern int tcsetpgrp (int __fd, __pid_t __pgrp_id) ; extern char *getlogin (void); extern int getlogin_r (char *__name, size_t __name_len) ; extern int setlogin (const char *__name) ; #line 1 "/usr/include/getopt.h" #line 48 "/usr/include/getopt.h" extern char *optarg; extern int optind; extern int opterr; extern int optopt; #line 122 "/usr/include/getopt.h" extern int getopt (int ___argc, char *const *___argv, const char *__shortopts) ; #line 169 "/usr/include/getopt.h" #line 838 "/usr/include/unistd.h" extern int gethostname (char *__name, size_t __len) ; extern int sethostname (const char *__name, size_t __len) ; extern int sethostid (long int __id) ; extern int getdomainname (char *__name, size_t __len) ; extern int setdomainname (const char *__name, size_t __len) ; extern int vhangup (void) ; extern int revoke (const char *__file) ; extern int profil (unsigned short int *__sample_buffer, size_t __size, size_t __offset, unsigned int __scale) ; extern int acct (const char *__name) ; extern char *getusershell (void) ; extern void endusershell (void) ; extern void setusershell (void) ; extern int daemon (int __nochdir, int __noclose) ; extern int chroot (const char *__path) ; extern char *getpass (const char *__prompt) ; extern int fsync (int __fd); extern long int gethostid (void); extern void sync (void) ; extern int getpagesize (void) ; extern int getdtablesize (void) ; extern int truncate (const char *__file, __off_t __length) ; #line 963 "/usr/include/unistd.h" extern int ftruncate (int __fd, __off_t __length) ; #line 982 "/usr/include/unistd.h" extern int brk (void *__addr) ; extern void *sbrk (intptr_t __delta) ; extern long int syscall (long int __sysno, ...) ; extern int lockf (int __fd, int __cmd, __off_t __len) ; #line 1047 "/usr/include/unistd.h" #line 1061 "/usr/include/unistd.h" extern int fdatasync (int __fildes); #line 1088 "/usr/include/unistd.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_UNISTD_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: netinet/in.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/netinet/in.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 24 "/usr/include/netinet/in.h" #line 1 "/usr/include/stdint.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/stdint.h" #line 1 "/usr/include/bits/wchar.h" #line 28 "/usr/include/stdint.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/stdint.h" typedef signed char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char uint8_t; typedef unsigned short int uint16_t; typedef unsigned int uint32_t; typedef unsigned long int uint64_t; typedef signed char int_least8_t; typedef short int int_least16_t; typedef int int_least32_t; typedef long int int_least64_t; typedef unsigned char uint_least8_t; typedef unsigned short int uint_least16_t; typedef unsigned int uint_least32_t; typedef unsigned long int uint_least64_t; typedef signed char int_fast8_t; typedef long int int_fast16_t; typedef long int int_fast32_t; typedef long int int_fast64_t; #line 102 "/usr/include/stdint.h" typedef unsigned char uint_fast8_t; typedef unsigned long int uint_fast16_t; typedef unsigned long int uint_fast32_t; typedef unsigned long int uint_fast64_t; #line 115 "/usr/include/stdint.h" typedef long int intptr_t; typedef unsigned long int uintptr_t; #line 131 "/usr/include/stdint.h" typedef long int intmax_t; typedef unsigned long int uintmax_t; #line 143 "/usr/include/stdint.h" #line 156 "/usr/include/stdint.h" #line 205 "/usr/include/stdint.h" #line 215 "/usr/include/stdint.h" #line 226 "/usr/include/stdint.h" #line 238 "/usr/include/stdint.h" #line 259 "/usr/include/stdint.h" #line 298 "/usr/include/stdint.h" #line 308 "/usr/include/stdint.h" #line 317 "/usr/include/stdint.h" #line 25 "/usr/include/netinet/in.h" #line 1 "/usr/include/sys/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/socket.h" #line 1 "/usr/include/sys/uio.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/sys/uio.h" #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; #line 172 "/usr/include/sys/types.h" typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 25 "/usr/include/sys/uio.h" #line 1 "/usr/include/bits/uio.h" struct iovec { void *iov_base; size_t iov_len; }; #line 30 "/usr/include/sys/uio.h" extern ssize_t readv (int __fd, const struct iovec *__iovec, int __count); extern ssize_t writev (int __fd, const struct iovec *__iovec, int __count); #line 29 "/usr/include/sys/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 31 "/usr/include/sys/socket.h" #line 1 "/usr/include/bits/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 31 "/usr/include/bits/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 7 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "/usr/include/bits/posix1_lim.h" #line 1 "/usr/include/bits/local_lim.h" #line 34 "/usr/include/bits/local_lim.h" #line 1 "/usr/include/linux/limits.h" #line 17 "/usr/include/linux/limits.h" #line 37 "/usr/include/bits/local_lim.h" #line 154 "/usr/include/bits/posix1_lim.h" #line 62 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "/usr/include/bits/posix2_lim.h" #line 87 "/usr/include/bits/posix2_lim.h" #line 66 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 33 "/usr/include/bits/socket.h" typedef __socklen_t socklen_t; enum __socket_type { SOCK_STREAM = 1, SOCK_DGRAM = 2, SOCK_RAW = 3, SOCK_RDM = 4, SOCK_SEQPACKET = 5, SOCK_PACKET = 10 }; #line 96 "/usr/include/bits/socket.h" #line 130 "/usr/include/bits/socket.h" #line 142 "/usr/include/bits/socket.h" #line 1 "/usr/include/bits/sockaddr.h" typedef unsigned short int sa_family_t; #line 148 "/usr/include/bits/socket.h" struct sockaddr { sa_family_t sa_family; char sa_data[14]; }; #line 166 "/usr/include/bits/socket.h" struct sockaddr_storage { sa_family_t ss_family; __uint64_t __ss_align; char __ss_padding[(128 - (2 * sizeof (__uint64_t)))]; }; enum { MSG_OOB = 0x01, MSG_PEEK = 0x02, MSG_DONTROUTE = 0x04, #line 189 "/usr/include/bits/socket.h" MSG_CTRUNC = 0x08, MSG_PROXY = 0x10, MSG_TRUNC = 0x20, MSG_DONTWAIT = 0x40, MSG_EOR = 0x80, MSG_WAITALL = 0x100, MSG_FIN = 0x200, MSG_SYN = 0x400, MSG_CONFIRM = 0x800, MSG_RST = 0x1000, MSG_ERRQUEUE = 0x2000, MSG_NOSIGNAL = 0x4000, MSG_MORE = 0x8000, MSG_CMSG_CLOEXEC = 0x40000000 }; struct msghdr { void *msg_name; socklen_t msg_namelen; struct iovec *msg_iov; size_t msg_iovlen; void *msg_control; size_t msg_controllen; int msg_flags; }; struct cmsghdr { size_t cmsg_len; int cmsg_level; int cmsg_type; unsigned char __cmsg_data []; }; #line 272 "/usr/include/bits/socket.h" extern struct cmsghdr *__cmsg_nxthdr (struct msghdr *__mhdr, struct cmsghdr *__cmsg) ; #line 297 "/usr/include/bits/socket.h" enum { SCM_RIGHTS = 0x01 , SCM_CREDENTIALS = 0x02 }; struct ucred { pid_t pid; uid_t uid; gid_t gid; }; #line 1 "/usr/include/asm/socket.h" #line 1 "/usr/include/asm-s64fx/socket.h" #line 1 "/usr/include/asm/sockios.h" #line 1 "/usr/include/asm-s64fx/sockios.h" #line 12 "/usr/include/asm-s64fx/sockios.h" #line 6 "/usr/include/asm/sockios.h" #line 6 "/usr/include/asm-s64fx/socket.h" #line 19 "/usr/include/asm-s64fx/socket.h" #line 26 "/usr/include/asm-s64fx/socket.h" #line 36 "/usr/include/asm-s64fx/socket.h" #line 6 "/usr/include/asm/socket.h" #line 321 "/usr/include/bits/socket.h" struct linger { int l_onoff; int l_linger; }; #line 37 "/usr/include/sys/socket.h" struct osockaddr { unsigned short int sa_family; unsigned char sa_data[14]; }; enum { SHUT_RD = 0, SHUT_WR, SHUT_RDWR }; #line 96 "/usr/include/sys/socket.h" extern int socket (int __domain, int __type, int __protocol) ; extern int socketpair (int __domain, int __type, int __protocol, int __fds[2]) ; extern int bind (int __fd, const struct sockaddr * __addr, socklen_t __len) ; extern int getsockname (int __fd, struct sockaddr * __addr, socklen_t * __len) ; extern int connect (int __fd, const struct sockaddr * __addr, socklen_t __len); extern int getpeername (int __fd, struct sockaddr * __addr, socklen_t * __len) ; extern ssize_t send (int __fd, const void *__buf, size_t __n, int __flags); extern ssize_t recv (int __fd, void *__buf, size_t __n, int __flags); extern ssize_t sendto (int __fd, const void *__buf, size_t __n, int __flags, const struct sockaddr * __addr, socklen_t __addr_len); extern ssize_t recvfrom (int __fd, void * __buf, size_t __n, int __flags, struct sockaddr * __addr, socklen_t * __addr_len); extern ssize_t sendmsg (int __fd, const struct msghdr *__message, int __flags); extern ssize_t recvmsg (int __fd, struct msghdr *__message, int __flags); extern int getsockopt (int __fd, int __level, int __optname, void * __optval, socklen_t * __optlen) ; extern int setsockopt (int __fd, int __level, int __optname, const void *__optval, socklen_t __optlen) ; extern int listen (int __fd, int __n) ; extern int accept (int __fd, struct sockaddr * __addr, socklen_t * __addr_len); extern int shutdown (int __fd, int __how) ; extern int sockatmark (int __fd) ; extern int isfdtype (int __fd, int __fdtype) ; #line 26 "/usr/include/netinet/in.h" enum { IPPROTO_IP = 0, IPPROTO_HOPOPTS = 0, IPPROTO_ICMP = 1, IPPROTO_IGMP = 2, IPPROTO_IPIP = 4, IPPROTO_TCP = 6, IPPROTO_EGP = 8, IPPROTO_PUP = 12, IPPROTO_UDP = 17, IPPROTO_IDP = 22, IPPROTO_TP = 29, IPPROTO_IPV6 = 41, IPPROTO_ROUTING = 43, IPPROTO_FRAGMENT = 44, IPPROTO_RSVP = 46, IPPROTO_GRE = 47, IPPROTO_ESP = 50, IPPROTO_AH = 51, IPPROTO_ICMPV6 = 58, IPPROTO_NONE = 59, IPPROTO_DSTOPTS = 60, IPPROTO_MTP = 92, IPPROTO_ENCAP = 98, IPPROTO_PIM = 103, IPPROTO_COMP = 108, IPPROTO_SCTP = 132, IPPROTO_RAW = 255, IPPROTO_MAX }; typedef uint16_t in_port_t; enum { IPPORT_ECHO = 7, IPPORT_DISCARD = 9, IPPORT_SYSTAT = 11, IPPORT_DAYTIME = 13, IPPORT_NETSTAT = 15, IPPORT_FTP = 21, IPPORT_TELNET = 23, IPPORT_SMTP = 25, IPPORT_TIMESERVER = 37, IPPORT_NAMESERVER = 42, IPPORT_WHOIS = 43, IPPORT_MTP = 57, IPPORT_TFTP = 69, IPPORT_RJE = 77, IPPORT_FINGER = 79, IPPORT_TTYLINK = 87, IPPORT_SUPDUP = 95, IPPORT_EXECSERVER = 512, IPPORT_LOGINSERVER = 513, IPPORT_CMDSERVER = 514, IPPORT_EFSSERVER = 520, IPPORT_BIFFUDP = 512, IPPORT_WHOSERVER = 513, IPPORT_ROUTESERVER = 520, IPPORT_RESERVED = 1024, IPPORT_USERRESERVED = 5000 }; typedef uint32_t in_addr_t; struct in_addr { in_addr_t s_addr; }; struct in6_addr { union { uint8_t u6_addr8[16]; uint16_t u6_addr16[8]; uint32_t u6_addr32[4]; } in6_u; }; extern const struct in6_addr in6addr_any; extern const struct in6_addr in6addr_loopback; struct sockaddr_in { sa_family_t sin_family; in_port_t sin_port; struct in_addr sin_addr; unsigned char sin_zero[sizeof (struct sockaddr) - (sizeof (unsigned short int)) - sizeof (in_port_t) - sizeof (struct in_addr)]; }; struct sockaddr_in6 { sa_family_t sin6_family; in_port_t sin6_port; uint32_t sin6_flowinfo; struct in6_addr sin6_addr; uint32_t sin6_scope_id; }; struct ip_mreq { struct in_addr imr_multiaddr; struct in_addr imr_interface; }; struct ip_mreq_source { struct in_addr imr_multiaddr; struct in_addr imr_interface; struct in_addr imr_sourceaddr; }; struct ipv6_mreq { struct in6_addr ipv6mr_multiaddr; unsigned int ipv6mr_interface; }; struct group_req { uint32_t gr_interface; struct sockaddr_storage gr_group; }; struct group_source_req { uint32_t gsr_interface; struct sockaddr_storage gsr_group; struct sockaddr_storage gsr_source; }; struct ip_msfilter { struct in_addr imsf_multiaddr; struct in_addr imsf_interface; uint32_t imsf_fmode; uint32_t imsf_numsrc; struct in_addr imsf_slist[1]; }; struct group_filter { uint32_t gf_interface; struct sockaddr_storage gf_group; uint32_t gf_fmode; uint32_t gf_numsrc; struct sockaddr_storage gf_slist[1]; }; #line 1 "/usr/include/bits/in.h" #line 53 "/usr/include/bits/in.h" #line 65 "/usr/include/bits/in.h" struct ip_opts { struct in_addr ip_dst; char ip_opts[40]; }; struct ip_mreqn { struct in_addr imr_multiaddr; struct in_addr imr_address; int imr_ifindex; }; struct in_pktinfo { int ipi_ifindex; struct in_addr ipi_spec_dst; struct in_addr ipi_addr; }; #line 115 "/usr/include/bits/in.h" #line 135 "/usr/include/bits/in.h" #line 147 "/usr/include/bits/in.h" #line 344 "/usr/include/netinet/in.h" extern uint32_t ntohl (uint32_t __netlong) ; extern uint16_t ntohs (uint16_t __netshort) ; extern uint32_t htonl (uint32_t __hostlong) ; extern uint16_t htons (uint16_t __hostshort) ; #line 1 "/usr/include/bits/byteswap.h" static unsigned short int __bswap_16 (unsigned short int __bsx) { return ((((__bsx) >> 8) & 0xffu) | (((__bsx) & 0xffu) << 8)); } static unsigned int __bswap_32 (unsigned int __bsx) { return ((((__bsx) & 0xff000000u) >> 24) | (((__bsx) & 0x00ff0000u) >> 8) | (((__bsx) & 0x0000ff00u) << 8) | (((__bsx) & 0x000000ffu) << 24)); } #line 86 "/usr/include/bits/byteswap.h" #line 364 "/usr/include/netinet/in.h" #line 385 "/usr/include/netinet/in.h" extern int bindresvport (int __sockfd, struct sockaddr_in *__sock_in) ; extern int bindresvport6 (int __sockfd, struct sockaddr_in6 *__sock_in) ; struct in6_pktinfo { struct in6_addr ipi6_addr; unsigned int ipi6_ifindex; }; struct ip6_mtuinfo { struct sockaddr_in6 ip6m_addr; uint32_t ip6m_mtu; }; #line 548 "/usr/include/netinet/in.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_NETINET_IN_H" to "1" ================================================================================ TEST checkRecursiveMacros from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:218) TESTING: checkRecursiveMacros from config.headers(config/BuildSystem/config/headers.py:218) Checks that the preprocessor allows recursive macros, and if not defines HAVE_BROKEN_RECURSIVE_MACRO Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" void a(int i, int j) {} #define a(b) a(b,__LINE__) int main() { a(0); ; return 0; } ================================================================================ TEST configureCacheDetails from config.utilities.cacheDetails(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/cacheDetails.py:78) TESTING: configureCacheDetails from config.utilities.cacheDetails(config/BuildSystem/config/utilities/cacheDetails.py:78) Try to determine the size and associativity of the cache. Pushing language C All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include long getconf_LEVEL1_DCACHE_SIZE() { long val = sysconf(_SC_LEVEL1_DCACHE_SIZE); return (16 <= val && val <= 2147483647) ? val : 32768; } int main() { ; return 0; } Popping language C Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include long getconf_LEVEL1_DCACHE_SIZE() { long val = sysconf(_SC_LEVEL1_DCACHE_SIZE); return (16 <= val && val <= 2147483647) ? val : 32768; } int main() { FILE *output = fopen("conftestval","w"); if (!output) return 1; fprintf(output,"%ld",getconf_LEVEL1_DCACHE_SIZE()); fclose(output);; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest Popping language C Defined "LEVEL1_DCACHE_SIZE" to "32768" Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include long getconf_LEVEL1_DCACHE_LINESIZE() { long val = sysconf(_SC_LEVEL1_DCACHE_LINESIZE); return (16 <= val && val <= 2147483647) ? val : 32; } int main() { FILE *output = fopen("conftestval","w"); if (!output) return 1; fprintf(output,"%ld",getconf_LEVEL1_DCACHE_LINESIZE()); fclose(output);; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest Popping language C Defined "LEVEL1_DCACHE_LINESIZE" to "32" Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include long getconf_LEVEL1_DCACHE_ASSOC() { long val = sysconf(_SC_LEVEL1_DCACHE_ASSOC); return (0 <= val && val <= 2147483647) ? val : 2; } int main() { FILE *output = fopen("conftestval","w"); if (!output) return 1; fprintf(output,"%ld",getconf_LEVEL1_DCACHE_ASSOC()); fclose(output);; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest Popping language C Defined "LEVEL1_DCACHE_ASSOC" to "0" ================================================================================ TEST check_siginfo_t from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:46) TESTING: check_siginfo_t from config.types(config/BuildSystem/config/types.py:46) Checks if siginfo_t exists in signal.h. This check is for windows, and C89 check. Checking for type: siginfo_t All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c", line 13: warning: variable "a" was declared but never referenced siginfo_t a;; ^ Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { siginfo_t a;; return 0; } siginfo_t found Defined "HAVE_SIGINFO_T" to "1" ================================================================================ TEST check__int64 from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:52) TESTING: check__int64 from config.types(config/BuildSystem/config/types.py:52) Checks if __int64 exists. This is primarily for windows. Checking for type: __int64 Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Possible ERROR while running compiler: exit code 512 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c", line 13: error: identifier "__int64" is undefined __int64 a;; ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { __int64 a;; return 0; } __int64 found ================================================================================ TEST checkSizeTypes from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:58) TESTING: checkSizeTypes from config.types(config/BuildSystem/config/types.py:58) Checks for types associated with sizes, such as size_t. Checking for type: size_t Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c", line 13: warning: variable "a" was declared but never referenced size_t a;; ^ Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { size_t a;; return 0; } size_t found ================================================================================ TEST checkFileTypes from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:68) TESTING: checkFileTypes from config.types(config/BuildSystem/config/types.py:68) Checks for types associated with files, such as mode_t, off_t, etc. Checking for type: mode_t Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c", line 13: warning: variable "a" was declared but never referenced mode_t a;; ^ Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { mode_t a;; return 0; } mode_t found Checking for type: off_t Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c", line 13: warning: variable "a" was declared but never referenced off_t a;; ^ Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { off_t a;; return 0; } off_t found ================================================================================ TEST checkIntegerTypes from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:63) TESTING: checkIntegerTypes from config.types(config/BuildSystem/config/types.py:63) Checks for types associated with integers, such as int32_t. Checking for type: int32_t Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c", line 13: warning: variable "a" was declared but never referenced int32_t a;; ^ Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { int32_t a;; return 0; } int32_t found ================================================================================ TEST checkPID from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:74) TESTING: checkPID from config.types(config/BuildSystem/config/types.py:74) Checks for pid_t, and defines it if necessary Checking for type: pid_t Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c", line 13: warning: variable "a" was declared but never referenced pid_t a;; ^ Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { pid_t a;; return 0; } pid_t found ================================================================================ TEST checkUID from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:78) TESTING: checkUID from config.types(config/BuildSystem/config/types.py:78) Checks for uid_t and gid_t, and defines them if necessary Source: #include "confdefs.h" #include "conffix.h" #include Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c" #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; typedef char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c" ================================================================================ TEST checkSignal from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:85) TESTING: checkSignal from config.types(config/BuildSystem/config/types.py:85) Checks the return type of signal() and defines RETSIGTYPE to that type name Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #ifdef signal #undef signal #endif #ifdef __cplusplus extern "C" void (*signal (int, void(*)(int)))(int); #else void (*signal())(); #endif int main() { ; return 0; } Defined "RETSIGTYPE" to "void" ================================================================================ TEST checkC99Complex from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:106) TESTING: checkC99Complex from config.types(config/BuildSystem/config/types.py:106) Check for complex numbers in in C99 std Note that since PETSc source code uses _Complex we test specifically for that, not complex Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c", line 6: warning: variable "x" was set but never used double _Complex x; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { double _Complex x; x = I; ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c", line 6: warning: variable "x" was set but never used double _Complex x; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { double _Complex x; x = I; ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_C99_COMPLEX" to "1" ================================================================================ TEST checkCxxComplex from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:117) TESTING: checkCxxComplex from config.types(config/BuildSystem/config/types.py:117) Check for complex numbers in namespace std Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { std::complex x; ; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_CXX_COMPLEX" to "1" Popping language Cxx ================================================================================ TEST checkFortranKind from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:138) TESTING: checkFortranKind from config.types(config/BuildSystem/config/types.py:138) Checks whether selected_int_kind etc work USE_FORTRANKIND Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.F Possible ERROR while running compiler: stderr: Fortran diagnostic messages: program name(main) jwd2006i-i "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.F", line 3: 'i' is declared but never referenced. jwd2006i-i "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.F", line 4: 'd' is declared but never referenced. Source: program main integer(kind=selected_int_kind(10)) i real(kind=selected_real_kind(10)) d end Defined "USE_FORTRANKIND" to "1" Popping language FC ================================================================================ TEST checkConst from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:150) TESTING: checkConst from config.types(config/BuildSystem/config/types.py:150) Checks for working const, and if not found defines it to empty string Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c", line 25: warning: variable "x" is used before its value is set if (x[0]); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c", line 30: warning: variable "t" is used before its value is set *t++ = 0; ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c", line 46: warning: variable "b" is used before its value is set struct s *b; b->j = 5; ^ Source: #include "confdefs.h" #include "conffix.h" int main() { /* Ultrix mips cc rejects this. */ typedef int charset[2]; const charset x; /* SunOS 4.1.1 cc rejects this. */ char const *const *ccp; char **p; /* NEC SVR4.0.2 mips cc rejects this. */ struct point {int x, y;}; static struct point const zero = {0,0}; /* AIX XL C 1.02.0.0 rejects this. It does not let you subtract one const X* pointer from another in an arm of an if-expression whose if-part is not a constant expression */ const char *g = "string"; ccp = &g + (g ? g-g : 0); /* HPUX 7.0 cc rejects these. */ ++ccp; p = (char**) ccp; ccp = (char const *const *) p; /* This section avoids unused variable warnings */ if (zero.x); if (x[0]); { /* SCO 3.2v4 cc rejects this. */ char *t; char const *s = 0 ? (char *) 0 : (char const *) 0; *t++ = 0; if (*s); } { /* Someone thinks the Sun supposedly-ANSI compiler will reject this. */ int x[] = {25, 17}; const int *foo = &x[0]; ++foo; } { /* Sun SC1.0 ANSI compiler rejects this -- but not the above. */ typedef const int *iptr; iptr p = 0; ++p; } { /* AIX XL C 1.02.0.0 rejects this saying "k.c", line 2.27: 1506-025 (S) Operand must be a modifiable lvalue. */ struct s { int j; const int *ap[3]; }; struct s *b; b->j = 5; } { /* ULTRIX-32 V3.1 (Rev 9) vcc rejects this */ const int foo = 10; /* Get rid of unused variable warning */ if (foo); } ; return 0; } ================================================================================ TEST checkEndian from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:206) TESTING: checkEndian from config.types(config/BuildSystem/config/types.py:206) If the machine is big endian, defines WORDS_BIGENDIAN Defined "WORDS_BIGENDIAN" to "1" ================================================================================ TEST checkSizeof from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:259) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:259) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: char Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(char)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Popping language C Defined "SIZEOF_CHAR" to "1" ================================================================================ TEST checkSizeof from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:259) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:259) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: void * Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(void *)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Popping language C Defined "SIZEOF_VOID_P" to "8" ================================================================================ TEST checkSizeof from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:259) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:259) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: short Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(short)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Popping language C Defined "SIZEOF_SHORT" to "2" ================================================================================ TEST checkSizeof from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:259) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:259) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: int Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(int)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Popping language C Defined "SIZEOF_INT" to "4" ================================================================================ TEST checkSizeof from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:259) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:259) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: long Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(long)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Popping language C Defined "SIZEOF_LONG" to "8" ================================================================================ TEST checkSizeof from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:259) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:259) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: long long Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(long long)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Popping language C Defined "SIZEOF_LONG_LONG" to "8" ================================================================================ TEST checkSizeof from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:259) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:259) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: float Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(float)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Popping language C Defined "SIZEOF_FLOAT" to "4" ================================================================================ TEST checkSizeof from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:259) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:259) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: double Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(double)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Popping language C Defined "SIZEOF_DOUBLE" to "8" ================================================================================ TEST checkSizeof from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:259) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:259) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: size_t Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(size_t)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Popping language C Defined "SIZEOF_SIZE_T" to "8" ================================================================================ TEST checkBitsPerByte from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:310) TESTING: checkBitsPerByte from config.types(config/BuildSystem/config/types.py:310) Determine the nubmer of bits per byte and define BITS_PER_BYTE Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #if STDC_HEADERS #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); char val[2]; int i = 0; if (!f) exit(1); val[0]='\1'; val[1]='\0'; while(val[0]) {val[0] <<= 1; i++;} fprintf(f, "%d\n", i); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Defined "BITS_PER_BYTE" to "8" ================================================================================ TEST checkVisibility from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:356) TESTING: checkVisibility from config.types(config/BuildSystem/config/types.py:356) ================================================================================ TEST configureMemAlign from PETSc.options.memAlign(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/memAlign.py:30) TESTING: configureMemAlign from PETSc.options.memAlign(config/PETSc/options/memAlign.py:30) Choose alignment Defined "MEMALIGN" to "16" Memory alignment is 16 ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [socket] in library ['socket', 'nsl'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char socket(); static void _check_socket() { socket(); } int main() { _check_socket();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -lsocket -lnsl -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lsocket Popping language C ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [handle_sigfpes] in library ['fpe'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char handle_sigfpes(); static void _check_handle_sigfpes() { handle_sigfpes(); } int main() { _check_handle_sigfpes();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -lfpe -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lfpe Popping language C ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [socket] in library ['socket', 'nsl'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char socket(); static void _check_socket() { socket(); } int main() { _check_socket();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -lsocket -lnsl -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lsocket Popping language C ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [handle_sigfpes] in library ['fpe'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char handle_sigfpes(); static void _check_handle_sigfpes() { handle_sigfpes(); } int main() { _check_handle_sigfpes();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -lfpe -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lfpe Popping language C ================================================================================ TEST checkMath from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:251) TESTING: checkMath from config.libraries(config/BuildSystem/config/libraries.py:251) Check for sin() in libm, the math library Checking for functions [sin floor log10 pow] in library [''] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c", line 5: warning: variable "y" was set but never used static void _check_sin() { double x = 0,y; y = sin(x); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c", line 8: warning: variable "y" was set but never used static void _check_floor() { double x = 0,y; y = floor(x); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c", line 11: warning: variable "y" was set but never used static void _check_log10() { double x = 0,y; y = log10(x); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c", line 14: warning: variable "y" was set but never used static void _check_pow() { double x = 0,y ; y = pow(x, x); ^ Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double sin(double); static void _check_sin() { double x = 0,y; y = sin(x); ; } double floor(double); static void _check_floor() { double x = 0,y; y = floor(x); ; } double log10(double); static void _check_log10() { double x = 0,y; y = log10(x); ; } double pow(double, double); static void _check_pow() { double x = 0,y ; y = pow(x, x); ; } int main() { _check_sin(); _check_floor(); _check_log10(); _check_pow();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Math functions are linked in by default ================================================================================ TEST checkMathErf from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:267) TESTING: checkMathErf from config.libraries(config/BuildSystem/config/libraries.py:267) Check for erf() in libm, the math library Checking for functions [erf] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c", line 5: warning: variable "y" was set but never used static void _check_erf() { double x = 0,y; y = erf(x); ^ Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double erf(double); static void _check_erf() { double x = 0,y; y = erf(x); ; } int main() { _check_erf();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C erf() found Defined "HAVE_ERF" to "1" ================================================================================ TEST checkMathTgamma from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:276) TESTING: checkMathTgamma from config.libraries(config/BuildSystem/config/libraries.py:276) Check for tgama() in libm, the math library Checking for functions [tgamma] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c", line 5: warning: variable "y" was set but never used static void _check_tgamma() { double x = 0,y; y = tgamma(x); ^ Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double tgamma(double); static void _check_tgamma() { double x = 0,y; y = tgamma(x); ; } int main() { _check_tgamma();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C tgamma() found Defined "HAVE_TGAMMA" to "1" ================================================================================ TEST checkMathFenv from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:285) TESTING: checkMathFenv from config.libraries(config/BuildSystem/config/libraries.py:285) Checks if can be used with FE_DFL_ENV Checking for functions [fesetenv] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_fesetenv() { fesetenv(FE_DFL_ENV);; } int main() { _check_fesetenv();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Defined "HAVE_FENV_H" to "1" ================================================================================ TEST checkMathLog2 from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:293) TESTING: checkMathLog2 from config.libraries(config/BuildSystem/config/libraries.py:293) Check for log2() in libm, the math library Checking for functions [log2] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c", line 5: warning: variable "y" was set but never used static void _check_log2() { double x = 1,y; y = log2(x); ^ Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double log2(double); static void _check_log2() { double x = 1,y; y = log2(x); ; } int main() { _check_log2();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C log2() found Defined "HAVE_LOG2" to "1" ================================================================================ TEST checkCompression from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:302) TESTING: checkCompression from config.libraries(config/BuildSystem/config/libraries.py:302) Check for libz, the compression library Checking for functions [compress uncompress] in library [''] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c", line 5: warning: variable "ret" was set but never used static void _check_compress() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = compress(dest, &destLen, source, sourceLen); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c", line 8: warning: variable "ret" was set but never used static void _check_uncompress() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = uncompress(dest, &destLen, source, sourceLen); ^ Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ int compress(char *dest, unsigned long *destLen, const char *source, unsigned long sourceLen); static void _check_compress() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = compress(dest, &destLen, source, sourceLen); ; } int uncompress(char *dest, unsigned long *destLen, const char *source, unsigned long sourceLen); static void _check_uncompress() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = uncompress(dest, &destLen, source, sourceLen); ; } int main() { _check_compress(); _check_uncompress();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o: In function `_check_compress': conftest.c:(.text+0x48): undefined reference to `compress' /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o: In function `_check_uncompress': conftest.c:(.text+0xa8): undefined reference to `uncompress' Popping language C Checking for functions [compress uncompress] in library ['z'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c", line 5: warning: variable "ret" was set but never used static void _check_compress() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = compress(dest, &destLen, source, sourceLen); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c", line 8: warning: variable "ret" was set but never used static void _check_uncompress() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = uncompress(dest, &destLen, source, sourceLen); ^ Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ int compress(char *dest, unsigned long *destLen, const char *source, unsigned long sourceLen); static void _check_compress() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = compress(dest, &destLen, source, sourceLen); ; } int uncompress(char *dest, unsigned long *destLen, const char *source, unsigned long sourceLen); static void _check_uncompress() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = uncompress(dest, &destLen, source, sourceLen); ; } int main() { _check_compress(); _check_uncompress();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -lz -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_LIBZ" to "1" Popping language C Using libz for the compression library ================================================================================ TEST checkRealtime from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:323) TESTING: checkRealtime from config.libraries(config/BuildSystem/config/libraries.py:323) Check for presence of clock_gettime() in realtime library (POSIX Realtime extensions) Checking for functions [clock_gettime] in library [''] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_clock_gettime() { struct timespec tp; clock_gettime(CLOCK_REALTIME,&tp);; } int main() { _check_clock_gettime();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C realtime functions are linked in by default ================================================================================ TEST checkDynamic from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:339) TESTING: checkDynamic from config.libraries(config/BuildSystem/config/libraries.py:339) Check for the header and libraries necessary for dynamic library manipulation Checking for functions [dlopen] in library ['dl'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dlopen(); static void _check_dlopen() { dlopen(); } int main() { _check_dlopen();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ldl -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_LIBDL" to "1" Popping language C Checking for header: dlfcn.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/dlfcn.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/dlfcn.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 27 "/usr/include/dlfcn.h" #line 1 "/usr/include/bits/dlfcn.h" #line 30 "/usr/include/dlfcn.h" #line 52 "/usr/include/dlfcn.h" extern void *dlopen (const char *__file, int __mode) ; extern int dlclose (void *__handle) ; extern void *dlsym (void * __handle, const char * __name) ; #line 80 "/usr/include/dlfcn.h" extern char *dlerror (void) ; #line 188 "/usr/include/dlfcn.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_DLFCN_H" to "1" ================================================================================ TEST configureLibraryOptions from PETSc.options.libraryOptions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/libraryOptions.py:37) TESTING: configureLibraryOptions from PETSc.options.libraryOptions(config/PETSc/options/libraryOptions.py:37) Sets PETSC_USE_DEBUG, PETSC_USE_INFO, PETSC_USE_LOG, PETSC_USE_CTABLE and PETSC_USE_FORTRAN_KERNELS Defined "USE_LOG" to "1" Defined "USE_DEBUG" to "1" Defined "USE_INFO" to "1" Defined "USE_CTABLE" to "1" **********Checking if running on BGL/IBM detected Checking for functions [bgl_perfctr_void] in library [''] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char bgl_perfctr_void(); static void _check_bgl_perfctr_void() { bgl_perfctr_void(); } int main() { _check_bgl_perfctr_void();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o: In function `_check_bgl_perfctr_void': conftest.c:(.text+0x4): undefined reference to `bgl_perfctr_void' Popping language C Checking for functions [ADIOI_BGL_Open] in library [''] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ADIOI_BGL_Open(); static void _check_ADIOI_BGL_Open() { ADIOI_BGL_Open(); } int main() { _check_ADIOI_BGL_Open();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o: In function `_check_ADIOI_BGL_Open': conftest.c:(.text+0x4): undefined reference to `ADIOI_BGL_Open' Popping language C *********BGL/IBM test failure Defined "USE_BACKWARD_LOOP" to "1" Defined "Alignx(a,b)" to " " ================================================================================ TEST configureISColorValueType from PETSc.options.libraryOptions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/libraryOptions.py:87) TESTING: configureISColorValueType from PETSc.options.libraryOptions(config/PETSc/options/libraryOptions.py:87) Sets PETSC_IS_COLOR_VALUE_TYPE, MPIU_COLORING_VALUE, IS_COLORING_MAX required by ISColor Defined "MPIU_COLORING_VALUE" to "MPI_UNSIGNED_SHORT" Defined "IS_COLORING_MAX" to "65535" Defined "IS_COLOR_VALUE_TYPE" to "short" Defined "IS_COLOR_VALUE_TYPE_SIZE" to "PETSC_SIZEOF_SHORT" ================================================================================ TEST configureCPURelax from config.atomics(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/atomics.py:17) TESTING: configureCPURelax from config.atomics(config/BuildSystem/config/atomics.py:17) Definitions for cpu relax assembly instructions All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics/conftest.c Possible ERROR while running compiler: exit code 256 stderr: .//FCCpMjRiH.s: Assembler messages: .//FCCpMjRiH.s:15: Error: Unknown opcode: `rep' Source: #include "confdefs.h" #include "conffix.h" int main() { asm volatile("rep; nop" ::: "memory");; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics/conftest.c Possible ERROR while running compiler: exit code 512 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics/conftest.c", line 5: error: identifier "HMT_low" is undefined do { HMT_low; HMT_medium; __asm__ __volatile__ ("":::"memory"); } while (0); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics/conftest.c", line 5: error: identifier "HMT_medium" is undefined do { HMT_low; HMT_medium; __asm__ __volatile__ ("":::"memory"); } while (0); ^ 2 errors detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics/conftest.c". Source: #include "confdefs.h" #include "conffix.h" int main() { do { HMT_low; HMT_medium; __asm__ __volatile__ ("":::"memory"); } while (0); return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { __asm__ __volatile__ ("":::"memory");; return 0; } Defined "CPU_RELAX()" to "__asm__ __volatile__ ("":::"memory")" ================================================================================ TEST configureMemoryBarriers from config.atomics(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/atomics.py:36) TESTING: configureMemoryBarriers from config.atomics(config/BuildSystem/config/atomics.py:36) Definitions for memory barrier instructions Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics/conftest.c Possible ERROR while running compiler: exit code 256 stderr: .//FCCCrePQf.s: Assembler messages: .//FCCCrePQf.s:15: Error: Unknown opcode: `mfence' Source: #include "confdefs.h" #include "conffix.h" int main() { asm volatile("mfence":::"memory"); return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics/conftest.c Possible ERROR while running compiler: exit code 256 stderr: .//FCCyVCPFq.s: Assembler messages: .//FCCyVCPFq.s:15: Error: Unknown opcode: `lfence' Source: #include "confdefs.h" #include "conffix.h" int main() { asm volatile("lfence":::"memory"); return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics/conftest.c Possible ERROR while running compiler: exit code 256 stderr: .//FCCshCCwG.s: Assembler messages: .//FCCshCCwG.s:15: Error: Unknown opcode: `sfence' Source: #include "confdefs.h" #include "conffix.h" int main() { asm volatile("sfence":::"memory"); return 0; } ================================================================================ TEST checkMemcmp from config.functions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/functions.py:110) TESTING: checkMemcmp from config.functions(config/BuildSystem/config/functions.py:110) Check for 8-bit clean memcmp Making executable to test memcmp() All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include void exit(int); int main() { char c0 = 0x40; char c1 = (char) 0x80; char c2 = (char) 0x81; exit(memcmp(&c0, &c2, 1) < 0 && memcmp(&c1, &c2, 1) < 0 ? 0 : 1); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest ================================================================================ TEST checkSysinfo from config.functions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/functions.py:135) TESTING: checkSysinfo from config.functions(config/BuildSystem/config/functions.py:135) Check whether sysinfo takes three arguments, and if it does define HAVE_SYSINFO_3ARG Checking for functions [sysinfo] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sysinfo(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_sysinfo) || defined (__stub___sysinfo) sysinfo_will_always_fail_with_ENOSYS(); #else sysinfo(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_SYSINFO" to "1" Checking for header: linux/kernel.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/linux/kernel.h" struct sysinfo { long uptime; unsigned long loads[3]; unsigned long totalram; unsigned long freeram; unsigned long sharedram; unsigned long bufferram; unsigned long totalswap; unsigned long freeswap; unsigned short procs; unsigned short pad; unsigned long totalhigh; unsigned long freehigh; unsigned int mem_unit; char _f[20-2*sizeof(long)-sizeof(int)]; }; #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_LINUX_KERNEL_H" to "1" Checking for header: sys/sysinfo.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/sys/sysinfo.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/sys/sysinfo.h" #line 1 "/usr/include/linux/kernel.h" struct sysinfo { long uptime; unsigned long loads[3]; unsigned long totalram; unsigned long freeram; unsigned long sharedram; unsigned long bufferram; unsigned long totalswap; unsigned long freeswap; unsigned short procs; unsigned short pad; unsigned long totalhigh; unsigned long freehigh; unsigned int mem_unit; char _f[20-2*sizeof(long)-sizeof(int)]; }; #line 26 "/usr/include/sys/sysinfo.h" extern int sysinfo (struct sysinfo *__info) ; extern int get_nprocs_conf (void) ; extern int get_nprocs (void) ; extern long int get_phys_pages (void) ; extern long int get_avphys_pages (void) ; #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_SYSINFO_H" to "1" Checking for header: sys/systeminfo.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "sys/systeminfo.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "sys/systeminfo.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "sys/systeminfo.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c".: Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c", line 13: catastrophic error: #error directive: "Cannot check sysinfo without special headers" # error "Cannot check sysinfo without special headers" ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" #ifdef HAVE_LINUX_KERNEL_H # include # include # ifdef HAVE_SYS_SYSINFO_H # include # endif #elif defined(HAVE_SYS_SYSTEMINFO_H) # include #else # error "Cannot check sysinfo without special headers" #endif int main() { char buf[10]; long count=10; sysinfo(1, buf, count); ; return 0; } Compile failed inside link ================================================================================ TEST checkVPrintf from config.functions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/functions.py:158) TESTING: checkVPrintf from config.functions(config/BuildSystem/config/functions.py:158) Checks whether vprintf requires a char * last argument, and if it does defines HAVE_VPRINTF_CHAR Checking for functions [vprintf] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char vprintf(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_vprintf) || defined (__stub___vprintf) vprintf_will_always_fail_with_ENOSYS(); #else vprintf(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_VPRINTF" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c", line 8: warning: variable "Argp" is used before its value is set vprintf( "%d", Argp ); ^ Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { va_list Argp; vprintf( "%d", Argp ); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl ================================================================================ TEST checkVFPrintf from config.functions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/functions.py:165) TESTING: checkVFPrintf from config.functions(config/BuildSystem/config/functions.py:165) Checks whether vfprintf requires a char * last argument, and if it does defines HAVE_VFPRINTF_CHAR Checking for functions [vfprintf] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char vfprintf(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_vfprintf) || defined (__stub___vfprintf) vfprintf_will_always_fail_with_ENOSYS(); #else vfprintf(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_VFPRINTF" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c", line 8: warning: variable "Argp" is used before its value is set vfprintf(stdout, "%d", Argp ); ^ Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { va_list Argp; vfprintf(stdout, "%d", Argp ); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl ================================================================================ TEST checkVSNPrintf from config.functions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/functions.py:172) TESTING: checkVSNPrintf from config.functions(config/BuildSystem/config/functions.py:172) Checks whether vsnprintf requires a char * last argument, and if it does defines HAVE_VSNPRINTF_CHAR Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { _vsnprintf(0,0,0,0); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o: In function `main': conftest.c:(.text+0x34): undefined reference to `_vsnprintf' Checking for functions [vsnprintf] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char vsnprintf(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_vsnprintf) || defined (__stub___vsnprintf) vsnprintf_will_always_fail_with_ENOSYS(); #else vsnprintf(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_VSNPRINTF" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c", line 8: warning: variable "Argp" is used before its value is set vsnprintf(str,5, "%d", Argp ); ^ Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { va_list Argp;char str[6]; vsnprintf(str,5, "%d", Argp ); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl ================================================================================ TEST checkNanosleep from config.functions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/functions.py:206) TESTING: checkNanosleep from config.functions(config/BuildSystem/config/functions.py:206) Check for functional nanosleep() - as time.h behaves differently for different compiler flags - like -std=c89 Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { struct timespec tp; tp.tv_sec = 0; tp.tv_nsec = (long)(1e9); nanosleep(&tp,0); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_NANOSLEEP" to "1" ================================================================================ TEST checkSignalHandlerType from config.functions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/functions.py:182) TESTING: checkSignalHandlerType from config.functions(config/BuildSystem/config/functions.py:182) Checks the type of C++ signals handlers, and defines SIGNAL_CAST to the correct value Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include static void myhandler(int sig) {} int main() { signal(SIGFPE,myhandler); ; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "SIGNAL_CAST" to " " Popping language Cxx ================================================================================ TEST checkFreeReturnType from config.functions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/functions.py:192) TESTING: checkFreeReturnType from config.functions(config/BuildSystem/config/functions.py:192) Checks whether free returns void or int, and defines HAVE_FREE_RETURN_INT Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Possible ERROR while running compiler: exit code 512 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c", line 6: warning: variable "p" is used before its value is set int ierr; void *p; ierr = free(p); return 0; ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c", line 6: error: a value of type "void" cannot be assigned to an entity of type "int" int ierr; void *p; ierr = free(p); return 0; ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c", line 8: warning: statement is unreachable return 0; ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c", line 6: warning: variable "ierr" was set but never used int ierr; void *p; ierr = free(p); return 0; ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include int main() { int ierr; void *p; ierr = free(p); return 0; ; return 0; } Compile failed inside link ================================================================================ TEST checkVariableArgumentLists from config.functions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/functions.py:198) TESTING: checkVariableArgumentLists from config.functions(config/BuildSystem/config/functions.py:198) Checks whether the variable argument list functionality is working Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c", line 7: warning: variable "l2" is used before its value is set va_copy(l1, l2); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c", line 10: warning: statement is unreachable return 0; ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c", line 6: warning: variable "l1" was set but never used va_list l1, l2; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { va_list l1, l2; va_copy(l1, l2); return 0; ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_VA_COPY" to "1" ================================================================================ TEST checkClassify from config.functions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/functions.py:89) TESTING: checkClassify from config.functions(config/BuildSystem/config/functions.py:89) Recursive decompose to rapidly classify functions as found or missing To confirm that a function is missing, we require a compile/link failure with only that function in a compilation unit. In contrast, we can confirm that many functions are present by compiling them all together in a large compilation unit. We optimistically compile everything together, then trim all functions that were named in the error message and bisect the result. The trimming is only an optimization to increase the likelihood of a big-batch compile succeeding; we do not rely on the compiler naming missing functions. Checking for functions [rand getdomainname _sleep snprintf realpath dlsym bzero _getcwd getwd uname _lseek sleep _access lseek usleep dlclose gethostname clock get_nprocs access _snprintf dlerror mkstemp fork getpagesize sbreak memalign sigset getcwd gethostbyname gettimeofday readlink _set_output_format PXFGETARG sigaction strcasecmp dlopen drand48 socket memmove signal popen getrusage times time sysctlbyname stricmp] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char rand(); char getdomainname(); char _sleep(); char snprintf(); char realpath(); char dlsym(); char bzero(); char _getcwd(); char getwd(); char uname(); char _lseek(); char sleep(); char _access(); char lseek(); char usleep(); char dlclose(); char gethostname(); char clock(); char get_nprocs(); char access(); char _snprintf(); char dlerror(); char mkstemp(); char fork(); char getpagesize(); char sbreak(); char memalign(); char sigset(); char getcwd(); char gethostbyname(); char gettimeofday(); char readlink(); char _set_output_format(); char PXFGETARG(); char sigaction(); char strcasecmp(); char dlopen(); char drand48(); char socket(); char memmove(); char signal(); char popen(); char getrusage(); char times(); char time(); char sysctlbyname(); char stricmp(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_rand) || defined (__stub___rand) rand_will_always_fail_with_ENOSYS(); #else rand(); #endif #if defined (__stub_getdomainname) || defined (__stub___getdomainname) getdomainname_will_always_fail_with_ENOSYS(); #else getdomainname(); #endif #if defined (__stub__sleep) || defined (__stub____sleep) _sleep_will_always_fail_with_ENOSYS(); #else _sleep(); #endif #if defined (__stub_snprintf) || defined (__stub___snprintf) snprintf_will_always_fail_with_ENOSYS(); #else snprintf(); #endif #if defined (__stub_realpath) || defined (__stub___realpath) realpath_will_always_fail_with_ENOSYS(); #else realpath(); #endif #if defined (__stub_dlsym) || defined (__stub___dlsym) dlsym_will_always_fail_with_ENOSYS(); #else dlsym(); #endif #if defined (__stub_bzero) || defined (__stub___bzero) bzero_will_always_fail_with_ENOSYS(); #else bzero(); #endif #if defined (__stub__getcwd) || defined (__stub____getcwd) _getcwd_will_always_fail_with_ENOSYS(); #else _getcwd(); #endif #if defined (__stub_getwd) || defined (__stub___getwd) getwd_will_always_fail_with_ENOSYS(); #else getwd(); #endif #if defined (__stub_uname) || defined (__stub___uname) uname_will_always_fail_with_ENOSYS(); #else uname(); #endif #if defined (__stub__lseek) || defined (__stub____lseek) _lseek_will_always_fail_with_ENOSYS(); #else _lseek(); #endif #if defined (__stub_sleep) || defined (__stub___sleep) sleep_will_always_fail_with_ENOSYS(); #else sleep(); #endif #if defined (__stub__access) || defined (__stub____access) _access_will_always_fail_with_ENOSYS(); #else _access(); #endif #if defined (__stub_lseek) || defined (__stub___lseek) lseek_will_always_fail_with_ENOSYS(); #else lseek(); #endif #if defined (__stub_usleep) || defined (__stub___usleep) usleep_will_always_fail_with_ENOSYS(); #else usleep(); #endif #if defined (__stub_dlclose) || defined (__stub___dlclose) dlclose_will_always_fail_with_ENOSYS(); #else dlclose(); #endif #if defined (__stub_gethostname) || defined (__stub___gethostname) gethostname_will_always_fail_with_ENOSYS(); #else gethostname(); #endif #if defined (__stub_clock) || defined (__stub___clock) clock_will_always_fail_with_ENOSYS(); #else clock(); #endif #if defined (__stub_get_nprocs) || defined (__stub___get_nprocs) get_nprocs_will_always_fail_with_ENOSYS(); #else get_nprocs(); #endif #if defined (__stub_access) || defined (__stub___access) access_will_always_fail_with_ENOSYS(); #else access(); #endif #if defined (__stub__snprintf) || defined (__stub____snprintf) _snprintf_will_always_fail_with_ENOSYS(); #else _snprintf(); #endif #if defined (__stub_dlerror) || defined (__stub___dlerror) dlerror_will_always_fail_with_ENOSYS(); #else dlerror(); #endif #if defined (__stub_mkstemp) || defined (__stub___mkstemp) mkstemp_will_always_fail_with_ENOSYS(); #else mkstemp(); #endif #if defined (__stub_fork) || defined (__stub___fork) fork_will_always_fail_with_ENOSYS(); #else fork(); #endif #if defined (__stub_getpagesize) || defined (__stub___getpagesize) getpagesize_will_always_fail_with_ENOSYS(); #else getpagesize(); #endif #if defined (__stub_sbreak) || defined (__stub___sbreak) sbreak_will_always_fail_with_ENOSYS(); #else sbreak(); #endif #if defined (__stub_memalign) || defined (__stub___memalign) memalign_will_always_fail_with_ENOSYS(); #else memalign(); #endif #if defined (__stub_sigset) || defined (__stub___sigset) sigset_will_always_fail_with_ENOSYS(); #else sigset(); #endif #if defined (__stub_getcwd) || defined (__stub___getcwd) getcwd_will_always_fail_with_ENOSYS(); #else getcwd(); #endif #if defined (__stub_gethostbyname) || defined (__stub___gethostbyname) gethostbyname_will_always_fail_with_ENOSYS(); #else gethostbyname(); #endif #if defined (__stub_gettimeofday) || defined (__stub___gettimeofday) gettimeofday_will_always_fail_with_ENOSYS(); #else gettimeofday(); #endif #if defined (__stub_readlink) || defined (__stub___readlink) readlink_will_always_fail_with_ENOSYS(); #else readlink(); #endif #if defined (__stub__set_output_format) || defined (__stub____set_output_format) _set_output_format_will_always_fail_with_ENOSYS(); #else _set_output_format(); #endif #if defined (__stub_PXFGETARG) || defined (__stub___PXFGETARG) PXFGETARG_will_always_fail_with_ENOSYS(); #else PXFGETARG(); #endif #if defined (__stub_sigaction) || defined (__stub___sigaction) sigaction_will_always_fail_with_ENOSYS(); #else sigaction(); #endif #if defined (__stub_strcasecmp) || defined (__stub___strcasecmp) strcasecmp_will_always_fail_with_ENOSYS(); #else strcasecmp(); #endif #if defined (__stub_dlopen) || defined (__stub___dlopen) dlopen_will_always_fail_with_ENOSYS(); #else dlopen(); #endif #if defined (__stub_drand48) || defined (__stub___drand48) drand48_will_always_fail_with_ENOSYS(); #else drand48(); #endif #if defined (__stub_socket) || defined (__stub___socket) socket_will_always_fail_with_ENOSYS(); #else socket(); #endif #if defined (__stub_memmove) || defined (__stub___memmove) memmove_will_always_fail_with_ENOSYS(); #else memmove(); #endif #if defined (__stub_signal) || defined (__stub___signal) signal_will_always_fail_with_ENOSYS(); #else signal(); #endif #if defined (__stub_popen) || defined (__stub___popen) popen_will_always_fail_with_ENOSYS(); #else popen(); #endif #if defined (__stub_getrusage) || defined (__stub___getrusage) getrusage_will_always_fail_with_ENOSYS(); #else getrusage(); #endif #if defined (__stub_times) || defined (__stub___times) times_will_always_fail_with_ENOSYS(); #else times(); #endif #if defined (__stub_time) || defined (__stub___time) time_will_always_fail_with_ENOSYS(); #else time(); #endif #if defined (__stub_sysctlbyname) || defined (__stub___sysctlbyname) sysctlbyname_will_always_fail_with_ENOSYS(); #else sysctlbyname(); #endif #if defined (__stub_stricmp) || defined (__stub___stricmp) stricmp_will_always_fail_with_ENOSYS(); #else stricmp(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o: In function `main': conftest.c:(.text+0x64): warning: the `getwd' function is dangerous and should not be used. conftest.c:(.text+0x1c): undefined reference to `_sleep' conftest.c:(.text+0x58): undefined reference to `_getcwd' conftest.c:(.text+0x7c): undefined reference to `_lseek' conftest.c:(.text+0x94): undefined reference to `_access' conftest.c:(.text+0xf4): undefined reference to `_snprintf' conftest.c:(.text+0x130): undefined reference to `sbreak' conftest.c:(.text+0x184): undefined reference to `_set_output_format' conftest.c:(.text+0x190): undefined reference to `PXFGETARG' conftest.c:(.text+0x220): undefined reference to `sysctlbyname' conftest.c:(.text+0x22c): undefined reference to `stricmp' Checking for functions [rand getdomainname realpath dlsym bzero uname usleep dlclose gethostname clock get_nprocs dlerror mkstemp fork getpagesize] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char rand(); char getdomainname(); char realpath(); char dlsym(); char bzero(); char uname(); char usleep(); char dlclose(); char gethostname(); char clock(); char get_nprocs(); char dlerror(); char mkstemp(); char fork(); char getpagesize(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_rand) || defined (__stub___rand) rand_will_always_fail_with_ENOSYS(); #else rand(); #endif #if defined (__stub_getdomainname) || defined (__stub___getdomainname) getdomainname_will_always_fail_with_ENOSYS(); #else getdomainname(); #endif #if defined (__stub_realpath) || defined (__stub___realpath) realpath_will_always_fail_with_ENOSYS(); #else realpath(); #endif #if defined (__stub_dlsym) || defined (__stub___dlsym) dlsym_will_always_fail_with_ENOSYS(); #else dlsym(); #endif #if defined (__stub_bzero) || defined (__stub___bzero) bzero_will_always_fail_with_ENOSYS(); #else bzero(); #endif #if defined (__stub_uname) || defined (__stub___uname) uname_will_always_fail_with_ENOSYS(); #else uname(); #endif #if defined (__stub_usleep) || defined (__stub___usleep) usleep_will_always_fail_with_ENOSYS(); #else usleep(); #endif #if defined (__stub_dlclose) || defined (__stub___dlclose) dlclose_will_always_fail_with_ENOSYS(); #else dlclose(); #endif #if defined (__stub_gethostname) || defined (__stub___gethostname) gethostname_will_always_fail_with_ENOSYS(); #else gethostname(); #endif #if defined (__stub_clock) || defined (__stub___clock) clock_will_always_fail_with_ENOSYS(); #else clock(); #endif #if defined (__stub_get_nprocs) || defined (__stub___get_nprocs) get_nprocs_will_always_fail_with_ENOSYS(); #else get_nprocs(); #endif #if defined (__stub_dlerror) || defined (__stub___dlerror) dlerror_will_always_fail_with_ENOSYS(); #else dlerror(); #endif #if defined (__stub_mkstemp) || defined (__stub___mkstemp) mkstemp_will_always_fail_with_ENOSYS(); #else mkstemp(); #endif #if defined (__stub_fork) || defined (__stub___fork) fork_will_always_fail_with_ENOSYS(); #else fork(); #endif #if defined (__stub_getpagesize) || defined (__stub___getpagesize) getpagesize_will_always_fail_with_ENOSYS(); #else getpagesize(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_RAND" to "1" Defined "HAVE_GETDOMAINNAME" to "1" Defined "HAVE_REALPATH" to "1" Defined "HAVE_DLSYM" to "1" Defined "HAVE_BZERO" to "1" Defined "HAVE_UNAME" to "1" Defined "HAVE_USLEEP" to "1" Defined "HAVE_DLCLOSE" to "1" Defined "HAVE_GETHOSTNAME" to "1" Defined "HAVE_CLOCK" to "1" Defined "HAVE_GET_NPROCS" to "1" Defined "HAVE_DLERROR" to "1" Defined "HAVE_MKSTEMP" to "1" Defined "HAVE_FORK" to "1" Defined "HAVE_GETPAGESIZE" to "1" Checking for functions [memalign sigset gethostbyname gettimeofday readlink sigaction strcasecmp dlopen drand48 socket memmove signal popen getrusage times time] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char memalign(); char sigset(); char gethostbyname(); char gettimeofday(); char readlink(); char sigaction(); char strcasecmp(); char dlopen(); char drand48(); char socket(); char memmove(); char signal(); char popen(); char getrusage(); char times(); char time(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_memalign) || defined (__stub___memalign) memalign_will_always_fail_with_ENOSYS(); #else memalign(); #endif #if defined (__stub_sigset) || defined (__stub___sigset) sigset_will_always_fail_with_ENOSYS(); #else sigset(); #endif #if defined (__stub_gethostbyname) || defined (__stub___gethostbyname) gethostbyname_will_always_fail_with_ENOSYS(); #else gethostbyname(); #endif #if defined (__stub_gettimeofday) || defined (__stub___gettimeofday) gettimeofday_will_always_fail_with_ENOSYS(); #else gettimeofday(); #endif #if defined (__stub_readlink) || defined (__stub___readlink) readlink_will_always_fail_with_ENOSYS(); #else readlink(); #endif #if defined (__stub_sigaction) || defined (__stub___sigaction) sigaction_will_always_fail_with_ENOSYS(); #else sigaction(); #endif #if defined (__stub_strcasecmp) || defined (__stub___strcasecmp) strcasecmp_will_always_fail_with_ENOSYS(); #else strcasecmp(); #endif #if defined (__stub_dlopen) || defined (__stub___dlopen) dlopen_will_always_fail_with_ENOSYS(); #else dlopen(); #endif #if defined (__stub_drand48) || defined (__stub___drand48) drand48_will_always_fail_with_ENOSYS(); #else drand48(); #endif #if defined (__stub_socket) || defined (__stub___socket) socket_will_always_fail_with_ENOSYS(); #else socket(); #endif #if defined (__stub_memmove) || defined (__stub___memmove) memmove_will_always_fail_with_ENOSYS(); #else memmove(); #endif #if defined (__stub_signal) || defined (__stub___signal) signal_will_always_fail_with_ENOSYS(); #else signal(); #endif #if defined (__stub_popen) || defined (__stub___popen) popen_will_always_fail_with_ENOSYS(); #else popen(); #endif #if defined (__stub_getrusage) || defined (__stub___getrusage) getrusage_will_always_fail_with_ENOSYS(); #else getrusage(); #endif #if defined (__stub_times) || defined (__stub___times) times_will_always_fail_with_ENOSYS(); #else times(); #endif #if defined (__stub_time) || defined (__stub___time) time_will_always_fail_with_ENOSYS(); #else time(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_MEMALIGN" to "1" Defined "HAVE_SIGSET" to "1" Defined "HAVE_GETHOSTBYNAME" to "1" Defined "HAVE_GETTIMEOFDAY" to "1" Defined "HAVE_READLINK" to "1" Defined "HAVE_SIGACTION" to "1" Defined "HAVE_STRCASECMP" to "1" Defined "HAVE_DLOPEN" to "1" Defined "HAVE_DRAND48" to "1" Defined "HAVE_SOCKET" to "1" Defined "HAVE_MEMMOVE" to "1" Defined "HAVE_SIGNAL" to "1" Defined "HAVE_POPEN" to "1" Defined "HAVE_GETRUSAGE" to "1" Defined "HAVE_TIMES" to "1" Defined "HAVE_TIME" to "1" Checking for functions [_sleep] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _sleep(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__sleep) || defined (__stub____sleep) _sleep_will_always_fail_with_ENOSYS(); #else _sleep(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `_sleep' Checking for functions [snprintf] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char snprintf(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_snprintf) || defined (__stub___snprintf) snprintf_will_always_fail_with_ENOSYS(); #else snprintf(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_SNPRINTF" to "1" Checking for functions [_getcwd] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _getcwd(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__getcwd) || defined (__stub____getcwd) _getcwd_will_always_fail_with_ENOSYS(); #else _getcwd(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `_getcwd' Checking for functions [getwd] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getwd(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_getwd) || defined (__stub___getwd) getwd_will_always_fail_with_ENOSYS(); #else getwd(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): warning: the `getwd' function is dangerous and should not be used. Defined "HAVE_GETWD" to "1" Checking for functions [_lseek] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _lseek(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__lseek) || defined (__stub____lseek) _lseek_will_always_fail_with_ENOSYS(); #else _lseek(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `_lseek' Checking for functions [sleep] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sleep(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_sleep) || defined (__stub___sleep) sleep_will_always_fail_with_ENOSYS(); #else sleep(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_SLEEP" to "1" Checking for functions [_access] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _access(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__access) || defined (__stub____access) _access_will_always_fail_with_ENOSYS(); #else _access(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `_access' Checking for functions [lseek] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char lseek(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_lseek) || defined (__stub___lseek) lseek_will_always_fail_with_ENOSYS(); #else lseek(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_LSEEK" to "1" Checking for functions [access] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char access(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_access) || defined (__stub___access) access_will_always_fail_with_ENOSYS(); #else access(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_ACCESS" to "1" Checking for functions [_snprintf] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _snprintf(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__snprintf) || defined (__stub____snprintf) _snprintf_will_always_fail_with_ENOSYS(); #else _snprintf(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `_snprintf' Checking for functions [sbreak] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sbreak(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_sbreak) || defined (__stub___sbreak) sbreak_will_always_fail_with_ENOSYS(); #else sbreak(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `sbreak' Checking for functions [getcwd] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getcwd(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_getcwd) || defined (__stub___getcwd) getcwd_will_always_fail_with_ENOSYS(); #else getcwd(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_GETCWD" to "1" Checking for functions [_set_output_format] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _set_output_format(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__set_output_format) || defined (__stub____set_output_format) _set_output_format_will_always_fail_with_ENOSYS(); #else _set_output_format(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `_set_output_format' Checking for functions [PXFGETARG] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char PXFGETARG(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_PXFGETARG) || defined (__stub___PXFGETARG) PXFGETARG_will_always_fail_with_ENOSYS(); #else PXFGETARG(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `PXFGETARG' Checking for functions [sysctlbyname] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sysctlbyname(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_sysctlbyname) || defined (__stub___sysctlbyname) sysctlbyname_will_always_fail_with_ENOSYS(); #else sysctlbyname(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `sysctlbyname' Checking for functions [stricmp] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char stricmp(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_stricmp) || defined (__stub___stricmp) stricmp_will_always_fail_with_ENOSYS(); #else stricmp(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `stricmp' ================================================================================ TEST configureMemorySize from config.utilities.getResidentSetSize(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/getResidentSetSize.py:31) TESTING: configureMemorySize from config.utilities.getResidentSetSize(config/BuildSystem/config/utilities/getResidentSetSize.py:31) Try to determine how to measure the memory usage Defined "USE_PROC_FOR_SIZE" to "1" Using /proc for PetscMemoryGetCurrentUsage() ================================================================================ TEST configureFortranCommandLine from config.utilities.fortranCommandLine(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/fortranCommandLine.py:27) TESTING: configureFortranCommandLine from config.utilities.fortranCommandLine(config/BuildSystem/config/utilities/fortranCommandLine.py:27) Check for the mechanism to retrieve command line arguments in Fortran Pushing language FC Checking for functions [] in library [''] [] Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.F Possible ERROR while running compiler: stderr: Fortran diagnostic messages: program name(main) jwd2005i-w "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.F", line 4: 'i' is used but never set. Source: program main integer i character*(80) arg call get_command_argument(i,arg) end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language FC Defined "HAVE_FORTRAN_GET_COMMAND_ARGUMENT" to "1" Popping language FC Pushing language C Checking for functions [get_command_argument_] in library [''] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char get_command_argument_(); static void _check_get_command_argument_() { get_command_argument_(); } int main() { _check_get_command_argument_();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o: In function `_check_get_command_argument_': conftest.c:(.text+0x4): undefined reference to `get_command_argument_' Popping language C Checking for functions [getarg_] in library [''] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char getarg_(); static void _check_getarg_() { getarg_(); } int main() { _check_getarg_();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o: In function `_check_getarg_': conftest.c:(.text+0x4): undefined reference to `getarg_' Popping language C Checking for functions [ipxfargc_] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char ipxfargc_(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_ipxfargc_) || defined (__stub___ipxfargc_) ipxfargc__will_always_fail_with_ENOSYS(); #else ipxfargc_(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `ipxfargc_' Checking for functions [f90_unix_MP_iargc] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char f90_unix_MP_iargc(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_f90_unix_MP_iargc) || defined (__stub___f90_unix_MP_iargc) f90_unix_MP_iargc_will_always_fail_with_ENOSYS(); #else f90_unix_MP_iargc(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `f90_unix_MP_iargc' Checking for functions [PXFGETARG] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char PXFGETARG(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_PXFGETARG) || defined (__stub___PXFGETARG) PXFGETARG_will_always_fail_with_ENOSYS(); #else PXFGETARG(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `PXFGETARG' Checking for functions [iargc_] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char iargc_(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_iargc_) || defined (__stub___iargc_) iargc__will_always_fail_with_ENOSYS(); #else iargc_(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `iargc_' Checking for functions [GETARG at 16] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Possible ERROR while running compiler: exit code 512 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c", line 13: error: unrecognized token char GETARG at 16(); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c", line 13: error: expected a ";" char GETARG at 16(); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c", line 21: error: unrecognized token #if defined (__stub_GETARG at 16) || defined (__stub___GETARG at 16) ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c", line 21: error: expected a ")" #if defined (__stub_GETARG at 16) || defined (__stub___GETARG at 16) ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c", line 21: error: extra text after expected end of preprocessing directive #if defined (__stub_GETARG at 16) || defined (__stub___GETARG at 16) ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c", line 24: error: unrecognized token GETARG at 16(); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c", line 24: warning: expression has no effect GETARG at 16(); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c", line 24: error: expected a ";" GETARG at 16(); ^ 7 errors detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c". Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char GETARG at 16(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_GETARG at 16) || defined (__stub___GETARG at 16) GETARG at 16_will_always_fail_with_ENOSYS(); #else GETARG at 16(); #endif ; return 0; } Compile failed inside link Checking for functions [_gfortran_iargc] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _gfortran_iargc(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__gfortran_iargc) || defined (__stub____gfortran_iargc) _gfortran_iargc_will_always_fail_with_ENOSYS(); #else _gfortran_iargc(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `_gfortran_iargc' Popping language C ================================================================================ TEST configureFeatureTestMacros from config.utilities.featureTestMacros(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/featureTestMacros.py:13) TESTING: configureFeatureTestMacros from config.utilities.featureTestMacros(config/BuildSystem/config/utilities/featureTestMacros.py:13) Checks if certain feature test macros are support All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros/conftest.c", line 4: catastrophic error: cannot open source file "sysctl.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" #define _POSIX_C_SOURCE 200112L #include int main() { ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #define _BSD_SOURCE #include int main() { ; return 0; } Defined "_BSD_SOURCE" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #define _DEFAULT_SOURCE #include int main() { ; return 0; } Defined "_DEFAULT_SOURCE" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #define _GNU_SOURCE #include int main() { cpu_set_t mset; CPU_ZERO(&mset);; return 0; } Defined "_GNU_SOURCE" to "1" ================================================================================ TEST configureMissingDefines from config.utilities.missing(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/missing.py:57) TESTING: configureMissingDefines from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:57) Checks for limits All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_LIMITS_H #include #endif int main() { int i=INT_MAX; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_FLOAT_H #include #endif int main() { double d=DBL_MAX; if (d); ; return 0; } ================================================================================ TEST configureMissingUtypeTypedefs from config.utilities.missing(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/missing.py:67) TESTING: configureMissingUtypeTypedefs from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:67) Checks if u_short is undefined Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c", line 6: warning: variable "foo" was declared but never referenced u_short foo; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { u_short foo; ; return 0; } ================================================================================ TEST configureMissingFunctions from config.utilities.missing(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/missing.py:73) TESTING: configureMissingFunctions from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:73) Checks for SOCKETS ================================================================================ TEST configureMissingSignals from config.utilities.missing(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/missing.py:93) TESTING: configureMissingSignals from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:93) Check for missing signals, and define MISSING_ if necessary Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGABRT; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGALRM; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGBUS; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGCHLD; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGCONT; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGFPE; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGHUP; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGILL; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGINT; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGKILL; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGPIPE; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGQUIT; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGSEGV; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGSTOP; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGSYS; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGTERM; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGTRAP; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGTSTP; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGURG; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGUSR1; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGUSR2; if (i); ; return 0; } ================================================================================ TEST configureMissingGetdomainnamePrototype from config.utilities.missing(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/missing.py:110) TESTING: configureMissingGetdomainnamePrototype from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:110) Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #if !defined(_BSD_SOURCE) #define _BSD_SOURCE #endif #if !defined(_DEFAULT_SOURCE) #define _DEFAULT_SOURCE #endif #if !defined(_GNU_SOURCE) #define _GNU_SOURCE #endif #ifdef PETSC_HAVE_UNISTD_H #include #endif #ifdef PETSC_HAVE_NETDB_H #include #endif int main() { int (*getdomainname_ptr)(char*,size_t) = getdomainname; char test[10]; if (getdomainname_ptr(test,10)) return 1; ; return 0; } Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #if !defined(_BSD_SOURCE) #define _BSD_SOURCE #endif #if !defined(_DEFAULT_SOURCE) #define _DEFAULT_SOURCE #endif #if !defined(_GNU_SOURCE) #define _GNU_SOURCE #endif #ifdef PETSC_HAVE_UNISTD_H #include #endif #ifdef PETSC_HAVE_NETDB_H #include #endif int main() { int (*getdomainname_ptr)(char*,size_t) = getdomainname; char test[10]; if (getdomainname_ptr(test,10)) return 1; ; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language Cxx ================================================================================ TEST configureMissingSrandPrototype from config.utilities.missing(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/missing.py:135) TESTING: configureMissingSrandPrototype from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:135) Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #if !defined(_BSD_SOURCE) #define _BSD_SOURCE #endif #if !defined(_DEFAULT_SOURCE) #define _DEFAULT_SOURCE #endif #if !defined(_GNU_SOURCE) #define _GNU_SOURCE #endif #ifdef PETSC_HAVE_STDLIB_H #include #endif int main() { double (*drand48_ptr)(void) = drand48; void (*srand48_ptr)(long int) = srand48; long int seed=10; srand48_ptr(seed); if (drand48_ptr() > 0.5) return 1; ; return 0; } Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #if !defined(_BSD_SOURCE) #define _BSD_SOURCE #endif #if !defined(_DEFAULT_SOURCE) #define _DEFAULT_SOURCE #endif #if !defined(_GNU_SOURCE) #define _GNU_SOURCE #endif #ifdef PETSC_HAVE_STDLIB_H #include #endif int main() { double (*drand48_ptr)(void) = drand48; void (*srand48_ptr)(long int) = srand48; long int seed=10; srand48_ptr(seed); if (drand48_ptr() > 0.5) return 1; ; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language Cxx ================================================================================ TEST configureFPTrap from config.utilities.FPTrap(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/FPTrap.py:27) TESTING: configureFPTrap from config.utilities.FPTrap(config/BuildSystem/config/utilities/FPTrap.py:27) Checking the handling of floating point traps Checking for header: sigfpe.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "sigfpe.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "sigfpe.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "sigfpe.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c".: Checking for header: fpxcp.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "fpxcp.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "fpxcp.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "fpxcp.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c".: Checking for header: floatingpoint.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "floatingpoint.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "floatingpoint.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "floatingpoint.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c".: ================================================================================ TEST configureMkdir from config.programs(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/programs.py:22) TESTING: configureMkdir from config.programs(config/BuildSystem/config/programs.py:22) Make sure we can have mkdir automatically make intermediate directories Checking for program /opt/FJSVtclang/check/mkdir...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/mkdir...not found Checking for program /opt/kusu/bin/mkdir...not found Checking for program /opt/kusu/sbin/mkdir...not found Checking for program /usr/pgsql-9.0/bin/mkdir...not found Checking for program /usr/local/bin/mkdir...not found Checking for program /bin/mkdir...found Executing: /bin/mkdir -p .conftest/tmp Adding -p flag to /bin/mkdir -p to automatically create directories Defined make macro "MKDIR" to "/bin/mkdir -p" ================================================================================ TEST configureAutoreconf from config.programs(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/programs.py:44) TESTING: configureAutoreconf from config.programs(config/BuildSystem/config/programs.py:44) Check for autoreconf Checking for program /opt/FJSVtclang/check/autoreconf...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/autoreconf...not found Checking for program /opt/kusu/bin/autoreconf...not found Checking for program /opt/kusu/sbin/autoreconf...not found Checking for program /usr/pgsql-9.0/bin/autoreconf...not found Checking for program /usr/local/bin/autoreconf...not found Checking for program /bin/autoreconf...not found Checking for program /usr/bin/autoreconf...found All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.programs Executing: cd /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.programs/autoconfdir&&/usr/bin/autoreconf autoreconf test successful! ================================================================================ TEST configurePrograms from config.programs(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/programs.py:66) TESTING: configurePrograms from config.programs(config/BuildSystem/config/programs.py:66) Check for the programs needed to build and run PETSc Checking for program /opt/FJSVtclang/check/sh...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/sh...not found Checking for program /opt/kusu/bin/sh...not found Checking for program /opt/kusu/sbin/sh...not found Checking for program /usr/pgsql-9.0/bin/sh...not found Checking for program /usr/local/bin/sh...not found Checking for program /bin/sh...found Defined make macro "SHELL" to "/bin/sh" Checking for program /opt/FJSVtclang/check/sed...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/sed...not found Checking for program /opt/kusu/bin/sed...not found Checking for program /opt/kusu/sbin/sed...not found Checking for program /usr/pgsql-9.0/bin/sed...not found Checking for program /usr/local/bin/sed...not found Checking for program /bin/sed...found Defined make macro "SED" to "/bin/sed" Executing: /bin/sed -i s/sed/sd/g "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.programs/sed1" Adding SEDINPLACE cmd: /bin/sed -i Defined make macro "SEDINPLACE" to "/bin/sed -i" Checking for program /opt/FJSVtclang/check/mv...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/mv...not found Checking for program /opt/kusu/bin/mv...not found Checking for program /opt/kusu/sbin/mv...not found Checking for program /usr/pgsql-9.0/bin/mv...not found Checking for program /usr/local/bin/mv...not found Checking for program /bin/mv...found Defined make macro "MV" to "/bin/mv" Checking for program /opt/FJSVtclang/check/cp...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/cp...not found Checking for program /opt/kusu/bin/cp...not found Checking for program /opt/kusu/sbin/cp...not found Checking for program /usr/pgsql-9.0/bin/cp...not found Checking for program /usr/local/bin/cp...not found Checking for program /bin/cp...found Defined make macro "CP" to "/bin/cp" Checking for program /opt/FJSVtclang/check/grep...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/grep...not found Checking for program /opt/kusu/bin/grep...not found Checking for program /opt/kusu/sbin/grep...not found Checking for program /usr/pgsql-9.0/bin/grep...not found Checking for program /usr/local/bin/grep...not found Checking for program /bin/grep...found Defined make macro "GREP" to "/bin/grep" Checking for program /opt/FJSVtclang/check/rm...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/rm...not found Checking for program /opt/kusu/bin/rm...not found Checking for program /opt/kusu/sbin/rm...not found Checking for program /usr/pgsql-9.0/bin/rm...not found Checking for program /usr/local/bin/rm...not found Checking for program /bin/rm...found Defined make macro "RM" to "/bin/rm -f" Checking for program /opt/FJSVtclang/check/diff...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/diff...not found Checking for program /opt/kusu/bin/diff...not found Checking for program /opt/kusu/sbin/diff...not found Checking for program /usr/pgsql-9.0/bin/diff...not found Checking for program /usr/local/bin/diff...not found Checking for program /bin/diff...not found Checking for program /usr/bin/diff...found Executing: "/usr/bin/diff" -w "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.programs/diff1" "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.programs/diff2" Defined make macro "DIFF" to "/usr/bin/diff -w" Checking for program /usr/ucb/ps...not found Checking for program /usr/usb/ps...not found Checking for program /home/hp150306/t00196/ps...not found Checking for program /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/bin/win32fe/ps...not found Checking for program /opt/FJSVtclang/check/gzip...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/gzip...not found Checking for program /opt/kusu/bin/gzip...not found Checking for program /opt/kusu/sbin/gzip...not found Checking for program /usr/pgsql-9.0/bin/gzip...not found Checking for program /usr/local/bin/gzip...not found Checking for program /bin/gzip...found Defined make macro "GZIP" to "/bin/gzip" Defined "HAVE_GZIP" to "1" Defined make macro "PYTHON" to "/usr/bin/python" ================================================================================ TEST configureMake from config.packages.make(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/make.py:66) TESTING: configureMake from config.packages.make(config/BuildSystem/config/packages/make.py:66) Check for user specified make - or gmake, make Checking for program /opt/FJSVtclang/check/gmake...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/gmake...not found Checking for program /opt/kusu/bin/gmake...not found Checking for program /opt/kusu/sbin/gmake...not found Checking for program /usr/pgsql-9.0/bin/gmake...not found Checking for program /usr/local/bin/gmake...not found Checking for program /bin/gmake...not found Checking for program /usr/bin/gmake...found Defined make macro "MAKE" to "/usr/bin/gmake" ================================================================================ TEST configureCheckGNUMake from config.packages.make(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/make.py:84) TESTING: configureCheckGNUMake from config.packages.make(config/BuildSystem/config/packages/make.py:84) Check for GNU make Executing: /usr/bin/gmake --version stdout: GNU Make 3.81 Copyright (C) 2006 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. This program built for sparc64-unknown-linux-gnu Defined make macro "MAKE_IS_GNUMAKE" to "1" Defined make rule "libc" with dependencies "${LIBNAME}(${OBJSC})" and code [] Defined make rule "libcxx" with dependencies "${LIBNAME}(${OBJSCXX})" and code [] Defined make rule "libcu" with dependencies "${LIBNAME}(${OBJSCU})" and code [] Defined make rule "libf" with dependencies "${OBJSF}" and code -${AR} ${AR_FLAGS} ${LIBNAME} ${OBJSF} ================================================================================ TEST configureMakeNP from config.packages.make(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/make.py:119) TESTING: configureMakeNP from config.packages.make(config/BuildSystem/config/packages/make.py:119) check no of cores on the build machine [perhaps to do make '-j ncores'] module multiprocessing found 8 cores: using make_np = 7 Defined make macro "MAKE_NP" to "7" Defined make macro "OMAKE_PRINTDIR " to "/usr/bin/gmake --print-directory" Defined make macro "OMAKE" to "/usr/bin/gmake --no-print-directory" ================================================================================ TEST alternateConfigureLibrary from config.packages.OpenMPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.OpenMPI(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.MPICH(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.MPICH(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default Pushing language C ================================================================================ TEST configureLibrary from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:476) TESTING: configureLibrary from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:476) Calls the regular package configureLibrary and then does an additional test needed by MPI ================================================================================== Checking for a functional MPI Checking for library in Compiler specific search MPI: [] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [MPI_Init MPI_Comm_create] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Init(); static void _check_MPI_Init() { MPI_Init(); } char MPI_Comm_create(); static void _check_MPI_Comm_create() { MPI_Comm_create(); } int main() { _check_MPI_Init(); _check_MPI_Comm_create();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Checking for headers Compiler specific search MPI: [] Pushing language C ================================================================================ TEST checkInclude from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['mpi.h'] in [] Checking include with compiler flags var CPPFLAGS [] Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 212 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef long ptrdiff_t; #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef int wchar_t; #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 225 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 1 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi_portable_platform.h" #line 343 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi_portable_platform.h" #line 386 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi_portable_platform.h" #line 258 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 278 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" typedef ptrdiff_t MPI_Aint; typedef long long MPI_Offset; typedef struct ompi_communicator_t *MPI_Comm; typedef struct ompi_datatype_t *MPI_Datatype; typedef struct ompi_errhandler_t *MPI_Errhandler; typedef struct ompi_file_t *MPI_File; typedef struct ompi_group_t *MPI_Group; typedef struct ompi_info_t *MPI_Info; typedef struct ompi_op_t *MPI_Op; typedef struct ompi_request_t *MPI_Request; typedef struct ompi_message_t *MPI_Message; typedef struct ompi_status_public_t MPI_Status; typedef struct ompi_win_t *MPI_Win; #pragma pack(4) struct ompi_status_public_t { int MPI_SOURCE; int MPI_TAG; int MPI_ERROR; unsigned long _cancelled : 1; unsigned long _ucount : 63; }; #pragma pack() typedef struct ompi_status_public_t ompi_status_public_t; typedef int (MPI_Copy_function)(MPI_Comm, int, void *, void *, void *, int *); typedef int (MPI_Delete_function)(MPI_Comm, int, void *, void *); typedef int (MPI_Datarep_extent_function)(MPI_Datatype, MPI_Aint *, void *); typedef int (MPI_Datarep_conversion_function)(void *, MPI_Datatype, int, void *, MPI_Offset, void *); typedef void (MPI_Comm_errhandler_function)(MPI_Comm *, int *, ...); typedef MPI_Comm_errhandler_function MPI_Comm_errhandler_fn ; typedef void (ompi_file_errhandler_fn)(MPI_File *, int *, ...); typedef ompi_file_errhandler_fn MPI_File_errhandler_fn ; typedef ompi_file_errhandler_fn MPI_File_errhandler_function; typedef void (MPI_Win_errhandler_function)(MPI_Win *, int *, ...); typedef MPI_Win_errhandler_function MPI_Win_errhandler_fn ; typedef void (MPI_Handler_function)(MPI_Comm *, int *, ...); typedef void (MPI_User_function)(void *, void *, int *, MPI_Datatype *); typedef int (MPI_Comm_copy_attr_function)(MPI_Comm, int, void *, void *, void *, int *); typedef int (MPI_Comm_delete_attr_function)(MPI_Comm, int, void *, void *); typedef int (MPI_Type_copy_attr_function)(MPI_Datatype, int, void *, void *, void *, int *); typedef int (MPI_Type_delete_attr_function)(MPI_Datatype, int, void *, void *); typedef int (MPI_Win_copy_attr_function)(MPI_Win, int, void *, void *, void *, int *); typedef int (MPI_Win_delete_attr_function)(MPI_Win, int, void *, void *); typedef int (MPI_Grequest_query_function)(void *, MPI_Status *); typedef int (MPI_Grequest_free_function)(void *); typedef int (MPI_Grequest_cancel_function)(void *, int); #line 432 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 453 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 469 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" enum { MPI_TAG_UB, MPI_HOST, MPI_IO, MPI_WTIME_IS_GLOBAL, MPI_APPNUM, MPI_LASTUSEDCODE, MPI_UNIVERSE_SIZE, MPI_WIN_BASE, MPI_WIN_SIZE, MPI_WIN_DISP_UNIT, IMPI_CLIENT_SIZE, IMPI_CLIENT_COLOR, IMPI_HOST_SIZE, IMPI_HOST_COLOR }; #line 582 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" enum { MPI_IDENT, MPI_CONGRUENT, MPI_SIMILAR, MPI_UNEQUAL }; enum { MPI_THREAD_SINGLE, MPI_THREAD_FUNNELED, MPI_THREAD_SERIALIZED, MPI_THREAD_MULTIPLE }; enum { MPI_COMBINER_NAMED, MPI_COMBINER_DUP, MPI_COMBINER_CONTIGUOUS, MPI_COMBINER_VECTOR, MPI_COMBINER_HVECTOR_INTEGER, MPI_COMBINER_HVECTOR, MPI_COMBINER_INDEXED, MPI_COMBINER_HINDEXED_INTEGER, MPI_COMBINER_HINDEXED, MPI_COMBINER_INDEXED_BLOCK, MPI_COMBINER_STRUCT_INTEGER, MPI_COMBINER_STRUCT, MPI_COMBINER_SUBARRAY, MPI_COMBINER_DARRAY, MPI_COMBINER_F90_REAL, MPI_COMBINER_F90_COMPLEX, MPI_COMBINER_F90_INTEGER, MPI_COMBINER_RESIZED, MPI_COMBINER_HINDEXED_BLOCK }; #line 649 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" int OMPI_C_MPI_TYPE_NULL_DELETE_FN( MPI_Datatype datatype, int type_keyval, void* attribute_val_out, void* extra_state ); int OMPI_C_MPI_TYPE_NULL_COPY_FN( MPI_Datatype datatype, int type_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); int OMPI_C_MPI_TYPE_DUP_FN( MPI_Datatype datatype, int type_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); int OMPI_C_MPI_COMM_NULL_DELETE_FN( MPI_Comm comm, int comm_keyval, void* attribute_val_out, void* extra_state ); int OMPI_C_MPI_COMM_NULL_COPY_FN( MPI_Comm comm, int comm_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); int OMPI_C_MPI_COMM_DUP_FN( MPI_Comm comm, int comm_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); int OMPI_C_MPI_NULL_DELETE_FN( MPI_Comm comm, int comm_keyval, void* attribute_val_out, void* extra_state ) ; int OMPI_C_MPI_NULL_COPY_FN( MPI_Comm comm, int comm_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ) ; int OMPI_C_MPI_DUP_FN( MPI_Comm comm, int comm_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ) ; int OMPI_C_MPI_WIN_NULL_DELETE_FN( MPI_Win window, int win_keyval, void* attribute_val_out, void* extra_state ); int OMPI_C_MPI_WIN_NULL_COPY_FN( MPI_Win window, int win_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); int OMPI_C_MPI_WIN_DUP_FN( MPI_Win window, int win_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); extern struct ompi_predefined_communicator_t ompi_mpi_comm_world; extern struct ompi_predefined_communicator_t ompi_mpi_comm_self; extern struct ompi_predefined_communicator_t ompi_mpi_comm_null; extern struct ompi_predefined_group_t ompi_mpi_group_empty; extern struct ompi_predefined_group_t ompi_mpi_group_null; extern struct ompi_predefined_request_t ompi_request_null; extern struct ompi_predefined_message_t ompi_message_null; extern struct ompi_predefined_message_t ompi_message_no_proc; extern struct ompi_predefined_op_t ompi_mpi_op_null; extern struct ompi_predefined_op_t ompi_mpi_op_min; extern struct ompi_predefined_op_t ompi_mpi_op_max; extern struct ompi_predefined_op_t ompi_mpi_op_sum; extern struct ompi_predefined_op_t ompi_mpi_op_prod; extern struct ompi_predefined_op_t ompi_mpi_op_land; extern struct ompi_predefined_op_t ompi_mpi_op_band; extern struct ompi_predefined_op_t ompi_mpi_op_lor; extern struct ompi_predefined_op_t ompi_mpi_op_bor; extern struct ompi_predefined_op_t ompi_mpi_op_lxor; extern struct ompi_predefined_op_t ompi_mpi_op_bxor; extern struct ompi_predefined_op_t ompi_mpi_op_maxloc; extern struct ompi_predefined_op_t ompi_mpi_op_minloc; extern struct ompi_predefined_op_t ompi_mpi_op_replace; extern struct ompi_predefined_datatype_t ompi_mpi_datatype_null; extern struct ompi_predefined_datatype_t ompi_mpi_lb ; extern struct ompi_predefined_datatype_t ompi_mpi_ub ; extern struct ompi_predefined_datatype_t ompi_mpi_char; extern struct ompi_predefined_datatype_t ompi_mpi_signed_char; extern struct ompi_predefined_datatype_t ompi_mpi_unsigned_char; extern struct ompi_predefined_datatype_t ompi_mpi_byte; extern struct ompi_predefined_datatype_t ompi_mpi_short; extern struct ompi_predefined_datatype_t ompi_mpi_unsigned_short; extern struct ompi_predefined_datatype_t ompi_mpi_int; extern struct ompi_predefined_datatype_t ompi_mpi_unsigned; extern struct ompi_predefined_datatype_t ompi_mpi_long; extern struct ompi_predefined_datatype_t ompi_mpi_unsigned_long; extern struct ompi_predefined_datatype_t ompi_mpi_long_long_int; extern struct ompi_predefined_datatype_t ompi_mpi_unsigned_long_long; extern struct ompi_predefined_datatype_t ompi_mpi_float; extern struct ompi_predefined_datatype_t ompi_mpi_double; extern struct ompi_predefined_datatype_t ompi_mpi_long_double; extern struct ompi_predefined_datatype_t ompi_mpi_wchar; extern struct ompi_predefined_datatype_t ompi_mpi_packed; extern struct ompi_predefined_datatype_t ompi_mpi_cxx_bool; extern struct ompi_predefined_datatype_t ompi_mpi_cxx_cplex; extern struct ompi_predefined_datatype_t ompi_mpi_cxx_dblcplex; extern struct ompi_predefined_datatype_t ompi_mpi_cxx_ldblcplex; extern struct ompi_predefined_datatype_t ompi_mpi_logic; extern struct ompi_predefined_datatype_t ompi_mpi_character; extern struct ompi_predefined_datatype_t ompi_mpi_integer; extern struct ompi_predefined_datatype_t ompi_mpi_real; extern struct ompi_predefined_datatype_t ompi_mpi_dblprec; extern struct ompi_predefined_datatype_t ompi_mpi_cplex; extern struct ompi_predefined_datatype_t ompi_mpi_dblcplex; extern struct ompi_predefined_datatype_t ompi_mpi_ldblcplex; extern struct ompi_predefined_datatype_t ompi_mpi_2int; extern struct ompi_predefined_datatype_t ompi_mpi_2integer; extern struct ompi_predefined_datatype_t ompi_mpi_2real; extern struct ompi_predefined_datatype_t ompi_mpi_2dblprec; extern struct ompi_predefined_datatype_t ompi_mpi_2cplex; extern struct ompi_predefined_datatype_t ompi_mpi_2dblcplex; extern struct ompi_predefined_datatype_t ompi_mpi_float_int; extern struct ompi_predefined_datatype_t ompi_mpi_double_int; extern struct ompi_predefined_datatype_t ompi_mpi_longdbl_int; extern struct ompi_predefined_datatype_t ompi_mpi_short_int; extern struct ompi_predefined_datatype_t ompi_mpi_long_int; extern struct ompi_predefined_datatype_t ompi_mpi_logical1; extern struct ompi_predefined_datatype_t ompi_mpi_logical2; extern struct ompi_predefined_datatype_t ompi_mpi_logical4; extern struct ompi_predefined_datatype_t ompi_mpi_logical8; extern struct ompi_predefined_datatype_t ompi_mpi_integer1; extern struct ompi_predefined_datatype_t ompi_mpi_integer2; extern struct ompi_predefined_datatype_t ompi_mpi_integer4; extern struct ompi_predefined_datatype_t ompi_mpi_integer8; extern struct ompi_predefined_datatype_t ompi_mpi_integer16; extern struct ompi_predefined_datatype_t ompi_mpi_real2; extern struct ompi_predefined_datatype_t ompi_mpi_real4; extern struct ompi_predefined_datatype_t ompi_mpi_real8; extern struct ompi_predefined_datatype_t ompi_mpi_real16; extern struct ompi_predefined_datatype_t ompi_mpi_complex8; extern struct ompi_predefined_datatype_t ompi_mpi_complex16; extern struct ompi_predefined_datatype_t ompi_mpi_complex32; extern struct ompi_predefined_datatype_t ompi_mpi_int8_t; extern struct ompi_predefined_datatype_t ompi_mpi_uint8_t; extern struct ompi_predefined_datatype_t ompi_mpi_int16_t; extern struct ompi_predefined_datatype_t ompi_mpi_uint16_t; extern struct ompi_predefined_datatype_t ompi_mpi_int32_t; extern struct ompi_predefined_datatype_t ompi_mpi_uint32_t; extern struct ompi_predefined_datatype_t ompi_mpi_int64_t; extern struct ompi_predefined_datatype_t ompi_mpi_uint64_t; extern struct ompi_predefined_datatype_t ompi_mpi_aint; extern struct ompi_predefined_datatype_t ompi_mpi_offset; extern struct ompi_predefined_datatype_t ompi_mpi_c_bool; extern struct ompi_predefined_datatype_t ompi_mpi_c_complex; extern struct ompi_predefined_datatype_t ompi_mpi_c_float_complex; extern struct ompi_predefined_datatype_t ompi_mpi_c_double_complex; extern struct ompi_predefined_datatype_t ompi_mpi_c_long_double_complex; extern struct ompi_predefined_errhandler_t ompi_mpi_errhandler_null; extern struct ompi_predefined_errhandler_t ompi_mpi_errors_are_fatal; extern struct ompi_predefined_errhandler_t ompi_mpi_errors_return; extern struct ompi_predefined_win_t ompi_mpi_win_null; extern struct ompi_predefined_file_t ompi_mpi_file_null; extern struct ompi_predefined_info_t ompi_mpi_info_null; extern int *MPI_F_STATUS_IGNORE; extern int *MPI_F_STATUSES_IGNORE; #line 921 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 954 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 1011 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 1038 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" int MPI_Abort(MPI_Comm comm, int errorcode); int MPI_Accumulate(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Op op, MPI_Win win); int MPI_Add_error_class(int *errorclass); int MPI_Add_error_code(int errorclass, int *errorcode); int MPI_Add_error_string(int errorcode, char *string); int MPI_Address(void *location, MPI_Aint *address) ; int MPI_Allgather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm); int MPI_Iallgather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int MPI_Allgatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, MPI_Comm comm); int MPI_Iallgatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int MPI_Alloc_mem(MPI_Aint size, MPI_Info info, void *baseptr); int MPI_Allreduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int MPI_Iallreduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int MPI_Alltoall(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm); int MPI_Ialltoall(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int MPI_Alltoallv(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype recvtype, MPI_Comm comm); int MPI_Ialltoallv(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int MPI_Alltoallw(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype *sendtypes, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype *recvtypes, MPI_Comm comm); int MPI_Ialltoallw(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype *sendtypes, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype *recvtypes, MPI_Comm comm, MPI_Request *request); int MPI_Attr_delete(MPI_Comm comm, int keyval) ; int MPI_Attr_get(MPI_Comm comm, int keyval, void *attribute_val, int *flag) ; int MPI_Attr_put(MPI_Comm comm, int keyval, void *attribute_val) ; int MPI_Barrier(MPI_Comm comm); int MPI_Ibarrier(MPI_Comm comm, MPI_Request *request); int MPI_Bcast(void *buffer, int count, MPI_Datatype datatype, int root, MPI_Comm comm); int MPI_Bsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int MPI_Ibcast(void *buffer, int count, MPI_Datatype datatype, int root, MPI_Comm comm, MPI_Request *request); int MPI_Bsend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Buffer_attach(void *buffer, int size); int MPI_Buffer_detach(void *buffer, int *size); int MPI_Cancel(MPI_Request *request); int MPI_Cart_coords(MPI_Comm comm, int rank, int maxdims, int *coords); int MPI_Cart_create(MPI_Comm old_comm, int ndims, int *dims, int *periods, int reorder, MPI_Comm *comm_cart); int MPI_Cart_get(MPI_Comm comm, int maxdims, int *dims, int *periods, int *coords); int MPI_Cart_map(MPI_Comm comm, int ndims, int *dims, int *periods, int *newrank); int MPI_Cart_rank(MPI_Comm comm, int *coords, int *rank); int MPI_Cart_shift(MPI_Comm comm, int direction, int disp, int *rank_source, int *rank_dest); int MPI_Cart_sub(MPI_Comm comm, int *remain_dims, MPI_Comm *new_comm); int MPI_Cartdim_get(MPI_Comm comm, int *ndims); int MPI_Close_port(char *port_name); int MPI_Comm_accept(char *port_name, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *newcomm); int MPI_Comm_c2f(MPI_Comm comm); int MPI_Comm_call_errhandler(MPI_Comm comm, int errorcode); int MPI_Comm_compare(MPI_Comm comm1, MPI_Comm comm2, int *result); int MPI_Comm_connect(char *port_name, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *newcomm); int MPI_Comm_create_errhandler(MPI_Comm_errhandler_function *function, MPI_Errhandler *errhandler); int MPI_Comm_create_keyval(MPI_Comm_copy_attr_function *comm_copy_attr_fn, MPI_Comm_delete_attr_function *comm_delete_attr_fn, int *comm_keyval, void *extra_state); int MPI_Comm_create(MPI_Comm comm, MPI_Group group, MPI_Comm *newcomm); int MPI_Comm_delete_attr(MPI_Comm comm, int comm_keyval); int MPI_Comm_disconnect(MPI_Comm *comm); int MPI_Comm_dup(MPI_Comm comm, MPI_Comm *newcomm); MPI_Comm MPI_Comm_f2c(int comm); int MPI_Comm_free_keyval(int *comm_keyval); int MPI_Comm_free(MPI_Comm *comm); int MPI_Comm_get_attr(MPI_Comm comm, int comm_keyval, void *attribute_val, int *flag); int MPI_Dist_graph_create(MPI_Comm comm_old, int n, int nodes[], int degrees[], int targets[], int weights[], MPI_Info info, int reorder, MPI_Comm * newcomm); int MPI_Dist_graph_create_adjacent(MPI_Comm comm_old, int indegree, int sources[], int sourceweights[], int outdegree, int destinations[], int destweights[], MPI_Info info, int reorder, MPI_Comm *comm_dist_graph); int MPI_Dist_graph_neighbors(MPI_Comm comm, int maxindegree, int sources[], int sourceweights[], int maxoutdegree, int destinations[], int destweights[]); int MPI_Dist_graph_neighbors_count(MPI_Comm comm, int *inneighbors, int *outneighbors, int *weighted); int MPI_Comm_get_errhandler(MPI_Comm comm, MPI_Errhandler *erhandler); int MPI_Comm_get_name(MPI_Comm comm, char *comm_name, int *resultlen); int MPI_Comm_get_parent(MPI_Comm *parent); int MPI_Comm_group(MPI_Comm comm, MPI_Group *group); int MPI_Comm_join(int fd, MPI_Comm *intercomm); int MPI_Comm_rank(MPI_Comm comm, int *rank); int MPI_Comm_remote_group(MPI_Comm comm, MPI_Group *group); int MPI_Comm_remote_size(MPI_Comm comm, int *size); int MPI_Comm_set_attr(MPI_Comm comm, int comm_keyval, void *attribute_val); int MPI_Comm_set_errhandler(MPI_Comm comm, MPI_Errhandler errhandler); int MPI_Comm_set_name(MPI_Comm comm, char *comm_name); int MPI_Comm_size(MPI_Comm comm, int *size); int MPI_Comm_spawn(char *command, char **argv, int maxprocs, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *intercomm, int *array_of_errcodes); int MPI_Comm_spawn_multiple(int count, char **array_of_commands, char ***array_of_argv, int *array_of_maxprocs, MPI_Info *array_of_info, int root, MPI_Comm comm, MPI_Comm *intercomm, int *array_of_errcodes); int MPI_Comm_split(MPI_Comm comm, int color, int key, MPI_Comm *newcomm); int MPI_Comm_test_inter(MPI_Comm comm, int *flag); int MPI_Dims_create(int nnodes, int ndims, int *dims); int MPI_Errhandler_c2f(MPI_Errhandler errhandler); int MPI_Errhandler_create(MPI_Handler_function *function, MPI_Errhandler *errhandler) ; MPI_Errhandler MPI_Errhandler_f2c(int errhandler); int MPI_Errhandler_free(MPI_Errhandler *errhandler); int MPI_Errhandler_get(MPI_Comm comm, MPI_Errhandler *errhandler) ; int MPI_Errhandler_set(MPI_Comm comm, MPI_Errhandler errhandler) ; int MPI_Error_class(int errorcode, int *errorclass); int MPI_Error_string(int errorcode, char *string, int *resultlen); int MPI_Exscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int MPI_Iexscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int MPI_File_c2f(MPI_File file); MPI_File MPI_File_f2c(int file); int MPI_File_call_errhandler(MPI_File fh, int errorcode); int MPI_File_create_errhandler(MPI_File_errhandler_function *function, MPI_Errhandler *errhandler); int MPI_File_set_errhandler( MPI_File file, MPI_Errhandler errhandler); int MPI_File_get_errhandler( MPI_File file, MPI_Errhandler *errhandler); int MPI_File_open(MPI_Comm comm, char *filename, int amode, MPI_Info info, MPI_File *fh); int MPI_File_close(MPI_File *fh); int MPI_File_delete(char *filename, MPI_Info info); int MPI_File_set_size(MPI_File fh, MPI_Offset size); int MPI_File_preallocate(MPI_File fh, MPI_Offset size); int MPI_File_get_size(MPI_File fh, MPI_Offset *size); int MPI_File_get_group(MPI_File fh, MPI_Group *group); int MPI_File_get_amode(MPI_File fh, int *amode); int MPI_File_set_info(MPI_File fh, MPI_Info info); int MPI_File_get_info(MPI_File fh, MPI_Info *info_used); int MPI_File_set_view(MPI_File fh, MPI_Offset disp, MPI_Datatype etype, MPI_Datatype filetype, char *datarep, MPI_Info info); int MPI_File_get_view(MPI_File fh, MPI_Offset *disp, MPI_Datatype *etype, MPI_Datatype *filetype, char *datarep); int MPI_File_read_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_read_at_all(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write_at_all(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_iread_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_iwrite_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_read(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_read_all(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write_all(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_iread(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_iwrite(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_seek(MPI_File fh, MPI_Offset offset, int whence); int MPI_File_get_position(MPI_File fh, MPI_Offset *offset); int MPI_File_get_byte_offset(MPI_File fh, MPI_Offset offset, MPI_Offset *disp); int MPI_File_read_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_iread_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_iwrite_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_read_ordered(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write_ordered(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_seek_shared(MPI_File fh, MPI_Offset offset, int whence); int MPI_File_get_position_shared(MPI_File fh, MPI_Offset *offset); int MPI_File_read_at_all_begin(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype); int MPI_File_read_at_all_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_write_at_all_begin(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype); int MPI_File_write_at_all_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_read_all_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int MPI_File_read_all_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_write_all_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int MPI_File_write_all_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_read_ordered_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int MPI_File_read_ordered_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_write_ordered_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int MPI_File_write_ordered_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_get_type_extent(MPI_File fh, MPI_Datatype datatype, MPI_Aint *extent); int MPI_File_set_atomicity(MPI_File fh, int flag); int MPI_File_get_atomicity(MPI_File fh, int *flag); int MPI_File_sync(MPI_File fh); int MPI_Finalize(void); int MPI_Finalized(int *flag); int MPI_Free_mem(void *base); int MPI_Gather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int MPI_Igather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int MPI_Gatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, int root, MPI_Comm comm); int MPI_Igatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int MPI_Get_address(void *location, MPI_Aint *address); int MPI_Get_count(MPI_Status *status, MPI_Datatype datatype, int *count); int MPI_Get_elements(MPI_Status *status, MPI_Datatype datatype, int *count); int MPI_Get(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Win win); int MPI_Get_processor_name(char *name, int *resultlen); int MPI_Get_version(int *version, int *subversion); int MPI_Graph_create(MPI_Comm comm_old, int nnodes, int *index, int *edges, int reorder, MPI_Comm *comm_graph); int MPI_Graph_get(MPI_Comm comm, int maxindex, int maxedges, int *index, int *edges); int MPI_Graph_map(MPI_Comm comm, int nnodes, int *index, int *edges, int *newrank); int MPI_Graph_neighbors_count(MPI_Comm comm, int rank, int *nneighbors); int MPI_Graph_neighbors(MPI_Comm comm, int rank, int maxneighbors, int *neighbors); int MPI_Graphdims_get(MPI_Comm comm, int *nnodes, int *nedges); int MPI_Grequest_complete(MPI_Request request); int MPI_Grequest_start(MPI_Grequest_query_function *query_fn, MPI_Grequest_free_function *free_fn, MPI_Grequest_cancel_function *cancel_fn, void *extra_state, MPI_Request *request); int MPI_Group_c2f(MPI_Group group); int MPI_Group_compare(MPI_Group group1, MPI_Group group2, int *result); int MPI_Group_difference(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int MPI_Group_excl(MPI_Group group, int n, int *ranks, MPI_Group *newgroup); MPI_Group MPI_Group_f2c(int group); int MPI_Group_free(MPI_Group *group); int MPI_Group_incl(MPI_Group group, int n, int *ranks, MPI_Group *newgroup); int MPI_Group_intersection(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int MPI_Group_range_excl(MPI_Group group, int n, int ranges[][3], MPI_Group *newgroup); int MPI_Group_range_incl(MPI_Group group, int n, int ranges[][3], MPI_Group *newgroup); int MPI_Group_rank(MPI_Group group, int *rank); int MPI_Group_size(MPI_Group group, int *size); int MPI_Group_translate_ranks(MPI_Group group1, int n, int *ranks1, MPI_Group group2, int *ranks2); int MPI_Group_union(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int MPI_Ibsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Improbe(int source, int tag, MPI_Comm comm, int *flag, MPI_Message *message, MPI_Status *status); int MPI_Imrecv(void *buf, int count, MPI_Datatype type, MPI_Message *message, MPI_Request *request); int MPI_Info_c2f(MPI_Info info); int MPI_Info_create(MPI_Info *info); int MPI_Info_delete(MPI_Info info, char *key); int MPI_Info_dup(MPI_Info info, MPI_Info *newinfo); MPI_Info MPI_Info_f2c(int info); int MPI_Info_free(MPI_Info *info); int MPI_Info_get(MPI_Info info, char *key, int valuelen, char *value, int *flag); int MPI_Info_get_nkeys(MPI_Info info, int *nkeys); int MPI_Info_get_nthkey(MPI_Info info, int n, char *key); int MPI_Info_get_valuelen(MPI_Info info, char *key, int *valuelen, int *flag); int MPI_Info_set(MPI_Info info, char *key, char *value); int MPI_Init(int *argc, char ***argv); int MPI_Initialized(int *flag); int MPI_Init_thread(int *argc, char ***argv, int required, int *provided); int MPI_Intercomm_create(MPI_Comm local_comm, int local_leader, MPI_Comm bridge_comm, int remote_leader, int tag, MPI_Comm *newintercomm); int MPI_Intercomm_merge(MPI_Comm intercomm, int high, MPI_Comm *newintercomm); int MPI_Iprobe(int source, int tag, MPI_Comm comm, int *flag, MPI_Status *status); int MPI_Irecv(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Irsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Isend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Issend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Is_thread_main(int *flag); int MPI_Keyval_create(MPI_Copy_function *copy_fn, MPI_Delete_function *delete_fn, int *keyval, void *extra_state) ; int MPI_Keyval_free(int *keyval) ; int MPI_Lookup_name(char *service_name, MPI_Info info, char *port_name); int MPI_Message_c2f(MPI_Message message); MPI_Message MPI_Message_f2c(int message); int MPI_Mprobe(int source, int tag, MPI_Comm comm, MPI_Message *message, MPI_Status *status); int MPI_Mrecv(void *buf, int count, MPI_Datatype type, MPI_Message *message, MPI_Status *status); int MPI_Op_c2f(MPI_Op op); int MPI_Op_commutative(MPI_Op op, int *commute); int MPI_Op_create(MPI_User_function *function, int commute, MPI_Op *op); int MPI_Open_port(MPI_Info info, char *port_name); MPI_Op MPI_Op_f2c(int op); int MPI_Op_free(MPI_Op *op); int MPI_Pack_external(char *datarep, void *inbuf, int incount, MPI_Datatype datatype, void *outbuf, MPI_Aint outsize, MPI_Aint *position); int MPI_Pack_external_size(char *datarep, int incount, MPI_Datatype datatype, MPI_Aint *size); int MPI_Pack(void *inbuf, int incount, MPI_Datatype datatype, void *outbuf, int outsize, int *position, MPI_Comm comm); int MPI_Pack_size(int incount, MPI_Datatype datatype, MPI_Comm comm, int *size); int MPI_Pcontrol(const int level, ...); int MPI_Probe(int source, int tag, MPI_Comm comm, MPI_Status *status); int MPI_Publish_name(char *service_name, MPI_Info info, char *port_name); int MPI_Put(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Win win); int MPI_Query_thread(int *provided); int MPI_Recv_init(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Recv(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Status *status); int MPI_Reduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, int root, MPI_Comm comm); int MPI_Ireduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, int root, MPI_Comm comm, MPI_Request *request); int MPI_Reduce_local(void *inbuf, void *inoutbuf, int count, MPI_Datatype datatype, MPI_Op op); int MPI_Reduce_scatter(void *sendbuf, void *recvbuf, int *recvcounts, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int MPI_Ireduce_scatter(void *sendbuf, void *recvbuf, int *recvcounts, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int MPI_Reduce_scatter_block(void *sendbuf, void *recvbuf, int recvcount, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int MPI_Ireduce_scatter_block(void *sendbuf, void *recvbuf, int recvcount, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int MPI_Register_datarep(char *datarep, MPI_Datarep_conversion_function *read_conversion_fn, MPI_Datarep_conversion_function *write_conversion_fn, MPI_Datarep_extent_function *dtype_file_extent_fn, void *extra_state); int MPI_Request_c2f(MPI_Request request); MPI_Request MPI_Request_f2c(int request); int MPI_Request_free(MPI_Request *request); int MPI_Request_get_status(MPI_Request request, int *flag, MPI_Status *status); int MPI_Rsend(void *ibuf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int MPI_Rsend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Scan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int MPI_Iscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int MPI_Scatter(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int MPI_Iscatter(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int MPI_Scatterv(void *sendbuf, int *sendcounts, int *displs, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int MPI_Iscatterv(void *sendbuf, int *sendcounts, int *displs, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int MPI_Send_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Send(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int MPI_Sendrecv(void *sendbuf, int sendcount, MPI_Datatype sendtype, int dest, int sendtag, void *recvbuf, int recvcount, MPI_Datatype recvtype, int source, int recvtag, MPI_Comm comm, MPI_Status *status); int MPI_Sendrecv_replace(void * buf, int count, MPI_Datatype datatype, int dest, int sendtag, int source, int recvtag, MPI_Comm comm, MPI_Status *status); int MPI_Ssend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Ssend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int MPI_Start(MPI_Request *request); int MPI_Startall(int count, MPI_Request *array_of_requests); int MPI_Status_c2f(MPI_Status *c_status, int *f_status); int MPI_Status_f2c(int *f_status, MPI_Status *c_status); int MPI_Status_set_cancelled(MPI_Status *status, int flag); int MPI_Status_set_elements(MPI_Status *status, MPI_Datatype datatype, int count); int MPI_Testall(int count, MPI_Request array_of_requests[], int *flag, MPI_Status array_of_statuses[]); int MPI_Testany(int count, MPI_Request array_of_requests[], int *index, int *flag, MPI_Status *status); int MPI_Test(MPI_Request *request, int *flag, MPI_Status *status); int MPI_Test_cancelled(MPI_Status *status, int *flag); int MPI_Testsome(int incount, MPI_Request array_of_requests[], int *outcount, int array_of_indices[], MPI_Status array_of_statuses[]); int MPI_Topo_test(MPI_Comm comm, int *status); int MPI_Type_c2f(MPI_Datatype datatype); int MPI_Type_commit(MPI_Datatype *type); int MPI_Type_contiguous(int count, MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_darray(int size, int rank, int ndims, int gsize_array[], int distrib_array[], int darg_array[], int psize_array[], int order, MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_f90_complex(int p, int r, MPI_Datatype *newtype); int MPI_Type_create_f90_integer(int r, MPI_Datatype *newtype); int MPI_Type_create_f90_real(int p, int r, MPI_Datatype *newtype); int MPI_Type_create_hindexed(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_hvector(int count, int blocklength, MPI_Aint stride, MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_keyval(MPI_Type_copy_attr_function *type_copy_attr_fn, MPI_Type_delete_attr_function *type_delete_attr_fn, int *type_keyval, void *extra_state); int MPI_Type_create_indexed_block(int count, int blocklength, int array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_struct(int count, int array_of_block_lengths[], MPI_Aint array_of_displacements[], MPI_Datatype array_of_types[], MPI_Datatype *newtype); int MPI_Type_create_subarray(int ndims, int size_array[], int subsize_array[], int start_array[], int order, MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_resized(MPI_Datatype oldtype, MPI_Aint lb, MPI_Aint extent, MPI_Datatype *newtype); int MPI_Type_delete_attr(MPI_Datatype type, int type_keyval); int MPI_Type_dup(MPI_Datatype type, MPI_Datatype *newtype); int MPI_Type_extent(MPI_Datatype type, MPI_Aint *extent) ; int MPI_Type_free(MPI_Datatype *type); int MPI_Type_free_keyval(int *type_keyval); MPI_Datatype MPI_Type_f2c(int datatype); int MPI_Type_get_attr(MPI_Datatype type, int type_keyval, void *attribute_val, int *flag); int MPI_Type_get_contents(MPI_Datatype mtype, int max_integers, int max_addresses, int max_datatypes, int array_of_integers[], MPI_Aint array_of_addresses[], MPI_Datatype array_of_datatypes[]); int MPI_Type_get_envelope(MPI_Datatype type, int *num_integers, int *num_addresses, int *num_datatypes, int *combiner); int MPI_Type_get_extent(MPI_Datatype type, MPI_Aint *lb, MPI_Aint *extent); int MPI_Type_get_name(MPI_Datatype type, char *type_name, int *resultlen); int MPI_Type_get_true_extent(MPI_Datatype datatype, MPI_Aint *true_lb, MPI_Aint *true_extent); int MPI_Type_hindexed(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype) ; int MPI_Type_hvector(int count, int blocklength, MPI_Aint stride, MPI_Datatype oldtype, MPI_Datatype *newtype) ; int MPI_Type_indexed(int count, int array_of_blocklengths[], int array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_lb(MPI_Datatype type, MPI_Aint *lb) ; int MPI_Type_match_size(int typeclass, int size, MPI_Datatype *type); int MPI_Type_set_attr(MPI_Datatype type, int type_keyval, void *attr_val); int MPI_Type_set_name(MPI_Datatype type, char *type_name); int MPI_Type_size(MPI_Datatype type, int *size); int MPI_Type_struct(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype array_of_types[], MPI_Datatype *newtype) ; int MPI_Type_ub(MPI_Datatype mtype, MPI_Aint *ub) ; int MPI_Type_vector(int count, int blocklength, int stride, MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Unpack(void *inbuf, int insize, int *position, void *outbuf, int outcount, MPI_Datatype datatype, MPI_Comm comm); int MPI_Unpublish_name(char *service_name, MPI_Info info, char *port_name); int MPI_Unpack_external (char *datarep, void *inbuf, MPI_Aint insize, MPI_Aint *position, void *outbuf, int outcount, MPI_Datatype datatype); int MPI_Waitall(int count, MPI_Request *array_of_requests, MPI_Status *array_of_statuses); int MPI_Waitany(int count, MPI_Request *array_of_requests, int *index, MPI_Status *status); int MPI_Wait(MPI_Request *request, MPI_Status *status); int MPI_Waitsome(int incount, MPI_Request *array_of_requests, int *outcount, int *array_of_indices, MPI_Status *array_of_statuses); int MPI_Win_c2f(MPI_Win win); int MPI_Win_call_errhandler(MPI_Win win, int errorcode); int MPI_Win_complete(MPI_Win win); int MPI_Win_create(void *base, MPI_Aint size, int disp_unit, MPI_Info info, MPI_Comm comm, MPI_Win *win); int MPI_Win_create_errhandler(MPI_Win_errhandler_function *function, MPI_Errhandler *errhandler); int MPI_Win_create_keyval(MPI_Win_copy_attr_function *win_copy_attr_fn, MPI_Win_delete_attr_function *win_delete_attr_fn, int *win_keyval, void *extra_state); int MPI_Win_delete_attr(MPI_Win win, int win_keyval); MPI_Win MPI_Win_f2c(int win); int MPI_Win_fence(int assert, MPI_Win win); int MPI_Win_free(MPI_Win *win); int MPI_Win_free_keyval(int *win_keyval); int MPI_Win_get_attr(MPI_Win win, int win_keyval, void *attribute_val, int *flag); int MPI_Win_get_errhandler(MPI_Win win, MPI_Errhandler *errhandler); int MPI_Win_get_group(MPI_Win win, MPI_Group *group); int MPI_Win_get_name(MPI_Win win, char *win_name, int *resultlen); int MPI_Win_lock(int lock_type, int rank, int assert, MPI_Win win); int MPI_Win_post(MPI_Group group, int assert, MPI_Win win); int MPI_Win_set_attr(MPI_Win win, int win_keyval, void *attribute_val); int MPI_Win_set_errhandler(MPI_Win win, MPI_Errhandler errhandler); int MPI_Win_set_name(MPI_Win win, char *win_name); int MPI_Win_start(MPI_Group group, int assert, MPI_Win win); int MPI_Win_test(MPI_Win win, int *flag); int MPI_Win_unlock(int rank, MPI_Win win); int MPI_Win_wait(MPI_Win win); double MPI_Wtick(void); double MPI_Wtime(void); int PMPI_Abort(MPI_Comm comm, int errorcode); int PMPI_Accumulate(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Op op, MPI_Win win); int PMPI_Add_error_class(int *errorclass); int PMPI_Add_error_code(int errorclass, int *errorcode); int PMPI_Add_error_string(int errorcode, char *string); int PMPI_Address(void *location, MPI_Aint *address) ; int PMPI_Allgather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm); int PMPI_Iallgather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int PMPI_Allgatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, MPI_Comm comm); int PMPI_Iallgatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int PMPI_Alloc_mem(MPI_Aint size, MPI_Info info, void *baseptr); int PMPI_Allreduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int PMPI_Iallreduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int PMPI_Alltoall(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm); int PMPI_Ialltoall(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int PMPI_Alltoallv(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype recvtype, MPI_Comm comm); int PMPI_Ialltoallv(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int PMPI_Alltoallw(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype *sendtypes, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype *recvtypes, MPI_Comm comm); int PMPI_Ialltoallw(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype *sendtypes, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype *recvtypes, MPI_Comm comm, MPI_Request *request); int PMPI_Attr_delete(MPI_Comm comm, int keyval) ; int PMPI_Attr_get(MPI_Comm comm, int keyval, void *attribute_val, int *flag) ; int PMPI_Dist_graph_create(MPI_Comm comm_old, int n, int nodes[], int degrees[], int targets[], int weights[], MPI_Info info, int reorder, MPI_Comm * newcomm); int PMPI_Dist_graph_create_adjacent(MPI_Comm comm_old, int indegree, int sources[], int sourceweights[], int outdegree, int destinations[], int destweights[], MPI_Info info, int reorder, MPI_Comm *comm_dist_graph); int PMPI_Dist_graph_neighbors(MPI_Comm comm, int maxindegree, int sources[], int sourceweights[], int maxoutdegree, int destinations[], int destweights[]); int PMPI_Dist_graph_neighbors_count(MPI_Comm comm, int *inneighbors, int *outneighbors, int *weighted); int PMPI_Attr_put(MPI_Comm comm, int keyval, void *attribute_val) ; int PMPI_Barrier(MPI_Comm comm); int PMPI_Ibarrier(MPI_Comm comm, MPI_Request *request); int PMPI_Bcast(void *buffer, int count, MPI_Datatype datatype, int root, MPI_Comm comm); int PMPI_Ibcast(void *buffer, int count, MPI_Datatype datatype, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Bsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int PMPI_Bsend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Buffer_attach(void *buffer, int size); int PMPI_Buffer_detach(void *buffer, int *size); int PMPI_Cancel(MPI_Request *request); int PMPI_Cart_coords(MPI_Comm comm, int rank, int maxdims, int *coords); int PMPI_Cart_create(MPI_Comm old_comm, int ndims, int *dims, int *periods, int reorder, MPI_Comm *comm_cart); int PMPI_Cart_get(MPI_Comm comm, int maxdims, int *dims, int *periods, int *coords); int PMPI_Cart_map(MPI_Comm comm, int ndims, int *dims, int *periods, int *newrank); int PMPI_Cart_rank(MPI_Comm comm, int *coords, int *rank); int PMPI_Cart_shift(MPI_Comm comm, int direction, int disp, int *rank_source, int *rank_dest); int PMPI_Cart_sub(MPI_Comm comm, int *remain_dims, MPI_Comm *new_comm); int PMPI_Cartdim_get(MPI_Comm comm, int *ndims); int PMPI_Close_port(char *port_name); int PMPI_Comm_accept(char *port_name, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *newcomm); int PMPI_Comm_c2f(MPI_Comm comm); int PMPI_Comm_call_errhandler(MPI_Comm comm, int errorcode); int PMPI_Comm_compare(MPI_Comm comm1, MPI_Comm comm2, int *result); int PMPI_Comm_connect(char *port_name, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *newcomm); int PMPI_Comm_create_errhandler(MPI_Comm_errhandler_function *function, MPI_Errhandler *errhandler); int PMPI_Comm_create_keyval(MPI_Comm_copy_attr_function *comm_copy_attr_fn, MPI_Comm_delete_attr_function *comm_delete_attr_fn, int *comm_keyval, void *extra_state); int PMPI_Comm_create(MPI_Comm comm, MPI_Group group, MPI_Comm *newcomm); int PMPI_Comm_delete_attr(MPI_Comm comm, int comm_keyval); int PMPI_Comm_disconnect(MPI_Comm *comm); int PMPI_Comm_dup(MPI_Comm comm, MPI_Comm *newcomm); MPI_Comm PMPI_Comm_f2c(int comm); int PMPI_Comm_free_keyval(int *comm_keyval); int PMPI_Comm_free(MPI_Comm *comm); int PMPI_Comm_get_attr(MPI_Comm comm, int comm_keyval, void *attribute_val, int *flag); int PMPI_Comm_get_errhandler(MPI_Comm comm, MPI_Errhandler *erhandler); int PMPI_Comm_get_name(MPI_Comm comm, char *comm_name, int *resultlen); int PMPI_Comm_get_parent(MPI_Comm *parent); int PMPI_Comm_group(MPI_Comm comm, MPI_Group *group); int PMPI_Comm_join(int fd, MPI_Comm *intercomm); int PMPI_Comm_rank(MPI_Comm comm, int *rank); int PMPI_Comm_remote_group(MPI_Comm comm, MPI_Group *group); int PMPI_Comm_remote_size(MPI_Comm comm, int *size); int PMPI_Comm_set_attr(MPI_Comm comm, int comm_keyval, void *attribute_val); int PMPI_Comm_set_errhandler(MPI_Comm comm, MPI_Errhandler errhandler); int PMPI_Comm_set_name(MPI_Comm comm, char *comm_name); int PMPI_Comm_size(MPI_Comm comm, int *size); int PMPI_Comm_spawn(char *command, char **argv, int maxprocs, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *intercomm, int *array_of_errcodes); int PMPI_Comm_spawn_multiple(int count, char **array_of_commands, char ***array_of_argv, int *array_of_maxprocs, MPI_Info *array_of_info, int root, MPI_Comm comm, MPI_Comm *intercomm, int *array_of_errcodes); int PMPI_Comm_split(MPI_Comm comm, int color, int key, MPI_Comm *newcomm); int PMPI_Comm_test_inter(MPI_Comm comm, int *flag); int PMPI_Dims_create(int nnodes, int ndims, int *dims); int PMPI_Errhandler_c2f(MPI_Errhandler errhandler); int PMPI_Errhandler_create(MPI_Handler_function *function, MPI_Errhandler *errhandler) ; MPI_Errhandler PMPI_Errhandler_f2c(int errhandler); int PMPI_Errhandler_free(MPI_Errhandler *errhandler); int PMPI_Errhandler_get(MPI_Comm comm, MPI_Errhandler *errhandler) ; int PMPI_Errhandler_set(MPI_Comm comm, MPI_Errhandler errhandler) ; int PMPI_Error_class(int errorcode, int *errorclass); int PMPI_Error_string(int errorcode, char *string, int *resultlen); int PMPI_Exscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int PMPI_Iexscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int PMPI_File_c2f(MPI_File file); MPI_File PMPI_File_f2c(int file); int PMPI_File_call_errhandler(MPI_File fh, int errorcode); int PMPI_File_create_errhandler(MPI_File_errhandler_function *function, MPI_Errhandler *errhandler); int PMPI_File_set_errhandler( MPI_File file, MPI_Errhandler errhandler); int PMPI_File_get_errhandler( MPI_File file, MPI_Errhandler *errhandler); int PMPI_File_open(MPI_Comm comm, char *filename, int amode, MPI_Info info, MPI_File *fh); int PMPI_File_close(MPI_File *fh); int PMPI_File_delete(char *filename, MPI_Info info); int PMPI_File_set_size(MPI_File fh, MPI_Offset size); int PMPI_File_preallocate(MPI_File fh, MPI_Offset size); int PMPI_File_get_size(MPI_File fh, MPI_Offset *size); int PMPI_File_get_group(MPI_File fh, MPI_Group *group); int PMPI_File_get_amode(MPI_File fh, int *amode); int PMPI_File_set_info(MPI_File fh, MPI_Info info); int PMPI_File_get_info(MPI_File fh, MPI_Info *info_used); int PMPI_File_set_view(MPI_File fh, MPI_Offset disp, MPI_Datatype etype, MPI_Datatype filetype, char *datarep, MPI_Info info); int PMPI_File_get_view(MPI_File fh, MPI_Offset *disp, MPI_Datatype *etype, MPI_Datatype *filetype, char *datarep); int PMPI_File_read_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_read_at_all(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write_at_all(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_iread_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_iwrite_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_read(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_read_all(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write_all(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_iread(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_iwrite(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_seek(MPI_File fh, MPI_Offset offset, int whence); int PMPI_File_get_position(MPI_File fh, MPI_Offset *offset); int PMPI_File_get_byte_offset(MPI_File fh, MPI_Offset offset, MPI_Offset *disp); int PMPI_File_read_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_iread_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_iwrite_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_read_ordered(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write_ordered(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_seek_shared(MPI_File fh, MPI_Offset offset, int whence); int PMPI_File_get_position_shared(MPI_File fh, MPI_Offset *offset); int PMPI_File_read_at_all_begin(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype); int PMPI_File_read_at_all_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_write_at_all_begin(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype); int PMPI_File_write_at_all_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_read_all_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int PMPI_File_read_all_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_write_all_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int PMPI_File_write_all_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_read_ordered_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int PMPI_File_read_ordered_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_write_ordered_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int PMPI_File_write_ordered_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_get_type_extent(MPI_File fh, MPI_Datatype datatype, MPI_Aint *extent); int PMPI_File_set_atomicity(MPI_File fh, int flag); int PMPI_File_get_atomicity(MPI_File fh, int *flag); int PMPI_File_sync(MPI_File fh); int PMPI_Finalize(void); int PMPI_Finalized(int *flag); int PMPI_Free_mem(void *base); int PMPI_Gather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int PMPI_Igather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Gatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, int root, MPI_Comm comm); int PMPI_Igatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Get_address(void *location, MPI_Aint *address); int PMPI_Get_count(MPI_Status *status, MPI_Datatype datatype, int *count); int PMPI_Get_elements(MPI_Status *status, MPI_Datatype datatype, int *count); int PMPI_Get(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Win win); int PMPI_Get_processor_name(char *name, int *resultlen); int PMPI_Get_version(int *version, int *subversion); int PMPI_Graph_create(MPI_Comm comm_old, int nnodes, int *index, int *edges, int reorder, MPI_Comm *comm_graph); int PMPI_Graph_get(MPI_Comm comm, int maxindex, int maxedges, int *index, int *edges); int PMPI_Graph_map(MPI_Comm comm, int nnodes, int *index, int *edges, int *newrank); int PMPI_Graph_neighbors_count(MPI_Comm comm, int rank, int *nneighbors); int PMPI_Graph_neighbors(MPI_Comm comm, int rank, int maxneighbors, int *neighbors); int PMPI_Graphdims_get(MPI_Comm comm, int *nnodes, int *nedges); int PMPI_Grequest_complete(MPI_Request request); int PMPI_Grequest_start(MPI_Grequest_query_function *query_fn, MPI_Grequest_free_function *free_fn, MPI_Grequest_cancel_function *cancel_fn, void *extra_state, MPI_Request *request); int PMPI_Group_c2f(MPI_Group group); int PMPI_Group_compare(MPI_Group group1, MPI_Group group2, int *result); int PMPI_Group_difference(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int PMPI_Group_excl(MPI_Group group, int n, int *ranks, MPI_Group *newgroup); MPI_Group PMPI_Group_f2c(int group); int PMPI_Group_free(MPI_Group *group); int PMPI_Group_incl(MPI_Group group, int n, int *ranks, MPI_Group *newgroup); int PMPI_Group_intersection(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int PMPI_Group_range_excl(MPI_Group group, int n, int ranges[][3], MPI_Group *newgroup); int PMPI_Group_range_incl(MPI_Group group, int n, int ranges[][3], MPI_Group *newgroup); int PMPI_Group_rank(MPI_Group group, int *rank); int PMPI_Group_size(MPI_Group group, int *size); int PMPI_Group_translate_ranks(MPI_Group group1, int n, int *ranks1, MPI_Group group2, int *ranks2); int PMPI_Group_union(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int PMPI_Ibsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Improbe(int source, int tag, MPI_Comm comm, int *flag, MPI_Message *message, MPI_Status *status); int PMPI_Imrecv(void *buf, int count, MPI_Datatype type, MPI_Message *message, MPI_Request *request); int PMPI_Info_c2f(MPI_Info info); int PMPI_Info_create(MPI_Info *info); int PMPI_Info_delete(MPI_Info info, char *key); int PMPI_Info_dup(MPI_Info info, MPI_Info *newinfo); MPI_Info PMPI_Info_f2c(int info); int PMPI_Info_free(MPI_Info *info); int PMPI_Info_get(MPI_Info info, char *key, int valuelen, char *value, int *flag); int PMPI_Info_get_nkeys(MPI_Info info, int *nkeys); int PMPI_Info_get_nthkey(MPI_Info info, int n, char *key); int PMPI_Info_get_valuelen(MPI_Info info, char *key, int *valuelen, int *flag); int PMPI_Info_set(MPI_Info info, char *key, char *value); int PMPI_Init(int *argc, char ***argv); int PMPI_Initialized(int *flag); int PMPI_Init_thread(int *argc, char ***argv, int required, int *provided); int PMPI_Intercomm_create(MPI_Comm local_comm, int local_leader, MPI_Comm bridge_comm, int remote_leader, int tag, MPI_Comm *newintercomm); int PMPI_Intercomm_merge(MPI_Comm intercomm, int high, MPI_Comm *newintercomm); int PMPI_Iprobe(int source, int tag, MPI_Comm comm, int *flag, MPI_Status *status); int PMPI_Irecv(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Irsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Isend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Issend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Is_thread_main(int *flag); int PMPI_Keyval_create(MPI_Copy_function *copy_fn, MPI_Delete_function *delete_fn, int *keyval, void *extra_state) ; int PMPI_Keyval_free(int *keyval) ; int PMPI_Lookup_name(char *service_name, MPI_Info info, char *port_name); int PMPI_Message_c2f(MPI_Message message); MPI_Message PMPI_Message_f2c(int message); int PMPI_Mprobe(int source, int tag, MPI_Comm comm, MPI_Message *message, MPI_Status *status); int PMPI_Mrecv(void *buf, int count, MPI_Datatype type, MPI_Message *message, MPI_Status *status); int PMPI_Op_c2f(MPI_Op op); int PMPI_Op_commutative(MPI_Op op, int *commute); int PMPI_Op_create(MPI_User_function *function, int commute, MPI_Op *op); int PMPI_Open_port(MPI_Info info, char *port_name); MPI_Op PMPI_Op_f2c(int op); int PMPI_Op_free(MPI_Op *op); int PMPI_Pack_external(char *datarep, void *inbuf, int incount, MPI_Datatype datatype, void *outbuf, MPI_Aint outsize, MPI_Aint *position); int PMPI_Pack_external_size(char *datarep, int incount, MPI_Datatype datatype, MPI_Aint *size); int PMPI_Pack(void *inbuf, int incount, MPI_Datatype datatype, void *outbuf, int outsize, int *position, MPI_Comm comm); int PMPI_Pack_size(int incount, MPI_Datatype datatype, MPI_Comm comm, int *size); int PMPI_Pcontrol(const int level, ...); int PMPI_Probe(int source, int tag, MPI_Comm comm, MPI_Status *status); int PMPI_Publish_name(char *service_name, MPI_Info info, char *port_name); int PMPI_Put(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Win win); int PMPI_Query_thread(int *provided); int PMPI_Recv_init(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Recv(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Status *status); int PMPI_Reduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, int root, MPI_Comm comm); int PMPI_Ireduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Reduce_local(void *inbuf, void *inoutbuf, int count, MPI_Datatype datatype, MPI_Op); int PMPI_Reduce_scatter(void *sendbuf, void *recvbuf, int *recvcounts, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int PMPI_Ireduce_scatter(void *sendbuf, void *recvbuf, int *recvcounts, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int PMPI_Reduce_scatter_block(void *sendbuf, void *recvbuf, int recvcount, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int PMPI_Ireduce_scatter_block(void *sendbuf, void *recvbuf, int recvcount, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int PMPI_Register_datarep(char *datarep, MPI_Datarep_conversion_function *read_conversion_fn, MPI_Datarep_conversion_function *write_conversion_fn, MPI_Datarep_extent_function *dtype_file_extent_fn, void *extra_state); int PMPI_Request_c2f(MPI_Request request); MPI_Request PMPI_Request_f2c(int request); int PMPI_Request_free(MPI_Request *request); int PMPI_Request_get_status(MPI_Request request, int *flag, MPI_Status *status); int PMPI_Rsend(void *ibuf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int PMPI_Rsend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Scan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int PMPI_Iscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int PMPI_Scatter(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int PMPI_Iscatter(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Scatterv(void *sendbuf, int *sendcounts, int *displs, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int PMPI_Iscatterv(void *sendbuf, int *sendcounts, int *displs, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Send_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Send(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int PMPI_Sendrecv(void *sendbuf, int sendcount, MPI_Datatype sendtype, int dest, int sendtag, void *recvbuf, int recvcount, MPI_Datatype recvtype, int source, int recvtag, MPI_Comm comm, MPI_Status *status); int PMPI_Sendrecv_replace(void * buf, int count, MPI_Datatype datatype, int dest, int sendtag, int source, int recvtag, MPI_Comm comm, MPI_Status *status); int PMPI_Ssend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Ssend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int PMPI_Start(MPI_Request *request); int PMPI_Startall(int count, MPI_Request *array_of_requests); int PMPI_Status_c2f(MPI_Status *c_status, int *f_status); int PMPI_Status_f2c(int *f_status, MPI_Status *c_status); int PMPI_Status_set_cancelled(MPI_Status *status, int flag); int PMPI_Status_set_elements(MPI_Status *status, MPI_Datatype datatype, int count); int PMPI_Testall(int count, MPI_Request array_of_requests[], int *flag, MPI_Status array_of_statuses[]); int PMPI_Testany(int count, MPI_Request array_of_requests[], int *index, int *flag, MPI_Status *status); int PMPI_Test(MPI_Request *request, int *flag, MPI_Status *status); int PMPI_Test_cancelled(MPI_Status *status, int *flag); int PMPI_Testsome(int incount, MPI_Request array_of_requests[], int *outcount, int array_of_indices[], MPI_Status array_of_statuses[]); int PMPI_Topo_test(MPI_Comm comm, int *status); int PMPI_Type_c2f(MPI_Datatype datatype); int PMPI_Type_commit(MPI_Datatype *type); int PMPI_Type_contiguous(int count, MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_darray(int size, int rank, int ndims, int gsize_array[], int distrib_array[], int darg_array[], int psize_array[], int order, MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_f90_complex(int p, int r, MPI_Datatype *newtype); int PMPI_Type_create_f90_integer(int r, MPI_Datatype *newtype); int PMPI_Type_create_f90_real(int p, int r, MPI_Datatype *newtype); int PMPI_Type_create_hindexed(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_hvector(int count, int blocklength, MPI_Aint stride, MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_keyval(MPI_Type_copy_attr_function *type_copy_attr_fn, MPI_Type_delete_attr_function *type_delete_attr_fn, int *type_keyval, void *extra_state); int PMPI_Type_create_indexed_block(int count, int blocklength, int array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_struct(int count, int array_of_block_lengths[], MPI_Aint array_of_displacements[], MPI_Datatype array_of_types[], MPI_Datatype *newtype); int PMPI_Type_create_subarray(int ndims, int size_array[], int subsize_array[], int start_array[], int order, MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_resized(MPI_Datatype oldtype, MPI_Aint lb, MPI_Aint extent, MPI_Datatype *newtype); int PMPI_Type_delete_attr(MPI_Datatype type, int type_keyval); int PMPI_Type_dup(MPI_Datatype type, MPI_Datatype *newtype); int PMPI_Type_extent(MPI_Datatype type, MPI_Aint *extent) ; int PMPI_Type_free(MPI_Datatype *type); int PMPI_Type_free_keyval(int *type_keyval); MPI_Datatype PMPI_Type_f2c(int datatype); int PMPI_Type_get_attr(MPI_Datatype type, int type_keyval, void *attribute_val, int *flag); int PMPI_Type_get_contents(MPI_Datatype mtype, int max_integers, int max_addresses, int max_datatypes, int array_of_integers[], MPI_Aint array_of_addresses[], MPI_Datatype array_of_datatypes[]); int PMPI_Type_get_envelope(MPI_Datatype type, int *num_integers, int *num_addresses, int *num_datatypes, int *combiner); int PMPI_Type_get_extent(MPI_Datatype type, MPI_Aint *lb, MPI_Aint *extent); int PMPI_Type_get_name(MPI_Datatype type, char *type_name, int *resultlen); int PMPI_Type_get_true_extent(MPI_Datatype datatype, MPI_Aint *true_lb, MPI_Aint *true_extent); int PMPI_Type_hindexed(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype) ; int PMPI_Type_hvector(int count, int blocklength, MPI_Aint stride, MPI_Datatype oldtype, MPI_Datatype *newtype) ; int PMPI_Type_indexed(int count, int array_of_blocklengths[], int array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_lb(MPI_Datatype type, MPI_Aint *lb) ; int PMPI_Type_match_size(int typeclass, int size, MPI_Datatype *type); int PMPI_Type_set_attr(MPI_Datatype type, int type_keyval, void *attr_val); int PMPI_Type_set_name(MPI_Datatype type, char *type_name); int PMPI_Type_size(MPI_Datatype type, int *size); int PMPI_Type_struct(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype array_of_types[], MPI_Datatype *newtype) ; int PMPI_Type_ub(MPI_Datatype mtype, MPI_Aint *ub) ; int PMPI_Type_vector(int count, int blocklength, int stride, MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Unpack(void *inbuf, int insize, int *position, void *outbuf, int outcount, MPI_Datatype datatype, MPI_Comm comm); int PMPI_Unpublish_name(char *service_name, MPI_Info info, char *port_name); int PMPI_Unpack_external (char *datarep, void *inbuf, MPI_Aint insize, MPI_Aint *position, void *outbuf, int outcount, MPI_Datatype datatype); int PMPI_Waitall(int count, MPI_Request *array_of_requests, MPI_Status *array_of_statuses); int PMPI_Waitany(int count, MPI_Request *array_of_requests, int *index, MPI_Status *status); int PMPI_Wait(MPI_Request *request, MPI_Status *status); int PMPI_Waitsome(int incount, MPI_Request *array_of_requests, int *outcount, int *array_of_indices, MPI_Status *array_of_statuses); int PMPI_Win_c2f(MPI_Win win); int PMPI_Win_call_errhandler(MPI_Win win, int errorcode); int PMPI_Win_complete(MPI_Win win); int PMPI_Win_create(void *base, MPI_Aint size, int disp_unit, MPI_Info info, MPI_Comm comm, MPI_Win *win); int PMPI_Win_create_errhandler(MPI_Win_errhandler_function *function, MPI_Errhandler *errhandler); int PMPI_Win_create_keyval(MPI_Win_copy_attr_function *win_copy_attr_fn, MPI_Win_delete_attr_function *win_delete_attr_fn, int *win_keyval, void *extra_state); int PMPI_Win_delete_attr(MPI_Win win, int win_keyval); MPI_Win PMPI_Win_f2c(int win); int PMPI_Win_fence(int assert, MPI_Win win); int PMPI_Win_free(MPI_Win *win); int PMPI_Win_free_keyval(int *win_keyval); int PMPI_Win_get_attr(MPI_Win win, int win_keyval, void *attribute_val, int *flag); int PMPI_Win_get_errhandler(MPI_Win win, MPI_Errhandler *errhandler); int PMPI_Win_get_group(MPI_Win win, MPI_Group *group); int PMPI_Win_get_name(MPI_Win win, char *win_name, int *resultlen); int PMPI_Win_lock(int lock_type, int rank, int assert, MPI_Win win); int PMPI_Win_post(MPI_Group group, int assert, MPI_Win win); int PMPI_Win_set_attr(MPI_Win win, int win_keyval, void *attribute_val); int PMPI_Win_set_errhandler(MPI_Win win, MPI_Errhandler errhandler); int PMPI_Win_set_name(MPI_Win win, char *win_name); int PMPI_Win_start(MPI_Group group, int assert, MPI_Win win); int PMPI_Win_test(MPI_Win win, int *flag); int PMPI_Win_unlock(int rank, MPI_Win win); int PMPI_Win_wait(MPI_Win win); double PMPI_Wtick(void); double PMPI_Wtime(void); #line 2281 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Found header files ['mpi.h'] in [] Popping language C ================================================================================ TEST configureConversion from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:212) TESTING: configureConversion from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:212) Check for the functions which convert communicators between C and Fortran - Define HAVE_MPI_COMM_F2C and HAVE_MPI_COMM_C2F if they are present - Some older MPI 1 implementations are missing these All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { if (MPI_Comm_f2c((MPI_Fint)0)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_MPI_COMM_F2C" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { if (MPI_Comm_c2f(MPI_COMM_WORLD)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_MPI_COMM_C2F" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c", line 6: warning: variable "a" was declared but never referenced MPI_Fint a; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_Fint a; ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_MPI_FINT" to "1" ================================================================================ TEST configureMPI2 from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:180) TESTING: configureMPI2 from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:180) Check for functions added to the interface in MPI-2 Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int flag;if (MPI_Finalized(&flag)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_MPI_FINALIZED" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { if (MPI_Allreduce(MPI_IN_PLACE,0, 1, MPI_INT, MPI_SUM, MPI_COMM_SELF)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_MPI_IN_PLACE" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c", line 6: warning: a value of type "int" cannot be used to initialize an entity of type "MPI_Datatype" int count=2; int blocklens[2]={0,1}; MPI_Aint indices[2]={0,1}; MPI_Datatype old_types[2]={0,1}; MPI_Datatype *newtype = 0; ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c", line 6: warning: conversion of nonzero integer to pointer int count=2; int blocklens[2]={0,1}; MPI_Aint indices[2]={0,1}; MPI_Datatype old_types[2]={0,1}; MPI_Datatype *newtype = 0; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { int count=2; int blocklens[2]={0,1}; MPI_Aint indices[2]={0,1}; MPI_Datatype old_types[2]={0,1}; MPI_Datatype *newtype = 0; if (MPI_Type_create_struct(count, blocklens, indices, old_types, newtype)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_Comm_errhandler_fn * p_err_fun = 0; MPI_Errhandler * p_errhandler = 0; if (MPI_Comm_create_errhandler(p_err_fun,p_errhandler)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { if (MPI_Comm_set_errhandler(MPI_COMM_WORLD,MPI_ERRORS_RETURN)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl ================================================================================ TEST configureTypes from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:232) TESTING: configureTypes from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:232) Checking for MPI types Checking for size of type: MPI_Comm Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif #define MPICH_IGNORE_CXX_SEEK #define MPICH_SKIP_MPICXX 1 #define OMPI_SKIP_MPICXX 1 #include int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(MPI_Comm)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Popping language C Defined "SIZEOF_MPI_COMM" to "8" Checking for size of type: MPI_Fint Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif #define MPICH_IGNORE_CXX_SEEK #define MPICH_SKIP_MPICXX 1 #define OMPI_SKIP_MPICXX 1 #include int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(MPI_Fint)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Popping language C Defined "SIZEOF_MPI_FINT" to "4" ================================================================================ TEST configureMPITypes from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:244) TESTING: configureMPITypes from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:244) Checking for MPI Datatype handles Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif #include int main() { MPI_Aint size; int ierr; MPI_Init(0,0); ierr = MPI_Type_extent(MPI_LONG_DOUBLE, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif #include int main() { MPI_Aint size; int ierr; MPI_Init(0,0); ierr = MPI_Type_extent(MPI_LONG_DOUBLE, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest ERROR while running executable: Could not execute "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest": [d01-037:17214] [mpi::ess-ple::jrm-init-failure] [[INVALID],INVALID] Error caused by PLE. [errno:26674688] [d01-037:17214] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_errmgr_base_error_abort+0x84) [0xffffffff10e58404] [d01-037:17214] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0 [0xffffffff10e5b220] [d01-037:17214] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_init+0x120) [0xffffffff10e1aa60] [d01-037:17214] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(ompi_mpi_init+0x228) [0xffffffff10bfbe28] [d01-037:17214] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(MPI_Init+0x144) [0xffffffff10c2c804] [d01-037:17214] /opt/FJSVtclang/GM-1.2.0-20/lib64/libtrtmet_c.so.1(MPI_Init+0x2c) [0xffffffff0015d668] [d01-037:17214] /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest(main+0x14) [0x100d14] [d01-037:17214] /lib64/libc.so.6(__libc_start_main+0x194) [0xffffffff1261b81c] [d01-037:17214] /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest [0x100bac] [d01-037:17214] [mpi::ess-ple::init-failure] [[INVALID],INVALID] PLE is not yet initialized. Popping language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif #include int main() { MPI_Aint size; int ierr; MPI_Init(0,0); ierr = MPI_Type_extent(MPI_INT64_T, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif #include int main() { MPI_Aint size; int ierr; MPI_Init(0,0); ierr = MPI_Type_extent(MPI_INT64_T, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest ERROR while running executable: Could not execute "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest": [d01-037:17243] [mpi::ess-ple::jrm-init-failure] [[INVALID],INVALID] Error caused by PLE. [errno:26674688] [d01-037:17243] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_errmgr_base_error_abort+0x84) [0xffffffff10e58404] [d01-037:17243] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0 [0xffffffff10e5b220] [d01-037:17243] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_init+0x120) [0xffffffff10e1aa60] [d01-037:17243] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(ompi_mpi_init+0x228) [0xffffffff10bfbe28] [d01-037:17243] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(MPI_Init+0x144) [0xffffffff10c2c804] [d01-037:17243] /opt/FJSVtclang/GM-1.2.0-20/lib64/libtrtmet_c.so.1(MPI_Init+0x2c) [0xffffffff0015d668] [d01-037:17243] /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest(main+0x14) [0x100d14] [d01-037:17243] /lib64/libc.so.6(__libc_start_main+0x194) [0xffffffff1261b81c] [d01-037:17243] /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest [0x100bac] [d01-037:17243] [mpi::ess-ple::init-failure] [[INVALID],INVALID] PLE is not yet initialized. Popping language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif #include int main() { MPI_Aint size; int ierr; MPI_Init(0,0); ierr = MPI_Type_extent(MPI_C_DOUBLE_COMPLEX, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif #include int main() { MPI_Aint size; int ierr; MPI_Init(0,0); ierr = MPI_Type_extent(MPI_C_DOUBLE_COMPLEX, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest ERROR while running executable: Could not execute "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest": [d01-037:17272] [mpi::ess-ple::jrm-init-failure] [[INVALID],INVALID] Error caused by PLE. [errno:26674688] [d01-037:17272] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_errmgr_base_error_abort+0x84) [0xffffffff10e58404] [d01-037:17272] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0 [0xffffffff10e5b220] [d01-037:17272] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_init+0x120) [0xffffffff10e1aa60] [d01-037:17272] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(ompi_mpi_init+0x228) [0xffffffff10bfbe28] [d01-037:17272] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(MPI_Init+0x144) [0xffffffff10c2c804] [d01-037:17272] /opt/FJSVtclang/GM-1.2.0-20/lib64/libtrtmet_c.so.1(MPI_Init+0x2c) [0xffffffff0015d668] [d01-037:17272] /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest(main+0x14) [0x100d14] [d01-037:17272] /lib64/libc.so.6(__libc_start_main+0x194) [0xffffffff1261b81c] [d01-037:17272] /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest [0x100bac] [d01-037:17272] [mpi::ess-ple::init-failure] [[INVALID],INVALID] PLE is not yet initialized. Popping language C ================================================================================ TEST configureMissingPrototypes from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:318) TESTING: configureMissingPrototypes from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:318) Checks for missing prototypes, which it adds to petscfix.h ================================================================================ TEST SGIMPICheck from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:337) TESTING: SGIMPICheck from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:337) Returns true if SGI MPI is used Checking for functions [MPI_SGI_barrier] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_SGI_barrier(); static void _check_MPI_SGI_barrier() { MPI_SGI_barrier(); } int main() { _check_MPI_SGI_barrier();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o: In function `_check_MPI_SGI_barrier': conftest.c:(.text+0x4): undefined reference to `MPI_SGI_barrier' Popping language C SGI MPI test failure ================================================================================ TEST CxxMPICheck from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:347) TESTING: CxxMPICheck from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:347) Make sure C++ can compile and link Pushing language Cxx Checking for header mpi.h Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { ; return 0; } Checking for C++ MPI_Finalize() Checking for functions [MPI_Finalize] in library [] [] Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.cc Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.cc", line 5: warning: variable "ierr" was set but never used static void _check_MPI_Finalize() { int ierr; ^ Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_MPI_Finalize() { int ierr; ierr = MPI_Finalize();; } int main() { _check_MPI_Finalize();; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language Cxx Popping language Cxx ================================================================================ TEST FortranMPICheck from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:365) TESTING: FortranMPICheck from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:365) Make sure fortran include [mpif.h] and library symbols are found Pushing language FC Checking for header mpif.h Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.F Successful compile: Source: program main #include "mpif.h" end Checking for fortran mpi_init() Checking for functions [] in library [] [] Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.F Successful compile: Source: program main #include "mpif.h" integer ierr call mpi_init(ierr) end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language FC Checking for mpi.mod Checking for functions [] in library [] [] Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.F Successful compile: Source: program main use mpi integer ierr,rank call mpi_init(ierr) call mpi_comm_rank(MPI_COMM_WORLD,rank,ierr) end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language FC Defined "HAVE_MPI_F90MODULE" to "1" Popping language FC ================================================================================ TEST configureIO from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:390) TESTING: configureIO from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:390) Check for the functions in MPI/IO - Define HAVE_MPIIO if they are present - Some older MPI 1 implementations are missing these Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_Aint lb, extent; if (MPI_Type_get_extent(MPI_INT, &lb, &extent)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c", line 9: warning: variable "fh" is used before its value is set if (MPI_File_write_all(fh, buf, 1, MPI_INT, &status)); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c", line 9: warning: variable "buf" is used before its value is set if (MPI_File_write_all(fh, buf, 1, MPI_INT, &status)); ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_File fh; void *buf; MPI_Status status; if (MPI_File_write_all(fh, buf, 1, MPI_INT, &status)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c", line 9: warning: variable "fh" is used before its value is set if (MPI_File_read_all(fh, buf, 1, MPI_INT, &status)); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c", line 9: warning: variable "buf" is used before its value is set if (MPI_File_read_all(fh, buf, 1, MPI_INT, &status)); ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_File fh; void *buf; MPI_Status status; if (MPI_File_read_all(fh, buf, 1, MPI_INT, &status)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c", line 9: warning: variable "fh" is used before its value is set if (MPI_File_set_view(fh, disp, MPI_INT, MPI_INT, "", info)); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c", line 9: warning: variable "disp" is used before its value is set if (MPI_File_set_view(fh, disp, MPI_INT, MPI_INT, "", info)); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c", line 9: warning: variable "info" is used before its value is set if (MPI_File_set_view(fh, disp, MPI_INT, MPI_INT, "", info)); ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_File fh; MPI_Offset disp; MPI_Info info; if (MPI_File_set_view(fh, disp, MPI_INT, MPI_INT, "", info)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c", line 8: warning: variable "info" is used before its value is set if (MPI_File_open(MPI_COMM_SELF, "", 0, info, &fh)); ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_File fh; MPI_Info info; if (MPI_File_open(MPI_COMM_SELF, "", 0, info, &fh)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c", line 7: warning: variable "info" was declared but never referenced MPI_Info info; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_File fh; MPI_Info info; if (MPI_File_close(&fh)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_MPIIO" to "1" ================================================================================ TEST findMPIInc from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:452) TESTING: findMPIInc from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:452) Find MPI include paths from "mpicc -show" Executing: mpifcc -show stdout: /opt/FJSVtclang/GM-1.2.0-20/bin/fcc -Kident_mpi -mt -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lm -lnsl -lutil compilers: Checking arg /opt/FJSVtclang/GM-1.2.0-20/bin/fcc compilers: Checking arg -Kident_mpi compilers: Checking arg -mt compilers: Checking arg -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu compilers: Found include directory: /opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu compilers: Checking arg -L/opt/FJSVpxtof/sparc64fx/lib64 compilers: Checking arg -L/opt/FJSVtclang/GM-1.2.0-20/lib64 compilers: Checking arg -lmpi compilers: Checking arg -ltofucom compilers: Checking arg -ltofutop compilers: Checking arg -lm compilers: Checking arg -lnsl compilers: Checking arg -lutil ================================================================================ TEST checkMPICHorOpenMPI from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:427) TESTING: checkMPICHorOpenMPI from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:427) Determine if MPICH_NUMVERSION or OMPI_MAJOR_VERSION exist in mpi.h Used for consistency checking of MPI installation at compile time Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Possible ERROR while running compiler: exit code 512 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c", line 4: error: identifier "MPICH_NUMVERSION" is undefined int mpich_ver = MPICH_NUMVERSION; ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include int mpich_ver = MPICH_NUMVERSION; int main() { ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int ompi_major = OMPI_MAJOR_VERSION; int ompi_minor = OMPI_MINOR_VERSION; int ompi_release = OMPI_RELEASE_VERSION; int main() { ; return 0; } Source: #include "confdefs.h" #include "conffix.h" #include int ompi_major = OMPI_MAJOR_VERSION; int ompi_minor = OMPI_MINOR_VERSION; int ompi_release = OMPI_RELEASE_VERSION; Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c" #line 1 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 212 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef long ptrdiff_t; #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef int wchar_t; #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 225 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 1 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi_portable_platform.h" #line 343 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi_portable_platform.h" #line 386 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi_portable_platform.h" #line 258 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 278 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" typedef ptrdiff_t MPI_Aint; typedef long long MPI_Offset; typedef struct ompi_communicator_t *MPI_Comm; typedef struct ompi_datatype_t *MPI_Datatype; typedef struct ompi_errhandler_t *MPI_Errhandler; typedef struct ompi_file_t *MPI_File; typedef struct ompi_group_t *MPI_Group; typedef struct ompi_info_t *MPI_Info; typedef struct ompi_op_t *MPI_Op; typedef struct ompi_request_t *MPI_Request; typedef struct ompi_message_t *MPI_Message; typedef struct ompi_status_public_t MPI_Status; typedef struct ompi_win_t *MPI_Win; #pragma pack(4) struct ompi_status_public_t { int MPI_SOURCE; int MPI_TAG; int MPI_ERROR; unsigned long _cancelled : 1; unsigned long _ucount : 63; }; #pragma pack() typedef struct ompi_status_public_t ompi_status_public_t; typedef int (MPI_Copy_function)(MPI_Comm, int, void *, void *, void *, int *); typedef int (MPI_Delete_function)(MPI_Comm, int, void *, void *); typedef int (MPI_Datarep_extent_function)(MPI_Datatype, MPI_Aint *, void *); typedef int (MPI_Datarep_conversion_function)(void *, MPI_Datatype, int, void *, MPI_Offset, void *); typedef void (MPI_Comm_errhandler_function)(MPI_Comm *, int *, ...); typedef MPI_Comm_errhandler_function MPI_Comm_errhandler_fn ; typedef void (ompi_file_errhandler_fn)(MPI_File *, int *, ...); typedef ompi_file_errhandler_fn MPI_File_errhandler_fn ; typedef ompi_file_errhandler_fn MPI_File_errhandler_function; typedef void (MPI_Win_errhandler_function)(MPI_Win *, int *, ...); typedef MPI_Win_errhandler_function MPI_Win_errhandler_fn ; typedef void (MPI_Handler_function)(MPI_Comm *, int *, ...); typedef void (MPI_User_function)(void *, void *, int *, MPI_Datatype *); typedef int (MPI_Comm_copy_attr_function)(MPI_Comm, int, void *, void *, void *, int *); typedef int (MPI_Comm_delete_attr_function)(MPI_Comm, int, void *, void *); typedef int (MPI_Type_copy_attr_function)(MPI_Datatype, int, void *, void *, void *, int *); typedef int (MPI_Type_delete_attr_function)(MPI_Datatype, int, void *, void *); typedef int (MPI_Win_copy_attr_function)(MPI_Win, int, void *, void *, void *, int *); typedef int (MPI_Win_delete_attr_function)(MPI_Win, int, void *, void *); typedef int (MPI_Grequest_query_function)(void *, MPI_Status *); typedef int (MPI_Grequest_free_function)(void *); typedef int (MPI_Grequest_cancel_function)(void *, int); #line 432 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 453 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 469 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" enum { MPI_TAG_UB, MPI_HOST, MPI_IO, MPI_WTIME_IS_GLOBAL, MPI_APPNUM, MPI_LASTUSEDCODE, MPI_UNIVERSE_SIZE, MPI_WIN_BASE, MPI_WIN_SIZE, MPI_WIN_DISP_UNIT, IMPI_CLIENT_SIZE, IMPI_CLIENT_COLOR, IMPI_HOST_SIZE, IMPI_HOST_COLOR }; #line 582 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" enum { MPI_IDENT, MPI_CONGRUENT, MPI_SIMILAR, MPI_UNEQUAL }; enum { MPI_THREAD_SINGLE, MPI_THREAD_FUNNELED, MPI_THREAD_SERIALIZED, MPI_THREAD_MULTIPLE }; enum { MPI_COMBINER_NAMED, MPI_COMBINER_DUP, MPI_COMBINER_CONTIGUOUS, MPI_COMBINER_VECTOR, MPI_COMBINER_HVECTOR_INTEGER, MPI_COMBINER_HVECTOR, MPI_COMBINER_INDEXED, MPI_COMBINER_HINDEXED_INTEGER, MPI_COMBINER_HINDEXED, MPI_COMBINER_INDEXED_BLOCK, MPI_COMBINER_STRUCT_INTEGER, MPI_COMBINER_STRUCT, MPI_COMBINER_SUBARRAY, MPI_COMBINER_DARRAY, MPI_COMBINER_F90_REAL, MPI_COMBINER_F90_COMPLEX, MPI_COMBINER_F90_INTEGER, MPI_COMBINER_RESIZED, MPI_COMBINER_HINDEXED_BLOCK }; #line 649 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" int OMPI_C_MPI_TYPE_NULL_DELETE_FN( MPI_Datatype datatype, int type_keyval, void* attribute_val_out, void* extra_state ); int OMPI_C_MPI_TYPE_NULL_COPY_FN( MPI_Datatype datatype, int type_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); int OMPI_C_MPI_TYPE_DUP_FN( MPI_Datatype datatype, int type_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); int OMPI_C_MPI_COMM_NULL_DELETE_FN( MPI_Comm comm, int comm_keyval, void* attribute_val_out, void* extra_state ); int OMPI_C_MPI_COMM_NULL_COPY_FN( MPI_Comm comm, int comm_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); int OMPI_C_MPI_COMM_DUP_FN( MPI_Comm comm, int comm_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); int OMPI_C_MPI_NULL_DELETE_FN( MPI_Comm comm, int comm_keyval, void* attribute_val_out, void* extra_state ) ; int OMPI_C_MPI_NULL_COPY_FN( MPI_Comm comm, int comm_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ) ; int OMPI_C_MPI_DUP_FN( MPI_Comm comm, int comm_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ) ; int OMPI_C_MPI_WIN_NULL_DELETE_FN( MPI_Win window, int win_keyval, void* attribute_val_out, void* extra_state ); int OMPI_C_MPI_WIN_NULL_COPY_FN( MPI_Win window, int win_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); int OMPI_C_MPI_WIN_DUP_FN( MPI_Win window, int win_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); extern struct ompi_predefined_communicator_t ompi_mpi_comm_world; extern struct ompi_predefined_communicator_t ompi_mpi_comm_self; extern struct ompi_predefined_communicator_t ompi_mpi_comm_null; extern struct ompi_predefined_group_t ompi_mpi_group_empty; extern struct ompi_predefined_group_t ompi_mpi_group_null; extern struct ompi_predefined_request_t ompi_request_null; extern struct ompi_predefined_message_t ompi_message_null; extern struct ompi_predefined_message_t ompi_message_no_proc; extern struct ompi_predefined_op_t ompi_mpi_op_null; extern struct ompi_predefined_op_t ompi_mpi_op_min; extern struct ompi_predefined_op_t ompi_mpi_op_max; extern struct ompi_predefined_op_t ompi_mpi_op_sum; extern struct ompi_predefined_op_t ompi_mpi_op_prod; extern struct ompi_predefined_op_t ompi_mpi_op_land; extern struct ompi_predefined_op_t ompi_mpi_op_band; extern struct ompi_predefined_op_t ompi_mpi_op_lor; extern struct ompi_predefined_op_t ompi_mpi_op_bor; extern struct ompi_predefined_op_t ompi_mpi_op_lxor; extern struct ompi_predefined_op_t ompi_mpi_op_bxor; extern struct ompi_predefined_op_t ompi_mpi_op_maxloc; extern struct ompi_predefined_op_t ompi_mpi_op_minloc; extern struct ompi_predefined_op_t ompi_mpi_op_replace; extern struct ompi_predefined_datatype_t ompi_mpi_datatype_null; extern struct ompi_predefined_datatype_t ompi_mpi_lb ; extern struct ompi_predefined_datatype_t ompi_mpi_ub ; extern struct ompi_predefined_datatype_t ompi_mpi_char; extern struct ompi_predefined_datatype_t ompi_mpi_signed_char; extern struct ompi_predefined_datatype_t ompi_mpi_unsigned_char; extern struct ompi_predefined_datatype_t ompi_mpi_byte; extern struct ompi_predefined_datatype_t ompi_mpi_short; extern struct ompi_predefined_datatype_t ompi_mpi_unsigned_short; extern struct ompi_predefined_datatype_t ompi_mpi_int; extern struct ompi_predefined_datatype_t ompi_mpi_unsigned; extern struct ompi_predefined_datatype_t ompi_mpi_long; extern struct ompi_predefined_datatype_t ompi_mpi_unsigned_long; extern struct ompi_predefined_datatype_t ompi_mpi_long_long_int; extern struct ompi_predefined_datatype_t ompi_mpi_unsigned_long_long; extern struct ompi_predefined_datatype_t ompi_mpi_float; extern struct ompi_predefined_datatype_t ompi_mpi_double; extern struct ompi_predefined_datatype_t ompi_mpi_long_double; extern struct ompi_predefined_datatype_t ompi_mpi_wchar; extern struct ompi_predefined_datatype_t ompi_mpi_packed; extern struct ompi_predefined_datatype_t ompi_mpi_cxx_bool; extern struct ompi_predefined_datatype_t ompi_mpi_cxx_cplex; extern struct ompi_predefined_datatype_t ompi_mpi_cxx_dblcplex; extern struct ompi_predefined_datatype_t ompi_mpi_cxx_ldblcplex; extern struct ompi_predefined_datatype_t ompi_mpi_logic; extern struct ompi_predefined_datatype_t ompi_mpi_character; extern struct ompi_predefined_datatype_t ompi_mpi_integer; extern struct ompi_predefined_datatype_t ompi_mpi_real; extern struct ompi_predefined_datatype_t ompi_mpi_dblprec; extern struct ompi_predefined_datatype_t ompi_mpi_cplex; extern struct ompi_predefined_datatype_t ompi_mpi_dblcplex; extern struct ompi_predefined_datatype_t ompi_mpi_ldblcplex; extern struct ompi_predefined_datatype_t ompi_mpi_2int; extern struct ompi_predefined_datatype_t ompi_mpi_2integer; extern struct ompi_predefined_datatype_t ompi_mpi_2real; extern struct ompi_predefined_datatype_t ompi_mpi_2dblprec; extern struct ompi_predefined_datatype_t ompi_mpi_2cplex; extern struct ompi_predefined_datatype_t ompi_mpi_2dblcplex; extern struct ompi_predefined_datatype_t ompi_mpi_float_int; extern struct ompi_predefined_datatype_t ompi_mpi_double_int; extern struct ompi_predefined_datatype_t ompi_mpi_longdbl_int; extern struct ompi_predefined_datatype_t ompi_mpi_short_int; extern struct ompi_predefined_datatype_t ompi_mpi_long_int; extern struct ompi_predefined_datatype_t ompi_mpi_logical1; extern struct ompi_predefined_datatype_t ompi_mpi_logical2; extern struct ompi_predefined_datatype_t ompi_mpi_logical4; extern struct ompi_predefined_datatype_t ompi_mpi_logical8; extern struct ompi_predefined_datatype_t ompi_mpi_integer1; extern struct ompi_predefined_datatype_t ompi_mpi_integer2; extern struct ompi_predefined_datatype_t ompi_mpi_integer4; extern struct ompi_predefined_datatype_t ompi_mpi_integer8; extern struct ompi_predefined_datatype_t ompi_mpi_integer16; extern struct ompi_predefined_datatype_t ompi_mpi_real2; extern struct ompi_predefined_datatype_t ompi_mpi_real4; extern struct ompi_predefined_datatype_t ompi_mpi_real8; extern struct ompi_predefined_datatype_t ompi_mpi_real16; extern struct ompi_predefined_datatype_t ompi_mpi_complex8; extern struct ompi_predefined_datatype_t ompi_mpi_complex16; extern struct ompi_predefined_datatype_t ompi_mpi_complex32; extern struct ompi_predefined_datatype_t ompi_mpi_int8_t; extern struct ompi_predefined_datatype_t ompi_mpi_uint8_t; extern struct ompi_predefined_datatype_t ompi_mpi_int16_t; extern struct ompi_predefined_datatype_t ompi_mpi_uint16_t; extern struct ompi_predefined_datatype_t ompi_mpi_int32_t; extern struct ompi_predefined_datatype_t ompi_mpi_uint32_t; extern struct ompi_predefined_datatype_t ompi_mpi_int64_t; extern struct ompi_predefined_datatype_t ompi_mpi_uint64_t; extern struct ompi_predefined_datatype_t ompi_mpi_aint; extern struct ompi_predefined_datatype_t ompi_mpi_offset; extern struct ompi_predefined_datatype_t ompi_mpi_c_bool; extern struct ompi_predefined_datatype_t ompi_mpi_c_complex; extern struct ompi_predefined_datatype_t ompi_mpi_c_float_complex; extern struct ompi_predefined_datatype_t ompi_mpi_c_double_complex; extern struct ompi_predefined_datatype_t ompi_mpi_c_long_double_complex; extern struct ompi_predefined_errhandler_t ompi_mpi_errhandler_null; extern struct ompi_predefined_errhandler_t ompi_mpi_errors_are_fatal; extern struct ompi_predefined_errhandler_t ompi_mpi_errors_return; extern struct ompi_predefined_win_t ompi_mpi_win_null; extern struct ompi_predefined_file_t ompi_mpi_file_null; extern struct ompi_predefined_info_t ompi_mpi_info_null; extern int *MPI_F_STATUS_IGNORE; extern int *MPI_F_STATUSES_IGNORE; #line 921 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 954 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 1011 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 1038 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" int MPI_Abort(MPI_Comm comm, int errorcode); int MPI_Accumulate(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Op op, MPI_Win win); int MPI_Add_error_class(int *errorclass); int MPI_Add_error_code(int errorclass, int *errorcode); int MPI_Add_error_string(int errorcode, char *string); int MPI_Address(void *location, MPI_Aint *address) ; int MPI_Allgather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm); int MPI_Iallgather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int MPI_Allgatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, MPI_Comm comm); int MPI_Iallgatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int MPI_Alloc_mem(MPI_Aint size, MPI_Info info, void *baseptr); int MPI_Allreduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int MPI_Iallreduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int MPI_Alltoall(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm); int MPI_Ialltoall(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int MPI_Alltoallv(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype recvtype, MPI_Comm comm); int MPI_Ialltoallv(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int MPI_Alltoallw(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype *sendtypes, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype *recvtypes, MPI_Comm comm); int MPI_Ialltoallw(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype *sendtypes, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype *recvtypes, MPI_Comm comm, MPI_Request *request); int MPI_Attr_delete(MPI_Comm comm, int keyval) ; int MPI_Attr_get(MPI_Comm comm, int keyval, void *attribute_val, int *flag) ; int MPI_Attr_put(MPI_Comm comm, int keyval, void *attribute_val) ; int MPI_Barrier(MPI_Comm comm); int MPI_Ibarrier(MPI_Comm comm, MPI_Request *request); int MPI_Bcast(void *buffer, int count, MPI_Datatype datatype, int root, MPI_Comm comm); int MPI_Bsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int MPI_Ibcast(void *buffer, int count, MPI_Datatype datatype, int root, MPI_Comm comm, MPI_Request *request); int MPI_Bsend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Buffer_attach(void *buffer, int size); int MPI_Buffer_detach(void *buffer, int *size); int MPI_Cancel(MPI_Request *request); int MPI_Cart_coords(MPI_Comm comm, int rank, int maxdims, int *coords); int MPI_Cart_create(MPI_Comm old_comm, int ndims, int *dims, int *periods, int reorder, MPI_Comm *comm_cart); int MPI_Cart_get(MPI_Comm comm, int maxdims, int *dims, int *periods, int *coords); int MPI_Cart_map(MPI_Comm comm, int ndims, int *dims, int *periods, int *newrank); int MPI_Cart_rank(MPI_Comm comm, int *coords, int *rank); int MPI_Cart_shift(MPI_Comm comm, int direction, int disp, int *rank_source, int *rank_dest); int MPI_Cart_sub(MPI_Comm comm, int *remain_dims, MPI_Comm *new_comm); int MPI_Cartdim_get(MPI_Comm comm, int *ndims); int MPI_Close_port(char *port_name); int MPI_Comm_accept(char *port_name, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *newcomm); int MPI_Comm_c2f(MPI_Comm comm); int MPI_Comm_call_errhandler(MPI_Comm comm, int errorcode); int MPI_Comm_compare(MPI_Comm comm1, MPI_Comm comm2, int *result); int MPI_Comm_connect(char *port_name, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *newcomm); int MPI_Comm_create_errhandler(MPI_Comm_errhandler_function *function, MPI_Errhandler *errhandler); int MPI_Comm_create_keyval(MPI_Comm_copy_attr_function *comm_copy_attr_fn, MPI_Comm_delete_attr_function *comm_delete_attr_fn, int *comm_keyval, void *extra_state); int MPI_Comm_create(MPI_Comm comm, MPI_Group group, MPI_Comm *newcomm); int MPI_Comm_delete_attr(MPI_Comm comm, int comm_keyval); int MPI_Comm_disconnect(MPI_Comm *comm); int MPI_Comm_dup(MPI_Comm comm, MPI_Comm *newcomm); MPI_Comm MPI_Comm_f2c(int comm); int MPI_Comm_free_keyval(int *comm_keyval); int MPI_Comm_free(MPI_Comm *comm); int MPI_Comm_get_attr(MPI_Comm comm, int comm_keyval, void *attribute_val, int *flag); int MPI_Dist_graph_create(MPI_Comm comm_old, int n, int nodes[], int degrees[], int targets[], int weights[], MPI_Info info, int reorder, MPI_Comm * newcomm); int MPI_Dist_graph_create_adjacent(MPI_Comm comm_old, int indegree, int sources[], int sourceweights[], int outdegree, int destinations[], int destweights[], MPI_Info info, int reorder, MPI_Comm *comm_dist_graph); int MPI_Dist_graph_neighbors(MPI_Comm comm, int maxindegree, int sources[], int sourceweights[], int maxoutdegree, int destinations[], int destweights[]); int MPI_Dist_graph_neighbors_count(MPI_Comm comm, int *inneighbors, int *outneighbors, int *weighted); int MPI_Comm_get_errhandler(MPI_Comm comm, MPI_Errhandler *erhandler); int MPI_Comm_get_name(MPI_Comm comm, char *comm_name, int *resultlen); int MPI_Comm_get_parent(MPI_Comm *parent); int MPI_Comm_group(MPI_Comm comm, MPI_Group *group); int MPI_Comm_join(int fd, MPI_Comm *intercomm); int MPI_Comm_rank(MPI_Comm comm, int *rank); int MPI_Comm_remote_group(MPI_Comm comm, MPI_Group *group); int MPI_Comm_remote_size(MPI_Comm comm, int *size); int MPI_Comm_set_attr(MPI_Comm comm, int comm_keyval, void *attribute_val); int MPI_Comm_set_errhandler(MPI_Comm comm, MPI_Errhandler errhandler); int MPI_Comm_set_name(MPI_Comm comm, char *comm_name); int MPI_Comm_size(MPI_Comm comm, int *size); int MPI_Comm_spawn(char *command, char **argv, int maxprocs, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *intercomm, int *array_of_errcodes); int MPI_Comm_spawn_multiple(int count, char **array_of_commands, char ***array_of_argv, int *array_of_maxprocs, MPI_Info *array_of_info, int root, MPI_Comm comm, MPI_Comm *intercomm, int *array_of_errcodes); int MPI_Comm_split(MPI_Comm comm, int color, int key, MPI_Comm *newcomm); int MPI_Comm_test_inter(MPI_Comm comm, int *flag); int MPI_Dims_create(int nnodes, int ndims, int *dims); int MPI_Errhandler_c2f(MPI_Errhandler errhandler); int MPI_Errhandler_create(MPI_Handler_function *function, MPI_Errhandler *errhandler) ; MPI_Errhandler MPI_Errhandler_f2c(int errhandler); int MPI_Errhandler_free(MPI_Errhandler *errhandler); int MPI_Errhandler_get(MPI_Comm comm, MPI_Errhandler *errhandler) ; int MPI_Errhandler_set(MPI_Comm comm, MPI_Errhandler errhandler) ; int MPI_Error_class(int errorcode, int *errorclass); int MPI_Error_string(int errorcode, char *string, int *resultlen); int MPI_Exscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int MPI_Iexscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int MPI_File_c2f(MPI_File file); MPI_File MPI_File_f2c(int file); int MPI_File_call_errhandler(MPI_File fh, int errorcode); int MPI_File_create_errhandler(MPI_File_errhandler_function *function, MPI_Errhandler *errhandler); int MPI_File_set_errhandler( MPI_File file, MPI_Errhandler errhandler); int MPI_File_get_errhandler( MPI_File file, MPI_Errhandler *errhandler); int MPI_File_open(MPI_Comm comm, char *filename, int amode, MPI_Info info, MPI_File *fh); int MPI_File_close(MPI_File *fh); int MPI_File_delete(char *filename, MPI_Info info); int MPI_File_set_size(MPI_File fh, MPI_Offset size); int MPI_File_preallocate(MPI_File fh, MPI_Offset size); int MPI_File_get_size(MPI_File fh, MPI_Offset *size); int MPI_File_get_group(MPI_File fh, MPI_Group *group); int MPI_File_get_amode(MPI_File fh, int *amode); int MPI_File_set_info(MPI_File fh, MPI_Info info); int MPI_File_get_info(MPI_File fh, MPI_Info *info_used); int MPI_File_set_view(MPI_File fh, MPI_Offset disp, MPI_Datatype etype, MPI_Datatype filetype, char *datarep, MPI_Info info); int MPI_File_get_view(MPI_File fh, MPI_Offset *disp, MPI_Datatype *etype, MPI_Datatype *filetype, char *datarep); int MPI_File_read_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_read_at_all(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write_at_all(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_iread_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_iwrite_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_read(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_read_all(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write_all(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_iread(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_iwrite(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_seek(MPI_File fh, MPI_Offset offset, int whence); int MPI_File_get_position(MPI_File fh, MPI_Offset *offset); int MPI_File_get_byte_offset(MPI_File fh, MPI_Offset offset, MPI_Offset *disp); int MPI_File_read_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_iread_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_iwrite_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_read_ordered(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write_ordered(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_seek_shared(MPI_File fh, MPI_Offset offset, int whence); int MPI_File_get_position_shared(MPI_File fh, MPI_Offset *offset); int MPI_File_read_at_all_begin(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype); int MPI_File_read_at_all_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_write_at_all_begin(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype); int MPI_File_write_at_all_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_read_all_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int MPI_File_read_all_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_write_all_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int MPI_File_write_all_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_read_ordered_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int MPI_File_read_ordered_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_write_ordered_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int MPI_File_write_ordered_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_get_type_extent(MPI_File fh, MPI_Datatype datatype, MPI_Aint *extent); int MPI_File_set_atomicity(MPI_File fh, int flag); int MPI_File_get_atomicity(MPI_File fh, int *flag); int MPI_File_sync(MPI_File fh); int MPI_Finalize(void); int MPI_Finalized(int *flag); int MPI_Free_mem(void *base); int MPI_Gather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int MPI_Igather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int MPI_Gatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, int root, MPI_Comm comm); int MPI_Igatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int MPI_Get_address(void *location, MPI_Aint *address); int MPI_Get_count(MPI_Status *status, MPI_Datatype datatype, int *count); int MPI_Get_elements(MPI_Status *status, MPI_Datatype datatype, int *count); int MPI_Get(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Win win); int MPI_Get_processor_name(char *name, int *resultlen); int MPI_Get_version(int *version, int *subversion); int MPI_Graph_create(MPI_Comm comm_old, int nnodes, int *index, int *edges, int reorder, MPI_Comm *comm_graph); int MPI_Graph_get(MPI_Comm comm, int maxindex, int maxedges, int *index, int *edges); int MPI_Graph_map(MPI_Comm comm, int nnodes, int *index, int *edges, int *newrank); int MPI_Graph_neighbors_count(MPI_Comm comm, int rank, int *nneighbors); int MPI_Graph_neighbors(MPI_Comm comm, int rank, int maxneighbors, int *neighbors); int MPI_Graphdims_get(MPI_Comm comm, int *nnodes, int *nedges); int MPI_Grequest_complete(MPI_Request request); int MPI_Grequest_start(MPI_Grequest_query_function *query_fn, MPI_Grequest_free_function *free_fn, MPI_Grequest_cancel_function *cancel_fn, void *extra_state, MPI_Request *request); int MPI_Group_c2f(MPI_Group group); int MPI_Group_compare(MPI_Group group1, MPI_Group group2, int *result); int MPI_Group_difference(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int MPI_Group_excl(MPI_Group group, int n, int *ranks, MPI_Group *newgroup); MPI_Group MPI_Group_f2c(int group); int MPI_Group_free(MPI_Group *group); int MPI_Group_incl(MPI_Group group, int n, int *ranks, MPI_Group *newgroup); int MPI_Group_intersection(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int MPI_Group_range_excl(MPI_Group group, int n, int ranges[][3], MPI_Group *newgroup); int MPI_Group_range_incl(MPI_Group group, int n, int ranges[][3], MPI_Group *newgroup); int MPI_Group_rank(MPI_Group group, int *rank); int MPI_Group_size(MPI_Group group, int *size); int MPI_Group_translate_ranks(MPI_Group group1, int n, int *ranks1, MPI_Group group2, int *ranks2); int MPI_Group_union(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int MPI_Ibsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Improbe(int source, int tag, MPI_Comm comm, int *flag, MPI_Message *message, MPI_Status *status); int MPI_Imrecv(void *buf, int count, MPI_Datatype type, MPI_Message *message, MPI_Request *request); int MPI_Info_c2f(MPI_Info info); int MPI_Info_create(MPI_Info *info); int MPI_Info_delete(MPI_Info info, char *key); int MPI_Info_dup(MPI_Info info, MPI_Info *newinfo); MPI_Info MPI_Info_f2c(int info); int MPI_Info_free(MPI_Info *info); int MPI_Info_get(MPI_Info info, char *key, int valuelen, char *value, int *flag); int MPI_Info_get_nkeys(MPI_Info info, int *nkeys); int MPI_Info_get_nthkey(MPI_Info info, int n, char *key); int MPI_Info_get_valuelen(MPI_Info info, char *key, int *valuelen, int *flag); int MPI_Info_set(MPI_Info info, char *key, char *value); int MPI_Init(int *argc, char ***argv); int MPI_Initialized(int *flag); int MPI_Init_thread(int *argc, char ***argv, int required, int *provided); int MPI_Intercomm_create(MPI_Comm local_comm, int local_leader, MPI_Comm bridge_comm, int remote_leader, int tag, MPI_Comm *newintercomm); int MPI_Intercomm_merge(MPI_Comm intercomm, int high, MPI_Comm *newintercomm); int MPI_Iprobe(int source, int tag, MPI_Comm comm, int *flag, MPI_Status *status); int MPI_Irecv(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Irsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Isend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Issend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Is_thread_main(int *flag); int MPI_Keyval_create(MPI_Copy_function *copy_fn, MPI_Delete_function *delete_fn, int *keyval, void *extra_state) ; int MPI_Keyval_free(int *keyval) ; int MPI_Lookup_name(char *service_name, MPI_Info info, char *port_name); int MPI_Message_c2f(MPI_Message message); MPI_Message MPI_Message_f2c(int message); int MPI_Mprobe(int source, int tag, MPI_Comm comm, MPI_Message *message, MPI_Status *status); int MPI_Mrecv(void *buf, int count, MPI_Datatype type, MPI_Message *message, MPI_Status *status); int MPI_Op_c2f(MPI_Op op); int MPI_Op_commutative(MPI_Op op, int *commute); int MPI_Op_create(MPI_User_function *function, int commute, MPI_Op *op); int MPI_Open_port(MPI_Info info, char *port_name); MPI_Op MPI_Op_f2c(int op); int MPI_Op_free(MPI_Op *op); int MPI_Pack_external(char *datarep, void *inbuf, int incount, MPI_Datatype datatype, void *outbuf, MPI_Aint outsize, MPI_Aint *position); int MPI_Pack_external_size(char *datarep, int incount, MPI_Datatype datatype, MPI_Aint *size); int MPI_Pack(void *inbuf, int incount, MPI_Datatype datatype, void *outbuf, int outsize, int *position, MPI_Comm comm); int MPI_Pack_size(int incount, MPI_Datatype datatype, MPI_Comm comm, int *size); int MPI_Pcontrol(const int level, ...); int MPI_Probe(int source, int tag, MPI_Comm comm, MPI_Status *status); int MPI_Publish_name(char *service_name, MPI_Info info, char *port_name); int MPI_Put(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Win win); int MPI_Query_thread(int *provided); int MPI_Recv_init(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Recv(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Status *status); int MPI_Reduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, int root, MPI_Comm comm); int MPI_Ireduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, int root, MPI_Comm comm, MPI_Request *request); int MPI_Reduce_local(void *inbuf, void *inoutbuf, int count, MPI_Datatype datatype, MPI_Op op); int MPI_Reduce_scatter(void *sendbuf, void *recvbuf, int *recvcounts, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int MPI_Ireduce_scatter(void *sendbuf, void *recvbuf, int *recvcounts, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int MPI_Reduce_scatter_block(void *sendbuf, void *recvbuf, int recvcount, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int MPI_Ireduce_scatter_block(void *sendbuf, void *recvbuf, int recvcount, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int MPI_Register_datarep(char *datarep, MPI_Datarep_conversion_function *read_conversion_fn, MPI_Datarep_conversion_function *write_conversion_fn, MPI_Datarep_extent_function *dtype_file_extent_fn, void *extra_state); int MPI_Request_c2f(MPI_Request request); MPI_Request MPI_Request_f2c(int request); int MPI_Request_free(MPI_Request *request); int MPI_Request_get_status(MPI_Request request, int *flag, MPI_Status *status); int MPI_Rsend(void *ibuf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int MPI_Rsend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Scan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int MPI_Iscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int MPI_Scatter(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int MPI_Iscatter(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int MPI_Scatterv(void *sendbuf, int *sendcounts, int *displs, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int MPI_Iscatterv(void *sendbuf, int *sendcounts, int *displs, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int MPI_Send_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Send(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int MPI_Sendrecv(void *sendbuf, int sendcount, MPI_Datatype sendtype, int dest, int sendtag, void *recvbuf, int recvcount, MPI_Datatype recvtype, int source, int recvtag, MPI_Comm comm, MPI_Status *status); int MPI_Sendrecv_replace(void * buf, int count, MPI_Datatype datatype, int dest, int sendtag, int source, int recvtag, MPI_Comm comm, MPI_Status *status); int MPI_Ssend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Ssend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int MPI_Start(MPI_Request *request); int MPI_Startall(int count, MPI_Request *array_of_requests); int MPI_Status_c2f(MPI_Status *c_status, int *f_status); int MPI_Status_f2c(int *f_status, MPI_Status *c_status); int MPI_Status_set_cancelled(MPI_Status *status, int flag); int MPI_Status_set_elements(MPI_Status *status, MPI_Datatype datatype, int count); int MPI_Testall(int count, MPI_Request array_of_requests[], int *flag, MPI_Status array_of_statuses[]); int MPI_Testany(int count, MPI_Request array_of_requests[], int *index, int *flag, MPI_Status *status); int MPI_Test(MPI_Request *request, int *flag, MPI_Status *status); int MPI_Test_cancelled(MPI_Status *status, int *flag); int MPI_Testsome(int incount, MPI_Request array_of_requests[], int *outcount, int array_of_indices[], MPI_Status array_of_statuses[]); int MPI_Topo_test(MPI_Comm comm, int *status); int MPI_Type_c2f(MPI_Datatype datatype); int MPI_Type_commit(MPI_Datatype *type); int MPI_Type_contiguous(int count, MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_darray(int size, int rank, int ndims, int gsize_array[], int distrib_array[], int darg_array[], int psize_array[], int order, MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_f90_complex(int p, int r, MPI_Datatype *newtype); int MPI_Type_create_f90_integer(int r, MPI_Datatype *newtype); int MPI_Type_create_f90_real(int p, int r, MPI_Datatype *newtype); int MPI_Type_create_hindexed(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_hvector(int count, int blocklength, MPI_Aint stride, MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_keyval(MPI_Type_copy_attr_function *type_copy_attr_fn, MPI_Type_delete_attr_function *type_delete_attr_fn, int *type_keyval, void *extra_state); int MPI_Type_create_indexed_block(int count, int blocklength, int array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_struct(int count, int array_of_block_lengths[], MPI_Aint array_of_displacements[], MPI_Datatype array_of_types[], MPI_Datatype *newtype); int MPI_Type_create_subarray(int ndims, int size_array[], int subsize_array[], int start_array[], int order, MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_resized(MPI_Datatype oldtype, MPI_Aint lb, MPI_Aint extent, MPI_Datatype *newtype); int MPI_Type_delete_attr(MPI_Datatype type, int type_keyval); int MPI_Type_dup(MPI_Datatype type, MPI_Datatype *newtype); int MPI_Type_extent(MPI_Datatype type, MPI_Aint *extent) ; int MPI_Type_free(MPI_Datatype *type); int MPI_Type_free_keyval(int *type_keyval); MPI_Datatype MPI_Type_f2c(int datatype); int MPI_Type_get_attr(MPI_Datatype type, int type_keyval, void *attribute_val, int *flag); int MPI_Type_get_contents(MPI_Datatype mtype, int max_integers, int max_addresses, int max_datatypes, int array_of_integers[], MPI_Aint array_of_addresses[], MPI_Datatype array_of_datatypes[]); int MPI_Type_get_envelope(MPI_Datatype type, int *num_integers, int *num_addresses, int *num_datatypes, int *combiner); int MPI_Type_get_extent(MPI_Datatype type, MPI_Aint *lb, MPI_Aint *extent); int MPI_Type_get_name(MPI_Datatype type, char *type_name, int *resultlen); int MPI_Type_get_true_extent(MPI_Datatype datatype, MPI_Aint *true_lb, MPI_Aint *true_extent); int MPI_Type_hindexed(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype) ; int MPI_Type_hvector(int count, int blocklength, MPI_Aint stride, MPI_Datatype oldtype, MPI_Datatype *newtype) ; int MPI_Type_indexed(int count, int array_of_blocklengths[], int array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_lb(MPI_Datatype type, MPI_Aint *lb) ; int MPI_Type_match_size(int typeclass, int size, MPI_Datatype *type); int MPI_Type_set_attr(MPI_Datatype type, int type_keyval, void *attr_val); int MPI_Type_set_name(MPI_Datatype type, char *type_name); int MPI_Type_size(MPI_Datatype type, int *size); int MPI_Type_struct(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype array_of_types[], MPI_Datatype *newtype) ; int MPI_Type_ub(MPI_Datatype mtype, MPI_Aint *ub) ; int MPI_Type_vector(int count, int blocklength, int stride, MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Unpack(void *inbuf, int insize, int *position, void *outbuf, int outcount, MPI_Datatype datatype, MPI_Comm comm); int MPI_Unpublish_name(char *service_name, MPI_Info info, char *port_name); int MPI_Unpack_external (char *datarep, void *inbuf, MPI_Aint insize, MPI_Aint *position, void *outbuf, int outcount, MPI_Datatype datatype); int MPI_Waitall(int count, MPI_Request *array_of_requests, MPI_Status *array_of_statuses); int MPI_Waitany(int count, MPI_Request *array_of_requests, int *index, MPI_Status *status); int MPI_Wait(MPI_Request *request, MPI_Status *status); int MPI_Waitsome(int incount, MPI_Request *array_of_requests, int *outcount, int *array_of_indices, MPI_Status *array_of_statuses); int MPI_Win_c2f(MPI_Win win); int MPI_Win_call_errhandler(MPI_Win win, int errorcode); int MPI_Win_complete(MPI_Win win); int MPI_Win_create(void *base, MPI_Aint size, int disp_unit, MPI_Info info, MPI_Comm comm, MPI_Win *win); int MPI_Win_create_errhandler(MPI_Win_errhandler_function *function, MPI_Errhandler *errhandler); int MPI_Win_create_keyval(MPI_Win_copy_attr_function *win_copy_attr_fn, MPI_Win_delete_attr_function *win_delete_attr_fn, int *win_keyval, void *extra_state); int MPI_Win_delete_attr(MPI_Win win, int win_keyval); MPI_Win MPI_Win_f2c(int win); int MPI_Win_fence(int assert, MPI_Win win); int MPI_Win_free(MPI_Win *win); int MPI_Win_free_keyval(int *win_keyval); int MPI_Win_get_attr(MPI_Win win, int win_keyval, void *attribute_val, int *flag); int MPI_Win_get_errhandler(MPI_Win win, MPI_Errhandler *errhandler); int MPI_Win_get_group(MPI_Win win, MPI_Group *group); int MPI_Win_get_name(MPI_Win win, char *win_name, int *resultlen); int MPI_Win_lock(int lock_type, int rank, int assert, MPI_Win win); int MPI_Win_post(MPI_Group group, int assert, MPI_Win win); int MPI_Win_set_attr(MPI_Win win, int win_keyval, void *attribute_val); int MPI_Win_set_errhandler(MPI_Win win, MPI_Errhandler errhandler); int MPI_Win_set_name(MPI_Win win, char *win_name); int MPI_Win_start(MPI_Group group, int assert, MPI_Win win); int MPI_Win_test(MPI_Win win, int *flag); int MPI_Win_unlock(int rank, MPI_Win win); int MPI_Win_wait(MPI_Win win); double MPI_Wtick(void); double MPI_Wtime(void); int PMPI_Abort(MPI_Comm comm, int errorcode); int PMPI_Accumulate(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Op op, MPI_Win win); int PMPI_Add_error_class(int *errorclass); int PMPI_Add_error_code(int errorclass, int *errorcode); int PMPI_Add_error_string(int errorcode, char *string); int PMPI_Address(void *location, MPI_Aint *address) ; int PMPI_Allgather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm); int PMPI_Iallgather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int PMPI_Allgatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, MPI_Comm comm); int PMPI_Iallgatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int PMPI_Alloc_mem(MPI_Aint size, MPI_Info info, void *baseptr); int PMPI_Allreduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int PMPI_Iallreduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int PMPI_Alltoall(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm); int PMPI_Ialltoall(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int PMPI_Alltoallv(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype recvtype, MPI_Comm comm); int PMPI_Ialltoallv(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int PMPI_Alltoallw(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype *sendtypes, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype *recvtypes, MPI_Comm comm); int PMPI_Ialltoallw(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype *sendtypes, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype *recvtypes, MPI_Comm comm, MPI_Request *request); int PMPI_Attr_delete(MPI_Comm comm, int keyval) ; int PMPI_Attr_get(MPI_Comm comm, int keyval, void *attribute_val, int *flag) ; int PMPI_Dist_graph_create(MPI_Comm comm_old, int n, int nodes[], int degrees[], int targets[], int weights[], MPI_Info info, int reorder, MPI_Comm * newcomm); int PMPI_Dist_graph_create_adjacent(MPI_Comm comm_old, int indegree, int sources[], int sourceweights[], int outdegree, int destinations[], int destweights[], MPI_Info info, int reorder, MPI_Comm *comm_dist_graph); int PMPI_Dist_graph_neighbors(MPI_Comm comm, int maxindegree, int sources[], int sourceweights[], int maxoutdegree, int destinations[], int destweights[]); int PMPI_Dist_graph_neighbors_count(MPI_Comm comm, int *inneighbors, int *outneighbors, int *weighted); int PMPI_Attr_put(MPI_Comm comm, int keyval, void *attribute_val) ; int PMPI_Barrier(MPI_Comm comm); int PMPI_Ibarrier(MPI_Comm comm, MPI_Request *request); int PMPI_Bcast(void *buffer, int count, MPI_Datatype datatype, int root, MPI_Comm comm); int PMPI_Ibcast(void *buffer, int count, MPI_Datatype datatype, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Bsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int PMPI_Bsend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Buffer_attach(void *buffer, int size); int PMPI_Buffer_detach(void *buffer, int *size); int PMPI_Cancel(MPI_Request *request); int PMPI_Cart_coords(MPI_Comm comm, int rank, int maxdims, int *coords); int PMPI_Cart_create(MPI_Comm old_comm, int ndims, int *dims, int *periods, int reorder, MPI_Comm *comm_cart); int PMPI_Cart_get(MPI_Comm comm, int maxdims, int *dims, int *periods, int *coords); int PMPI_Cart_map(MPI_Comm comm, int ndims, int *dims, int *periods, int *newrank); int PMPI_Cart_rank(MPI_Comm comm, int *coords, int *rank); int PMPI_Cart_shift(MPI_Comm comm, int direction, int disp, int *rank_source, int *rank_dest); int PMPI_Cart_sub(MPI_Comm comm, int *remain_dims, MPI_Comm *new_comm); int PMPI_Cartdim_get(MPI_Comm comm, int *ndims); int PMPI_Close_port(char *port_name); int PMPI_Comm_accept(char *port_name, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *newcomm); int PMPI_Comm_c2f(MPI_Comm comm); int PMPI_Comm_call_errhandler(MPI_Comm comm, int errorcode); int PMPI_Comm_compare(MPI_Comm comm1, MPI_Comm comm2, int *result); int PMPI_Comm_connect(char *port_name, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *newcomm); int PMPI_Comm_create_errhandler(MPI_Comm_errhandler_function *function, MPI_Errhandler *errhandler); int PMPI_Comm_create_keyval(MPI_Comm_copy_attr_function *comm_copy_attr_fn, MPI_Comm_delete_attr_function *comm_delete_attr_fn, int *comm_keyval, void *extra_state); int PMPI_Comm_create(MPI_Comm comm, MPI_Group group, MPI_Comm *newcomm); int PMPI_Comm_delete_attr(MPI_Comm comm, int comm_keyval); int PMPI_Comm_disconnect(MPI_Comm *comm); int PMPI_Comm_dup(MPI_Comm comm, MPI_Comm *newcomm); MPI_Comm PMPI_Comm_f2c(int comm); int PMPI_Comm_free_keyval(int *comm_keyval); int PMPI_Comm_free(MPI_Comm *comm); int PMPI_Comm_get_attr(MPI_Comm comm, int comm_keyval, void *attribute_val, int *flag); int PMPI_Comm_get_errhandler(MPI_Comm comm, MPI_Errhandler *erhandler); int PMPI_Comm_get_name(MPI_Comm comm, char *comm_name, int *resultlen); int PMPI_Comm_get_parent(MPI_Comm *parent); int PMPI_Comm_group(MPI_Comm comm, MPI_Group *group); int PMPI_Comm_join(int fd, MPI_Comm *intercomm); int PMPI_Comm_rank(MPI_Comm comm, int *rank); int PMPI_Comm_remote_group(MPI_Comm comm, MPI_Group *group); int PMPI_Comm_remote_size(MPI_Comm comm, int *size); int PMPI_Comm_set_attr(MPI_Comm comm, int comm_keyval, void *attribute_val); int PMPI_Comm_set_errhandler(MPI_Comm comm, MPI_Errhandler errhandler); int PMPI_Comm_set_name(MPI_Comm comm, char *comm_name); int PMPI_Comm_size(MPI_Comm comm, int *size); int PMPI_Comm_spawn(char *command, char **argv, int maxprocs, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *intercomm, int *array_of_errcodes); int PMPI_Comm_spawn_multiple(int count, char **array_of_commands, char ***array_of_argv, int *array_of_maxprocs, MPI_Info *array_of_info, int root, MPI_Comm comm, MPI_Comm *intercomm, int *array_of_errcodes); int PMPI_Comm_split(MPI_Comm comm, int color, int key, MPI_Comm *newcomm); int PMPI_Comm_test_inter(MPI_Comm comm, int *flag); int PMPI_Dims_create(int nnodes, int ndims, int *dims); int PMPI_Errhandler_c2f(MPI_Errhandler errhandler); int PMPI_Errhandler_create(MPI_Handler_function *function, MPI_Errhandler *errhandler) ; MPI_Errhandler PMPI_Errhandler_f2c(int errhandler); int PMPI_Errhandler_free(MPI_Errhandler *errhandler); int PMPI_Errhandler_get(MPI_Comm comm, MPI_Errhandler *errhandler) ; int PMPI_Errhandler_set(MPI_Comm comm, MPI_Errhandler errhandler) ; int PMPI_Error_class(int errorcode, int *errorclass); int PMPI_Error_string(int errorcode, char *string, int *resultlen); int PMPI_Exscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int PMPI_Iexscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int PMPI_File_c2f(MPI_File file); MPI_File PMPI_File_f2c(int file); int PMPI_File_call_errhandler(MPI_File fh, int errorcode); int PMPI_File_create_errhandler(MPI_File_errhandler_function *function, MPI_Errhandler *errhandler); int PMPI_File_set_errhandler( MPI_File file, MPI_Errhandler errhandler); int PMPI_File_get_errhandler( MPI_File file, MPI_Errhandler *errhandler); int PMPI_File_open(MPI_Comm comm, char *filename, int amode, MPI_Info info, MPI_File *fh); int PMPI_File_close(MPI_File *fh); int PMPI_File_delete(char *filename, MPI_Info info); int PMPI_File_set_size(MPI_File fh, MPI_Offset size); int PMPI_File_preallocate(MPI_File fh, MPI_Offset size); int PMPI_File_get_size(MPI_File fh, MPI_Offset *size); int PMPI_File_get_group(MPI_File fh, MPI_Group *group); int PMPI_File_get_amode(MPI_File fh, int *amode); int PMPI_File_set_info(MPI_File fh, MPI_Info info); int PMPI_File_get_info(MPI_File fh, MPI_Info *info_used); int PMPI_File_set_view(MPI_File fh, MPI_Offset disp, MPI_Datatype etype, MPI_Datatype filetype, char *datarep, MPI_Info info); int PMPI_File_get_view(MPI_File fh, MPI_Offset *disp, MPI_Datatype *etype, MPI_Datatype *filetype, char *datarep); int PMPI_File_read_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_read_at_all(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write_at_all(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_iread_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_iwrite_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_read(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_read_all(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write_all(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_iread(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_iwrite(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_seek(MPI_File fh, MPI_Offset offset, int whence); int PMPI_File_get_position(MPI_File fh, MPI_Offset *offset); int PMPI_File_get_byte_offset(MPI_File fh, MPI_Offset offset, MPI_Offset *disp); int PMPI_File_read_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_iread_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_iwrite_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_read_ordered(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write_ordered(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_seek_shared(MPI_File fh, MPI_Offset offset, int whence); int PMPI_File_get_position_shared(MPI_File fh, MPI_Offset *offset); int PMPI_File_read_at_all_begin(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype); int PMPI_File_read_at_all_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_write_at_all_begin(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype); int PMPI_File_write_at_all_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_read_all_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int PMPI_File_read_all_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_write_all_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int PMPI_File_write_all_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_read_ordered_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int PMPI_File_read_ordered_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_write_ordered_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int PMPI_File_write_ordered_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_get_type_extent(MPI_File fh, MPI_Datatype datatype, MPI_Aint *extent); int PMPI_File_set_atomicity(MPI_File fh, int flag); int PMPI_File_get_atomicity(MPI_File fh, int *flag); int PMPI_File_sync(MPI_File fh); int PMPI_Finalize(void); int PMPI_Finalized(int *flag); int PMPI_Free_mem(void *base); int PMPI_Gather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int PMPI_Igather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Gatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, int root, MPI_Comm comm); int PMPI_Igatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Get_address(void *location, MPI_Aint *address); int PMPI_Get_count(MPI_Status *status, MPI_Datatype datatype, int *count); int PMPI_Get_elements(MPI_Status *status, MPI_Datatype datatype, int *count); int PMPI_Get(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Win win); int PMPI_Get_processor_name(char *name, int *resultlen); int PMPI_Get_version(int *version, int *subversion); int PMPI_Graph_create(MPI_Comm comm_old, int nnodes, int *index, int *edges, int reorder, MPI_Comm *comm_graph); int PMPI_Graph_get(MPI_Comm comm, int maxindex, int maxedges, int *index, int *edges); int PMPI_Graph_map(MPI_Comm comm, int nnodes, int *index, int *edges, int *newrank); int PMPI_Graph_neighbors_count(MPI_Comm comm, int rank, int *nneighbors); int PMPI_Graph_neighbors(MPI_Comm comm, int rank, int maxneighbors, int *neighbors); int PMPI_Graphdims_get(MPI_Comm comm, int *nnodes, int *nedges); int PMPI_Grequest_complete(MPI_Request request); int PMPI_Grequest_start(MPI_Grequest_query_function *query_fn, MPI_Grequest_free_function *free_fn, MPI_Grequest_cancel_function *cancel_fn, void *extra_state, MPI_Request *request); int PMPI_Group_c2f(MPI_Group group); int PMPI_Group_compare(MPI_Group group1, MPI_Group group2, int *result); int PMPI_Group_difference(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int PMPI_Group_excl(MPI_Group group, int n, int *ranks, MPI_Group *newgroup); MPI_Group PMPI_Group_f2c(int group); int PMPI_Group_free(MPI_Group *group); int PMPI_Group_incl(MPI_Group group, int n, int *ranks, MPI_Group *newgroup); int PMPI_Group_intersection(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int PMPI_Group_range_excl(MPI_Group group, int n, int ranges[][3], MPI_Group *newgroup); int PMPI_Group_range_incl(MPI_Group group, int n, int ranges[][3], MPI_Group *newgroup); int PMPI_Group_rank(MPI_Group group, int *rank); int PMPI_Group_size(MPI_Group group, int *size); int PMPI_Group_translate_ranks(MPI_Group group1, int n, int *ranks1, MPI_Group group2, int *ranks2); int PMPI_Group_union(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int PMPI_Ibsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Improbe(int source, int tag, MPI_Comm comm, int *flag, MPI_Message *message, MPI_Status *status); int PMPI_Imrecv(void *buf, int count, MPI_Datatype type, MPI_Message *message, MPI_Request *request); int PMPI_Info_c2f(MPI_Info info); int PMPI_Info_create(MPI_Info *info); int PMPI_Info_delete(MPI_Info info, char *key); int PMPI_Info_dup(MPI_Info info, MPI_Info *newinfo); MPI_Info PMPI_Info_f2c(int info); int PMPI_Info_free(MPI_Info *info); int PMPI_Info_get(MPI_Info info, char *key, int valuelen, char *value, int *flag); int PMPI_Info_get_nkeys(MPI_Info info, int *nkeys); int PMPI_Info_get_nthkey(MPI_Info info, int n, char *key); int PMPI_Info_get_valuelen(MPI_Info info, char *key, int *valuelen, int *flag); int PMPI_Info_set(MPI_Info info, char *key, char *value); int PMPI_Init(int *argc, char ***argv); int PMPI_Initialized(int *flag); int PMPI_Init_thread(int *argc, char ***argv, int required, int *provided); int PMPI_Intercomm_create(MPI_Comm local_comm, int local_leader, MPI_Comm bridge_comm, int remote_leader, int tag, MPI_Comm *newintercomm); int PMPI_Intercomm_merge(MPI_Comm intercomm, int high, MPI_Comm *newintercomm); int PMPI_Iprobe(int source, int tag, MPI_Comm comm, int *flag, MPI_Status *status); int PMPI_Irecv(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Irsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Isend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Issend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Is_thread_main(int *flag); int PMPI_Keyval_create(MPI_Copy_function *copy_fn, MPI_Delete_function *delete_fn, int *keyval, void *extra_state) ; int PMPI_Keyval_free(int *keyval) ; int PMPI_Lookup_name(char *service_name, MPI_Info info, char *port_name); int PMPI_Message_c2f(MPI_Message message); MPI_Message PMPI_Message_f2c(int message); int PMPI_Mprobe(int source, int tag, MPI_Comm comm, MPI_Message *message, MPI_Status *status); int PMPI_Mrecv(void *buf, int count, MPI_Datatype type, MPI_Message *message, MPI_Status *status); int PMPI_Op_c2f(MPI_Op op); int PMPI_Op_commutative(MPI_Op op, int *commute); int PMPI_Op_create(MPI_User_function *function, int commute, MPI_Op *op); int PMPI_Open_port(MPI_Info info, char *port_name); MPI_Op PMPI_Op_f2c(int op); int PMPI_Op_free(MPI_Op *op); int PMPI_Pack_external(char *datarep, void *inbuf, int incount, MPI_Datatype datatype, void *outbuf, MPI_Aint outsize, MPI_Aint *position); int PMPI_Pack_external_size(char *datarep, int incount, MPI_Datatype datatype, MPI_Aint *size); int PMPI_Pack(void *inbuf, int incount, MPI_Datatype datatype, void *outbuf, int outsize, int *position, MPI_Comm comm); int PMPI_Pack_size(int incount, MPI_Datatype datatype, MPI_Comm comm, int *size); int PMPI_Pcontrol(const int level, ...); int PMPI_Probe(int source, int tag, MPI_Comm comm, MPI_Status *status); int PMPI_Publish_name(char *service_name, MPI_Info info, char *port_name); int PMPI_Put(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Win win); int PMPI_Query_thread(int *provided); int PMPI_Recv_init(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Recv(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Status *status); int PMPI_Reduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, int root, MPI_Comm comm); int PMPI_Ireduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Reduce_local(void *inbuf, void *inoutbuf, int count, MPI_Datatype datatype, MPI_Op); int PMPI_Reduce_scatter(void *sendbuf, void *recvbuf, int *recvcounts, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int PMPI_Ireduce_scatter(void *sendbuf, void *recvbuf, int *recvcounts, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int PMPI_Reduce_scatter_block(void *sendbuf, void *recvbuf, int recvcount, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int PMPI_Ireduce_scatter_block(void *sendbuf, void *recvbuf, int recvcount, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int PMPI_Register_datarep(char *datarep, MPI_Datarep_conversion_function *read_conversion_fn, MPI_Datarep_conversion_function *write_conversion_fn, MPI_Datarep_extent_function *dtype_file_extent_fn, void *extra_state); int PMPI_Request_c2f(MPI_Request request); MPI_Request PMPI_Request_f2c(int request); int PMPI_Request_free(MPI_Request *request); int PMPI_Request_get_status(MPI_Request request, int *flag, MPI_Status *status); int PMPI_Rsend(void *ibuf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int PMPI_Rsend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Scan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int PMPI_Iscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int PMPI_Scatter(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int PMPI_Iscatter(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Scatterv(void *sendbuf, int *sendcounts, int *displs, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int PMPI_Iscatterv(void *sendbuf, int *sendcounts, int *displs, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Send_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Send(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int PMPI_Sendrecv(void *sendbuf, int sendcount, MPI_Datatype sendtype, int dest, int sendtag, void *recvbuf, int recvcount, MPI_Datatype recvtype, int source, int recvtag, MPI_Comm comm, MPI_Status *status); int PMPI_Sendrecv_replace(void * buf, int count, MPI_Datatype datatype, int dest, int sendtag, int source, int recvtag, MPI_Comm comm, MPI_Status *status); int PMPI_Ssend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Ssend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int PMPI_Start(MPI_Request *request); int PMPI_Startall(int count, MPI_Request *array_of_requests); int PMPI_Status_c2f(MPI_Status *c_status, int *f_status); int PMPI_Status_f2c(int *f_status, MPI_Status *c_status); int PMPI_Status_set_cancelled(MPI_Status *status, int flag); int PMPI_Status_set_elements(MPI_Status *status, MPI_Datatype datatype, int count); int PMPI_Testall(int count, MPI_Request array_of_requests[], int *flag, MPI_Status array_of_statuses[]); int PMPI_Testany(int count, MPI_Request array_of_requests[], int *index, int *flag, MPI_Status *status); int PMPI_Test(MPI_Request *request, int *flag, MPI_Status *status); int PMPI_Test_cancelled(MPI_Status *status, int *flag); int PMPI_Testsome(int incount, MPI_Request array_of_requests[], int *outcount, int array_of_indices[], MPI_Status array_of_statuses[]); int PMPI_Topo_test(MPI_Comm comm, int *status); int PMPI_Type_c2f(MPI_Datatype datatype); int PMPI_Type_commit(MPI_Datatype *type); int PMPI_Type_contiguous(int count, MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_darray(int size, int rank, int ndims, int gsize_array[], int distrib_array[], int darg_array[], int psize_array[], int order, MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_f90_complex(int p, int r, MPI_Datatype *newtype); int PMPI_Type_create_f90_integer(int r, MPI_Datatype *newtype); int PMPI_Type_create_f90_real(int p, int r, MPI_Datatype *newtype); int PMPI_Type_create_hindexed(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_hvector(int count, int blocklength, MPI_Aint stride, MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_keyval(MPI_Type_copy_attr_function *type_copy_attr_fn, MPI_Type_delete_attr_function *type_delete_attr_fn, int *type_keyval, void *extra_state); int PMPI_Type_create_indexed_block(int count, int blocklength, int array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_struct(int count, int array_of_block_lengths[], MPI_Aint array_of_displacements[], MPI_Datatype array_of_types[], MPI_Datatype *newtype); int PMPI_Type_create_subarray(int ndims, int size_array[], int subsize_array[], int start_array[], int order, MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_resized(MPI_Datatype oldtype, MPI_Aint lb, MPI_Aint extent, MPI_Datatype *newtype); int PMPI_Type_delete_attr(MPI_Datatype type, int type_keyval); int PMPI_Type_dup(MPI_Datatype type, MPI_Datatype *newtype); int PMPI_Type_extent(MPI_Datatype type, MPI_Aint *extent) ; int PMPI_Type_free(MPI_Datatype *type); int PMPI_Type_free_keyval(int *type_keyval); MPI_Datatype PMPI_Type_f2c(int datatype); int PMPI_Type_get_attr(MPI_Datatype type, int type_keyval, void *attribute_val, int *flag); int PMPI_Type_get_contents(MPI_Datatype mtype, int max_integers, int max_addresses, int max_datatypes, int array_of_integers[], MPI_Aint array_of_addresses[], MPI_Datatype array_of_datatypes[]); int PMPI_Type_get_envelope(MPI_Datatype type, int *num_integers, int *num_addresses, int *num_datatypes, int *combiner); int PMPI_Type_get_extent(MPI_Datatype type, MPI_Aint *lb, MPI_Aint *extent); int PMPI_Type_get_name(MPI_Datatype type, char *type_name, int *resultlen); int PMPI_Type_get_true_extent(MPI_Datatype datatype, MPI_Aint *true_lb, MPI_Aint *true_extent); int PMPI_Type_hindexed(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype) ; int PMPI_Type_hvector(int count, int blocklength, MPI_Aint stride, MPI_Datatype oldtype, MPI_Datatype *newtype) ; int PMPI_Type_indexed(int count, int array_of_blocklengths[], int array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_lb(MPI_Datatype type, MPI_Aint *lb) ; int PMPI_Type_match_size(int typeclass, int size, MPI_Datatype *type); int PMPI_Type_set_attr(MPI_Datatype type, int type_keyval, void *attr_val); int PMPI_Type_set_name(MPI_Datatype type, char *type_name); int PMPI_Type_size(MPI_Datatype type, int *size); int PMPI_Type_struct(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype array_of_types[], MPI_Datatype *newtype) ; int PMPI_Type_ub(MPI_Datatype mtype, MPI_Aint *ub) ; int PMPI_Type_vector(int count, int blocklength, int stride, MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Unpack(void *inbuf, int insize, int *position, void *outbuf, int outcount, MPI_Datatype datatype, MPI_Comm comm); int PMPI_Unpublish_name(char *service_name, MPI_Info info, char *port_name); int PMPI_Unpack_external (char *datarep, void *inbuf, MPI_Aint insize, MPI_Aint *position, void *outbuf, int outcount, MPI_Datatype datatype); int PMPI_Waitall(int count, MPI_Request *array_of_requests, MPI_Status *array_of_statuses); int PMPI_Waitany(int count, MPI_Request *array_of_requests, int *index, MPI_Status *status); int PMPI_Wait(MPI_Request *request, MPI_Status *status); int PMPI_Waitsome(int incount, MPI_Request *array_of_requests, int *outcount, int *array_of_indices, MPI_Status *array_of_statuses); int PMPI_Win_c2f(MPI_Win win); int PMPI_Win_call_errhandler(MPI_Win win, int errorcode); int PMPI_Win_complete(MPI_Win win); int PMPI_Win_create(void *base, MPI_Aint size, int disp_unit, MPI_Info info, MPI_Comm comm, MPI_Win *win); int PMPI_Win_create_errhandler(MPI_Win_errhandler_function *function, MPI_Errhandler *errhandler); int PMPI_Win_create_keyval(MPI_Win_copy_attr_function *win_copy_attr_fn, MPI_Win_delete_attr_function *win_delete_attr_fn, int *win_keyval, void *extra_state); int PMPI_Win_delete_attr(MPI_Win win, int win_keyval); MPI_Win PMPI_Win_f2c(int win); int PMPI_Win_fence(int assert, MPI_Win win); int PMPI_Win_free(MPI_Win *win); int PMPI_Win_free_keyval(int *win_keyval); int PMPI_Win_get_attr(MPI_Win win, int win_keyval, void *attribute_val, int *flag); int PMPI_Win_get_errhandler(MPI_Win win, MPI_Errhandler *errhandler); int PMPI_Win_get_group(MPI_Win win, MPI_Group *group); int PMPI_Win_get_name(MPI_Win win, char *win_name, int *resultlen); int PMPI_Win_lock(int lock_type, int rank, int assert, MPI_Win win); int PMPI_Win_post(MPI_Group group, int assert, MPI_Win win); int PMPI_Win_set_attr(MPI_Win win, int win_keyval, void *attribute_val); int PMPI_Win_set_errhandler(MPI_Win win, MPI_Errhandler errhandler); int PMPI_Win_set_name(MPI_Win win, char *win_name); int PMPI_Win_start(MPI_Group group, int assert, MPI_Win win); int PMPI_Win_test(MPI_Win win, int *flag); int PMPI_Win_unlock(int rank, MPI_Win win); int PMPI_Win_wait(MPI_Win win); double PMPI_Wtick(void); double PMPI_Wtime(void); #line 2281 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c" int ompi_major = 1; int ompi_minor = 6; int ompi_release = 3; Defined "HAVE_OMPI_MAJOR_VERSION" to "1" Defined "HAVE_OMPI_MINOR_VERSION" to "6" Defined "HAVE_OMPI_RELEASE_VERSION" to "3" Checking for functions [MPI_Alltoallw] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Alltoallw(); static void _check_MPI_Alltoallw() { MPI_Alltoallw(); } int main() { _check_MPI_Alltoallw();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Checking for functions [MPI_Type_create_indexed_block] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Type_create_indexed_block(); static void _check_MPI_Type_create_indexed_block() { MPI_Type_create_indexed_block(); } int main() { _check_MPI_Type_create_indexed_block();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Defined "HAVE_MPI_ALLTOALLW" to "1" Checking for functions [MPI_Win_create] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Win_create(); static void _check_MPI_Win_create() { MPI_Win_create(); } int main() { _check_MPI_Win_create();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Defined "HAVE_MPI_WIN_CREATE" to "1" Defined "HAVE_MPI_REPLACE" to "1" Checking for functions [MPI_Comm_spawn MPI_Type_get_envelope MPI_Type_get_extent MPI_Type_dup MPI_Init_thread MPI_Iallreduce MPI_Ibarrier MPI_Finalized MPI_Exscan] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Comm_spawn(); static void _check_MPI_Comm_spawn() { MPI_Comm_spawn(); } char MPI_Type_get_envelope(); static void _check_MPI_Type_get_envelope() { MPI_Type_get_envelope(); } char MPI_Type_get_extent(); static void _check_MPI_Type_get_extent() { MPI_Type_get_extent(); } char MPI_Type_dup(); static void _check_MPI_Type_dup() { MPI_Type_dup(); } char MPI_Init_thread(); static void _check_MPI_Init_thread() { MPI_Init_thread(); } char MPI_Iallreduce(); static void _check_MPI_Iallreduce() { MPI_Iallreduce(); } char MPI_Ibarrier(); static void _check_MPI_Ibarrier() { MPI_Ibarrier(); } char MPI_Finalized(); static void _check_MPI_Finalized() { MPI_Finalized(); } char MPI_Exscan(); static void _check_MPI_Exscan() { MPI_Exscan(); } int main() { _check_MPI_Comm_spawn(); _check_MPI_Type_get_envelope(); _check_MPI_Type_get_extent(); _check_MPI_Type_dup(); _check_MPI_Init_thread(); _check_MPI_Iallreduce(); _check_MPI_Ibarrier(); _check_MPI_Finalized(); _check_MPI_Exscan();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Defined "HAVE_MPI_COMM_SPAWN" to "1" Defined "HAVE_MPI_TYPE_GET_ENVELOPE" to "1" Defined "HAVE_MPI_TYPE_GET_EXTENT" to "1" Defined "HAVE_MPI_TYPE_DUP" to "1" Defined "HAVE_MPI_INIT_THREAD" to "1" Defined "HAVE_MPI_IALLREDUCE" to "1" Defined "HAVE_MPI_IBARRIER" to "1" Defined "HAVE_MPI_FINALIZED" to "1" Defined "HAVE_MPI_EXSCAN" to "1" Checking for functions [MPIX_Iallreduce] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPIX_Iallreduce(); static void _check_MPIX_Iallreduce() { MPIX_Iallreduce(); } int main() { _check_MPIX_Iallreduce();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o: In function `_check_MPIX_Iallreduce': conftest.c:(.text+0x4): undefined reference to `MPIX_Iallreduce' Popping language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c", line 6: warning: variable "combiner" was declared but never referenced int combiner = MPI_COMBINER_DUP;; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { int combiner = MPI_COMBINER_DUP;; return 0; } Defined "HAVE_MPI_COMBINER_DUP" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c", line 6: warning: variable "combiner" was declared but never referenced int combiner = MPI_COMBINER_CONTIGUOUS;; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { int combiner = MPI_COMBINER_CONTIGUOUS;; return 0; } Defined "HAVE_MPI_COMBINER_CONTIGUOUS" to "1" Checking for functions [MPIDI_CH3I_sock_set] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPIDI_CH3I_sock_set(); static void _check_MPIDI_CH3I_sock_set() { MPIDI_CH3I_sock_set(); } int main() { _check_MPIDI_CH3I_sock_set();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o: In function `_check_MPIDI_CH3I_sock_set': conftest.c:(.text+0x4): undefined reference to `MPIDI_CH3I_sock_set' Popping language C Checking for functions [MPIDI_CH3I_sock_fixed_nbc_progress] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPIDI_CH3I_sock_fixed_nbc_progress(); static void _check_MPIDI_CH3I_sock_fixed_nbc_progress() { MPIDI_CH3I_sock_fixed_nbc_progress(); } int main() { _check_MPIDI_CH3I_sock_fixed_nbc_progress();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o: In function `_check_MPIDI_CH3I_sock_fixed_nbc_progress': conftest.c:(.text+0x4): undefined reference to `MPIDI_CH3I_sock_fixed_nbc_progress' Popping language C ================================================================================ TEST checkSharedLibrary from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:130) TESTING: checkSharedLibrary from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:130) Sets flag indicating if MPI libraries are shared or not and determines if MPI libraries CANNOT be used by shared libraries ================================================================================ TEST configureMPIEXEC from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:143) TESTING: configureMPIEXEC from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:143) Checking for mpiexec Checking for program /opt/FJSVtclang/check/mpiexec...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/mpiexec...found Defined make macro "MPIEXEC" to "mpiexec" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #ifdef __cplusplus extern "C" #endif int init(int argc, char *argv[]) { int isInitialized; MPI_Init(&argc, &argv); MPI_Initialized(&isInitialized); return (int) isInitialized; } Pushing language C Popping language C Executing: /usr/bin/ar cr /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/libconftest.a /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o ; /usr/bin/ranlib /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/libconftest.a Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #ifdef __cplusplus extern "C" #endif int checkInit(void) { int isInitialized; MPI_Initialized(&isInitialized); if (isInitialized) MPI_Finalize(); return (int) isInitialized; } Pushing language C Popping language C Executing: /usr/bin/ar cr /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/libconftest.a /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o ; /usr/bin/ranlib /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/libconftest.a Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #ifdef PETSC_HAVE_DLFCN_H #include #endif int main() { int argc = 1; char *argv[2] = {(char *) "conftest", NULL}; void *lib; int (*init)(int, char **); int (*checkInit)(void); lib = dlopen("/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/lib1.a", RTLD_LAZY); if (!lib) { fprintf(stderr, "Could not open lib1.so: %s\n", dlerror()); exit(1); } init = (int (*)(int, char **)) dlsym(lib, "init"); if (!init) { fprintf(stderr, "Could not find initialization function\n"); exit(1); } if (!(*init)(argc, argv)) { fprintf(stderr, "Could not initialize library\n"); exit(1); } lib = dlopen("/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/lib2.a", RTLD_LAZY); if (!lib) { fprintf(stderr, "Could not open lib2.so: %s\n", dlerror()); exit(1); } checkInit = (int (*)(void)) dlsym(lib, "checkInit"); if (!checkInit) { fprintf(stderr, "Could not find initialization check function\n"); exit(1); } if (!(*checkInit)()) { fprintf(stderr, "Did not link with shared library\n"); exit(2); } ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest to see if it can be run Executing: mpiexec /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest Executing: mpiexec /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest ERROR while running executable: Could not execute "mpiexec /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest": [ERR.] PLE 0015 plexec cannot execute as sequential job. Library was not shared Popping language C ================================================================================ TEST alternateConfigureLibrary from config.packages.tetgen(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.tetgen(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.yaml(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.yaml(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.ctetgen(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.ctetgen(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.sprng(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.sprng(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default Pushing language C ================================================================================ TEST configureLibrary from config.packages.ssl(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/ssl.py:23) TESTING: configureLibrary from config.packages.ssl(config/BuildSystem/config/packages/ssl.py:23) ================================================================================== Checking for a functional ssl Checking for library in Compiler specific search SSL: [] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [SSLv23_method] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char SSLv23_method(); static void _check_SSLv23_method() { SSLv23_method(); } int main() { _check_SSLv23_method();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o: In function `_check_SSLv23_method': conftest.c:(.text+0x4): undefined reference to `SSLv23_method' Popping language C Checking for library in Compiler specific search SSL: ['libssl.a', 'libcrypto.a'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [SSLv23_method] in library ['libssl.a', 'libcrypto.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char SSLv23_method(); static void _check_SSLv23_method() { SSLv23_method(); } int main() { _check_SSLv23_method();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -lssl -lcrypto -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_LIBSSL" to "1" Defined "HAVE_LIBCRYPTO" to "1" Popping language C Checking for headers Compiler specific search SSL: [] Pushing language C ================================================================================ TEST checkInclude from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['openssl/ssl.h'] in [] Checking include with compiler flags var CPPFLAGS [] Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 128 "/usr/include/openssl/e_os2.h" #line 137 "/usr/include/openssl/e_os2.h" #line 151 "/usr/include/openssl/e_os2.h" #line 165 "/usr/include/openssl/e_os2.h" #line 206 "/usr/include/openssl/e_os2.h" #line 229 "/usr/include/openssl/e_os2.h" #line 264 "/usr/include/openssl/e_os2.h" #line 288 "/usr/include/openssl/e_os2.h" #line 174 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/comp.h" #line 1 "/usr/include/openssl/crypto.h" #line 1 "/usr/include/stdlib.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/stdlib.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef int wchar_t; #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 34 "/usr/include/stdlib.h" #line 95 "/usr/include/stdlib.h" typedef struct { int quot; int rem; } div_t; typedef struct { long int quot; long int rem; } ldiv_t; typedef struct { long long int quot; long long int rem; } lldiv_t; extern size_t __ctype_get_mb_cur_max (void) ; extern double atof (const char *__nptr) ; extern int atoi (const char *__nptr) ; extern long int atol (const char *__nptr) ; extern long long int atoll (const char *__nptr) ; extern double strtod (const char * __nptr, char ** __endptr) ; extern float strtof (const char * __nptr, char ** __endptr) ; extern long double strtold (const char * __nptr, char ** __endptr) ; extern long int strtol (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long int strtoul (const char * __nptr, char ** __endptr, int __base) ; extern long long int strtoq (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long long int strtouq (const char * __nptr, char ** __endptr, int __base) ; extern long long int strtoll (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long long int strtoull (const char * __nptr, char ** __endptr, int __base) ; #line 274 "/usr/include/stdlib.h" #line 305 "/usr/include/stdlib.h" extern char *l64a (long int __n) ; extern long int a64l (const char *__s) ; #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; typedef char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 321 "/usr/include/stdlib.h" extern long int random (void) ; extern void srandom (unsigned int __seed) ; extern char *initstate (unsigned int __seed, char *__statebuf, size_t __statelen) ; extern char *setstate (char *__statebuf) ; struct random_data { int32_t *fptr; int32_t *rptr; int32_t *state; int rand_type; int rand_deg; int rand_sep; int32_t *end_ptr; }; extern int random_r (struct random_data * __buf, int32_t * __result) ; extern int srandom_r (unsigned int __seed, struct random_data *__buf) ; extern int initstate_r (unsigned int __seed, char * __statebuf, size_t __statelen, struct random_data * __buf) ; extern int setstate_r (char * __statebuf, struct random_data * __buf) ; extern int rand (void) ; extern void srand (unsigned int __seed) ; extern int rand_r (unsigned int *__seed) ; extern double drand48 (void) ; extern double erand48 (unsigned short int __xsubi[3]) ; extern long int lrand48 (void) ; extern long int nrand48 (unsigned short int __xsubi[3]) ; extern long int mrand48 (void) ; extern long int jrand48 (unsigned short int __xsubi[3]) ; extern void srand48 (long int __seedval) ; extern unsigned short int *seed48 (unsigned short int __seed16v[3]) ; extern void lcong48 (unsigned short int __param[7]) ; struct drand48_data { unsigned short int __x[3]; unsigned short int __old_x[3]; unsigned short int __c; unsigned short int __init; unsigned long long int __a; }; extern int drand48_r (struct drand48_data * __buffer, double * __result) ; extern int erand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, double * __result) ; extern int lrand48_r (struct drand48_data * __buffer, long int * __result) ; extern int nrand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, long int * __result) ; extern int mrand48_r (struct drand48_data * __buffer, long int * __result) ; extern int jrand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, long int * __result) ; extern int srand48_r (long int __seedval, struct drand48_data *__buffer) ; extern int seed48_r (unsigned short int __seed16v[3], struct drand48_data *__buffer) ; extern int lcong48_r (unsigned short int __param[7], struct drand48_data *__buffer) ; extern void *malloc (size_t __size) ; extern void *calloc (size_t __nmemb, size_t __size) ; extern void *realloc (void *__ptr, size_t __size) ; extern void free (void *__ptr) ; extern void cfree (void *__ptr) ; #line 1 "/usr/include/alloca.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/alloca.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 26 "/usr/include/alloca.h" extern void *alloca (size_t __size) ; #line 498 "/usr/include/stdlib.h" extern void *valloc (size_t __size) ; extern int posix_memalign (void **__memptr, size_t __alignment, size_t __size) ; extern void abort (void) ; extern int atexit (void (*__func) (void)) ; extern int on_exit (void (*__func) (int __status, void *__arg), void *__arg) ; extern void exit (int __status) ; extern void _Exit (int __status) ; extern char *getenv (const char *__name) ; extern char *__secure_getenv (const char *__name) ; extern int putenv (char *__string) ; extern int setenv (const char *__name, const char *__value, int __replace) ; extern int unsetenv (const char *__name) ; extern int clearenv (void) ; extern char *mktemp (char *__template) ; extern int mkstemp (char *__template) ; #line 607 "/usr/include/stdlib.h" extern char *mkdtemp (char *__template) ; #line 638 "/usr/include/stdlib.h" extern int system (const char *__command) ; #line 655 "/usr/include/stdlib.h" extern char *realpath (const char * __name, char * __resolved) ; typedef int (*__compar_fn_t) (const void *, const void *); extern void *bsearch (const void *__key, const void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; extern void qsort (void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; extern int abs (int __x) ; extern long int labs (long int __x) ; extern long long int llabs (long long int __x) ; extern div_t div (int __numer, int __denom) ; extern ldiv_t ldiv (long int __numer, long int __denom) ; extern lldiv_t lldiv (long long int __numer, long long int __denom) ; extern char *ecvt (double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *fcvt (double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *gcvt (double __value, int __ndigit, char *__buf) ; extern char *qecvt (long double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *qfcvt (long double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *qgcvt (long double __value, int __ndigit, char *__buf) ; extern int ecvt_r (double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int fcvt_r (double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int qecvt_r (long double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int qfcvt_r (long double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int mblen (const char *__s, size_t __n) ; extern int mbtowc (wchar_t * __pwc, const char * __s, size_t __n) ; extern int wctomb (char *__s, wchar_t __wchar) ; extern size_t mbstowcs (wchar_t * __pwcs, const char * __s, size_t __n) ; extern size_t wcstombs (char * __s, const wchar_t * __pwcs, size_t __n) ; extern int rpmatch (const char *__response) ; #line 820 "/usr/include/stdlib.h" extern int posix_openpt (int __oflag) ; #line 851 "/usr/include/stdlib.h" #line 862 "/usr/include/stdlib.h" extern int getloadavg (double __loadavg[], int __nelem) ; #line 879 "/usr/include/stdlib.h" #line 121 "/usr/include/openssl/crypto.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 123 "/usr/include/openssl/crypto.h" #line 1 "/usr/include/stdio.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 29 "/usr/include/stdio.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 35 "/usr/include/stdio.h" struct _IO_FILE; typedef struct _IO_FILE FILE; typedef struct _IO_FILE __FILE; #line 1 "/usr/include/libio.h" #line 1 "/usr/include/_G_config.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 16 "/usr/include/_G_config.h" #line 1 "/usr/include/wchar.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned int wint_t; #line 53 "/usr/include/wchar.h" #line 64 "/usr/include/wchar.h" #line 74 "/usr/include/wchar.h" typedef struct { int __count; union { wint_t __wch; char __wchb[4]; } __value; } __mbstate_t; #line 841 "/usr/include/wchar.h" #line 21 "/usr/include/_G_config.h" typedef struct { __off_t __pos; __mbstate_t __state; } _G_fpos_t; typedef struct { __off64_t __pos; __mbstate_t __state; } _G_fpos64_t; #line 52 "/usr/include/_G_config.h" typedef int _G_int16_t ; typedef int _G_int32_t ; typedef unsigned int _G_uint16_t ; typedef unsigned int _G_uint32_t ; #line 74 "/usr/include/_G_config.h" #line 33 "/usr/include/libio.h" #line 49 "/usr/include/libio.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stdarg.h" typedef void *va_list; #line 27 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stdarg.h" #line 38 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stdarg.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stdarg.h" #line 54 "/usr/include/libio.h" #line 73 "/usr/include/libio.h" #line 88 "/usr/include/libio.h" #line 104 "/usr/include/libio.h" #line 113 "/usr/include/libio.h" #line 139 "/usr/include/libio.h" #line 149 "/usr/include/libio.h" #line 168 "/usr/include/libio.h" struct _IO_jump_t; struct _IO_FILE; #line 180 "/usr/include/libio.h" typedef void _IO_lock_t; struct _IO_marker { struct _IO_marker *_next; struct _IO_FILE *_sbuf; int _pos; #line 203 "/usr/include/libio.h" }; enum __codecvt_result { __codecvt_ok, __codecvt_partial, __codecvt_error, __codecvt_noconv }; #line 270 "/usr/include/libio.h" struct _IO_FILE { int _flags; char* _IO_read_ptr; char* _IO_read_end; char* _IO_read_base; char* _IO_write_base; char* _IO_write_ptr; char* _IO_write_end; char* _IO_buf_base; char* _IO_buf_end; char *_IO_save_base; char *_IO_backup_base; char *_IO_save_end; struct _IO_marker *_markers; struct _IO_FILE *_chain; int _fileno; int _flags2; __off_t _old_offset; unsigned short _cur_column; signed char _vtable_offset; char _shortbuf[1]; _IO_lock_t *_lock; #line 319 "/usr/include/libio.h" __off64_t _offset; #line 328 "/usr/include/libio.h" void *__pad1; void *__pad2; void *__pad3; void *__pad4; size_t __pad5; int _mode; char _unused2[15 * sizeof (int) - 4 * sizeof (void *) - sizeof (size_t)]; }; typedef struct _IO_FILE _IO_FILE; struct _IO_FILE_plus; extern struct _IO_FILE_plus _IO_2_1_stdin_; extern struct _IO_FILE_plus _IO_2_1_stdout_; extern struct _IO_FILE_plus _IO_2_1_stderr_; #line 358 "/usr/include/libio.h" typedef __ssize_t __io_read_fn (void *__cookie, char *__buf, size_t __nbytes); typedef __ssize_t __io_write_fn (void *__cookie, const char *__buf, size_t __n); typedef int __io_seek_fn (void *__cookie, __off64_t *__pos, int __w); typedef int __io_close_fn (void *__cookie); #line 410 "/usr/include/libio.h" extern int __underflow (_IO_FILE *); extern int __uflow (_IO_FILE *); extern int __overflow (_IO_FILE *, int); #line 442 "/usr/include/libio.h" #line 454 "/usr/include/libio.h" extern int _IO_getc (_IO_FILE *__fp); extern int _IO_putc (int __c, _IO_FILE *__fp); extern int _IO_feof (_IO_FILE *__fp) ; extern int _IO_ferror (_IO_FILE *__fp) ; extern int _IO_peekc_locked (_IO_FILE *__fp); extern void _IO_flockfile (_IO_FILE *) ; extern void _IO_funlockfile (_IO_FILE *) ; extern int _IO_ftrylockfile (_IO_FILE *) ; #line 487 "/usr/include/libio.h" extern int _IO_vfscanf (_IO_FILE * , const char * , va_list, int *); extern int _IO_vfprintf (_IO_FILE *, const char *, va_list); extern __ssize_t _IO_padn (_IO_FILE *, int, __ssize_t); extern size_t _IO_sgetn (_IO_FILE *, void *, size_t); extern __off64_t _IO_seekoff (_IO_FILE *, __off64_t, int, int); extern __off64_t _IO_seekpos (_IO_FILE *, __off64_t, int); extern void _IO_free_backup_area (_IO_FILE *) ; #line 544 "/usr/include/libio.h" #line 76 "/usr/include/stdio.h" #line 87 "/usr/include/stdio.h" typedef _G_fpos_t fpos_t; #line 1 "/usr/include/bits/stdio_lim.h" #line 142 "/usr/include/stdio.h" extern struct _IO_FILE *stdin; extern struct _IO_FILE *stdout; extern struct _IO_FILE *stderr; extern int remove (const char *__filename) ; extern int rename (const char *__old, const char *__new) ; extern FILE *tmpfile (void) ; #line 182 "/usr/include/stdio.h" extern char *tmpnam (char *__s) ; extern char *tmpnam_r (char *__s) ; extern char *tempnam (const char *__dir, const char *__pfx) ; extern int fclose (FILE *__stream); extern int fflush (FILE *__stream); extern int fflush_unlocked (FILE *__stream); #line 243 "/usr/include/stdio.h" extern FILE *fopen (const char * __filename, const char * __modes) ; extern FILE *freopen (const char * __filename, const char * __modes, FILE * __stream) ; #line 274 "/usr/include/stdio.h" #line 282 "/usr/include/stdio.h" extern FILE *fdopen (int __fd, const char *__modes) ; #line 304 "/usr/include/stdio.h" extern void setbuf (FILE * __stream, char * __buf) ; extern int setvbuf (FILE * __stream, char * __buf, int __modes, size_t __n) ; extern void setbuffer (FILE * __stream, char * __buf, size_t __size) ; extern void setlinebuf (FILE *__stream) ; extern int fprintf (FILE * __stream, const char * __format, ...); extern int printf (const char * __format, ...); extern int sprintf (char * __s, const char * __format, ...) ; extern int vfprintf (FILE * __s, const char * __format, va_list __arg); extern int vprintf (const char * __format, va_list __arg); extern int vsprintf (char * __s, const char * __format, va_list __arg) ; extern int snprintf (char * __s, size_t __maxlen, const char * __format, ...) ; extern int vsnprintf (char * __s, size_t __maxlen, const char * __format, va_list __arg) ; #line 398 "/usr/include/stdio.h" extern int fscanf (FILE * __stream, const char * __format, ...) ; extern int scanf (const char * __format, ...) ; extern int sscanf (const char * __s, const char * __format, ...) ; #line 432 "/usr/include/stdio.h" extern int __isoc99_fscanf (FILE * __stream, const char * __format, ...) ; extern int __isoc99_scanf (const char * __format, ...) ; extern int __isoc99_sscanf (const char * __s, const char * __format, ...) ; extern int vfscanf (FILE * __s, const char * __format, va_list __arg) ; extern int vscanf (const char * __format, va_list __arg) ; extern int vsscanf (const char * __s, const char * __format, va_list __arg) ; #line 488 "/usr/include/stdio.h" extern int __isoc99_vfscanf (FILE * __s, const char * __format, va_list __arg) ; extern int __isoc99_vscanf (const char * __format, va_list __arg) ; extern int __isoc99_vsscanf (const char * __s, const char * __format, va_list __arg) ; extern int fgetc (FILE *__stream); extern int getc (FILE *__stream); extern int getchar (void); extern int getc_unlocked (FILE *__stream); extern int getchar_unlocked (void); extern int fgetc_unlocked (FILE *__stream); extern int fputc (int __c, FILE *__stream); extern int putc (int __c, FILE *__stream); extern int putchar (int __c); extern int fputc_unlocked (int __c, FILE *__stream); extern int putc_unlocked (int __c, FILE *__stream); extern int putchar_unlocked (int __c); extern int getw (FILE *__stream); extern int putw (int __w, FILE *__stream); extern char *fgets (char * __s, int __n, FILE * __stream) ; extern char *gets (char *__s) ; #line 623 "/usr/include/stdio.h" #line 653 "/usr/include/stdio.h" extern int fputs (const char * __s, FILE * __stream); extern int puts (const char *__s); extern int ungetc (int __c, FILE *__stream); extern size_t fread (void * __ptr, size_t __size, size_t __n, FILE * __stream) ; extern size_t fwrite (const void * __ptr, size_t __size, size_t __n, FILE * __s) ; #line 700 "/usr/include/stdio.h" extern size_t fread_unlocked (void * __ptr, size_t __size, size_t __n, FILE * __stream) ; extern size_t fwrite_unlocked (const void * __ptr, size_t __size, size_t __n, FILE * __stream) ; extern int fseek (FILE *__stream, long int __off, int __whence); extern long int ftell (FILE *__stream) ; extern void rewind (FILE *__stream); extern int fseeko (FILE *__stream, __off_t __off, int __whence); extern __off_t ftello (FILE *__stream) ; #line 762 "/usr/include/stdio.h" extern int fgetpos (FILE * __stream, fpos_t * __pos); extern int fsetpos (FILE *__stream, const fpos_t *__pos); #line 786 "/usr/include/stdio.h" #line 794 "/usr/include/stdio.h" extern void clearerr (FILE *__stream) ; extern int feof (FILE *__stream) ; extern int ferror (FILE *__stream) ; extern void clearerr_unlocked (FILE *__stream) ; extern int feof_unlocked (FILE *__stream) ; extern int ferror_unlocked (FILE *__stream) ; extern void perror (const char *__s); #line 1 "/usr/include/bits/sys_errlist.h" extern int sys_nerr; extern const char *const sys_errlist[]; #line 825 "/usr/include/stdio.h" extern int fileno (FILE *__stream) ; extern int fileno_unlocked (FILE *__stream) ; extern FILE *popen (const char *__command, const char *__modes) ; extern int pclose (FILE *__stream); extern char *ctermid (char *__s) ; #line 878 "/usr/include/stdio.h" extern void flockfile (FILE *__stream) ; extern int ftrylockfile (FILE *__stream) ; extern void funlockfile (FILE *__stream) ; #line 901 "/usr/include/stdio.h" #line 913 "/usr/include/stdio.h" #line 126 "/usr/include/openssl/crypto.h" #line 1 "/usr/include/openssl/stack.h" typedef struct stack_st { int num; char **data; int sorted; int num_alloc; int (*comp) (const char *const *, const char *const *); } STACK; int sk_num(const STACK *); char *sk_value(const STACK *, int); char *sk_set(STACK *, int, char *); STACK *sk_new(int (*cmp) (const char *const *, const char *const *)); STACK *sk_new_null(void); void sk_free(STACK *); void sk_pop_free(STACK * st, void (*func) (void *)); int sk_insert(STACK * sk, char *data, int where); char *sk_delete(STACK * st, int loc); char *sk_delete_ptr(STACK * st, char *p); int sk_find(STACK * st, char *data); int sk_find_ex(STACK * st, char *data); int sk_push(STACK * st, char *data); int sk_unshift(STACK * st, char *data); char *sk_shift(STACK * st); char *sk_pop(STACK * st); void sk_zero(STACK * st); int (*sk_set_cmp_func(STACK * sk, int (*c) (const char *const *, const char *const *))) (const char *const *, const char *const *); STACK *sk_dup(STACK * st); void sk_sort(STACK * st); int sk_is_sorted(const STACK * st); #line 129 "/usr/include/openssl/crypto.h" #line 1 "/usr/include/openssl/safestack.h" #line 158 "/usr/include/openssl/safestack.h" #line 207 "/usr/include/openssl/safestack.h" #line 247 "/usr/include/openssl/safestack.h" #line 269 "/usr/include/openssl/safestack.h" #line 291 "/usr/include/openssl/safestack.h" #line 313 "/usr/include/openssl/safestack.h" #line 335 "/usr/include/openssl/safestack.h" #line 357 "/usr/include/openssl/safestack.h" #line 379 "/usr/include/openssl/safestack.h" #line 401 "/usr/include/openssl/safestack.h" #line 423 "/usr/include/openssl/safestack.h" #line 445 "/usr/include/openssl/safestack.h" #line 467 "/usr/include/openssl/safestack.h" #line 489 "/usr/include/openssl/safestack.h" #line 511 "/usr/include/openssl/safestack.h" #line 533 "/usr/include/openssl/safestack.h" #line 555 "/usr/include/openssl/safestack.h" #line 577 "/usr/include/openssl/safestack.h" #line 599 "/usr/include/openssl/safestack.h" #line 621 "/usr/include/openssl/safestack.h" #line 643 "/usr/include/openssl/safestack.h" #line 665 "/usr/include/openssl/safestack.h" #line 687 "/usr/include/openssl/safestack.h" #line 709 "/usr/include/openssl/safestack.h" #line 731 "/usr/include/openssl/safestack.h" #line 753 "/usr/include/openssl/safestack.h" #line 775 "/usr/include/openssl/safestack.h" #line 797 "/usr/include/openssl/safestack.h" #line 819 "/usr/include/openssl/safestack.h" #line 841 "/usr/include/openssl/safestack.h" #line 863 "/usr/include/openssl/safestack.h" #line 885 "/usr/include/openssl/safestack.h" #line 907 "/usr/include/openssl/safestack.h" #line 929 "/usr/include/openssl/safestack.h" #line 951 "/usr/include/openssl/safestack.h" #line 973 "/usr/include/openssl/safestack.h" #line 995 "/usr/include/openssl/safestack.h" #line 1017 "/usr/include/openssl/safestack.h" #line 1039 "/usr/include/openssl/safestack.h" #line 1061 "/usr/include/openssl/safestack.h" #line 1083 "/usr/include/openssl/safestack.h" #line 1105 "/usr/include/openssl/safestack.h" #line 1127 "/usr/include/openssl/safestack.h" #line 1149 "/usr/include/openssl/safestack.h" #line 1171 "/usr/include/openssl/safestack.h" #line 1193 "/usr/include/openssl/safestack.h" #line 1215 "/usr/include/openssl/safestack.h" #line 1237 "/usr/include/openssl/safestack.h" #line 1259 "/usr/include/openssl/safestack.h" #line 1281 "/usr/include/openssl/safestack.h" #line 1303 "/usr/include/openssl/safestack.h" #line 1325 "/usr/include/openssl/safestack.h" #line 1347 "/usr/include/openssl/safestack.h" #line 1369 "/usr/include/openssl/safestack.h" #line 1391 "/usr/include/openssl/safestack.h" #line 1413 "/usr/include/openssl/safestack.h" #line 1435 "/usr/include/openssl/safestack.h" #line 1457 "/usr/include/openssl/safestack.h" #line 1479 "/usr/include/openssl/safestack.h" #line 1501 "/usr/include/openssl/safestack.h" #line 1523 "/usr/include/openssl/safestack.h" #line 1545 "/usr/include/openssl/safestack.h" #line 1567 "/usr/include/openssl/safestack.h" #line 1589 "/usr/include/openssl/safestack.h" #line 1611 "/usr/include/openssl/safestack.h" #line 1633 "/usr/include/openssl/safestack.h" #line 1655 "/usr/include/openssl/safestack.h" #line 1677 "/usr/include/openssl/safestack.h" #line 1699 "/usr/include/openssl/safestack.h" #line 1721 "/usr/include/openssl/safestack.h" #line 1743 "/usr/include/openssl/safestack.h" #line 1765 "/usr/include/openssl/safestack.h" #line 1787 "/usr/include/openssl/safestack.h" #line 1796 "/usr/include/openssl/safestack.h" #line 1805 "/usr/include/openssl/safestack.h" #line 1814 "/usr/include/openssl/safestack.h" #line 1823 "/usr/include/openssl/safestack.h" #line 1832 "/usr/include/openssl/safestack.h" #line 1841 "/usr/include/openssl/safestack.h" #line 1850 "/usr/include/openssl/safestack.h" #line 1859 "/usr/include/openssl/safestack.h" #line 1868 "/usr/include/openssl/safestack.h" #line 1877 "/usr/include/openssl/safestack.h" #line 1886 "/usr/include/openssl/safestack.h" #line 1895 "/usr/include/openssl/safestack.h" #line 1904 "/usr/include/openssl/safestack.h" #line 1913 "/usr/include/openssl/safestack.h" #line 1922 "/usr/include/openssl/safestack.h" #line 1931 "/usr/include/openssl/safestack.h" #line 1940 "/usr/include/openssl/safestack.h" #line 1949 "/usr/include/openssl/safestack.h" #line 1958 "/usr/include/openssl/safestack.h" #line 1967 "/usr/include/openssl/safestack.h" #line 1976 "/usr/include/openssl/safestack.h" #line 1985 "/usr/include/openssl/safestack.h" #line 130 "/usr/include/openssl/crypto.h" #line 1 "/usr/include/openssl/opensslv.h" #line 36 "/usr/include/openssl/opensslv.h" #line 131 "/usr/include/openssl/crypto.h" #line 1 "/usr/include/openssl/ossl_typ.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 59 "/usr/include/openssl/ossl_typ.h" #line 79 "/usr/include/openssl/ossl_typ.h" typedef struct asn1_string_st ASN1_INTEGER; typedef struct asn1_string_st ASN1_ENUMERATED; typedef struct asn1_string_st ASN1_BIT_STRING; typedef struct asn1_string_st ASN1_OCTET_STRING; typedef struct asn1_string_st ASN1_PRINTABLESTRING; typedef struct asn1_string_st ASN1_T61STRING; typedef struct asn1_string_st ASN1_IA5STRING; typedef struct asn1_string_st ASN1_GENERALSTRING; typedef struct asn1_string_st ASN1_UNIVERSALSTRING; typedef struct asn1_string_st ASN1_BMPSTRING; typedef struct asn1_string_st ASN1_UTCTIME; typedef struct asn1_string_st ASN1_TIME; typedef struct asn1_string_st ASN1_GENERALIZEDTIME; typedef struct asn1_string_st ASN1_VISIBLESTRING; typedef struct asn1_string_st ASN1_UTF8STRING; typedef int ASN1_BOOLEAN; typedef int ASN1_NULL; #line 106 "/usr/include/openssl/ossl_typ.h" typedef struct bignum_st BIGNUM; typedef struct bignum_ctx BN_CTX; typedef struct bn_blinding_st BN_BLINDING; typedef struct bn_mont_ctx_st BN_MONT_CTX; typedef struct bn_recp_ctx_st BN_RECP_CTX; typedef struct bn_gencb_st BN_GENCB; typedef struct buf_mem_st BUF_MEM; typedef struct evp_cipher_st EVP_CIPHER; typedef struct evp_cipher_ctx_st EVP_CIPHER_CTX; typedef struct env_md_st EVP_MD; typedef struct env_md_ctx_st EVP_MD_CTX; typedef struct evp_pkey_st EVP_PKEY; typedef struct dh_st DH; typedef struct dh_method DH_METHOD; typedef struct dsa_st DSA; typedef struct dsa_method DSA_METHOD; typedef struct rsa_st RSA; typedef struct rsa_meth_st RSA_METHOD; typedef struct rand_meth_st RAND_METHOD; typedef struct ecdh_method ECDH_METHOD; typedef struct ecdsa_method ECDSA_METHOD; typedef struct x509_st X509; typedef struct X509_algor_st X509_ALGOR; typedef struct X509_crl_st X509_CRL; typedef struct X509_name_st X509_NAME; typedef struct x509_store_st X509_STORE; typedef struct x509_store_ctx_st X509_STORE_CTX; typedef struct ssl_st SSL; typedef struct ssl_ctx_st SSL_CTX; typedef struct v3_ext_ctx X509V3_CTX; typedef struct conf_st CONF; typedef struct store_st STORE; typedef struct store_method_st STORE_METHOD; typedef struct ui_st UI; typedef struct ui_method_st UI_METHOD; typedef struct st_ERR_FNS ERR_FNS; typedef struct engine_st ENGINE; typedef struct X509_POLICY_NODE_st X509_POLICY_NODE; typedef struct X509_POLICY_LEVEL_st X509_POLICY_LEVEL; typedef struct X509_POLICY_TREE_st X509_POLICY_TREE; typedef struct X509_POLICY_CACHE_st X509_POLICY_CACHE; typedef struct crypto_ex_data_st CRYPTO_EX_DATA; typedef int CRYPTO_EX_new (void *parent, void *ptr, CRYPTO_EX_DATA *ad, int idx, long argl, void *argp); typedef void CRYPTO_EX_free (void *parent, void *ptr, CRYPTO_EX_DATA *ad, int idx, long argl, void *argp); typedef int CRYPTO_EX_dup (CRYPTO_EX_DATA *to, CRYPTO_EX_DATA *from, void *from_d, int idx, long argl, void *argp); typedef struct ocsp_req_ctx_st OCSP_REQ_CTX; typedef struct ocsp_response_st OCSP_RESPONSE; typedef struct ocsp_responder_id_st OCSP_RESPID; #line 132 "/usr/include/openssl/crypto.h" #line 1 "/usr/include/openssl/symhacks.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 59 "/usr/include/openssl/symhacks.h" #line 401 "/usr/include/openssl/symhacks.h" #line 434 "/usr/include/openssl/symhacks.h" #line 142 "/usr/include/openssl/crypto.h" #line 173 "/usr/include/openssl/crypto.h" typedef struct openssl_item_st { int code; void *value; size_t value_size; size_t *value_length; } OPENSSL_ITEM; #line 233 "/usr/include/openssl/crypto.h" #line 259 "/usr/include/openssl/crypto.h" typedef struct { int references; struct CRYPTO_dynlock_value *data; } CRYPTO_dynlock; typedef struct bio_st BIO_dummy; struct crypto_ex_data_st { STACK *sk; int dummy; }; typedef struct crypto_ex_data_func_st { long argl; void *argp; CRYPTO_EX_new *new_func; CRYPTO_EX_free *free_func; CRYPTO_EX_dup *dup_func; } CRYPTO_EX_DATA_FUNCS; #line 338 "/usr/include/openssl/crypto.h" void CRYPTO_malloc_debug_init(void); int CRYPTO_mem_ctrl(int mode); int CRYPTO_is_mem_check_on(void); #line 387 "/usr/include/openssl/crypto.h" const char *SSLeay_version(int type); unsigned long SSLeay(void); int OPENSSL_issetugid(void); typedef struct st_CRYPTO_EX_DATA_IMPL CRYPTO_EX_DATA_IMPL; const CRYPTO_EX_DATA_IMPL *CRYPTO_get_ex_data_implementation(void); int CRYPTO_set_ex_data_implementation(const CRYPTO_EX_DATA_IMPL *i); int CRYPTO_ex_data_new_class(void); int CRYPTO_get_ex_new_index(int class_index, long argl, void *argp, CRYPTO_EX_new *new_func, CRYPTO_EX_dup *dup_func, CRYPTO_EX_free *free_func); int CRYPTO_new_ex_data(int class_index, void *obj, CRYPTO_EX_DATA *ad); int CRYPTO_dup_ex_data(int class_index, CRYPTO_EX_DATA *to, CRYPTO_EX_DATA *from); void CRYPTO_free_ex_data(int class_index, void *obj, CRYPTO_EX_DATA *ad); int CRYPTO_set_ex_data(CRYPTO_EX_DATA *ad, int idx, void *val); void *CRYPTO_get_ex_data(const CRYPTO_EX_DATA *ad, int idx); void CRYPTO_cleanup_all_ex_data(void); int CRYPTO_get_new_lockid(char *name); int CRYPTO_num_locks(void); void CRYPTO_lock(int mode, int type, const char *file, int line); void CRYPTO_set_locking_callback(void (*func) (int mode, int type, const char *file, int line)); void (*CRYPTO_get_locking_callback(void)) (int mode, int type, const char *file, int line); void CRYPTO_set_add_lock_callback(int (*func) (int *num, int mount, int type, const char *file, int line)); int (*CRYPTO_get_add_lock_callback(void)) (int *num, int mount, int type, const char *file, int line); void CRYPTO_set_id_callback(unsigned long (*func) (void)); unsigned long (*CRYPTO_get_id_callback(void)) (void); unsigned long CRYPTO_thread_id(void); const char *CRYPTO_get_lock_name(int type); int CRYPTO_add_lock(int *pointer, int amount, int type, const char *file, int line); void int_CRYPTO_set_do_dynlock_callback(void (*do_dynlock_cb) (int mode, int type, const char *file, int line)); int CRYPTO_get_new_dynlockid(void); void CRYPTO_destroy_dynlockid(int i); struct CRYPTO_dynlock_value *CRYPTO_get_dynlock_value(int i); void CRYPTO_set_dynlock_create_callback(struct CRYPTO_dynlock_value *(*dyn_create_function) (const char *file, int line)); void CRYPTO_set_dynlock_lock_callback(void (*dyn_lock_function) (int mode, struct CRYPTO_dynlock_value *l, const char *file, int line)); void CRYPTO_set_dynlock_destroy_callback(void (*dyn_destroy_function) (struct CRYPTO_dynlock_value *l, const char *file, int line)); struct CRYPTO_dynlock_value *(*CRYPTO_get_dynlock_create_callback(void)) (const char *file, int line); void (*CRYPTO_get_dynlock_lock_callback(void)) (int mode, struct CRYPTO_dynlock_value *l, const char *file, int line); void (*CRYPTO_get_dynlock_destroy_callback(void)) (struct CRYPTO_dynlock_value *l, const char *file, int line); int CRYPTO_set_mem_functions(void *(*m) (size_t), void *(*r) (void *, size_t), void (*f) (void *)); int CRYPTO_set_locked_mem_functions(void *(*m) (size_t), void (*free_func) (void *)); int CRYPTO_set_mem_ex_functions(void *(*m) (size_t, const char *, int), void *(*r) (void *, size_t, const char *, int), void (*f) (void *)); int CRYPTO_set_locked_mem_ex_functions(void *(*m) (size_t, const char *, int), void (*free_func) (void *)); int CRYPTO_set_mem_debug_functions(void (*m) (void *, int, const char *, int, int), void (*r) (void *, void *, int, const char *, int, int), void (*f) (void *, int), void (*so) (long), long (*go) (void)); void CRYPTO_set_mem_info_functions(int (*push_info_fn) (const char *info, const char *file, int line), int (*pop_info_fn) (void), int (*remove_all_info_fn) (void)); void CRYPTO_get_mem_functions(void *(**m) (size_t), void *(**r) (void *, size_t), void (**f) (void *)); void CRYPTO_get_locked_mem_functions(void *(**m) (size_t), void (**f) (void *)); void CRYPTO_get_mem_ex_functions(void *(**m) (size_t, const char *, int), void *(**r) (void *, size_t, const char *, int), void (**f) (void *)); void CRYPTO_get_locked_mem_ex_functions(void *(**m) (size_t, const char *, int), void (**f) (void *)); void CRYPTO_get_mem_debug_functions(void (**m) (void *, int, const char *, int, int), void (**r) (void *, void *, int, const char *, int, int), void (**f) (void *, int), void (**so) (long), long (**go) (void)); void *CRYPTO_malloc_locked(int num, const char *file, int line); void CRYPTO_free_locked(void *); void *CRYPTO_malloc(int num, const char *file, int line); char *CRYPTO_strdup(const char *str, const char *file, int line); void CRYPTO_free(void *); void *CRYPTO_realloc(void *addr, int num, const char *file, int line); void *CRYPTO_realloc_clean(void *addr, int old_num, int num, const char *file, int line); void *CRYPTO_remalloc(void *addr, int num, const char *file, int line); void OPENSSL_cleanse(void *ptr, size_t len); void CRYPTO_set_mem_debug_options(long bits); long CRYPTO_get_mem_debug_options(void); int CRYPTO_push_info_(const char *info, const char *file, int line); int CRYPTO_pop_info(void); int CRYPTO_remove_all_info(void); void CRYPTO_dbg_malloc(void *addr, int num, const char *file, int line, int before_p); void CRYPTO_dbg_realloc(void *addr1, void *addr2, int num, const char *file, int line, int before_p); void CRYPTO_dbg_free(void *addr, int before_p); void CRYPTO_dbg_set_options(long bits); long CRYPTO_dbg_get_options(void); int CRYPTO_dbg_push_info(const char *info, const char *file, int line); int CRYPTO_dbg_pop_info(void); int CRYPTO_dbg_remove_all_info(void); void CRYPTO_mem_leaks_fp(FILE *); void CRYPTO_mem_leaks(struct bio_st *bio); typedef void *CRYPTO_MEM_LEAK_CB (unsigned long, const char *, int, int, void *); void CRYPTO_mem_leaks_cb(CRYPTO_MEM_LEAK_CB *cb); void OpenSSLDie(const char *file, int line, const char *assertion); unsigned long *OPENSSL_ia32cap_loc(void); int OPENSSL_isservice(void); #line 633 "/usr/include/openssl/crypto.h" void OPENSSL_init(void); int CRYPTO_memcmp(const void *a, const void *b, size_t len); void ERR_load_CRYPTO_strings(void); #line 673 "/usr/include/openssl/crypto.h" #line 6 "/usr/include/openssl/comp.h" typedef struct comp_ctx_st COMP_CTX; typedef struct comp_method_st { int type; const char *name; int (*init) (COMP_CTX *ctx); void (*finish) (COMP_CTX *ctx); int (*compress) (COMP_CTX *ctx, unsigned char *out, unsigned int olen, unsigned char *in, unsigned int ilen); int (*expand) (COMP_CTX *ctx, unsigned char *out, unsigned int olen, unsigned char *in, unsigned int ilen); long (*ctrl) (void); long (*callback_ctrl) (void); } COMP_METHOD; struct comp_ctx_st { COMP_METHOD *meth; unsigned long compress_in; unsigned long compress_out; unsigned long expand_in; unsigned long expand_out; CRYPTO_EX_DATA ex_data; }; COMP_CTX *COMP_CTX_new(COMP_METHOD *meth); void COMP_CTX_free(COMP_CTX *ctx); int COMP_compress_block(COMP_CTX *ctx, unsigned char *out, int olen, unsigned char *in, int ilen); int COMP_expand_block(COMP_CTX *ctx, unsigned char *out, int olen, unsigned char *in, int ilen); COMP_METHOD *COMP_rle(void); COMP_METHOD *COMP_zlib(void); void COMP_zlib_cleanup(void); void ERR_load_COMP_strings(void); #line 177 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/bio.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 63 "/usr/include/openssl/bio.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stdarg.h" #line 19 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stdarg.h" #line 27 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stdarg.h" #line 38 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stdarg.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stdarg.h" #line 68 "/usr/include/openssl/bio.h" #line 99 "/usr/include/openssl/bio.h" #line 127 "/usr/include/openssl/bio.h" #line 141 "/usr/include/openssl/bio.h" #line 155 "/usr/include/openssl/bio.h" #line 178 "/usr/include/openssl/bio.h" typedef struct bio_st BIO; void BIO_set_flags(BIO *b, int flags); int BIO_test_flags(const BIO *b, int flags); void BIO_clear_flags(BIO *b, int flags); #line 221 "/usr/include/openssl/bio.h" #line 258 "/usr/include/openssl/bio.h" long (*BIO_get_callback(const BIO *b)) (struct bio_st *, int, const char *, int, long, long); void BIO_set_callback(BIO *b, long (*callback) (struct bio_st *, int, const char *, int, long, long)); char *BIO_get_callback_arg(const BIO *b); void BIO_set_callback_arg(BIO *b, char *arg); const char *BIO_method_name(const BIO *b); int BIO_method_type(const BIO *b); typedef void bio_info_cb (struct bio_st *, int, const char *, int, long, long); typedef struct bio_method_st { int type; const char *name; int (*bwrite) (BIO *, const char *, int); int (*bread) (BIO *, char *, int); int (*bputs) (BIO *, const char *); int (*bgets) (BIO *, char *, int); long (*ctrl) (BIO *, int, long, void *); int (*create) (BIO *); int (*destroy) (BIO *); long (*callback_ctrl) (BIO *, int, bio_info_cb *); } BIO_METHOD; #line 309 "/usr/include/openssl/bio.h" struct bio_st { BIO_METHOD *method; long (*callback) (struct bio_st *, int, const char *, int, long, long); char *cb_arg; int init; int shutdown; int flags; int retry_reason; int num; void *ptr; struct bio_st *next_bio; struct bio_st *prev_bio; int references; unsigned long num_read; unsigned long num_write; CRYPTO_EX_DATA ex_data; }; typedef struct bio_f_buffer_ctx_struct { int ibuf_size; int obuf_size; char *ibuf; int ibuf_len; int ibuf_off; char *obuf; int obuf_len; int obuf_off; } BIO_F_BUFFER_CTX; #line 363 "/usr/include/openssl/bio.h" #line 404 "/usr/include/openssl/bio.h" #line 418 "/usr/include/openssl/bio.h" #line 431 "/usr/include/openssl/bio.h" #line 495 "/usr/include/openssl/bio.h" #line 511 "/usr/include/openssl/bio.h" #line 537 "/usr/include/openssl/bio.h" size_t BIO_ctrl_pending(BIO *b); size_t BIO_ctrl_wpending(BIO *b); size_t BIO_ctrl_get_write_guarantee(BIO *b); size_t BIO_ctrl_get_read_request(BIO *b); int BIO_ctrl_reset_read_request(BIO *b); #line 574 "/usr/include/openssl/bio.h" int BIO_set_ex_data(BIO *bio, int idx, void *data); void *BIO_get_ex_data(BIO *bio, int idx); int BIO_get_ex_new_index(long argl, void *argp, CRYPTO_EX_new *new_func, CRYPTO_EX_dup *dup_func, CRYPTO_EX_free *free_func); unsigned long BIO_number_read(BIO *bio); unsigned long BIO_number_written(BIO *bio); #line 594 "/usr/include/openssl/bio.h" BIO_METHOD *BIO_s_file(void); BIO *BIO_new_file(const char *filename, const char *mode); BIO *BIO_new_fp(FILE *stream, int close_flag); BIO *BIO_new(BIO_METHOD *type); int BIO_set(BIO *a, BIO_METHOD *type); int BIO_free(BIO *a); void BIO_vfree(BIO *a); int BIO_read(BIO *b, void *data, int len); int BIO_gets(BIO *bp, char *buf, int size); int BIO_write(BIO *b, const void *data, int len); int BIO_puts(BIO *bp, const char *buf); int BIO_indent(BIO *b, int indent, int max); long BIO_ctrl(BIO *bp, int cmd, long larg, void *parg); long BIO_callback_ctrl(BIO *b, int cmd, void (*fp) (struct bio_st *, int, const char *, int, long, long)); char *BIO_ptr_ctrl(BIO *bp, int cmd, long larg); long BIO_int_ctrl(BIO *bp, int cmd, long larg, int iarg); BIO *BIO_push(BIO *b, BIO *append); BIO *BIO_pop(BIO *b); void BIO_free_all(BIO *a); BIO *BIO_find_type(BIO *b, int bio_type); BIO *BIO_next(BIO *b); BIO *BIO_get_retry_BIO(BIO *bio, int *reason); int BIO_get_retry_reason(BIO *bio); BIO *BIO_dup_chain(BIO *in); int BIO_nread0(BIO *bio, char **buf); int BIO_nread(BIO *bio, char **buf, int num); int BIO_nwrite0(BIO *bio, char **buf); int BIO_nwrite(BIO *bio, char **buf, int num); long BIO_debug_callback(BIO *bio, int cmd, const char *argp, int argi, long argl, long ret); BIO_METHOD *BIO_s_mem(void); BIO *BIO_new_mem_buf(void *buf, int len); BIO_METHOD *BIO_s_socket(void); BIO_METHOD *BIO_s_connect(void); BIO_METHOD *BIO_s_accept(void); BIO_METHOD *BIO_s_fd(void); BIO_METHOD *BIO_s_log(void); BIO_METHOD *BIO_s_bio(void); BIO_METHOD *BIO_s_null(void); BIO_METHOD *BIO_f_null(void); BIO_METHOD *BIO_f_buffer(void); BIO_METHOD *BIO_f_nbio_test(void); BIO_METHOD *BIO_s_datagram(void); int BIO_sock_should_retry(int i); int BIO_sock_non_fatal_error(int error); int BIO_dgram_non_fatal_error(int error); int BIO_fd_should_retry(int i); int BIO_fd_non_fatal_error(int error); int BIO_dump_cb(int (*cb) (const void *data, size_t len, void *u), void *u, const char *s, int len); int BIO_dump_indent_cb(int (*cb) (const void *data, size_t len, void *u), void *u, const char *s, int len, int indent); int BIO_dump(BIO *b, const char *bytes, int len); int BIO_dump_indent(BIO *b, const char *bytes, int len, int indent); int BIO_dump_fp(FILE *fp, const char *s, int len); int BIO_dump_indent_fp(FILE *fp, const char *s, int len, int indent); struct hostent *BIO_gethostbyname(const char *name); int BIO_sock_error(int sock); int BIO_socket_ioctl(int fd, long type, void *arg); int BIO_socket_nbio(int fd, int mode); int BIO_get_port(const char *str, unsigned short *port_ptr); int BIO_get_host_ip(const char *str, unsigned char *ip); int BIO_get_accept_socket(char *host_port, int mode); int BIO_accept(int sock, char **ip_port); int BIO_sock_init(void); void BIO_sock_cleanup(void); int BIO_set_tcp_ndelay(int sock, int turn_on); BIO *BIO_new_socket(int sock, int close_flag); BIO *BIO_new_dgram(int fd, int close_flag); BIO *BIO_new_fd(int fd, int close_flag); BIO *BIO_new_connect(char *host_port); BIO *BIO_new_accept(char *host_port); int BIO_new_bio_pair(BIO **bio1, size_t writebuf1, BIO **bio2, size_t writebuf2); void BIO_copy_next_retry(BIO *b); int BIO_printf(BIO *bio, const char *format, ...) ; int BIO_vprintf(BIO *bio, const char *format, va_list args) ; int BIO_snprintf(char *buf, size_t n, const char *format, ...) ; int BIO_vsnprintf(char *buf, size_t n, const char *format, va_list args) ; void ERR_load_BIO_strings(void); #line 776 "/usr/include/openssl/bio.h" #line 807 "/usr/include/openssl/bio.h" #line 180 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/x509.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 68 "/usr/include/openssl/x509.h" #line 1 "/usr/include/openssl/symhacks.h" #line 436 "/usr/include/openssl/symhacks.h" #line 69 "/usr/include/openssl/x509.h" #line 1 "/usr/include/openssl/buffer.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef long ptrdiff_t; #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 69 "/usr/include/openssl/buffer.h" struct buf_mem_st { int length; char *data; int max; }; BUF_MEM *BUF_MEM_new(void); void BUF_MEM_free(BUF_MEM *a); int BUF_MEM_grow(BUF_MEM *str, int len); int BUF_MEM_grow_clean(BUF_MEM *str, int len); char *BUF_strdup(const char *str); char *BUF_strndup(const char *str, size_t siz); void *BUF_memdup(const void *data, size_t siz); size_t BUF_strlcpy(char *dst, const char *src, size_t siz); size_t BUF_strlcat(char *dst, const char *src, size_t siz); void ERR_load_BUF_strings(void); #line 111 "/usr/include/openssl/buffer.h" #line 71 "/usr/include/openssl/x509.h" #line 1 "/usr/include/openssl/evp.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 67 "/usr/include/openssl/evp.h" #line 1 "/usr/include/openssl/symhacks.h" #line 436 "/usr/include/openssl/symhacks.h" #line 73 "/usr/include/openssl/evp.h" #line 1 "/usr/include/openssl/objects.h" #line 1 "/usr/include/openssl/obj_mac.h" #line 66 "/usr/include/openssl/objects.h" #line 963 "/usr/include/openssl/objects.h" #line 1 "/usr/include/openssl/asn1.h" #line 1 "/usr/include/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 30 "/usr/include/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 40 "/usr/include/time.h" #line 1 "/usr/include/bits/time.h" #line 43 "/usr/include/bits/time.h" #line 44 "/usr/include/time.h" typedef __clock_t clock_t; #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" #line 129 "/usr/include/time.h" struct tm { int tm_sec; int tm_min; int tm_hour; int tm_mday; int tm_mon; int tm_year; int tm_wday; int tm_yday; int tm_isdst; long int tm_gmtoff; const char *tm_zone; }; struct itimerspec { struct timespec it_interval; struct timespec it_value; }; struct sigevent; #line 179 "/usr/include/time.h" extern clock_t clock (void) ; extern time_t time (time_t *__timer) ; extern double difftime (time_t __time1, time_t __time0) ; extern time_t mktime (struct tm *__tp) ; extern size_t strftime (char * __s, size_t __maxsize, const char * __format, const struct tm * __tp) ; #line 212 "/usr/include/time.h" #line 227 "/usr/include/time.h" extern struct tm *gmtime (const time_t *__timer) ; extern struct tm *localtime (const time_t *__timer) ; extern struct tm *gmtime_r (const time_t * __timer, struct tm * __tp) ; extern struct tm *localtime_r (const time_t * __timer, struct tm * __tp) ; extern char *asctime (const struct tm *__tp) ; extern char *ctime (const time_t *__timer) ; extern char *asctime_r (const struct tm * __tp, char * __buf) ; extern char *ctime_r (const time_t * __timer, char * __buf) ; extern char *__tzname[2]; extern int __daylight; extern long int __timezone; extern char *tzname[2]; extern void tzset (void) ; extern int daylight; extern long int timezone; extern int stime (const time_t *__when) ; extern time_t timegm (struct tm *__tp) ; extern time_t timelocal (struct tm *__tp) ; extern int dysize (int __year) ; extern int nanosleep (const struct timespec *__requested_time, struct timespec *__remaining); extern int clock_getres (clockid_t __clock_id, struct timespec *__res) ; extern int clock_gettime (clockid_t __clock_id, struct timespec *__tp) ; extern int clock_settime (clockid_t __clock_id, const struct timespec *__tp) ; extern int clock_nanosleep (clockid_t __clock_id, int __flags, const struct timespec *__req, struct timespec *__rem); extern int clock_getcpuclockid (pid_t __pid, clockid_t *__clock_id) ; extern int timer_create (clockid_t __clock_id, struct sigevent * __evp, timer_t * __timerid) ; extern int timer_delete (timer_t __timerid) ; extern int timer_settime (timer_t __timerid, int __flags, const struct itimerspec * __value, struct itimerspec * __ovalue) ; extern int timer_gettime (timer_t __timerid, struct itimerspec *__value) ; extern int timer_getoverrun (timer_t __timerid) ; #line 400 "/usr/include/time.h" #line 415 "/usr/include/time.h" #line 63 "/usr/include/openssl/asn1.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 64 "/usr/include/openssl/asn1.h" #line 1 "/usr/include/openssl/symhacks.h" #line 436 "/usr/include/openssl/symhacks.h" #line 71 "/usr/include/openssl/asn1.h" #line 1 "/usr/include/openssl/bn.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 76 "/usr/include/openssl/bn.h" #line 119 "/usr/include/openssl/bn.h" #line 143 "/usr/include/openssl/bn.h" #line 169 "/usr/include/openssl/bn.h" #line 200 "/usr/include/openssl/bn.h" #line 223 "/usr/include/openssl/bn.h" #line 246 "/usr/include/openssl/bn.h" #line 268 "/usr/include/openssl/bn.h" #line 288 "/usr/include/openssl/bn.h" #line 299 "/usr/include/openssl/bn.h" struct bignum_st { unsigned long *d; int top; int dmax; int neg; int flags; }; struct bn_mont_ctx_st { int ri; BIGNUM RR; BIGNUM N; BIGNUM Ni; unsigned long n0; int flags; }; struct bn_recp_ctx_st { BIGNUM N; BIGNUM Nr; int num_bits; int shift; int flags; }; struct bn_gencb_st { unsigned int ver; void *arg; union { void (*cb_1) (int, int, void *); int (*cb_2) (int, int, BN_GENCB *); } cb; }; int BN_GENCB_call(BN_GENCB *cb, int a, int b); #line 387 "/usr/include/openssl/bn.h" #line 397 "/usr/include/openssl/bn.h" #line 410 "/usr/include/openssl/bn.h" const BIGNUM *BN_value_one(void); char *BN_options(void); BN_CTX *BN_CTX_new(void); void BN_CTX_init(BN_CTX *c); void BN_CTX_free(BN_CTX *c); void BN_CTX_start(BN_CTX *ctx); BIGNUM *BN_CTX_get(BN_CTX *ctx); void BN_CTX_end(BN_CTX *ctx); int BN_rand(BIGNUM *rnd, int bits, int top, int bottom); int BN_pseudo_rand(BIGNUM *rnd, int bits, int top, int bottom); int BN_rand_range(BIGNUM *rnd, const BIGNUM *range); int BN_pseudo_rand_range(BIGNUM *rnd, const BIGNUM *range); int BN_num_bits(const BIGNUM *a); int BN_num_bits_word(unsigned long); BIGNUM *BN_new(void); void BN_init(BIGNUM *); void BN_clear_free(BIGNUM *a); BIGNUM *BN_copy(BIGNUM *a, const BIGNUM *b); void BN_swap(BIGNUM *a, BIGNUM *b); BIGNUM *BN_bin2bn(const unsigned char *s, int len, BIGNUM *ret); int BN_bn2bin(const BIGNUM *a, unsigned char *to); BIGNUM *BN_mpi2bn(const unsigned char *s, int len, BIGNUM *ret); int BN_bn2mpi(const BIGNUM *a, unsigned char *to); int BN_sub(BIGNUM *r, const BIGNUM *a, const BIGNUM *b); int BN_usub(BIGNUM *r, const BIGNUM *a, const BIGNUM *b); int BN_uadd(BIGNUM *r, const BIGNUM *a, const BIGNUM *b); int BN_add(BIGNUM *r, const BIGNUM *a, const BIGNUM *b); int BN_mul(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, BN_CTX *ctx); int BN_sqr(BIGNUM *r, const BIGNUM *a, BN_CTX *ctx); void BN_set_negative(BIGNUM *b, int n); int BN_div(BIGNUM *dv, BIGNUM *rem, const BIGNUM *m, const BIGNUM *d, BN_CTX *ctx); int BN_nnmod(BIGNUM *r, const BIGNUM *m, const BIGNUM *d, BN_CTX *ctx); int BN_mod_add(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, const BIGNUM *m, BN_CTX *ctx); int BN_mod_add_quick(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, const BIGNUM *m); int BN_mod_sub(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, const BIGNUM *m, BN_CTX *ctx); int BN_mod_sub_quick(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, const BIGNUM *m); int BN_mod_mul(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, const BIGNUM *m, BN_CTX *ctx); int BN_mod_sqr(BIGNUM *r, const BIGNUM *a, const BIGNUM *m, BN_CTX *ctx); int BN_mod_lshift1(BIGNUM *r, const BIGNUM *a, const BIGNUM *m, BN_CTX *ctx); int BN_mod_lshift1_quick(BIGNUM *r, const BIGNUM *a, const BIGNUM *m); int BN_mod_lshift(BIGNUM *r, const BIGNUM *a, int n, const BIGNUM *m, BN_CTX *ctx); int BN_mod_lshift_quick(BIGNUM *r, const BIGNUM *a, int n, const BIGNUM *m); unsigned long BN_mod_word(const BIGNUM *a, unsigned long w); unsigned long BN_div_word(BIGNUM *a, unsigned long w); int BN_mul_word(BIGNUM *a, unsigned long w); int BN_add_word(BIGNUM *a, unsigned long w); int BN_sub_word(BIGNUM *a, unsigned long w); int BN_set_word(BIGNUM *a, unsigned long w); unsigned long BN_get_word(const BIGNUM *a); int BN_cmp(const BIGNUM *a, const BIGNUM *b); void BN_free(BIGNUM *a); int BN_is_bit_set(const BIGNUM *a, int n); int BN_lshift(BIGNUM *r, const BIGNUM *a, int n); int BN_lshift1(BIGNUM *r, const BIGNUM *a); int BN_exp(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, BN_CTX *ctx); int BN_mod_exp(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, const BIGNUM *m, BN_CTX *ctx); int BN_mod_exp_mont(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, const BIGNUM *m, BN_CTX *ctx, BN_MONT_CTX *m_ctx); int BN_mod_exp_mont_consttime(BIGNUM *rr, const BIGNUM *a, const BIGNUM *p, const BIGNUM *m, BN_CTX *ctx, BN_MONT_CTX *in_mont); int BN_mod_exp_mont_word(BIGNUM *r, unsigned long a, const BIGNUM *p, const BIGNUM *m, BN_CTX *ctx, BN_MONT_CTX *m_ctx); int BN_mod_exp2_mont(BIGNUM *r, const BIGNUM *a1, const BIGNUM *p1, const BIGNUM *a2, const BIGNUM *p2, const BIGNUM *m, BN_CTX *ctx, BN_MONT_CTX *m_ctx); int BN_mod_exp_simple(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, const BIGNUM *m, BN_CTX *ctx); int BN_mask_bits(BIGNUM *a, int n); int BN_print_fp(FILE *fp, const BIGNUM *a); int BN_print(BIO *fp, const BIGNUM *a); int BN_reciprocal(BIGNUM *r, const BIGNUM *m, int len, BN_CTX *ctx); int BN_rshift(BIGNUM *r, const BIGNUM *a, int n); int BN_rshift1(BIGNUM *r, const BIGNUM *a); void BN_clear(BIGNUM *a); BIGNUM *BN_dup(const BIGNUM *a); int BN_ucmp(const BIGNUM *a, const BIGNUM *b); int BN_set_bit(BIGNUM *a, int n); int BN_clear_bit(BIGNUM *a, int n); char *BN_bn2hex(const BIGNUM *a); char *BN_bn2dec(const BIGNUM *a); int BN_hex2bn(BIGNUM **a, const char *str); int BN_dec2bn(BIGNUM **a, const char *str); int BN_gcd(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, BN_CTX *ctx); int BN_kronecker(const BIGNUM *a, const BIGNUM *b, BN_CTX *ctx); BIGNUM *BN_mod_inverse(BIGNUM *ret, const BIGNUM *a, const BIGNUM *n, BN_CTX *ctx); BIGNUM *BN_mod_sqrt(BIGNUM *ret, const BIGNUM *a, const BIGNUM *n, BN_CTX *ctx); void BN_consttime_swap(unsigned long swap, BIGNUM *a, BIGNUM *b, int nwords); BIGNUM *BN_generate_prime(BIGNUM *ret, int bits, int safe, const BIGNUM *add, const BIGNUM *rem, void (*callback) (int, int, void *), void *cb_arg); int BN_is_prime(const BIGNUM *p, int nchecks, void (*callback) (int, int, void *), BN_CTX *ctx, void *cb_arg); int BN_is_prime_fasttest(const BIGNUM *p, int nchecks, void (*callback) (int, int, void *), BN_CTX *ctx, void *cb_arg, int do_trial_division); int BN_generate_prime_ex(BIGNUM *ret, int bits, int safe, const BIGNUM *add, const BIGNUM *rem, BN_GENCB *cb); int BN_is_prime_ex(const BIGNUM *p, int nchecks, BN_CTX *ctx, BN_GENCB *cb); int BN_is_prime_fasttest_ex(const BIGNUM *p, int nchecks, BN_CTX *ctx, int do_trial_division, BN_GENCB *cb); int BN_X931_generate_Xpq(BIGNUM *Xp, BIGNUM *Xq, int nbits, BN_CTX *ctx); int BN_X931_derive_prime_ex(BIGNUM *p, BIGNUM *p1, BIGNUM *p2, const BIGNUM *Xp, const BIGNUM *Xp1, const BIGNUM *Xp2, const BIGNUM *e, BN_CTX *ctx, BN_GENCB *cb); int BN_X931_generate_prime_ex(BIGNUM *p, BIGNUM *p1, BIGNUM *p2, BIGNUM *Xp1, BIGNUM *Xp2, const BIGNUM *Xp, const BIGNUM *e, BN_CTX *ctx, BN_GENCB *cb); BN_MONT_CTX *BN_MONT_CTX_new(void); void BN_MONT_CTX_init(BN_MONT_CTX *ctx); int BN_mod_mul_montgomery(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, BN_MONT_CTX *mont, BN_CTX *ctx); int BN_from_montgomery(BIGNUM *r, const BIGNUM *a, BN_MONT_CTX *mont, BN_CTX *ctx); void BN_MONT_CTX_free(BN_MONT_CTX *mont); int BN_MONT_CTX_set(BN_MONT_CTX *mont, const BIGNUM *mod, BN_CTX *ctx); BN_MONT_CTX *BN_MONT_CTX_copy(BN_MONT_CTX *to, BN_MONT_CTX *from); BN_MONT_CTX *BN_MONT_CTX_set_locked(BN_MONT_CTX **pmont, int lock, const BIGNUM *mod, BN_CTX *ctx); BN_BLINDING *BN_BLINDING_new(const BIGNUM *A, const BIGNUM *Ai, BIGNUM *mod); void BN_BLINDING_free(BN_BLINDING *b); int BN_BLINDING_update(BN_BLINDING *b, BN_CTX *ctx); int BN_BLINDING_convert(BIGNUM *n, BN_BLINDING *b, BN_CTX *ctx); int BN_BLINDING_invert(BIGNUM *n, BN_BLINDING *b, BN_CTX *ctx); int BN_BLINDING_convert_ex(BIGNUM *n, BIGNUM *r, BN_BLINDING *b, BN_CTX *); int BN_BLINDING_invert_ex(BIGNUM *n, const BIGNUM *r, BN_BLINDING *b, BN_CTX *); unsigned long BN_BLINDING_get_thread_id(const BN_BLINDING *); void BN_BLINDING_set_thread_id(BN_BLINDING *, unsigned long); unsigned long BN_BLINDING_get_flags(const BN_BLINDING *); void BN_BLINDING_set_flags(BN_BLINDING *, unsigned long); BN_BLINDING *BN_BLINDING_create_param(BN_BLINDING *b, const BIGNUM *e, BIGNUM *m, BN_CTX *ctx, int (*bn_mod_exp) (BIGNUM *r, const BIGNUM *a, const BIGNUM *p, const BIGNUM *m, BN_CTX *ctx, BN_MONT_CTX *m_ctx), BN_MONT_CTX *m_ctx); void BN_set_params(int mul, int high, int low, int mont); int BN_get_params(int which); void BN_RECP_CTX_init(BN_RECP_CTX *recp); BN_RECP_CTX *BN_RECP_CTX_new(void); void BN_RECP_CTX_free(BN_RECP_CTX *recp); int BN_RECP_CTX_set(BN_RECP_CTX *recp, const BIGNUM *rdiv, BN_CTX *ctx); int BN_mod_mul_reciprocal(BIGNUM *r, const BIGNUM *x, const BIGNUM *y, BN_RECP_CTX *recp, BN_CTX *ctx); int BN_mod_exp_recp(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, const BIGNUM *m, BN_CTX *ctx); int BN_div_recp(BIGNUM *dv, BIGNUM *rem, const BIGNUM *m, BN_RECP_CTX *recp, BN_CTX *ctx); int BN_GF2m_add(BIGNUM *r, const BIGNUM *a, const BIGNUM *b); int BN_GF2m_mod(BIGNUM *r, const BIGNUM *a, const BIGNUM *p); int BN_GF2m_mod_mul(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, const BIGNUM *p, BN_CTX *ctx); int BN_GF2m_mod_sqr(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, BN_CTX *ctx); int BN_GF2m_mod_inv(BIGNUM *r, const BIGNUM *b, const BIGNUM *p, BN_CTX *ctx); int BN_GF2m_mod_div(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, const BIGNUM *p, BN_CTX *ctx); int BN_GF2m_mod_exp(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, const BIGNUM *p, BN_CTX *ctx); int BN_GF2m_mod_sqrt(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, BN_CTX *ctx); int BN_GF2m_mod_solve_quad(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, BN_CTX *ctx); int BN_GF2m_mod_arr(BIGNUM *r, const BIGNUM *a, const unsigned int p[]); int BN_GF2m_mod_mul_arr(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, const unsigned int p[], BN_CTX *ctx); int BN_GF2m_mod_sqr_arr(BIGNUM *r, const BIGNUM *a, const unsigned int p[], BN_CTX *ctx); int BN_GF2m_mod_inv_arr(BIGNUM *r, const BIGNUM *b, const unsigned int p[], BN_CTX *ctx); int BN_GF2m_mod_div_arr(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, const unsigned int p[], BN_CTX *ctx); int BN_GF2m_mod_exp_arr(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, const unsigned int p[], BN_CTX *ctx); int BN_GF2m_mod_sqrt_arr(BIGNUM *r, const BIGNUM *a, const unsigned int p[], BN_CTX *ctx); int BN_GF2m_mod_solve_quad_arr(BIGNUM *r, const BIGNUM *a, const unsigned int p[], BN_CTX *ctx); int BN_GF2m_poly2arr(const BIGNUM *a, unsigned int p[], int max); int BN_GF2m_arr2poly(const unsigned int p[], BIGNUM *a); int BN_nist_mod_192(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, BN_CTX *ctx); int BN_nist_mod_224(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, BN_CTX *ctx); int BN_nist_mod_256(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, BN_CTX *ctx); int BN_nist_mod_384(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, BN_CTX *ctx); int BN_nist_mod_521(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, BN_CTX *ctx); const BIGNUM *BN_get0_nist_prime_192(void); const BIGNUM *BN_get0_nist_prime_224(void); const BIGNUM *BN_get0_nist_prime_256(void); const BIGNUM *BN_get0_nist_prime_384(void); const BIGNUM *BN_get0_nist_prime_521(void); BIGNUM *bn_expand2(BIGNUM *a, int words); BIGNUM *bn_dup_expand(const BIGNUM *a, int words); #line 796 "/usr/include/openssl/bn.h" #line 815 "/usr/include/openssl/bn.h" unsigned long bn_mul_add_words(unsigned long *rp, const unsigned long *ap, int num, unsigned long w); unsigned long bn_mul_words(unsigned long *rp, const unsigned long *ap, int num, unsigned long w); void bn_sqr_words(unsigned long *rp, const unsigned long *ap, int num); unsigned long bn_div_words(unsigned long h, unsigned long l, unsigned long d); unsigned long bn_add_words(unsigned long *rp, const unsigned long *ap, const unsigned long *bp, int num); unsigned long bn_sub_words(unsigned long *rp, const unsigned long *ap, const unsigned long *bp, int num); BIGNUM *get_rfc2409_prime_768(BIGNUM *bn); BIGNUM *get_rfc2409_prime_1024(BIGNUM *bn); BIGNUM *get_rfc3526_prime_1536(BIGNUM *bn); BIGNUM *get_rfc3526_prime_2048(BIGNUM *bn); BIGNUM *get_rfc3526_prime_3072(BIGNUM *bn); BIGNUM *get_rfc3526_prime_4096(BIGNUM *bn); BIGNUM *get_rfc3526_prime_6144(BIGNUM *bn); BIGNUM *get_rfc3526_prime_8192(BIGNUM *bn); int BN_bntest_rand(BIGNUM *rnd, int bits, int top, int bottom); void ERR_load_BN_strings(void); #line 892 "/usr/include/openssl/bn.h" #line 913 "/usr/include/openssl/bn.h" #line 75 "/usr/include/openssl/asn1.h" #line 132 "/usr/include/openssl/asn1.h" #line 152 "/usr/include/openssl/asn1.h" #line 161 "/usr/include/openssl/asn1.h" struct X509_algor_st; typedef struct asn1_ctx_st { unsigned char *p; int eos; int error; int inf; int tag; int xclass; long slen; unsigned char *max; unsigned char *q; unsigned char **pp; int line; } ASN1_CTX; typedef struct asn1_const_ctx_st { const unsigned char *p; int eos; int error; int inf; int tag; int xclass; long slen; const unsigned char *max; const unsigned char *q; const unsigned char **pp; int line; } ASN1_const_CTX; typedef struct asn1_object_st { const char *sn, *ln; int nid; int length; unsigned char *data; int flags; } ASN1_OBJECT; typedef struct asn1_string_st { int length; int type; unsigned char *data; long flags; } ASN1_STRING; typedef struct ASN1_ENCODING_st { unsigned char *enc; long len; int modified; } ASN1_ENCODING; typedef struct asn1_string_table_st { int nid; long minsize; long maxsize; unsigned long mask; unsigned long flags; } ASN1_STRING_TABLE; #line 287 "/usr/include/openssl/asn1.h" typedef struct ASN1_TEMPLATE_st ASN1_TEMPLATE; typedef struct ASN1_ITEM_st ASN1_ITEM; typedef struct ASN1_TLC_st ASN1_TLC; typedef struct ASN1_VALUE_st ASN1_VALUE; #line 349 "/usr/include/openssl/asn1.h" typedef void *d2i_of_void(void * *,const unsigned char * *,long); typedef int i2d_of_void(void *,unsigned char * *); typedef const ASN1_ITEM ASN1_ITEM_EXP; #line 430 "/usr/include/openssl/asn1.h" #line 509 "/usr/include/openssl/asn1.h" typedef struct asn1_type_st { int type; union { char *ptr; ASN1_BOOLEAN boolean; ASN1_STRING *asn1_string; ASN1_OBJECT *object; ASN1_INTEGER *integer; ASN1_ENUMERATED *enumerated; ASN1_BIT_STRING *bit_string; ASN1_OCTET_STRING *octet_string; ASN1_PRINTABLESTRING *printablestring; ASN1_T61STRING *t61string; ASN1_IA5STRING *ia5string; ASN1_GENERALSTRING *generalstring; ASN1_BMPSTRING *bmpstring; ASN1_UNIVERSALSTRING *universalstring; ASN1_UTCTIME *utctime; ASN1_GENERALIZEDTIME *generalizedtime; ASN1_VISIBLESTRING *visiblestring; ASN1_UTF8STRING *utf8string; ASN1_STRING *set; ASN1_STRING *sequence; ASN1_VALUE *asn1_value; } value; } ASN1_TYPE; typedef struct asn1_method_st { i2d_of_void *i2d; d2i_of_void *d2i; void *(*create) (void); void (*destroy) (void *); } ASN1_METHOD; typedef struct asn1_header_st { ASN1_OCTET_STRING *header; void *data; ASN1_METHOD *meth; } ASN1_HEADER; typedef struct BIT_STRING_BITNAME_st { int bitnum; const char *lname; const char *sname; } BIT_STRING_BITNAME; #line 584 "/usr/include/openssl/asn1.h" #line 591 "/usr/include/openssl/asn1.h" #line 598 "/usr/include/openssl/asn1.h" #line 611 "/usr/include/openssl/asn1.h" #line 627 "/usr/include/openssl/asn1.h" #line 634 "/usr/include/openssl/asn1.h" #line 648 "/usr/include/openssl/asn1.h" #line 656 "/usr/include/openssl/asn1.h" #line 664 "/usr/include/openssl/asn1.h" #line 674 "/usr/include/openssl/asn1.h" #line 684 "/usr/include/openssl/asn1.h" #line 696 "/usr/include/openssl/asn1.h" #line 722 "/usr/include/openssl/asn1.h" #line 732 "/usr/include/openssl/asn1.h" #line 742 "/usr/include/openssl/asn1.h" #line 752 "/usr/include/openssl/asn1.h" #line 762 "/usr/include/openssl/asn1.h" ASN1_TYPE *ASN1_TYPE_new(void); void ASN1_TYPE_free(ASN1_TYPE *a); ASN1_TYPE *d2i_ASN1_TYPE(ASN1_TYPE * *a, const unsigned char * *in, long len); int i2d_ASN1_TYPE(ASN1_TYPE *a, unsigned char * *out); extern const ASN1_ITEM ASN1_ANY_it; int ASN1_TYPE_get(ASN1_TYPE *a); void ASN1_TYPE_set(ASN1_TYPE *a, int type, void *value); int ASN1_TYPE_set1(ASN1_TYPE *a, int type, const void *value); int ASN1_TYPE_cmp(const ASN1_TYPE *a, const ASN1_TYPE *b); ASN1_OBJECT *ASN1_OBJECT_new(void); void ASN1_OBJECT_free(ASN1_OBJECT *a); int i2d_ASN1_OBJECT(ASN1_OBJECT *a, unsigned char **pp); ASN1_OBJECT *c2i_ASN1_OBJECT(ASN1_OBJECT **a, const unsigned char **pp, long length); ASN1_OBJECT *d2i_ASN1_OBJECT(ASN1_OBJECT **a, const unsigned char **pp, long length); extern const ASN1_ITEM ASN1_OBJECT_it; ASN1_STRING *ASN1_STRING_new(void); void ASN1_STRING_free(ASN1_STRING *a); ASN1_STRING *ASN1_STRING_dup(ASN1_STRING *a); ASN1_STRING *ASN1_STRING_type_new(int type); int ASN1_STRING_cmp(ASN1_STRING *a, ASN1_STRING *b); int ASN1_STRING_set(ASN1_STRING *str, const void *data, int len); void ASN1_STRING_set0(ASN1_STRING *str, void *data, int len); int ASN1_STRING_length(ASN1_STRING *x); void ASN1_STRING_length_set(ASN1_STRING *x, int n); int ASN1_STRING_type(ASN1_STRING *x); unsigned char *ASN1_STRING_data(ASN1_STRING *x); ASN1_BIT_STRING *ASN1_BIT_STRING_new(void); void ASN1_BIT_STRING_free(ASN1_BIT_STRING *a); ASN1_BIT_STRING *d2i_ASN1_BIT_STRING(ASN1_BIT_STRING * *a, const unsigned char * *in, long len); int i2d_ASN1_BIT_STRING(ASN1_BIT_STRING *a, unsigned char * *out); extern const ASN1_ITEM ASN1_BIT_STRING_it; int i2c_ASN1_BIT_STRING(ASN1_BIT_STRING *a, unsigned char **pp); ASN1_BIT_STRING *c2i_ASN1_BIT_STRING(ASN1_BIT_STRING **a, const unsigned char **pp, long length); int ASN1_BIT_STRING_set(ASN1_BIT_STRING *a, unsigned char *d, int length); int ASN1_BIT_STRING_set_bit(ASN1_BIT_STRING *a, int n, int value); int ASN1_BIT_STRING_get_bit(ASN1_BIT_STRING *a, int n); int ASN1_BIT_STRING_name_print(BIO *out, ASN1_BIT_STRING *bs, BIT_STRING_BITNAME *tbl, int indent); int ASN1_BIT_STRING_num_asc(char *name, BIT_STRING_BITNAME *tbl); int ASN1_BIT_STRING_set_asc(ASN1_BIT_STRING *bs, char *name, int value, BIT_STRING_BITNAME *tbl); int i2d_ASN1_BOOLEAN(int a, unsigned char **pp); int d2i_ASN1_BOOLEAN(int *a, const unsigned char **pp, long length); ASN1_INTEGER *ASN1_INTEGER_new(void); void ASN1_INTEGER_free(ASN1_INTEGER *a); ASN1_INTEGER *d2i_ASN1_INTEGER(ASN1_INTEGER * *a, const unsigned char * *in, long len); int i2d_ASN1_INTEGER(ASN1_INTEGER *a, unsigned char * *out); extern const ASN1_ITEM ASN1_INTEGER_it; int i2c_ASN1_INTEGER(ASN1_INTEGER *a, unsigned char **pp); ASN1_INTEGER *c2i_ASN1_INTEGER(ASN1_INTEGER **a, const unsigned char **pp, long length); ASN1_INTEGER *d2i_ASN1_UINTEGER(ASN1_INTEGER **a, const unsigned char **pp, long length); ASN1_INTEGER *ASN1_INTEGER_dup(ASN1_INTEGER *x); int ASN1_INTEGER_cmp(ASN1_INTEGER *x, ASN1_INTEGER *y); ASN1_ENUMERATED *ASN1_ENUMERATED_new(void); void ASN1_ENUMERATED_free(ASN1_ENUMERATED *a); ASN1_ENUMERATED *d2i_ASN1_ENUMERATED(ASN1_ENUMERATED * *a, const unsigned char * *in, long len); int i2d_ASN1_ENUMERATED(ASN1_ENUMERATED *a, unsigned char * *out); extern const ASN1_ITEM ASN1_ENUMERATED_it; int ASN1_UTCTIME_check(ASN1_UTCTIME *a); ASN1_UTCTIME *ASN1_UTCTIME_set(ASN1_UTCTIME *s, time_t t); int ASN1_UTCTIME_set_string(ASN1_UTCTIME *s, const char *str); int ASN1_UTCTIME_cmp_time_t(const ASN1_UTCTIME *s, time_t t); int ASN1_GENERALIZEDTIME_check(ASN1_GENERALIZEDTIME *a); ASN1_GENERALIZEDTIME *ASN1_GENERALIZEDTIME_set(ASN1_GENERALIZEDTIME *s, time_t t); int ASN1_GENERALIZEDTIME_set_string(ASN1_GENERALIZEDTIME *s, const char *str); ASN1_OCTET_STRING *ASN1_OCTET_STRING_new(void); void ASN1_OCTET_STRING_free(ASN1_OCTET_STRING *a); ASN1_OCTET_STRING *d2i_ASN1_OCTET_STRING(ASN1_OCTET_STRING * *a, const unsigned char * *in, long len); int i2d_ASN1_OCTET_STRING(ASN1_OCTET_STRING *a, unsigned char * *out); extern const ASN1_ITEM ASN1_OCTET_STRING_it; ASN1_OCTET_STRING *ASN1_OCTET_STRING_dup(ASN1_OCTET_STRING *a); int ASN1_OCTET_STRING_cmp(ASN1_OCTET_STRING *a, ASN1_OCTET_STRING *b); int ASN1_OCTET_STRING_set(ASN1_OCTET_STRING *str, const unsigned char *data, int len); ASN1_VISIBLESTRING *ASN1_VISIBLESTRING_new(void); void ASN1_VISIBLESTRING_free(ASN1_VISIBLESTRING *a); ASN1_VISIBLESTRING *d2i_ASN1_VISIBLESTRING(ASN1_VISIBLESTRING * *a, const unsigned char * *in, long len); int i2d_ASN1_VISIBLESTRING(ASN1_VISIBLESTRING *a, unsigned char * *out); extern const ASN1_ITEM ASN1_VISIBLESTRING_it; ASN1_UNIVERSALSTRING *ASN1_UNIVERSALSTRING_new(void); void ASN1_UNIVERSALSTRING_free(ASN1_UNIVERSALSTRING *a); ASN1_UNIVERSALSTRING *d2i_ASN1_UNIVERSALSTRING(ASN1_UNIVERSALSTRING * *a, const unsigned char * *in, long len); int i2d_ASN1_UNIVERSALSTRING(ASN1_UNIVERSALSTRING *a, unsigned char * *out); extern const ASN1_ITEM ASN1_UNIVERSALSTRING_it; ASN1_UTF8STRING *ASN1_UTF8STRING_new(void); void ASN1_UTF8STRING_free(ASN1_UTF8STRING *a); ASN1_UTF8STRING *d2i_ASN1_UTF8STRING(ASN1_UTF8STRING * *a, const unsigned char * *in, long len); int i2d_ASN1_UTF8STRING(ASN1_UTF8STRING *a, unsigned char * *out); extern const ASN1_ITEM ASN1_UTF8STRING_it; ASN1_NULL *ASN1_NULL_new(void); void ASN1_NULL_free(ASN1_NULL *a); ASN1_NULL *d2i_ASN1_NULL(ASN1_NULL * *a, const unsigned char * *in, long len); int i2d_ASN1_NULL(ASN1_NULL *a, unsigned char * *out); extern const ASN1_ITEM ASN1_NULL_it; ASN1_BMPSTRING *ASN1_BMPSTRING_new(void); void ASN1_BMPSTRING_free(ASN1_BMPSTRING *a); ASN1_BMPSTRING *d2i_ASN1_BMPSTRING(ASN1_BMPSTRING * *a, const unsigned char * *in, long len); int i2d_ASN1_BMPSTRING(ASN1_BMPSTRING *a, unsigned char * *out); extern const ASN1_ITEM ASN1_BMPSTRING_it; int UTF8_getc(const unsigned char *str, int len, unsigned long *val); int UTF8_putc(unsigned char *str, int len, unsigned long value); ASN1_STRING *ASN1_PRINTABLE_new(void); void ASN1_PRINTABLE_free(ASN1_STRING *a); ASN1_STRING *d2i_ASN1_PRINTABLE(ASN1_STRING * *a, const unsigned char * *in, long len); int i2d_ASN1_PRINTABLE(ASN1_STRING *a, unsigned char * *out); extern const ASN1_ITEM ASN1_PRINTABLE_it; ASN1_STRING *DIRECTORYSTRING_new(void); void DIRECTORYSTRING_free(ASN1_STRING *a); ASN1_STRING *d2i_DIRECTORYSTRING(ASN1_STRING * *a, const unsigned char * *in, long len); int i2d_DIRECTORYSTRING(ASN1_STRING *a, unsigned char * *out); extern const ASN1_ITEM DIRECTORYSTRING_it; ASN1_STRING *DISPLAYTEXT_new(void); void DISPLAYTEXT_free(ASN1_STRING *a); ASN1_STRING *d2i_DISPLAYTEXT(ASN1_STRING * *a, const unsigned char * *in, long len); int i2d_DISPLAYTEXT(ASN1_STRING *a, unsigned char * *out); extern const ASN1_ITEM DISPLAYTEXT_it; ASN1_PRINTABLESTRING *ASN1_PRINTABLESTRING_new(void); void ASN1_PRINTABLESTRING_free(ASN1_PRINTABLESTRING *a); ASN1_PRINTABLESTRING *d2i_ASN1_PRINTABLESTRING(ASN1_PRINTABLESTRING * *a, const unsigned char * *in, long len); int i2d_ASN1_PRINTABLESTRING(ASN1_PRINTABLESTRING *a, unsigned char * *out); extern const ASN1_ITEM ASN1_PRINTABLESTRING_it; ASN1_T61STRING *ASN1_T61STRING_new(void); void ASN1_T61STRING_free(ASN1_T61STRING *a); ASN1_T61STRING *d2i_ASN1_T61STRING(ASN1_T61STRING * *a, const unsigned char * *in, long len); int i2d_ASN1_T61STRING(ASN1_T61STRING *a, unsigned char * *out); extern const ASN1_ITEM ASN1_T61STRING_it; ASN1_IA5STRING *ASN1_IA5STRING_new(void); void ASN1_IA5STRING_free(ASN1_IA5STRING *a); ASN1_IA5STRING *d2i_ASN1_IA5STRING(ASN1_IA5STRING * *a, const unsigned char * *in, long len); int i2d_ASN1_IA5STRING(ASN1_IA5STRING *a, unsigned char * *out); extern const ASN1_ITEM ASN1_IA5STRING_it; ASN1_GENERALSTRING *ASN1_GENERALSTRING_new(void); void ASN1_GENERALSTRING_free(ASN1_GENERALSTRING *a); ASN1_GENERALSTRING *d2i_ASN1_GENERALSTRING(ASN1_GENERALSTRING * *a, const unsigned char * *in, long len); int i2d_ASN1_GENERALSTRING(ASN1_GENERALSTRING *a, unsigned char * *out); extern const ASN1_ITEM ASN1_GENERALSTRING_it; ASN1_UTCTIME *ASN1_UTCTIME_new(void); void ASN1_UTCTIME_free(ASN1_UTCTIME *a); ASN1_UTCTIME *d2i_ASN1_UTCTIME(ASN1_UTCTIME * *a, const unsigned char * *in, long len); int i2d_ASN1_UTCTIME(ASN1_UTCTIME *a, unsigned char * *out); extern const ASN1_ITEM ASN1_UTCTIME_it; ASN1_GENERALIZEDTIME *ASN1_GENERALIZEDTIME_new(void); void ASN1_GENERALIZEDTIME_free(ASN1_GENERALIZEDTIME *a); ASN1_GENERALIZEDTIME *d2i_ASN1_GENERALIZEDTIME(ASN1_GENERALIZEDTIME * *a, const unsigned char * *in, long len); int i2d_ASN1_GENERALIZEDTIME(ASN1_GENERALIZEDTIME *a, unsigned char * *out); extern const ASN1_ITEM ASN1_GENERALIZEDTIME_it; ASN1_TIME *ASN1_TIME_new(void); void ASN1_TIME_free(ASN1_TIME *a); ASN1_TIME *d2i_ASN1_TIME(ASN1_TIME * *a, const unsigned char * *in, long len); int i2d_ASN1_TIME(ASN1_TIME *a, unsigned char * *out); extern const ASN1_ITEM ASN1_TIME_it; extern const ASN1_ITEM ASN1_OCTET_STRING_NDEF_it; ASN1_TIME *ASN1_TIME_set(ASN1_TIME *s, time_t t); int ASN1_TIME_check(ASN1_TIME *t); ASN1_GENERALIZEDTIME *ASN1_TIME_to_generalizedtime(ASN1_TIME *t, ASN1_GENERALIZEDTIME **out); int i2d_ASN1_SET(STACK * a, unsigned char **pp, i2d_of_void *i2d, int ex_tag, int ex_class, int is_set); STACK *d2i_ASN1_SET(STACK ** a, const unsigned char **pp, long length, d2i_of_void *d2i, void (*free_func) (void *), int ex_tag, int ex_class); int i2a_ASN1_INTEGER(BIO *bp, ASN1_INTEGER *a); int a2i_ASN1_INTEGER(BIO *bp, ASN1_INTEGER *bs, char *buf, int size); int i2a_ASN1_ENUMERATED(BIO *bp, ASN1_ENUMERATED *a); int a2i_ASN1_ENUMERATED(BIO *bp, ASN1_ENUMERATED *bs, char *buf, int size); int i2a_ASN1_OBJECT(BIO *bp, ASN1_OBJECT *a); int a2i_ASN1_STRING(BIO *bp, ASN1_STRING *bs, char *buf, int size); int i2a_ASN1_STRING(BIO *bp, ASN1_STRING *a, int type); int i2t_ASN1_OBJECT(char *buf, int buf_len, ASN1_OBJECT *a); int a2d_ASN1_OBJECT(unsigned char *out, int olen, const char *buf, int num); ASN1_OBJECT *ASN1_OBJECT_create(int nid, unsigned char *data, int len, const char *sn, const char *ln); int ASN1_INTEGER_set(ASN1_INTEGER *a, long v); long ASN1_INTEGER_get(ASN1_INTEGER *a); ASN1_INTEGER *BN_to_ASN1_INTEGER(BIGNUM *bn, ASN1_INTEGER *ai); BIGNUM *ASN1_INTEGER_to_BN(ASN1_INTEGER *ai, BIGNUM *bn); int ASN1_ENUMERATED_set(ASN1_ENUMERATED *a, long v); long ASN1_ENUMERATED_get(ASN1_ENUMERATED *a); ASN1_ENUMERATED *BN_to_ASN1_ENUMERATED(BIGNUM *bn, ASN1_ENUMERATED *ai); BIGNUM *ASN1_ENUMERATED_to_BN(ASN1_ENUMERATED *ai, BIGNUM *bn); int ASN1_PRINTABLE_type(const unsigned char *s, int max); int i2d_ASN1_bytes(ASN1_STRING *a, unsigned char **pp, int tag, int xclass); ASN1_STRING *d2i_ASN1_bytes(ASN1_STRING **a, const unsigned char **pp, long length, int Ptag, int Pclass); unsigned long ASN1_tag2bit(int tag); ASN1_STRING *d2i_ASN1_type_bytes(ASN1_STRING **a, const unsigned char **pp, long length, int type); int asn1_Finish(ASN1_CTX *c); int asn1_const_Finish(ASN1_const_CTX *c); int ASN1_get_object(const unsigned char **pp, long *plength, int *ptag, int *pclass, long omax); int ASN1_check_infinite_end(unsigned char **p, long len); int ASN1_const_check_infinite_end(const unsigned char **p, long len); void ASN1_put_object(unsigned char **pp, int constructed, int length, int tag, int xclass); int ASN1_put_eoc(unsigned char **pp); int ASN1_object_size(int constructed, int length, int tag); void *ASN1_dup(i2d_of_void *i2d, d2i_of_void *d2i, char *x); void *ASN1_item_dup(const ASN1_ITEM *it, void *x); void *ASN1_d2i_fp(void *(*xnew) (void), d2i_of_void *d2i, FILE *in, void **x); void *ASN1_item_d2i_fp(const ASN1_ITEM *it, FILE *in, void *x); int ASN1_i2d_fp(i2d_of_void *i2d, FILE *out, void *x); int ASN1_item_i2d_fp(const ASN1_ITEM *it, FILE *out, void *x); int ASN1_STRING_print_ex_fp(FILE *fp, ASN1_STRING *str, unsigned long flags); int ASN1_STRING_to_UTF8(unsigned char **out, ASN1_STRING *in); void *ASN1_d2i_bio(void *(*xnew) (void), d2i_of_void *d2i, BIO *in, void **x); void *ASN1_item_d2i_bio(const ASN1_ITEM *it, BIO *in, void *x); int ASN1_i2d_bio(i2d_of_void *i2d, BIO *out, unsigned char *x); int ASN1_item_i2d_bio(const ASN1_ITEM *it, BIO *out, void *x); int ASN1_UTCTIME_print(BIO *fp, ASN1_UTCTIME *a); int ASN1_GENERALIZEDTIME_print(BIO *fp, ASN1_GENERALIZEDTIME *a); int ASN1_TIME_print(BIO *fp, ASN1_TIME *a); int ASN1_STRING_print(BIO *bp, ASN1_STRING *v); int ASN1_STRING_print_ex(BIO *out, ASN1_STRING *str, unsigned long flags); int ASN1_parse(BIO *bp, const unsigned char *pp, long len, int indent); int ASN1_parse_dump(BIO *bp, const unsigned char *pp, long len, int indent, int dump); const char *ASN1_tag2str(int tag); int i2d_ASN1_HEADER(ASN1_HEADER * a, unsigned char **pp); ASN1_HEADER *d2i_ASN1_HEADER(ASN1_HEADER ** a, const unsigned char **pp, long length); ASN1_HEADER *ASN1_HEADER_new(void); void ASN1_HEADER_free(ASN1_HEADER * a); int ASN1_UNIVERSALSTRING_to_string(ASN1_UNIVERSALSTRING *s); ASN1_METHOD *X509_asn1_meth(void); ASN1_METHOD *RSAPrivateKey_asn1_meth(void); ASN1_METHOD *ASN1_IA5STRING_asn1_meth(void); ASN1_METHOD *ASN1_BIT_STRING_asn1_meth(void); int ASN1_TYPE_set_octetstring(ASN1_TYPE *a, unsigned char *data, int len); int ASN1_TYPE_get_octetstring(ASN1_TYPE *a, unsigned char *data, int max_len); int ASN1_TYPE_set_int_octetstring(ASN1_TYPE *a, long num, unsigned char *data, int len); int ASN1_TYPE_get_int_octetstring(ASN1_TYPE *a, long *num, unsigned char *data, int max_len); STACK *ASN1_seq_unpack(const unsigned char *buf, int len, d2i_of_void *d2i, void (*free_func) (void *)); unsigned char *ASN1_seq_pack(STACK * safes, i2d_of_void *i2d, unsigned char **buf, int *len); void *ASN1_unpack_string(ASN1_STRING *oct, d2i_of_void *d2i); void *ASN1_item_unpack(ASN1_STRING *oct, const ASN1_ITEM *it); ASN1_STRING *ASN1_pack_string(void *obj, i2d_of_void *i2d, ASN1_OCTET_STRING **oct); ASN1_STRING *ASN1_item_pack(void *obj, const ASN1_ITEM *it, ASN1_OCTET_STRING **oct); void ASN1_STRING_set_default_mask(unsigned long mask); int ASN1_STRING_set_default_mask_asc(const char *p); unsigned long ASN1_STRING_get_default_mask(void); int ASN1_mbstring_copy(ASN1_STRING **out, const unsigned char *in, int len, int inform, unsigned long mask); int ASN1_mbstring_ncopy(ASN1_STRING **out, const unsigned char *in, int len, int inform, unsigned long mask, long minsize, long maxsize); ASN1_STRING *ASN1_STRING_set_by_NID(ASN1_STRING **out, const unsigned char *in, int inlen, int inform, int nid); ASN1_STRING_TABLE *ASN1_STRING_TABLE_get(int nid); int ASN1_STRING_TABLE_add(int, long, long, unsigned long, unsigned long); void ASN1_STRING_TABLE_cleanup(void); ASN1_VALUE *ASN1_item_new(const ASN1_ITEM *it); void ASN1_item_free(ASN1_VALUE *val, const ASN1_ITEM *it); ASN1_VALUE *ASN1_item_d2i(ASN1_VALUE **val, const unsigned char **in, long len, const ASN1_ITEM *it); int ASN1_item_i2d(ASN1_VALUE *val, unsigned char **out, const ASN1_ITEM *it); int ASN1_item_ndef_i2d(ASN1_VALUE *val, unsigned char **out, const ASN1_ITEM *it); void ASN1_add_oid_module(void); ASN1_TYPE *ASN1_generate_nconf(char *str, CONF *nconf); ASN1_TYPE *ASN1_generate_v3(char *str, X509V3_CTX *cnf); typedef int asn1_output_data_fn(BIO *out, BIO *data, ASN1_VALUE *val, int flags, const ASN1_ITEM *it); int int_smime_write_ASN1(BIO *bio, ASN1_VALUE *val, BIO *data, int flags, int ctype_nid, int econt_nid, STACK *mdalgs, asn1_output_data_fn * data_fn, const ASN1_ITEM *it); ASN1_VALUE *SMIME_read_ASN1(BIO *bio, BIO **bcont, const ASN1_ITEM *it); void ERR_load_ASN1_strings(void); #line 1222 "/usr/include/openssl/asn1.h" #line 1339 "/usr/include/openssl/asn1.h" #line 966 "/usr/include/openssl/objects.h" #line 973 "/usr/include/openssl/objects.h" typedef struct obj_name_st { int type; int alias; const char *name; const char *data; } OBJ_NAME; int OBJ_NAME_init(void); int OBJ_NAME_new_index(unsigned long (*hash_func) (const char *), int (*cmp_func) (const char *, const char *), void (*free_func) (const char *, int, const char *)); const char *OBJ_NAME_get(const char *name, int type); int OBJ_NAME_add(const char *name, int type, const char *data); int OBJ_NAME_remove(const char *name, int type); void OBJ_NAME_cleanup(int type); void OBJ_NAME_do_all(int type, void (*fn) (const OBJ_NAME *, void *arg), void *arg); void OBJ_NAME_do_all_sorted(int type, void (*fn) (const OBJ_NAME *, void *arg), void *arg); ASN1_OBJECT *OBJ_dup(const ASN1_OBJECT *o); ASN1_OBJECT *OBJ_nid2obj(int n); const char *OBJ_nid2ln(int n); const char *OBJ_nid2sn(int n); int OBJ_obj2nid(const ASN1_OBJECT *o); ASN1_OBJECT *OBJ_txt2obj(const char *s, int no_name); int OBJ_obj2txt(char *buf, int buf_len, const ASN1_OBJECT *a, int no_name); int OBJ_txt2nid(const char *s); int OBJ_ln2nid(const char *s); int OBJ_sn2nid(const char *s); int OBJ_cmp(const ASN1_OBJECT *a, const ASN1_OBJECT *b); const char *OBJ_bsearch(const char *key, const char *base, int num, int size, int (*cmp) (const void *, const void *)); const char *OBJ_bsearch_ex(const char *key, const char *base, int num, int size, int (*cmp) (const void *, const void *), int flags); int OBJ_new_nid(int num); int OBJ_add_object(const ASN1_OBJECT *obj); int OBJ_create(const char *oid, const char *sn, const char *ln); void OBJ_cleanup(void); int OBJ_create_objects(BIO *in); void ERR_load_OBJ_strings(void); #line 1047 "/usr/include/openssl/objects.h" #line 99 "/usr/include/openssl/evp.h" #line 111 "/usr/include/openssl/evp.h" #line 122 "/usr/include/openssl/evp.h" struct evp_pkey_st { int type; int save_type; int references; union { char *ptr; struct rsa_st *rsa; struct dsa_st *dsa; struct dh_st *dh; } pkey; int save_parameters; STACK *attributes; } ; #line 219 "/usr/include/openssl/evp.h" struct env_md_st { int type; int pkey_type; int md_size; unsigned long flags; int (*init) (EVP_MD_CTX *ctx); int (*update) (EVP_MD_CTX *ctx, const void *data, size_t count); int (*final) (EVP_MD_CTX *ctx, unsigned char *md); int (*copy) (EVP_MD_CTX *to, const EVP_MD_CTX *from); int (*cleanup) (EVP_MD_CTX *ctx); int (*sign) (int type, const unsigned char *m, unsigned int m_length, unsigned char *sigret, unsigned int *siglen, void *key); int (*verify) (int type, const unsigned char *m, unsigned int m_length, const unsigned char *sigbuf, unsigned int siglen, void *key); int required_pkey_type[5]; int block_size; int ctx_size; } ; typedef int evp_sign_method(int type, const unsigned char *m, unsigned int m_length, unsigned char *sigret, unsigned int *siglen, void *key); typedef int evp_verify_method(int type, const unsigned char *m, unsigned int m_length, const unsigned char *sigbuf, unsigned int siglen, void *key); typedef struct { EVP_MD_CTX *mctx; void *key; } EVP_MD_SVCTX; #line 274 "/usr/include/openssl/evp.h" #line 288 "/usr/include/openssl/evp.h" struct env_md_ctx_st { const EVP_MD *digest; ENGINE *engine; unsigned long flags; void *md_data; } ; #line 309 "/usr/include/openssl/evp.h" #line 318 "/usr/include/openssl/evp.h" struct evp_cipher_st { int nid; int block_size; int key_len; int iv_len; unsigned long flags; int (*init) (EVP_CIPHER_CTX *ctx, const unsigned char *key, const unsigned char *iv, int enc); int (*do_cipher) (EVP_CIPHER_CTX *ctx, unsigned char *out, const unsigned char *in, unsigned int inl); int (*cleanup) (EVP_CIPHER_CTX *); int ctx_size; int (*set_asn1_parameters) (EVP_CIPHER_CTX *, ASN1_TYPE *); int (*get_asn1_parameters) (EVP_CIPHER_CTX *, ASN1_TYPE *); int (*ctrl) (EVP_CIPHER_CTX *, int type, int arg, void *ptr); void *app_data; } ; #line 357 "/usr/include/openssl/evp.h" #line 389 "/usr/include/openssl/evp.h" typedef struct evp_cipher_info_st { const EVP_CIPHER *cipher; unsigned char iv[16]; } EVP_CIPHER_INFO; struct evp_cipher_ctx_st { const EVP_CIPHER *cipher; ENGINE *engine; int encrypt; int buf_len; unsigned char oiv[16]; unsigned char iv[16]; unsigned char buf[32]; int num; void *app_data; int key_len; unsigned long flags; void *cipher_data; int final_used; int block_mask; unsigned char final[32]; } ; typedef struct evp_Encode_Ctx_st { int num; int length; unsigned char enc_data[80]; int line_num; int expect_nl; } EVP_ENCODE_CTX; typedef int (EVP_PBE_KEYGEN) (EVP_CIPHER_CTX *ctx, const char *pass, int passlen, ASN1_TYPE *param, const EVP_CIPHER *cipher, const EVP_MD *md, int en_de); #line 467 "/usr/include/openssl/evp.h" int EVP_MD_type(const EVP_MD *md); int EVP_MD_pkey_type(const EVP_MD *md); int EVP_MD_size(const EVP_MD *md); int EVP_MD_block_size(const EVP_MD *md); const EVP_MD *EVP_MD_CTX_md(const EVP_MD_CTX *ctx); int EVP_CIPHER_nid(const EVP_CIPHER *cipher); int EVP_CIPHER_block_size(const EVP_CIPHER *cipher); int EVP_CIPHER_key_length(const EVP_CIPHER *cipher); int EVP_CIPHER_iv_length(const EVP_CIPHER *cipher); unsigned long EVP_CIPHER_flags(const EVP_CIPHER *cipher); const EVP_CIPHER *EVP_CIPHER_CTX_cipher(const EVP_CIPHER_CTX *ctx); int EVP_CIPHER_CTX_nid(const EVP_CIPHER_CTX *ctx); int EVP_CIPHER_CTX_block_size(const EVP_CIPHER_CTX *ctx); int EVP_CIPHER_CTX_key_length(const EVP_CIPHER_CTX *ctx); int EVP_CIPHER_CTX_iv_length(const EVP_CIPHER_CTX *ctx); void *EVP_CIPHER_CTX_get_app_data(const EVP_CIPHER_CTX *ctx); void EVP_CIPHER_CTX_set_app_data(EVP_CIPHER_CTX *ctx, void *data); unsigned long EVP_CIPHER_CTX_flags(const EVP_CIPHER_CTX *ctx); #line 512 "/usr/include/openssl/evp.h" #line 523 "/usr/include/openssl/evp.h" int EVP_Cipher(EVP_CIPHER_CTX *c, unsigned char *out, const unsigned char *in, unsigned int inl); #line 535 "/usr/include/openssl/evp.h" void EVP_MD_CTX_init(EVP_MD_CTX *ctx); int EVP_MD_CTX_cleanup(EVP_MD_CTX *ctx); EVP_MD_CTX *EVP_MD_CTX_create(void); void EVP_MD_CTX_destroy(EVP_MD_CTX *ctx); int EVP_MD_CTX_copy_ex(EVP_MD_CTX *out, const EVP_MD_CTX *in); void EVP_MD_CTX_set_flags(EVP_MD_CTX *ctx, int flags); void EVP_MD_CTX_clear_flags(EVP_MD_CTX *ctx, int flags); int EVP_MD_CTX_test_flags(const EVP_MD_CTX *ctx, int flags); int EVP_DigestInit_ex(EVP_MD_CTX *ctx, const EVP_MD *type, ENGINE *impl); int EVP_DigestUpdate(EVP_MD_CTX *ctx, const void *d, size_t cnt); int EVP_DigestFinal_ex(EVP_MD_CTX *ctx, unsigned char *md, unsigned int *s); int EVP_Digest(const void *data, size_t count, unsigned char *md, unsigned int *size, const EVP_MD *type, ENGINE *impl); int EVP_MD_CTX_copy(EVP_MD_CTX *out, const EVP_MD_CTX *in); int EVP_DigestInit(EVP_MD_CTX *ctx, const EVP_MD *type); int EVP_DigestFinal(EVP_MD_CTX *ctx, unsigned char *md, unsigned int *s); int EVP_read_pw_string(char *buf, int length, const char *prompt, int verify); void EVP_set_pw_prompt(const char *prompt); char *EVP_get_pw_prompt(void); int EVP_BytesToKey(const EVP_CIPHER *type, const EVP_MD *md, const unsigned char *salt, const unsigned char *data, int datal, int count, unsigned char *key, unsigned char *iv); void EVP_CIPHER_CTX_set_flags(EVP_CIPHER_CTX *ctx, int flags); void EVP_CIPHER_CTX_clear_flags(EVP_CIPHER_CTX *ctx, int flags); int EVP_CIPHER_CTX_test_flags(const EVP_CIPHER_CTX *ctx, int flags); int EVP_EncryptInit(EVP_CIPHER_CTX *ctx, const EVP_CIPHER *cipher, const unsigned char *key, const unsigned char *iv); int EVP_EncryptInit_ex(EVP_CIPHER_CTX *ctx, const EVP_CIPHER *cipher, ENGINE *impl, const unsigned char *key, const unsigned char *iv); int EVP_EncryptUpdate(EVP_CIPHER_CTX *ctx, unsigned char *out, int *outl, const unsigned char *in, int inl); int EVP_EncryptFinal_ex(EVP_CIPHER_CTX *ctx, unsigned char *out, int *outl); int EVP_EncryptFinal(EVP_CIPHER_CTX *ctx, unsigned char *out, int *outl); int EVP_DecryptInit(EVP_CIPHER_CTX *ctx, const EVP_CIPHER *cipher, const unsigned char *key, const unsigned char *iv); int EVP_DecryptInit_ex(EVP_CIPHER_CTX *ctx, const EVP_CIPHER *cipher, ENGINE *impl, const unsigned char *key, const unsigned char *iv); int EVP_DecryptUpdate(EVP_CIPHER_CTX *ctx, unsigned char *out, int *outl, const unsigned char *in, int inl); int EVP_DecryptFinal(EVP_CIPHER_CTX *ctx, unsigned char *outm, int *outl); int EVP_DecryptFinal_ex(EVP_CIPHER_CTX *ctx, unsigned char *outm, int *outl); int EVP_CipherInit(EVP_CIPHER_CTX *ctx, const EVP_CIPHER *cipher, const unsigned char *key, const unsigned char *iv, int enc); int EVP_CipherInit_ex(EVP_CIPHER_CTX *ctx, const EVP_CIPHER *cipher, ENGINE *impl, const unsigned char *key, const unsigned char *iv, int enc); int EVP_CipherUpdate(EVP_CIPHER_CTX *ctx, unsigned char *out, int *outl, const unsigned char *in, int inl); int EVP_CipherFinal(EVP_CIPHER_CTX *ctx, unsigned char *outm, int *outl); int EVP_CipherFinal_ex(EVP_CIPHER_CTX *ctx, unsigned char *outm, int *outl); int EVP_SignFinal(EVP_MD_CTX *ctx, unsigned char *md, unsigned int *s, EVP_PKEY *pkey); int EVP_VerifyFinal(EVP_MD_CTX *ctx, const unsigned char *sigbuf, unsigned int siglen, EVP_PKEY *pkey); int EVP_OpenInit(EVP_CIPHER_CTX *ctx, const EVP_CIPHER *type, const unsigned char *ek, int ekl, const unsigned char *iv, EVP_PKEY *priv); int EVP_OpenFinal(EVP_CIPHER_CTX *ctx, unsigned char *out, int *outl); int EVP_SealInit(EVP_CIPHER_CTX *ctx, const EVP_CIPHER *type, unsigned char **ek, int *ekl, unsigned char *iv, EVP_PKEY **pubk, int npubk); int EVP_SealFinal(EVP_CIPHER_CTX *ctx, unsigned char *out, int *outl); void EVP_EncodeInit(EVP_ENCODE_CTX *ctx); void EVP_EncodeUpdate(EVP_ENCODE_CTX *ctx, unsigned char *out, int *outl, const unsigned char *in, int inl); void EVP_EncodeFinal(EVP_ENCODE_CTX *ctx, unsigned char *out, int *outl); int EVP_EncodeBlock(unsigned char *t, const unsigned char *f, int n); void EVP_DecodeInit(EVP_ENCODE_CTX *ctx); int EVP_DecodeUpdate(EVP_ENCODE_CTX *ctx, unsigned char *out, int *outl, const unsigned char *in, int inl); int EVP_DecodeFinal(EVP_ENCODE_CTX *ctx, unsigned char *out, int *outl); int EVP_DecodeBlock(unsigned char *t, const unsigned char *f, int n); void EVP_CIPHER_CTX_init(EVP_CIPHER_CTX *a); int EVP_CIPHER_CTX_cleanup(EVP_CIPHER_CTX *a); EVP_CIPHER_CTX *EVP_CIPHER_CTX_new(void); void EVP_CIPHER_CTX_free(EVP_CIPHER_CTX *a); int EVP_CIPHER_CTX_set_key_length(EVP_CIPHER_CTX *x, int keylen); int EVP_CIPHER_CTX_set_padding(EVP_CIPHER_CTX *c, int pad); int EVP_CIPHER_CTX_ctrl(EVP_CIPHER_CTX *ctx, int type, int arg, void *ptr); int EVP_CIPHER_CTX_rand_key(EVP_CIPHER_CTX *ctx, unsigned char *key); BIO_METHOD *BIO_f_md(void); BIO_METHOD *BIO_f_base64(void); BIO_METHOD *BIO_f_cipher(void); BIO_METHOD *BIO_f_reliable(void); void BIO_set_cipher(BIO *b, const EVP_CIPHER *c, const unsigned char *k, const unsigned char *i, int enc); const EVP_MD *EVP_md_null(void); const EVP_MD *EVP_md2(void); const EVP_MD *EVP_md4(void); const EVP_MD *EVP_md5(void); const EVP_MD *EVP_sha(void); const EVP_MD *EVP_sha1(void); const EVP_MD *EVP_dss(void); const EVP_MD *EVP_dss1(void); const EVP_MD *EVP_ecdsa(void); const EVP_MD *EVP_sha224(void); const EVP_MD *EVP_sha256(void); const EVP_MD *EVP_sha384(void); const EVP_MD *EVP_sha512(void); const EVP_MD *EVP_ripemd160(void); const EVP_CIPHER *EVP_enc_null(void); const EVP_CIPHER *EVP_des_ecb(void); const EVP_CIPHER *EVP_des_ede(void); const EVP_CIPHER *EVP_des_ede3(void); const EVP_CIPHER *EVP_des_ede_ecb(void); const EVP_CIPHER *EVP_des_ede3_ecb(void); const EVP_CIPHER *EVP_des_cfb64(void); const EVP_CIPHER *EVP_des_cfb1(void); const EVP_CIPHER *EVP_des_cfb8(void); const EVP_CIPHER *EVP_des_ede_cfb64(void); const EVP_CIPHER *EVP_des_ede3_cfb64(void); const EVP_CIPHER *EVP_des_ede3_cfb1(void); const EVP_CIPHER *EVP_des_ede3_cfb8(void); const EVP_CIPHER *EVP_des_ofb(void); const EVP_CIPHER *EVP_des_ede_ofb(void); const EVP_CIPHER *EVP_des_ede3_ofb(void); const EVP_CIPHER *EVP_des_cbc(void); const EVP_CIPHER *EVP_des_ede_cbc(void); const EVP_CIPHER *EVP_des_ede3_cbc(void); const EVP_CIPHER *EVP_desx_cbc(void); #line 716 "/usr/include/openssl/evp.h" const EVP_CIPHER *EVP_rc4(void); const EVP_CIPHER *EVP_rc4_40(void); const EVP_CIPHER *EVP_rc2_ecb(void); const EVP_CIPHER *EVP_rc2_cbc(void); const EVP_CIPHER *EVP_rc2_40_cbc(void); const EVP_CIPHER *EVP_rc2_64_cbc(void); const EVP_CIPHER *EVP_rc2_cfb64(void); const EVP_CIPHER *EVP_rc2_ofb(void); const EVP_CIPHER *EVP_bf_ecb(void); const EVP_CIPHER *EVP_bf_cbc(void); const EVP_CIPHER *EVP_bf_cfb64(void); const EVP_CIPHER *EVP_bf_ofb(void); const EVP_CIPHER *EVP_cast5_ecb(void); const EVP_CIPHER *EVP_cast5_cbc(void); const EVP_CIPHER *EVP_cast5_cfb64(void); const EVP_CIPHER *EVP_cast5_ofb(void); const EVP_CIPHER *EVP_aes_128_ecb(void); const EVP_CIPHER *EVP_aes_128_cbc(void); const EVP_CIPHER *EVP_aes_128_cfb1(void); const EVP_CIPHER *EVP_aes_128_cfb8(void); const EVP_CIPHER *EVP_aes_128_cfb128(void); const EVP_CIPHER *EVP_aes_128_ofb(void); const EVP_CIPHER *EVP_aes_192_ecb(void); const EVP_CIPHER *EVP_aes_192_cbc(void); const EVP_CIPHER *EVP_aes_192_cfb1(void); const EVP_CIPHER *EVP_aes_192_cfb8(void); const EVP_CIPHER *EVP_aes_192_cfb128(void); const EVP_CIPHER *EVP_aes_192_ofb(void); const EVP_CIPHER *EVP_aes_256_ecb(void); const EVP_CIPHER *EVP_aes_256_cbc(void); const EVP_CIPHER *EVP_aes_256_cfb1(void); const EVP_CIPHER *EVP_aes_256_cfb8(void); const EVP_CIPHER *EVP_aes_256_cfb128(void); const EVP_CIPHER *EVP_aes_256_ofb(void); #line 797 "/usr/include/openssl/evp.h" #line 805 "/usr/include/openssl/evp.h" void OPENSSL_add_all_algorithms_noconf(void); void OPENSSL_add_all_algorithms_conf(void); #line 816 "/usr/include/openssl/evp.h" void OpenSSL_add_all_ciphers(void); void OpenSSL_add_all_digests(void); int EVP_add_cipher(const EVP_CIPHER *cipher); int EVP_add_digest(const EVP_MD *digest); const EVP_CIPHER *EVP_get_cipherbyname(const char *name); const EVP_MD *EVP_get_digestbyname(const char *name); void EVP_cleanup(void); int EVP_PKEY_decrypt(unsigned char *dec_key, const unsigned char *enc_key, int enc_key_len, EVP_PKEY *private_key); int EVP_PKEY_encrypt(unsigned char *enc_key, const unsigned char *key, int key_len, EVP_PKEY *pub_key); int EVP_PKEY_type(int type); int EVP_PKEY_bits(EVP_PKEY *pkey); int EVP_PKEY_size(EVP_PKEY *pkey); int EVP_PKEY_assign(EVP_PKEY *pkey, int type, char *key); struct rsa_st; int EVP_PKEY_set1_RSA(EVP_PKEY *pkey, struct rsa_st *key); struct rsa_st *EVP_PKEY_get1_RSA(EVP_PKEY *pkey); struct dsa_st; int EVP_PKEY_set1_DSA(EVP_PKEY *pkey, struct dsa_st *key); struct dsa_st *EVP_PKEY_get1_DSA(EVP_PKEY *pkey); struct dh_st; int EVP_PKEY_set1_DH(EVP_PKEY *pkey, struct dh_st *key); struct dh_st *EVP_PKEY_get1_DH(EVP_PKEY *pkey); EVP_PKEY *EVP_PKEY_new(void); void EVP_PKEY_free(EVP_PKEY *pkey); EVP_PKEY *d2i_PublicKey(int type, EVP_PKEY **a, const unsigned char **pp, long length); int i2d_PublicKey(EVP_PKEY *a, unsigned char **pp); EVP_PKEY *d2i_PrivateKey(int type, EVP_PKEY **a, const unsigned char **pp, long length); EVP_PKEY *d2i_AutoPrivateKey(EVP_PKEY **a, const unsigned char **pp, long length); int i2d_PrivateKey(EVP_PKEY *a, unsigned char **pp); int EVP_PKEY_copy_parameters(EVP_PKEY *to, const EVP_PKEY *from); int EVP_PKEY_missing_parameters(const EVP_PKEY *pkey); int EVP_PKEY_save_parameters(EVP_PKEY *pkey, int mode); int EVP_PKEY_cmp_parameters(const EVP_PKEY *a, const EVP_PKEY *b); int EVP_PKEY_cmp(const EVP_PKEY *a, const EVP_PKEY *b); int EVP_CIPHER_type(const EVP_CIPHER *ctx); int EVP_CIPHER_param_to_asn1(EVP_CIPHER_CTX *c, ASN1_TYPE *type); int EVP_CIPHER_asn1_to_param(EVP_CIPHER_CTX *c, ASN1_TYPE *type); int EVP_CIPHER_set_asn1_iv(EVP_CIPHER_CTX *c, ASN1_TYPE *type); int EVP_CIPHER_get_asn1_iv(EVP_CIPHER_CTX *c, ASN1_TYPE *type); int PKCS5_PBE_keyivgen(EVP_CIPHER_CTX *ctx, const char *pass, int passlen, ASN1_TYPE *param, const EVP_CIPHER *cipher, const EVP_MD *md, int en_de); int PKCS5_PBKDF2_HMAC_SHA1(const char *pass, int passlen, const unsigned char *salt, int saltlen, int iter, int keylen, unsigned char *out); int PKCS5_v2_PBE_keyivgen(EVP_CIPHER_CTX *ctx, const char *pass, int passlen, ASN1_TYPE *param, const EVP_CIPHER *cipher, const EVP_MD *md, int en_de); void PKCS5_PBE_add(void); int EVP_PBE_CipherInit(ASN1_OBJECT *pbe_obj, const char *pass, int passlen, ASN1_TYPE *param, EVP_CIPHER_CTX *ctx, int en_de); int EVP_PBE_alg_add(int nid, const EVP_CIPHER *cipher, const EVP_MD *md, EVP_PBE_KEYGEN *keygen); void EVP_PBE_cleanup(void); #line 922 "/usr/include/openssl/evp.h" void EVP_add_alg_module(void); void ERR_load_EVP_strings(void); #line 978 "/usr/include/openssl/evp.h" #line 1032 "/usr/include/openssl/evp.h" #line 74 "/usr/include/openssl/x509.h" #line 81 "/usr/include/openssl/x509.h" #line 1 "/usr/include/openssl/rsa.h" #line 72 "/usr/include/openssl/rsa.h" struct rsa_meth_st { const char *name; int (*rsa_pub_enc) (int flen, const unsigned char *from, unsigned char *to, RSA *rsa, int padding); int (*rsa_pub_dec) (int flen, const unsigned char *from, unsigned char *to, RSA *rsa, int padding); int (*rsa_priv_enc) (int flen, const unsigned char *from, unsigned char *to, RSA *rsa, int padding); int (*rsa_priv_dec) (int flen, const unsigned char *from, unsigned char *to, RSA *rsa, int padding); int (*rsa_mod_exp) (BIGNUM *r0, const BIGNUM *I, RSA *rsa, BN_CTX *ctx); int (*bn_mod_exp) (BIGNUM *r, const BIGNUM *a, const BIGNUM *p, const BIGNUM *m, BN_CTX *ctx, BN_MONT_CTX *m_ctx); int (*init) (RSA *rsa); int (*finish) (RSA *rsa); int flags; char *app_data; int (*rsa_sign) (int type, const unsigned char *m, unsigned int m_length, unsigned char *sigret, unsigned int *siglen, const RSA *rsa); int (*rsa_verify) (int dtype, const unsigned char *m, unsigned int m_length, unsigned char *sigbuf, unsigned int siglen, const RSA *rsa); int (*rsa_keygen) (RSA *rsa, int bits, BIGNUM *e, BN_GENCB *cb); }; struct rsa_st { int pad; long version; const RSA_METHOD *meth; ENGINE *engine; BIGNUM *n; BIGNUM *e; BIGNUM *d; BIGNUM *p; BIGNUM *q; BIGNUM *dmp1; BIGNUM *dmq1; BIGNUM *iqmp; CRYPTO_EX_DATA ex_data; int references; int flags; BN_MONT_CTX *_method_mod_n; BN_MONT_CTX *_method_mod_p; BN_MONT_CTX *_method_mod_q; char *bignum_data; BN_BLINDING *blinding; BN_BLINDING *mt_blinding; }; #line 258 "/usr/include/openssl/rsa.h" RSA *RSA_new(void); RSA *RSA_new_method(ENGINE *engine); int RSA_size(const RSA *); RSA *RSA_generate_key(int bits, unsigned long e, void (*callback) (int, int, void *), void *cb_arg); int RSA_generate_key_ex(RSA *rsa, int bits, BIGNUM *e, BN_GENCB *cb); int RSA_X931_derive_ex(RSA *rsa, BIGNUM *p1, BIGNUM *p2, BIGNUM *q1, BIGNUM *q2, const BIGNUM *Xp1, const BIGNUM *Xp2, const BIGNUM *Xp, const BIGNUM *Xq1, const BIGNUM *Xq2, const BIGNUM *Xq, const BIGNUM *e, BN_GENCB *cb); int RSA_X931_generate_key_ex(RSA *rsa, int bits, const BIGNUM *e, BN_GENCB *cb); int RSA_check_key(const RSA *); int RSA_public_encrypt(int flen, const unsigned char *from, unsigned char *to, RSA *rsa, int padding); int RSA_private_encrypt(int flen, const unsigned char *from, unsigned char *to, RSA *rsa, int padding); int RSA_public_decrypt(int flen, const unsigned char *from, unsigned char *to, RSA *rsa, int padding); int RSA_private_decrypt(int flen, const unsigned char *from, unsigned char *to, RSA *rsa, int padding); void RSA_free(RSA *r); int RSA_up_ref(RSA *r); int RSA_flags(const RSA *r); void RSA_set_default_method(const RSA_METHOD *meth); const RSA_METHOD *RSA_get_default_method(void); const RSA_METHOD *RSA_get_method(const RSA *rsa); int RSA_set_method(RSA *rsa, const RSA_METHOD *meth); int RSA_memory_lock(RSA *r); const RSA_METHOD *RSA_PKCS1_SSLeay(void); const RSA_METHOD *RSA_null_method(void); RSA *d2i_RSAPublicKey(RSA * *a, const unsigned char * *in, long len); int i2d_RSAPublicKey(const RSA *a, unsigned char * *out); extern const ASN1_ITEM RSAPublicKey_it; RSA *d2i_RSAPrivateKey(RSA * *a, const unsigned char * *in, long len); int i2d_RSAPrivateKey(const RSA *a, unsigned char * *out); extern const ASN1_ITEM RSAPrivateKey_it; int RSA_print_fp(FILE *fp, const RSA *r, int offset); int RSA_print(BIO *bp, const RSA *r, int offset); int i2d_RSA_NET(const RSA *a, unsigned char **pp, int (*cb) (char *buf, int len, const char *prompt, int verify), int sgckey); RSA *d2i_RSA_NET(RSA **a, const unsigned char **pp, long length, int (*cb) (char *buf, int len, const char *prompt, int verify), int sgckey); int i2d_Netscape_RSA(const RSA *a, unsigned char **pp, int (*cb) (char *buf, int len, const char *prompt, int verify)); RSA *d2i_Netscape_RSA(RSA **a, const unsigned char **pp, long length, int (*cb) (char *buf, int len, const char *prompt, int verify)); int RSA_sign(int type, const unsigned char *m, unsigned int m_length, unsigned char *sigret, unsigned int *siglen, RSA *rsa); int RSA_verify(int type, const unsigned char *m, unsigned int m_length, unsigned char *sigbuf, unsigned int siglen, RSA *rsa); int RSA_sign_ASN1_OCTET_STRING(int type, const unsigned char *m, unsigned int m_length, unsigned char *sigret, unsigned int *siglen, RSA *rsa); int RSA_verify_ASN1_OCTET_STRING(int type, const unsigned char *m, unsigned int m_length, unsigned char *sigbuf, unsigned int siglen, RSA *rsa); int RSA_blinding_on(RSA *rsa, BN_CTX *ctx); void RSA_blinding_off(RSA *rsa); BN_BLINDING *RSA_setup_blinding(RSA *rsa, BN_CTX *ctx); int RSA_padding_add_PKCS1_type_1(unsigned char *to, int tlen, const unsigned char *f, int fl); int RSA_padding_check_PKCS1_type_1(unsigned char *to, int tlen, const unsigned char *f, int fl, int rsa_len); int RSA_padding_add_PKCS1_type_2(unsigned char *to, int tlen, const unsigned char *f, int fl); int RSA_padding_check_PKCS1_type_2(unsigned char *to, int tlen, const unsigned char *f, int fl, int rsa_len); int PKCS1_MGF1(unsigned char *mask, long len, const unsigned char *seed, long seedlen, const EVP_MD *dgst); int RSA_padding_add_PKCS1_OAEP(unsigned char *to, int tlen, const unsigned char *f, int fl, const unsigned char *p, int pl); int RSA_padding_check_PKCS1_OAEP(unsigned char *to, int tlen, const unsigned char *f, int fl, int rsa_len, const unsigned char *p, int pl); int RSA_padding_add_SSLv23(unsigned char *to, int tlen, const unsigned char *f, int fl); int RSA_padding_check_SSLv23(unsigned char *to, int tlen, const unsigned char *f, int fl, int rsa_len); int RSA_padding_add_none(unsigned char *to, int tlen, const unsigned char *f, int fl); int RSA_padding_check_none(unsigned char *to, int tlen, const unsigned char *f, int fl, int rsa_len); int RSA_padding_add_X931(unsigned char *to, int tlen, const unsigned char *f, int fl); int RSA_padding_check_X931(unsigned char *to, int tlen, const unsigned char *f, int fl, int rsa_len); int RSA_X931_hash_id(int nid); int RSA_verify_PKCS1_PSS(RSA *rsa, const unsigned char *mHash, const EVP_MD *Hash, const unsigned char *EM, int sLen); int RSA_padding_add_PKCS1_PSS(RSA *rsa, unsigned char *EM, const unsigned char *mHash, const EVP_MD *Hash, int sLen); int RSA_get_ex_new_index(long argl, void *argp, CRYPTO_EX_new *new_func, CRYPTO_EX_dup *dup_func, CRYPTO_EX_free *free_func); int RSA_set_ex_data(RSA *r, int idx, void *arg); void *RSA_get_ex_data(const RSA *r, int idx); RSA *RSAPublicKey_dup(RSA *rsa); RSA *RSAPrivateKey_dup(RSA *rsa); void ERR_load_RSA_strings(void); #line 475 "/usr/include/openssl/rsa.h" #line 521 "/usr/include/openssl/rsa.h" #line 88 "/usr/include/openssl/x509.h" #line 1 "/usr/include/openssl/dsa.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 69 "/usr/include/openssl/dsa.h" #line 1 "/usr/include/openssl/dh.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 63 "/usr/include/openssl/dh.h" #line 75 "/usr/include/openssl/dh.h" struct dh_method { const char *name; int (*generate_key) (DH *dh); int (*compute_key) (unsigned char *key, const BIGNUM *pub_key, DH *dh); int (*bn_mod_exp) (const DH *dh, BIGNUM *r, const BIGNUM *a, const BIGNUM *p, const BIGNUM *m, BN_CTX *ctx, BN_MONT_CTX *m_ctx); int (*init) (DH *dh); int (*finish) (DH *dh); int flags; char *app_data; int (*generate_params) (DH *dh, int prime_len, int generator, BN_GENCB *cb); }; struct dh_st { int pad; int version; BIGNUM *p; BIGNUM *g; long length; BIGNUM *pub_key; BIGNUM *priv_key; int flags; BN_MONT_CTX *method_mont_p; BIGNUM *q; BIGNUM *j; unsigned char *seed; int seedlen; BIGNUM *counter; int references; CRYPTO_EX_DATA ex_data; const DH_METHOD *meth; ENGINE *engine; }; #line 173 "/usr/include/openssl/dh.h" const DH_METHOD *DH_OpenSSL(void); void DH_set_default_method(const DH_METHOD *meth); const DH_METHOD *DH_get_default_method(void); int DH_set_method(DH *dh, const DH_METHOD *meth); DH *DH_new_method(ENGINE *engine); DH *DH_new(void); void DH_free(DH *dh); int DH_up_ref(DH *dh); int DH_size(const DH *dh); int DH_get_ex_new_index(long argl, void *argp, CRYPTO_EX_new *new_func, CRYPTO_EX_dup *dup_func, CRYPTO_EX_free *free_func); int DH_set_ex_data(DH *d, int idx, void *arg); void *DH_get_ex_data(DH *d, int idx); DH *DH_generate_parameters(int prime_len, int generator, void (*callback) (int, int, void *), void *cb_arg); int DH_generate_parameters_ex(DH *dh, int prime_len, int generator, BN_GENCB *cb); int DH_check(const DH *dh, int *codes); int DH_check_pub_key(const DH *dh, const BIGNUM *pub_key, int *codes); int DH_generate_key(DH *dh); int DH_compute_key(unsigned char *key, const BIGNUM *pub_key, DH *dh); DH *d2i_DHparams(DH **a, const unsigned char **pp, long length); int i2d_DHparams(const DH *a, unsigned char **pp); int DHparams_print_fp(FILE *fp, const DH *x); int DHparams_print(BIO *bp, const DH *x); void ERR_load_DH_strings(void); #line 240 "/usr/include/openssl/dh.h" #line 84 "/usr/include/openssl/dsa.h" typedef struct DSA_SIG_st { BIGNUM *r; BIGNUM *s; } DSA_SIG; struct dsa_method { const char *name; DSA_SIG *(*dsa_do_sign) (const unsigned char *dgst, int dlen, DSA *dsa); int (*dsa_sign_setup) (DSA *dsa, BN_CTX *ctx_in, BIGNUM **kinvp, BIGNUM **rp); int (*dsa_do_verify) (const unsigned char *dgst, int dgst_len, DSA_SIG *sig, DSA *dsa); int (*dsa_mod_exp) (DSA *dsa, BIGNUM *rr, BIGNUM *a1, BIGNUM *p1, BIGNUM *a2, BIGNUM *p2, BIGNUM *m, BN_CTX *ctx, BN_MONT_CTX *in_mont); int (*bn_mod_exp) (DSA *dsa, BIGNUM *r, BIGNUM *a, const BIGNUM *p, const BIGNUM *m, BN_CTX *ctx, BN_MONT_CTX *m_ctx); int (*init) (DSA *dsa); int (*finish) (DSA *dsa); int flags; char *app_data; int (*dsa_paramgen) (DSA *dsa, int bits, unsigned char *seed, int seed_len, int *counter_ret, unsigned long *h_ret, BN_GENCB *cb); int (*dsa_keygen) (DSA *dsa); }; struct dsa_st { int pad; long version; int write_params; BIGNUM *p; BIGNUM *q; BIGNUM *g; BIGNUM *pub_key; BIGNUM *priv_key; BIGNUM *kinv; BIGNUM *r; int flags; BN_MONT_CTX *method_mont_p; int references; CRYPTO_EX_DATA ex_data; const DSA_METHOD *meth; ENGINE *engine; }; #line 193 "/usr/include/openssl/dsa.h" DSA_SIG *DSA_SIG_new(void); void DSA_SIG_free(DSA_SIG *a); int i2d_DSA_SIG(const DSA_SIG *a, unsigned char **pp); DSA_SIG *d2i_DSA_SIG(DSA_SIG **v, const unsigned char **pp, long length); DSA_SIG *DSA_do_sign(const unsigned char *dgst, int dlen, DSA *dsa); int DSA_do_verify(const unsigned char *dgst, int dgst_len, DSA_SIG *sig, DSA *dsa); const DSA_METHOD *DSA_OpenSSL(void); void DSA_set_default_method(const DSA_METHOD *); const DSA_METHOD *DSA_get_default_method(void); int DSA_set_method(DSA *dsa, const DSA_METHOD *); DSA *DSA_new(void); DSA *DSA_new_method(ENGINE *engine); void DSA_free(DSA *r); int DSA_up_ref(DSA *r); int DSA_size(const DSA *); int DSA_sign_setup(DSA *dsa, BN_CTX *ctx_in, BIGNUM **kinvp, BIGNUM **rp); int DSA_sign(int type, const unsigned char *dgst, int dlen, unsigned char *sig, unsigned int *siglen, DSA *dsa); int DSA_verify(int type, const unsigned char *dgst, int dgst_len, const unsigned char *sigbuf, int siglen, DSA *dsa); int DSA_get_ex_new_index(long argl, void *argp, CRYPTO_EX_new *new_func, CRYPTO_EX_dup *dup_func, CRYPTO_EX_free *free_func); int DSA_set_ex_data(DSA *d, int idx, void *arg); void *DSA_get_ex_data(DSA *d, int idx); DSA *d2i_DSAPublicKey(DSA **a, const unsigned char **pp, long length); DSA *d2i_DSAPrivateKey(DSA **a, const unsigned char **pp, long length); DSA *d2i_DSAparams(DSA **a, const unsigned char **pp, long length); DSA *DSA_generate_parameters(int bits, unsigned char *seed, int seed_len, int *counter_ret, unsigned long *h_ret, void (*callback) (int, int, void *), void *cb_arg); int DSA_generate_parameters_ex(DSA *dsa, int bits, unsigned char *seed, int seed_len, int *counter_ret, unsigned long *h_ret, BN_GENCB *cb); int DSA_generate_key(DSA *a); int i2d_DSAPublicKey(const DSA *a, unsigned char **pp); int i2d_DSAPrivateKey(const DSA *a, unsigned char **pp); int i2d_DSAparams(const DSA *a, unsigned char **pp); int DSAparams_print(BIO *bp, const DSA *x); int DSA_print(BIO *bp, const DSA *x, int off); int DSAparams_print_fp(FILE *fp, const DSA *x); int DSA_print_fp(FILE *bp, const DSA *x, int off); DH *DSA_dup_DH(const DSA *r); void ERR_load_DSA_strings(void); #line 313 "/usr/include/openssl/dsa.h" #line 322 "/usr/include/openssl/dsa.h" #line 91 "/usr/include/openssl/x509.h" #line 1 "/usr/include/openssl/sha.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 63 "/usr/include/openssl/sha.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "/usr/include/openssl/sha.h" #line 92 "/usr/include/openssl/sha.h" #line 99 "/usr/include/openssl/sha.h" typedef struct SHAstate_st { unsigned int h0, h1, h2, h3, h4; unsigned int Nl, Nh; unsigned int data[16]; unsigned int num; } SHA_CTX; int SHA_Init(SHA_CTX *c); int SHA_Update(SHA_CTX *c, const void *data, size_t len); int SHA_Final(unsigned char *md, SHA_CTX *c); unsigned char *SHA(const unsigned char *d, size_t n, unsigned char *md); void SHA_Transform(SHA_CTX *c, const unsigned char *data); int SHA1_Init(SHA_CTX *c); int SHA1_Update(SHA_CTX *c, const void *data, size_t len); int SHA1_Final(unsigned char *md, SHA_CTX *c); unsigned char *SHA1(const unsigned char *d, size_t n, unsigned char *md); void SHA1_Transform(SHA_CTX *c, const unsigned char *data); typedef struct SHA256state_st { unsigned int h[8]; unsigned int Nl, Nh; unsigned int data[16]; unsigned int num, md_len; } SHA256_CTX; int SHA224_Init(SHA256_CTX *c); int SHA224_Update(SHA256_CTX *c, const void *data, size_t len); int SHA224_Final(unsigned char *md, SHA256_CTX *c); unsigned char *SHA224(const unsigned char *d, size_t n, unsigned char *md); int SHA256_Init(SHA256_CTX *c); int SHA256_Update(SHA256_CTX *c, const void *data, size_t len); int SHA256_Final(unsigned char *md, SHA256_CTX *c); unsigned char *SHA256(const unsigned char *d, size_t n, unsigned char *md); void SHA256_Transform(SHA256_CTX *c, const unsigned char *data); #line 175 "/usr/include/openssl/sha.h" typedef struct SHA512state_st { unsigned long h[8]; unsigned long Nl, Nh; union { unsigned long d[16]; unsigned char p[(16*8)]; } u; unsigned int num, md_len; } SHA512_CTX; int SHA384_Init(SHA512_CTX *c); int SHA384_Update(SHA512_CTX *c, const void *data, size_t len); int SHA384_Final(unsigned char *md, SHA512_CTX *c); unsigned char *SHA384(const unsigned char *d, size_t n, unsigned char *md); int SHA512_Init(SHA512_CTX *c); int SHA512_Update(SHA512_CTX *c, const void *data, size_t len); int SHA512_Final(unsigned char *md, SHA512_CTX *c); unsigned char *SHA512(const unsigned char *d, size_t n, unsigned char *md); void SHA512_Transform(SHA512_CTX *c, const unsigned char *data); #line 99 "/usr/include/openssl/x509.h" #line 112 "/usr/include/openssl/x509.h" #line 127 "/usr/include/openssl/x509.h" typedef struct X509_objects_st { int nid; int (*a2i) (void); int (*i2a) (void); } X509_OBJECTS; struct X509_algor_st { ASN1_OBJECT *algorithm; ASN1_TYPE *parameter; } ; typedef STACK X509_ALGORS; typedef struct X509_val_st { ASN1_TIME *notBefore; ASN1_TIME *notAfter; } X509_VAL; typedef struct X509_pubkey_st { X509_ALGOR *algor; ASN1_BIT_STRING *public_key; EVP_PKEY *pkey; } X509_PUBKEY; typedef struct X509_sig_st { X509_ALGOR *algor; ASN1_OCTET_STRING *digest; } X509_SIG; typedef struct X509_name_entry_st { ASN1_OBJECT *object; ASN1_STRING *value; int set; int size; } X509_NAME_ENTRY; struct X509_name_st { STACK *entries; int modified; BUF_MEM *bytes; unsigned long hash; } ; typedef struct X509_extension_st { ASN1_OBJECT *object; ASN1_BOOLEAN critical; ASN1_OCTET_STRING *value; } X509_EXTENSION; typedef STACK X509_EXTENSIONS; typedef struct x509_attributes_st { ASN1_OBJECT *object; int single; union { char *ptr; STACK *set; ASN1_TYPE *single; } value; } X509_ATTRIBUTE; typedef struct X509_req_info_st { ASN1_ENCODING enc; ASN1_INTEGER *version; X509_NAME *subject; X509_PUBKEY *pubkey; STACK *attributes; } X509_REQ_INFO; typedef struct X509_req_st { X509_REQ_INFO *req_info; X509_ALGOR *sig_alg; ASN1_BIT_STRING *signature; int references; } X509_REQ; typedef struct x509_cinf_st { ASN1_INTEGER *version; ASN1_INTEGER *serialNumber; X509_ALGOR *signature; X509_NAME *issuer; X509_VAL *validity; X509_NAME *subject; X509_PUBKEY *key; ASN1_BIT_STRING *issuerUID; ASN1_BIT_STRING *subjectUID; STACK *extensions; ASN1_ENCODING enc; } X509_CINF; typedef struct x509_cert_aux_st { STACK *trust; STACK *reject; ASN1_UTF8STRING *alias; ASN1_OCTET_STRING *keyid; STACK *other; } X509_CERT_AUX; struct x509_st { X509_CINF *cert_info; X509_ALGOR *sig_alg; ASN1_BIT_STRING *signature; int valid; int references; char *name; CRYPTO_EX_DATA ex_data; long ex_pathlen; long ex_pcpathlen; unsigned long ex_flags; unsigned long ex_kusage; unsigned long ex_xkusage; unsigned long ex_nscert; ASN1_OCTET_STRING *skid; struct AUTHORITY_KEYID_st *akid; X509_POLICY_CACHE *policy_cache; unsigned char sha1_hash[20]; X509_CERT_AUX *aux; } ; typedef struct x509_trust_st { int trust; int flags; int (*check_trust) (struct x509_trust_st *, X509 *, int); char *name; int arg1; void *arg2; } X509_TRUST; typedef struct x509_cert_pair_st { X509 *forward; X509 *reverse; } X509_CERT_PAIR; #line 319 "/usr/include/openssl/x509.h" #line 349 "/usr/include/openssl/x509.h" #line 362 "/usr/include/openssl/x509.h" #line 410 "/usr/include/openssl/x509.h" typedef struct X509_revoked_st { ASN1_INTEGER *serialNumber; ASN1_TIME *revocationDate; STACK *extensions; int sequence; } X509_REVOKED; typedef struct X509_crl_info_st { ASN1_INTEGER *version; X509_ALGOR *sig_alg; X509_NAME *issuer; ASN1_TIME *lastUpdate; ASN1_TIME *nextUpdate; STACK *revoked; STACK *extensions; ASN1_ENCODING enc; } X509_CRL_INFO; struct X509_crl_st { X509_CRL_INFO *crl; X509_ALGOR *sig_alg; ASN1_BIT_STRING *signature; int references; } ; typedef struct private_key_st { int version; X509_ALGOR *enc_algor; ASN1_OCTET_STRING *enc_pkey; EVP_PKEY *dec_pkey; int key_length; char *key_data; int key_free; EVP_CIPHER_INFO cipher; int references; } X509_PKEY; typedef struct X509_info_st { X509 *x509; X509_CRL *crl; X509_PKEY *x_pkey; EVP_CIPHER_INFO enc_cipher; int enc_len; char *enc_data; int references; } X509_INFO; typedef struct Netscape_spkac_st { X509_PUBKEY *pubkey; ASN1_IA5STRING *challenge; } NETSCAPE_SPKAC; typedef struct Netscape_spki_st { NETSCAPE_SPKAC *spkac; X509_ALGOR *sig_algor; ASN1_BIT_STRING *signature; } NETSCAPE_SPKI; typedef struct Netscape_certificate_sequence { ASN1_OBJECT *type; STACK *certs; } NETSCAPE_CERT_SEQUENCE; typedef struct PBEPARAM_st { ASN1_OCTET_STRING *salt; ASN1_INTEGER *iter; } PBEPARAM; typedef struct PBE2PARAM_st { X509_ALGOR *keyfunc; X509_ALGOR *encryption; } PBE2PARAM; typedef struct PBKDF2PARAM_st { ASN1_TYPE *salt; ASN1_INTEGER *iter; ASN1_INTEGER *keylength; X509_ALGOR *prf; } PBKDF2PARAM; typedef struct pkcs8_priv_key_info_st { int broken; ASN1_INTEGER *version; X509_ALGOR *pkeyalg; ASN1_TYPE *pkey; STACK *attributes; } PKCS8_PRIV_KEY_INFO; #line 1 "/usr/include/openssl/x509_vfy.h" #line 66 "/usr/include/openssl/x509_vfy.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 71 "/usr/include/openssl/x509_vfy.h" #line 1 "/usr/include/openssl/lhash.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 67 "/usr/include/openssl/lhash.h" typedef struct lhash_node_st { void *data; struct lhash_node_st *next; unsigned long hash; } LHASH_NODE; typedef int (*LHASH_COMP_FN_TYPE) (const void *, const void *); typedef unsigned long (*LHASH_HASH_FN_TYPE) (const void *); typedef void (*LHASH_DOALL_FN_TYPE) (void *); typedef void (*LHASH_DOALL_ARG_FN_TYPE) (void *, void *); #line 109 "/usr/include/openssl/lhash.h" #line 119 "/usr/include/openssl/lhash.h" #line 128 "/usr/include/openssl/lhash.h" #line 138 "/usr/include/openssl/lhash.h" typedef struct lhash_st { LHASH_NODE **b; LHASH_COMP_FN_TYPE comp; LHASH_HASH_FN_TYPE hash; unsigned int num_nodes; unsigned int num_alloc_nodes; unsigned int p; unsigned int pmax; unsigned long up_load; unsigned long down_load; unsigned long num_items; unsigned long num_expands; unsigned long num_expand_reallocs; unsigned long num_contracts; unsigned long num_contract_reallocs; unsigned long num_hash_calls; unsigned long num_comp_calls; unsigned long num_insert; unsigned long num_replace; unsigned long num_delete; unsigned long num_no_delete; unsigned long num_retrieve; unsigned long num_retrieve_miss; unsigned long num_hash_comps; int error; } LHASH; LHASH *lh_new(LHASH_HASH_FN_TYPE h, LHASH_COMP_FN_TYPE c); void lh_free(LHASH *lh); void *lh_insert(LHASH *lh, void *data); void *lh_delete(LHASH *lh, const void *data); void *lh_retrieve(LHASH *lh, const void *data); void lh_doall(LHASH *lh, LHASH_DOALL_FN_TYPE func); void lh_doall_arg(LHASH *lh, LHASH_DOALL_ARG_FN_TYPE func, void *arg); unsigned long lh_strhash(const char *c); unsigned long lh_num_items(const LHASH *lh); void lh_stats(const LHASH *lh, FILE *out); void lh_node_stats(const LHASH *lh, FILE *out); void lh_node_usage_stats(const LHASH *lh, FILE *out); void lh_stats_bio(const LHASH *lh, BIO *out); void lh_node_stats_bio(const LHASH *lh, BIO *out); void lh_node_usage_stats_bio(const LHASH *lh, BIO *out); #line 73 "/usr/include/openssl/x509_vfy.h" #line 1 "/usr/include/openssl/symhacks.h" #line 436 "/usr/include/openssl/symhacks.h" #line 77 "/usr/include/openssl/x509_vfy.h" typedef struct x509_hash_dir_st { int num_dirs; char **dirs; int *dirs_type; int num_dirs_alloced; } X509_HASH_DIR_CTX; typedef struct x509_file_st { int num_paths; int num_alloced; char **paths; int *path_type; } X509_CERT_FILE_CTX; typedef struct x509_object_st { int type; union { char *ptr; X509 *x509; X509_CRL *crl; EVP_PKEY *pkey; } data; } X509_OBJECT; typedef struct x509_lookup_st X509_LOOKUP; typedef struct x509_lookup_method_st { const char *name; int (*new_item) (X509_LOOKUP *ctx); void (*free) (X509_LOOKUP *ctx); int (*init) (X509_LOOKUP *ctx); int (*shutdown) (X509_LOOKUP *ctx); int (*ctrl) (X509_LOOKUP *ctx, int cmd, const char *argc, long argl, char **ret); int (*get_by_subject) (X509_LOOKUP *ctx, int type, X509_NAME *name, X509_OBJECT *ret); int (*get_by_issuer_serial) (X509_LOOKUP *ctx, int type, X509_NAME *name, ASN1_INTEGER *serial, X509_OBJECT *ret); int (*get_by_fingerprint) (X509_LOOKUP *ctx, int type, unsigned char *bytes, int len, X509_OBJECT *ret); int (*get_by_alias) (X509_LOOKUP *ctx, int type, char *str, int len, X509_OBJECT *ret); } X509_LOOKUP_METHOD; typedef struct X509_VERIFY_PARAM_st { char *name; time_t check_time; unsigned long inh_flags; unsigned long flags; int purpose; int trust; int depth; STACK *policies; } X509_VERIFY_PARAM; struct x509_store_st { int cache; STACK *objs; STACK *get_cert_methods; X509_VERIFY_PARAM *param; int (*verify) (X509_STORE_CTX *ctx); int (*verify_cb) (int ok, X509_STORE_CTX *ctx); int (*get_issuer) (X509 **issuer, X509_STORE_CTX *ctx, X509 *x); int (*check_issued) (X509_STORE_CTX *ctx, X509 *x, X509 *issuer); int (*check_revocation) (X509_STORE_CTX *ctx); int (*get_crl) (X509_STORE_CTX *ctx, X509_CRL **crl, X509 *x); int (*check_crl) (X509_STORE_CTX *ctx, X509_CRL *crl); int (*cert_crl) (X509_STORE_CTX *ctx, X509_CRL *crl, X509 *x); int (*cleanup) (X509_STORE_CTX *ctx); CRYPTO_EX_DATA ex_data; int references; } ; int X509_STORE_set_depth(X509_STORE *store, int depth); struct x509_lookup_st { int init; int skip; X509_LOOKUP_METHOD *method; char *method_data; X509_STORE *store_ctx; } ; struct x509_store_ctx_st { X509_STORE *ctx; int current_method; X509 *cert; STACK *untrusted; STACK *crls; X509_VERIFY_PARAM *param; void *other_ctx; int (*verify) (X509_STORE_CTX *ctx); int (*verify_cb) (int ok, X509_STORE_CTX *ctx); int (*get_issuer) (X509 **issuer, X509_STORE_CTX *ctx, X509 *x); int (*check_issued) (X509_STORE_CTX *ctx, X509 *x, X509 *issuer); int (*check_revocation) (X509_STORE_CTX *ctx); int (*get_crl) (X509_STORE_CTX *ctx, X509_CRL **crl, X509 *x); int (*check_crl) (X509_STORE_CTX *ctx, X509_CRL *crl); int (*cert_crl) (X509_STORE_CTX *ctx, X509_CRL *crl, X509 *x); int (*check_policy) (X509_STORE_CTX *ctx); int (*cleanup) (X509_STORE_CTX *ctx); int valid; int last_untrusted; STACK *chain; X509_POLICY_TREE *tree; int explicit_policy; int error_depth; int error; X509 *current_cert; X509 *current_issuer; X509_CRL *current_crl; CRYPTO_EX_DATA ex_data; } ; void X509_STORE_CTX_set_depth(X509_STORE_CTX *ctx, int depth); #line 330 "/usr/include/openssl/x509_vfy.h" #line 344 "/usr/include/openssl/x509_vfy.h" int X509_OBJECT_idx_by_subject(STACK *h, int type, X509_NAME *name); X509_OBJECT *X509_OBJECT_retrieve_by_subject(STACK *h, int type, X509_NAME *name); X509_OBJECT *X509_OBJECT_retrieve_match(STACK *h, X509_OBJECT *x); void X509_OBJECT_up_ref_count(X509_OBJECT *a); void X509_OBJECT_free_contents(X509_OBJECT *a); X509_STORE *X509_STORE_new(void); void X509_STORE_free(X509_STORE *v); int X509_STORE_set_flags(X509_STORE *ctx, unsigned long flags); int X509_STORE_set_purpose(X509_STORE *ctx, int purpose); int X509_STORE_set_trust(X509_STORE *ctx, int trust); int X509_STORE_set1_param(X509_STORE *ctx, X509_VERIFY_PARAM *pm); X509_STORE_CTX *X509_STORE_CTX_new(void); int X509_STORE_CTX_get1_issuer(X509 **issuer, X509_STORE_CTX *ctx, X509 *x); void X509_STORE_CTX_free(X509_STORE_CTX *ctx); int X509_STORE_CTX_init(X509_STORE_CTX *ctx, X509_STORE *store, X509 *x509, STACK *chain); void X509_STORE_CTX_trusted_stack(X509_STORE_CTX *ctx, STACK *sk); void X509_STORE_CTX_cleanup(X509_STORE_CTX *ctx); X509_LOOKUP *X509_STORE_add_lookup(X509_STORE *v, X509_LOOKUP_METHOD *m); X509_LOOKUP_METHOD *X509_LOOKUP_hash_dir(void); X509_LOOKUP_METHOD *X509_LOOKUP_file(void); int X509_STORE_add_cert(X509_STORE *ctx, X509 *x); int X509_STORE_add_crl(X509_STORE *ctx, X509_CRL *x); int X509_STORE_get_by_subject(X509_STORE_CTX *vs, int type, X509_NAME *name, X509_OBJECT *ret); int X509_LOOKUP_ctrl(X509_LOOKUP *ctx, int cmd, const char *argc, long argl, char **ret); int X509_load_cert_file(X509_LOOKUP *ctx, const char *file, int type); int X509_load_crl_file(X509_LOOKUP *ctx, const char *file, int type); int X509_load_cert_crl_file(X509_LOOKUP *ctx, const char *file, int type); X509_LOOKUP *X509_LOOKUP_new(X509_LOOKUP_METHOD *method); void X509_LOOKUP_free(X509_LOOKUP *ctx); int X509_LOOKUP_init(X509_LOOKUP *ctx); int X509_LOOKUP_by_subject(X509_LOOKUP *ctx, int type, X509_NAME *name, X509_OBJECT *ret); int X509_LOOKUP_by_issuer_serial(X509_LOOKUP *ctx, int type, X509_NAME *name, ASN1_INTEGER *serial, X509_OBJECT *ret); int X509_LOOKUP_by_fingerprint(X509_LOOKUP *ctx, int type, unsigned char *bytes, int len, X509_OBJECT *ret); int X509_LOOKUP_by_alias(X509_LOOKUP *ctx, int type, char *str, int len, X509_OBJECT *ret); int X509_LOOKUP_shutdown(X509_LOOKUP *ctx); int X509_STORE_load_locations(X509_STORE *ctx, const char *file, const char *dir); int X509_STORE_set_default_paths(X509_STORE *ctx); int X509_STORE_CTX_get_ex_new_index(long argl, void *argp, CRYPTO_EX_new *new_func, CRYPTO_EX_dup *dup_func, CRYPTO_EX_free *free_func); int X509_STORE_CTX_set_ex_data(X509_STORE_CTX *ctx, int idx, void *data); void *X509_STORE_CTX_get_ex_data(X509_STORE_CTX *ctx, int idx); int X509_STORE_CTX_get_error(X509_STORE_CTX *ctx); void X509_STORE_CTX_set_error(X509_STORE_CTX *ctx, int s); int X509_STORE_CTX_get_error_depth(X509_STORE_CTX *ctx); X509 *X509_STORE_CTX_get_current_cert(X509_STORE_CTX *ctx); STACK *X509_STORE_CTX_get_chain(X509_STORE_CTX *ctx); STACK *X509_STORE_CTX_get1_chain(X509_STORE_CTX *ctx); void X509_STORE_CTX_set_cert(X509_STORE_CTX *c, X509 *x); void X509_STORE_CTX_set_chain(X509_STORE_CTX *c, STACK *sk); void X509_STORE_CTX_set0_crls(X509_STORE_CTX *c, STACK *sk); int X509_STORE_CTX_set_purpose(X509_STORE_CTX *ctx, int purpose); int X509_STORE_CTX_set_trust(X509_STORE_CTX *ctx, int trust); int X509_STORE_CTX_purpose_inherit(X509_STORE_CTX *ctx, int def_purpose, int purpose, int trust); void X509_STORE_CTX_set_flags(X509_STORE_CTX *ctx, unsigned long flags); void X509_STORE_CTX_set_time(X509_STORE_CTX *ctx, unsigned long flags, time_t t); void X509_STORE_CTX_set_verify_cb(X509_STORE_CTX *ctx, int (*verify_cb) (int, X509_STORE_CTX *)); X509_POLICY_TREE *X509_STORE_CTX_get0_policy_tree(X509_STORE_CTX *ctx); int X509_STORE_CTX_get_explicit_policy(X509_STORE_CTX *ctx); X509_VERIFY_PARAM *X509_STORE_CTX_get0_param(X509_STORE_CTX *ctx); void X509_STORE_CTX_set0_param(X509_STORE_CTX *ctx, X509_VERIFY_PARAM *param); int X509_STORE_CTX_set_default(X509_STORE_CTX *ctx, const char *name); X509_VERIFY_PARAM *X509_VERIFY_PARAM_new(void); void X509_VERIFY_PARAM_free(X509_VERIFY_PARAM *param); int X509_VERIFY_PARAM_inherit(X509_VERIFY_PARAM *to, const X509_VERIFY_PARAM *from); int X509_VERIFY_PARAM_set1(X509_VERIFY_PARAM *to, const X509_VERIFY_PARAM *from); int X509_VERIFY_PARAM_set1_name(X509_VERIFY_PARAM *param, const char *name); int X509_VERIFY_PARAM_set_flags(X509_VERIFY_PARAM *param, unsigned long flags); int X509_VERIFY_PARAM_clear_flags(X509_VERIFY_PARAM *param, unsigned long flags); unsigned long X509_VERIFY_PARAM_get_flags(X509_VERIFY_PARAM *param); int X509_VERIFY_PARAM_set_purpose(X509_VERIFY_PARAM *param, int purpose); int X509_VERIFY_PARAM_set_trust(X509_VERIFY_PARAM *param, int trust); void X509_VERIFY_PARAM_set_depth(X509_VERIFY_PARAM *param, int depth); void X509_VERIFY_PARAM_set_time(X509_VERIFY_PARAM *param, time_t t); int X509_VERIFY_PARAM_add0_policy(X509_VERIFY_PARAM *param, ASN1_OBJECT *policy); int X509_VERIFY_PARAM_set1_policies(X509_VERIFY_PARAM *param, STACK *policies); int X509_VERIFY_PARAM_get_depth(const X509_VERIFY_PARAM *param); int X509_VERIFY_PARAM_add0_table(X509_VERIFY_PARAM *param); const X509_VERIFY_PARAM *X509_VERIFY_PARAM_lookup(const char *name); void X509_VERIFY_PARAM_table_cleanup(void); int X509_policy_check(X509_POLICY_TREE **ptree, int *pexplicit_policy, STACK *certs, STACK *policy_oids, unsigned int flags); void X509_policy_tree_free(X509_POLICY_TREE *tree); int X509_policy_tree_level_count(const X509_POLICY_TREE *tree); X509_POLICY_LEVEL *X509_policy_tree_get0_level(const X509_POLICY_TREE *tree, int i); STACK *X509_policy_tree_get0_policies(const X509_POLICY_TREE *tree); STACK *X509_policy_tree_get0_user_policies(const X509_POLICY_TREE *tree); int X509_policy_level_node_count(X509_POLICY_LEVEL *level); X509_POLICY_NODE *X509_policy_level_get0_node(X509_POLICY_LEVEL *level, int i); const ASN1_OBJECT *X509_policy_node_get0_policy(const X509_POLICY_NODE *node); STACK *X509_policy_node_get0_qualifiers(const X509_POLICY_NODE *node); const X509_POLICY_NODE *X509_policy_node_get0_parent(const X509_POLICY_NODE *node); #line 545 "/usr/include/openssl/x509.h" #line 1 "/usr/include/openssl/pkcs7.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 65 "/usr/include/openssl/pkcs7.h" #line 1 "/usr/include/openssl/symhacks.h" #line 436 "/usr/include/openssl/symhacks.h" #line 67 "/usr/include/openssl/pkcs7.h" typedef struct pkcs7_issuer_and_serial_st { X509_NAME *issuer; ASN1_INTEGER *serial; } PKCS7_ISSUER_AND_SERIAL; typedef struct pkcs7_signer_info_st { ASN1_INTEGER *version; PKCS7_ISSUER_AND_SERIAL *issuer_and_serial; X509_ALGOR *digest_alg; STACK *auth_attr; X509_ALGOR *digest_enc_alg; ASN1_OCTET_STRING *enc_digest; STACK *unauth_attr; EVP_PKEY *pkey; } PKCS7_SIGNER_INFO; typedef struct pkcs7_recip_info_st { ASN1_INTEGER *version; PKCS7_ISSUER_AND_SERIAL *issuer_and_serial; X509_ALGOR *key_enc_algor; ASN1_OCTET_STRING *enc_key; X509 *cert; } PKCS7_RECIP_INFO; typedef struct pkcs7_signed_st { ASN1_INTEGER *version; STACK *md_algs; STACK *cert; STACK *crl; STACK *signer_info; struct pkcs7_st *contents; } PKCS7_SIGNED; typedef struct pkcs7_enc_content_st { ASN1_OBJECT *content_type; X509_ALGOR *algorithm; ASN1_OCTET_STRING *enc_data; const EVP_CIPHER *cipher; } PKCS7_ENC_CONTENT; typedef struct pkcs7_enveloped_st { ASN1_INTEGER *version; STACK *recipientinfo; PKCS7_ENC_CONTENT *enc_data; } PKCS7_ENVELOPE; typedef struct pkcs7_signedandenveloped_st { ASN1_INTEGER *version; STACK *md_algs; STACK *cert; STACK *crl; STACK *signer_info; PKCS7_ENC_CONTENT *enc_data; STACK *recipientinfo; } PKCS7_SIGN_ENVELOPE; typedef struct pkcs7_digest_st { ASN1_INTEGER *version; X509_ALGOR *md; struct pkcs7_st *contents; ASN1_OCTET_STRING *digest; } PKCS7_DIGEST; typedef struct pkcs7_encrypted_st { ASN1_INTEGER *version; PKCS7_ENC_CONTENT *enc_data; } PKCS7_ENCRYPT; typedef struct pkcs7_st { unsigned char *asn1; long length; int state; int detached; ASN1_OBJECT *type; union { char *ptr; ASN1_OCTET_STRING *data; PKCS7_SIGNED *sign; PKCS7_ENVELOPE *enveloped; PKCS7_SIGN_ENVELOPE *signed_and_enveloped; PKCS7_DIGEST *digest; PKCS7_ENCRYPT *encrypted; ASN1_TYPE *other; } d; } PKCS7; #line 218 "/usr/include/openssl/pkcs7.h" #line 235 "/usr/include/openssl/pkcs7.h" #line 252 "/usr/include/openssl/pkcs7.h" #line 264 "/usr/include/openssl/pkcs7.h" PKCS7_ISSUER_AND_SERIAL *PKCS7_ISSUER_AND_SERIAL_new(void); void PKCS7_ISSUER_AND_SERIAL_free(PKCS7_ISSUER_AND_SERIAL *a); PKCS7_ISSUER_AND_SERIAL *d2i_PKCS7_ISSUER_AND_SERIAL(PKCS7_ISSUER_AND_SERIAL * *a, const unsigned char * *in, long len); int i2d_PKCS7_ISSUER_AND_SERIAL(PKCS7_ISSUER_AND_SERIAL *a, unsigned char * *out); extern const ASN1_ITEM PKCS7_ISSUER_AND_SERIAL_it; int PKCS7_ISSUER_AND_SERIAL_digest(PKCS7_ISSUER_AND_SERIAL *data, const EVP_MD *type, unsigned char *md, unsigned int *len); PKCS7 *d2i_PKCS7_fp(FILE *fp, PKCS7 **p7); int i2d_PKCS7_fp(FILE *fp, PKCS7 *p7); PKCS7 *PKCS7_dup(PKCS7 *p7); PKCS7 *d2i_PKCS7_bio(BIO *bp, PKCS7 **p7); int i2d_PKCS7_bio(BIO *bp, PKCS7 *p7); PKCS7_SIGNER_INFO *PKCS7_SIGNER_INFO_new(void); void PKCS7_SIGNER_INFO_free(PKCS7_SIGNER_INFO *a); PKCS7_SIGNER_INFO *d2i_PKCS7_SIGNER_INFO(PKCS7_SIGNER_INFO * *a, const unsigned char * *in, long len); int i2d_PKCS7_SIGNER_INFO(PKCS7_SIGNER_INFO *a, unsigned char * *out); extern const ASN1_ITEM PKCS7_SIGNER_INFO_it; PKCS7_RECIP_INFO *PKCS7_RECIP_INFO_new(void); void PKCS7_RECIP_INFO_free(PKCS7_RECIP_INFO *a); PKCS7_RECIP_INFO *d2i_PKCS7_RECIP_INFO(PKCS7_RECIP_INFO * *a, const unsigned char * *in, long len); int i2d_PKCS7_RECIP_INFO(PKCS7_RECIP_INFO *a, unsigned char * *out); extern const ASN1_ITEM PKCS7_RECIP_INFO_it; PKCS7_SIGNED *PKCS7_SIGNED_new(void); void PKCS7_SIGNED_free(PKCS7_SIGNED *a); PKCS7_SIGNED *d2i_PKCS7_SIGNED(PKCS7_SIGNED * *a, const unsigned char * *in, long len); int i2d_PKCS7_SIGNED(PKCS7_SIGNED *a, unsigned char * *out); extern const ASN1_ITEM PKCS7_SIGNED_it; PKCS7_ENC_CONTENT *PKCS7_ENC_CONTENT_new(void); void PKCS7_ENC_CONTENT_free(PKCS7_ENC_CONTENT *a); PKCS7_ENC_CONTENT *d2i_PKCS7_ENC_CONTENT(PKCS7_ENC_CONTENT * *a, const unsigned char * *in, long len); int i2d_PKCS7_ENC_CONTENT(PKCS7_ENC_CONTENT *a, unsigned char * *out); extern const ASN1_ITEM PKCS7_ENC_CONTENT_it; PKCS7_ENVELOPE *PKCS7_ENVELOPE_new(void); void PKCS7_ENVELOPE_free(PKCS7_ENVELOPE *a); PKCS7_ENVELOPE *d2i_PKCS7_ENVELOPE(PKCS7_ENVELOPE * *a, const unsigned char * *in, long len); int i2d_PKCS7_ENVELOPE(PKCS7_ENVELOPE *a, unsigned char * *out); extern const ASN1_ITEM PKCS7_ENVELOPE_it; PKCS7_SIGN_ENVELOPE *PKCS7_SIGN_ENVELOPE_new(void); void PKCS7_SIGN_ENVELOPE_free(PKCS7_SIGN_ENVELOPE *a); PKCS7_SIGN_ENVELOPE *d2i_PKCS7_SIGN_ENVELOPE(PKCS7_SIGN_ENVELOPE * *a, const unsigned char * *in, long len); int i2d_PKCS7_SIGN_ENVELOPE(PKCS7_SIGN_ENVELOPE *a, unsigned char * *out); extern const ASN1_ITEM PKCS7_SIGN_ENVELOPE_it; PKCS7_DIGEST *PKCS7_DIGEST_new(void); void PKCS7_DIGEST_free(PKCS7_DIGEST *a); PKCS7_DIGEST *d2i_PKCS7_DIGEST(PKCS7_DIGEST * *a, const unsigned char * *in, long len); int i2d_PKCS7_DIGEST(PKCS7_DIGEST *a, unsigned char * *out); extern const ASN1_ITEM PKCS7_DIGEST_it; PKCS7_ENCRYPT *PKCS7_ENCRYPT_new(void); void PKCS7_ENCRYPT_free(PKCS7_ENCRYPT *a); PKCS7_ENCRYPT *d2i_PKCS7_ENCRYPT(PKCS7_ENCRYPT * *a, const unsigned char * *in, long len); int i2d_PKCS7_ENCRYPT(PKCS7_ENCRYPT *a, unsigned char * *out); extern const ASN1_ITEM PKCS7_ENCRYPT_it; PKCS7 *PKCS7_new(void); void PKCS7_free(PKCS7 *a); PKCS7 *d2i_PKCS7(PKCS7 * *a, const unsigned char * *in, long len); int i2d_PKCS7(PKCS7 *a, unsigned char * *out); extern const ASN1_ITEM PKCS7_it; extern const ASN1_ITEM PKCS7_ATTR_SIGN_it; extern const ASN1_ITEM PKCS7_ATTR_VERIFY_it; int i2d_PKCS7_NDEF(PKCS7 *a, unsigned char * *out); long PKCS7_ctrl(PKCS7 *p7, int cmd, long larg, char *parg); int PKCS7_set_type(PKCS7 *p7, int type); int PKCS7_set0_type_other(PKCS7 *p7, int type, ASN1_TYPE *other); int PKCS7_set_content(PKCS7 *p7, PKCS7 *p7_data); int PKCS7_SIGNER_INFO_set(PKCS7_SIGNER_INFO *p7i, X509 *x509, EVP_PKEY *pkey, const EVP_MD *dgst); int PKCS7_add_signer(PKCS7 *p7, PKCS7_SIGNER_INFO *p7i); int PKCS7_add_certificate(PKCS7 *p7, X509 *x509); int PKCS7_add_crl(PKCS7 *p7, X509_CRL *x509); int PKCS7_content_new(PKCS7 *p7, int nid); int PKCS7_dataVerify(X509_STORE *cert_store, X509_STORE_CTX *ctx, BIO *bio, PKCS7 *p7, PKCS7_SIGNER_INFO *si); int PKCS7_signatureVerify(BIO *bio, PKCS7 *p7, PKCS7_SIGNER_INFO *si, X509 *x509); BIO *PKCS7_dataInit(PKCS7 *p7, BIO *bio); int PKCS7_dataFinal(PKCS7 *p7, BIO *bio); BIO *PKCS7_dataDecode(PKCS7 *p7, EVP_PKEY *pkey, BIO *in_bio, X509 *pcert); PKCS7_SIGNER_INFO *PKCS7_add_signature(PKCS7 *p7, X509 *x509, EVP_PKEY *pkey, const EVP_MD *dgst); X509 *PKCS7_cert_from_signer_info(PKCS7 *p7, PKCS7_SIGNER_INFO *si); int PKCS7_set_digest(PKCS7 *p7, const EVP_MD *md); STACK *PKCS7_get_signer_info(PKCS7 *p7); PKCS7_RECIP_INFO *PKCS7_add_recipient(PKCS7 *p7, X509 *x509); int PKCS7_add_recipient_info(PKCS7 *p7, PKCS7_RECIP_INFO *ri); int PKCS7_RECIP_INFO_set(PKCS7_RECIP_INFO *p7i, X509 *x509); int PKCS7_set_cipher(PKCS7 *p7, const EVP_CIPHER *cipher); PKCS7_ISSUER_AND_SERIAL *PKCS7_get_issuer_and_serial(PKCS7 *p7, int idx); ASN1_OCTET_STRING *PKCS7_digest_from_attributes(STACK *sk); int PKCS7_add_signed_attribute(PKCS7_SIGNER_INFO *p7si, int nid, int type, void *data); int PKCS7_add_attribute(PKCS7_SIGNER_INFO *p7si, int nid, int atrtype, void *value); ASN1_TYPE *PKCS7_get_attribute(PKCS7_SIGNER_INFO *si, int nid); ASN1_TYPE *PKCS7_get_signed_attribute(PKCS7_SIGNER_INFO *si, int nid); int PKCS7_set_signed_attributes(PKCS7_SIGNER_INFO *p7si, STACK *sk); int PKCS7_set_attributes(PKCS7_SIGNER_INFO *p7si, STACK *sk); PKCS7 *PKCS7_sign(X509 *signcert, EVP_PKEY *pkey, STACK *certs, BIO *data, int flags); int PKCS7_verify(PKCS7 *p7, STACK *certs, X509_STORE *store, BIO *indata, BIO *out, int flags); STACK *PKCS7_get0_signers(PKCS7 *p7, STACK *certs, int flags); PKCS7 *PKCS7_encrypt(STACK *certs, BIO *in, const EVP_CIPHER *cipher, int flags); int PKCS7_decrypt(PKCS7 *p7, EVP_PKEY *pkey, X509 *cert, BIO *data, int flags); int PKCS7_add_attrib_smimecap(PKCS7_SIGNER_INFO *si, STACK *cap); STACK *PKCS7_get_smimecap(PKCS7_SIGNER_INFO *si); int PKCS7_simple_smimecap(STACK *sk, int nid, int arg); int SMIME_write_PKCS7(BIO *bio, PKCS7 *p7, BIO *data, int flags); PKCS7 *SMIME_read_PKCS7(BIO *bio, BIO **bcont); int SMIME_crlf_copy(BIO *in, BIO *out, int flags); int SMIME_text(BIO *in, BIO *out); void ERR_load_PKCS7_strings(void); #line 398 "/usr/include/openssl/pkcs7.h" #line 446 "/usr/include/openssl/pkcs7.h" #line 546 "/usr/include/openssl/x509.h" #line 695 "/usr/include/openssl/x509.h" #line 709 "/usr/include/openssl/x509.h" const char *X509_verify_cert_error_string(long n); int X509_verify(X509 *a, EVP_PKEY *r); int X509_REQ_verify(X509_REQ *a, EVP_PKEY *r); int X509_CRL_verify(X509_CRL *a, EVP_PKEY *r); int NETSCAPE_SPKI_verify(NETSCAPE_SPKI *a, EVP_PKEY *r); NETSCAPE_SPKI *NETSCAPE_SPKI_b64_decode(const char *str, int len); char *NETSCAPE_SPKI_b64_encode(NETSCAPE_SPKI *x); EVP_PKEY *NETSCAPE_SPKI_get_pubkey(NETSCAPE_SPKI *x); int NETSCAPE_SPKI_set_pubkey(NETSCAPE_SPKI *x, EVP_PKEY *pkey); int NETSCAPE_SPKI_print(BIO *out, NETSCAPE_SPKI *spki); int X509_signature_print(BIO *bp, X509_ALGOR *alg, ASN1_STRING *sig); int X509_sign(X509 *x, EVP_PKEY *pkey, const EVP_MD *md); int X509_REQ_sign(X509_REQ *x, EVP_PKEY *pkey, const EVP_MD *md); int X509_CRL_sign(X509_CRL *x, EVP_PKEY *pkey, const EVP_MD *md); int NETSCAPE_SPKI_sign(NETSCAPE_SPKI *x, EVP_PKEY *pkey, const EVP_MD *md); int X509_pubkey_digest(const X509 *data, const EVP_MD *type, unsigned char *md, unsigned int *len); int X509_digest(const X509 *data, const EVP_MD *type, unsigned char *md, unsigned int *len); int X509_CRL_digest(const X509_CRL *data, const EVP_MD *type, unsigned char *md, unsigned int *len); int X509_REQ_digest(const X509_REQ *data, const EVP_MD *type, unsigned char *md, unsigned int *len); int X509_NAME_digest(const X509_NAME *data, const EVP_MD *type, unsigned char *md, unsigned int *len); X509 *d2i_X509_fp(FILE *fp, X509 **x509); int i2d_X509_fp(FILE *fp, X509 *x509); X509_CRL *d2i_X509_CRL_fp(FILE *fp, X509_CRL **crl); int i2d_X509_CRL_fp(FILE *fp, X509_CRL *crl); X509_REQ *d2i_X509_REQ_fp(FILE *fp, X509_REQ **req); int i2d_X509_REQ_fp(FILE *fp, X509_REQ *req); RSA *d2i_RSAPrivateKey_fp(FILE *fp, RSA **rsa); int i2d_RSAPrivateKey_fp(FILE *fp, RSA *rsa); RSA *d2i_RSAPublicKey_fp(FILE *fp, RSA **rsa); int i2d_RSAPublicKey_fp(FILE *fp, RSA *rsa); RSA *d2i_RSA_PUBKEY_fp(FILE *fp, RSA **rsa); int i2d_RSA_PUBKEY_fp(FILE *fp, RSA *rsa); DSA *d2i_DSA_PUBKEY_fp(FILE *fp, DSA **dsa); int i2d_DSA_PUBKEY_fp(FILE *fp, DSA *dsa); DSA *d2i_DSAPrivateKey_fp(FILE *fp, DSA **dsa); int i2d_DSAPrivateKey_fp(FILE *fp, DSA *dsa); X509_SIG *d2i_PKCS8_fp(FILE *fp, X509_SIG **p8); int i2d_PKCS8_fp(FILE *fp, X509_SIG *p8); PKCS8_PRIV_KEY_INFO *d2i_PKCS8_PRIV_KEY_INFO_fp(FILE *fp, PKCS8_PRIV_KEY_INFO **p8inf); int i2d_PKCS8_PRIV_KEY_INFO_fp(FILE *fp, PKCS8_PRIV_KEY_INFO *p8inf); int i2d_PKCS8PrivateKeyInfo_fp(FILE *fp, EVP_PKEY *key); int i2d_PrivateKey_fp(FILE *fp, EVP_PKEY *pkey); EVP_PKEY *d2i_PrivateKey_fp(FILE *fp, EVP_PKEY **a); int i2d_PUBKEY_fp(FILE *fp, EVP_PKEY *pkey); EVP_PKEY *d2i_PUBKEY_fp(FILE *fp, EVP_PKEY **a); X509 *d2i_X509_bio(BIO *bp, X509 **x509); int i2d_X509_bio(BIO *bp, X509 *x509); X509_CRL *d2i_X509_CRL_bio(BIO *bp, X509_CRL **crl); int i2d_X509_CRL_bio(BIO *bp, X509_CRL *crl); X509_REQ *d2i_X509_REQ_bio(BIO *bp, X509_REQ **req); int i2d_X509_REQ_bio(BIO *bp, X509_REQ *req); RSA *d2i_RSAPrivateKey_bio(BIO *bp, RSA **rsa); int i2d_RSAPrivateKey_bio(BIO *bp, RSA *rsa); RSA *d2i_RSAPublicKey_bio(BIO *bp, RSA **rsa); int i2d_RSAPublicKey_bio(BIO *bp, RSA *rsa); RSA *d2i_RSA_PUBKEY_bio(BIO *bp, RSA **rsa); int i2d_RSA_PUBKEY_bio(BIO *bp, RSA *rsa); DSA *d2i_DSA_PUBKEY_bio(BIO *bp, DSA **dsa); int i2d_DSA_PUBKEY_bio(BIO *bp, DSA *dsa); DSA *d2i_DSAPrivateKey_bio(BIO *bp, DSA **dsa); int i2d_DSAPrivateKey_bio(BIO *bp, DSA *dsa); X509_SIG *d2i_PKCS8_bio(BIO *bp, X509_SIG **p8); int i2d_PKCS8_bio(BIO *bp, X509_SIG *p8); PKCS8_PRIV_KEY_INFO *d2i_PKCS8_PRIV_KEY_INFO_bio(BIO *bp, PKCS8_PRIV_KEY_INFO **p8inf); int i2d_PKCS8_PRIV_KEY_INFO_bio(BIO *bp, PKCS8_PRIV_KEY_INFO *p8inf); int i2d_PKCS8PrivateKeyInfo_bio(BIO *bp, EVP_PKEY *key); int i2d_PrivateKey_bio(BIO *bp, EVP_PKEY *pkey); EVP_PKEY *d2i_PrivateKey_bio(BIO *bp, EVP_PKEY **a); int i2d_PUBKEY_bio(BIO *bp, EVP_PKEY *pkey); EVP_PKEY *d2i_PUBKEY_bio(BIO *bp, EVP_PKEY **a); X509 *X509_dup(X509 *x509); X509_ATTRIBUTE *X509_ATTRIBUTE_dup(X509_ATTRIBUTE *xa); X509_EXTENSION *X509_EXTENSION_dup(X509_EXTENSION *ex); X509_CRL *X509_CRL_dup(X509_CRL *crl); X509_REQ *X509_REQ_dup(X509_REQ *req); X509_ALGOR *X509_ALGOR_dup(X509_ALGOR *xn); int X509_ALGOR_set0(X509_ALGOR *alg, ASN1_OBJECT *aobj, int ptype, void *pval); void X509_ALGOR_get0(ASN1_OBJECT **paobj, int *pptype, void **ppval, X509_ALGOR *algor); int X509_ALGOR_cmp(const X509_ALGOR *a, const X509_ALGOR *b); X509_NAME *X509_NAME_dup(X509_NAME *xn); X509_NAME_ENTRY *X509_NAME_ENTRY_dup(X509_NAME_ENTRY *ne); int X509_cmp_time(ASN1_TIME *s, time_t *t); int X509_cmp_current_time(ASN1_TIME *s); ASN1_TIME *X509_time_adj(ASN1_TIME *s, long adj, time_t *t); ASN1_TIME *X509_gmtime_adj(ASN1_TIME *s, long adj); const char *X509_get_default_cert_area(void); const char *X509_get_default_cert_dir(void); const char *X509_get_default_cert_file(void); const char *X509_get_default_cert_dir_env(void); const char *X509_get_default_cert_file_env(void); const char *X509_get_default_private_dir(void); X509_REQ *X509_to_X509_REQ(X509 *x, EVP_PKEY *pkey, const EVP_MD *md); X509 *X509_REQ_to_X509(X509_REQ *r, int days, EVP_PKEY *pkey); X509_ALGOR *X509_ALGOR_new(void); void X509_ALGOR_free(X509_ALGOR *a); X509_ALGOR *d2i_X509_ALGOR(X509_ALGOR * *a, const unsigned char * *in, long len); int i2d_X509_ALGOR(X509_ALGOR *a, unsigned char * *out); extern const ASN1_ITEM X509_ALGOR_it; X509_ALGORS *d2i_X509_ALGORS(X509_ALGORS * *a, const unsigned char * *in, long len); int i2d_X509_ALGORS(X509_ALGORS *a, unsigned char * *out); extern const ASN1_ITEM X509_ALGORS_it; X509_VAL *X509_VAL_new(void); void X509_VAL_free(X509_VAL *a); X509_VAL *d2i_X509_VAL(X509_VAL * *a, const unsigned char * *in, long len); int i2d_X509_VAL(X509_VAL *a, unsigned char * *out); extern const ASN1_ITEM X509_VAL_it; X509_PUBKEY *X509_PUBKEY_new(void); void X509_PUBKEY_free(X509_PUBKEY *a); X509_PUBKEY *d2i_X509_PUBKEY(X509_PUBKEY * *a, const unsigned char * *in, long len); int i2d_X509_PUBKEY(X509_PUBKEY *a, unsigned char * *out); extern const ASN1_ITEM X509_PUBKEY_it; int X509_PUBKEY_set(X509_PUBKEY **x, EVP_PKEY *pkey); EVP_PKEY *X509_PUBKEY_get(X509_PUBKEY *key); int X509_get_pubkey_parameters(EVP_PKEY *pkey, STACK *chain); int i2d_PUBKEY(EVP_PKEY *a, unsigned char **pp); EVP_PKEY *d2i_PUBKEY(EVP_PKEY **a, const unsigned char **pp, long length); int i2d_RSA_PUBKEY(RSA *a, unsigned char **pp); RSA *d2i_RSA_PUBKEY(RSA **a, const unsigned char **pp, long length); int i2d_DSA_PUBKEY(DSA *a, unsigned char **pp); DSA *d2i_DSA_PUBKEY(DSA **a, const unsigned char **pp, long length); X509_SIG *X509_SIG_new(void); void X509_SIG_free(X509_SIG *a); X509_SIG *d2i_X509_SIG(X509_SIG * *a, const unsigned char * *in, long len); int i2d_X509_SIG(X509_SIG *a, unsigned char * *out); extern const ASN1_ITEM X509_SIG_it; X509_REQ_INFO *X509_REQ_INFO_new(void); void X509_REQ_INFO_free(X509_REQ_INFO *a); X509_REQ_INFO *d2i_X509_REQ_INFO(X509_REQ_INFO * *a, const unsigned char * *in, long len); int i2d_X509_REQ_INFO(X509_REQ_INFO *a, unsigned char * *out); extern const ASN1_ITEM X509_REQ_INFO_it; X509_REQ *X509_REQ_new(void); void X509_REQ_free(X509_REQ *a); X509_REQ *d2i_X509_REQ(X509_REQ * *a, const unsigned char * *in, long len); int i2d_X509_REQ(X509_REQ *a, unsigned char * *out); extern const ASN1_ITEM X509_REQ_it; X509_ATTRIBUTE *X509_ATTRIBUTE_new(void); void X509_ATTRIBUTE_free(X509_ATTRIBUTE *a); X509_ATTRIBUTE *d2i_X509_ATTRIBUTE(X509_ATTRIBUTE * *a, const unsigned char * *in, long len); int i2d_X509_ATTRIBUTE(X509_ATTRIBUTE *a, unsigned char * *out); extern const ASN1_ITEM X509_ATTRIBUTE_it; X509_ATTRIBUTE *X509_ATTRIBUTE_create(int nid, int atrtype, void *value); X509_EXTENSION *X509_EXTENSION_new(void); void X509_EXTENSION_free(X509_EXTENSION *a); X509_EXTENSION *d2i_X509_EXTENSION(X509_EXTENSION * *a, const unsigned char * *in, long len); int i2d_X509_EXTENSION(X509_EXTENSION *a, unsigned char * *out); extern const ASN1_ITEM X509_EXTENSION_it; X509_EXTENSIONS *d2i_X509_EXTENSIONS(X509_EXTENSIONS * *a, const unsigned char * *in, long len); int i2d_X509_EXTENSIONS(X509_EXTENSIONS *a, unsigned char * *out); extern const ASN1_ITEM X509_EXTENSIONS_it; X509_NAME_ENTRY *X509_NAME_ENTRY_new(void); void X509_NAME_ENTRY_free(X509_NAME_ENTRY *a); X509_NAME_ENTRY *d2i_X509_NAME_ENTRY(X509_NAME_ENTRY * *a, const unsigned char * *in, long len); int i2d_X509_NAME_ENTRY(X509_NAME_ENTRY *a, unsigned char * *out); extern const ASN1_ITEM X509_NAME_ENTRY_it; X509_NAME *X509_NAME_new(void); void X509_NAME_free(X509_NAME *a); X509_NAME *d2i_X509_NAME(X509_NAME * *a, const unsigned char * *in, long len); int i2d_X509_NAME(X509_NAME *a, unsigned char * *out); extern const ASN1_ITEM X509_NAME_it; int X509_NAME_set(X509_NAME **xn, X509_NAME *name); X509_CINF *X509_CINF_new(void); void X509_CINF_free(X509_CINF *a); X509_CINF *d2i_X509_CINF(X509_CINF * *a, const unsigned char * *in, long len); int i2d_X509_CINF(X509_CINF *a, unsigned char * *out); extern const ASN1_ITEM X509_CINF_it; X509 *X509_new(void); void X509_free(X509 *a); X509 *d2i_X509(X509 * *a, const unsigned char * *in, long len); int i2d_X509(X509 *a, unsigned char * *out); extern const ASN1_ITEM X509_it; X509_CERT_AUX *X509_CERT_AUX_new(void); void X509_CERT_AUX_free(X509_CERT_AUX *a); X509_CERT_AUX *d2i_X509_CERT_AUX(X509_CERT_AUX * *a, const unsigned char * *in, long len); int i2d_X509_CERT_AUX(X509_CERT_AUX *a, unsigned char * *out); extern const ASN1_ITEM X509_CERT_AUX_it; X509_CERT_PAIR *X509_CERT_PAIR_new(void); void X509_CERT_PAIR_free(X509_CERT_PAIR *a); X509_CERT_PAIR *d2i_X509_CERT_PAIR(X509_CERT_PAIR * *a, const unsigned char * *in, long len); int i2d_X509_CERT_PAIR(X509_CERT_PAIR *a, unsigned char * *out); extern const ASN1_ITEM X509_CERT_PAIR_it; int X509_get_ex_new_index(long argl, void *argp, CRYPTO_EX_new *new_func, CRYPTO_EX_dup *dup_func, CRYPTO_EX_free *free_func); int X509_set_ex_data(X509 *r, int idx, void *arg); void *X509_get_ex_data(X509 *r, int idx); int i2d_X509_AUX(X509 *a, unsigned char **pp); X509 *d2i_X509_AUX(X509 **a, const unsigned char **pp, long length); int X509_alias_set1(X509 *x, unsigned char *name, int len); int X509_keyid_set1(X509 *x, unsigned char *id, int len); unsigned char *X509_alias_get0(X509 *x, int *len); unsigned char *X509_keyid_get0(X509 *x, int *len); int (*X509_TRUST_set_default(int (*trust) (int, X509 *, int))) (int, X509 *, int); int X509_TRUST_set(int *t, int trust); int X509_add1_trust_object(X509 *x, ASN1_OBJECT *obj); int X509_add1_reject_object(X509 *x, ASN1_OBJECT *obj); void X509_trust_clear(X509 *x); void X509_reject_clear(X509 *x); X509_REVOKED *X509_REVOKED_new(void); void X509_REVOKED_free(X509_REVOKED *a); X509_REVOKED *d2i_X509_REVOKED(X509_REVOKED * *a, const unsigned char * *in, long len); int i2d_X509_REVOKED(X509_REVOKED *a, unsigned char * *out); extern const ASN1_ITEM X509_REVOKED_it; X509_CRL_INFO *X509_CRL_INFO_new(void); void X509_CRL_INFO_free(X509_CRL_INFO *a); X509_CRL_INFO *d2i_X509_CRL_INFO(X509_CRL_INFO * *a, const unsigned char * *in, long len); int i2d_X509_CRL_INFO(X509_CRL_INFO *a, unsigned char * *out); extern const ASN1_ITEM X509_CRL_INFO_it; X509_CRL *X509_CRL_new(void); void X509_CRL_free(X509_CRL *a); X509_CRL *d2i_X509_CRL(X509_CRL * *a, const unsigned char * *in, long len); int i2d_X509_CRL(X509_CRL *a, unsigned char * *out); extern const ASN1_ITEM X509_CRL_it; int X509_CRL_add0_revoked(X509_CRL *crl, X509_REVOKED *rev); X509_PKEY *X509_PKEY_new(void); void X509_PKEY_free(X509_PKEY *a); int i2d_X509_PKEY(X509_PKEY *a, unsigned char **pp); X509_PKEY *d2i_X509_PKEY(X509_PKEY **a, const unsigned char **pp, long length); NETSCAPE_SPKI *NETSCAPE_SPKI_new(void); void NETSCAPE_SPKI_free(NETSCAPE_SPKI *a); NETSCAPE_SPKI *d2i_NETSCAPE_SPKI(NETSCAPE_SPKI * *a, const unsigned char * *in, long len); int i2d_NETSCAPE_SPKI(NETSCAPE_SPKI *a, unsigned char * *out); extern const ASN1_ITEM NETSCAPE_SPKI_it; NETSCAPE_SPKAC *NETSCAPE_SPKAC_new(void); void NETSCAPE_SPKAC_free(NETSCAPE_SPKAC *a); NETSCAPE_SPKAC *d2i_NETSCAPE_SPKAC(NETSCAPE_SPKAC * *a, const unsigned char * *in, long len); int i2d_NETSCAPE_SPKAC(NETSCAPE_SPKAC *a, unsigned char * *out); extern const ASN1_ITEM NETSCAPE_SPKAC_it; NETSCAPE_CERT_SEQUENCE *NETSCAPE_CERT_SEQUENCE_new(void); void NETSCAPE_CERT_SEQUENCE_free(NETSCAPE_CERT_SEQUENCE *a); NETSCAPE_CERT_SEQUENCE *d2i_NETSCAPE_CERT_SEQUENCE(NETSCAPE_CERT_SEQUENCE * *a, const unsigned char * *in, long len); int i2d_NETSCAPE_CERT_SEQUENCE(NETSCAPE_CERT_SEQUENCE *a, unsigned char * *out); extern const ASN1_ITEM NETSCAPE_CERT_SEQUENCE_it; X509_INFO *X509_INFO_new(void); void X509_INFO_free(X509_INFO *a); char *X509_NAME_oneline(X509_NAME *a, char *buf, int size); int ASN1_verify(i2d_of_void *i2d, X509_ALGOR *algor1, ASN1_BIT_STRING *signature, char *data, EVP_PKEY *pkey); int ASN1_digest(i2d_of_void *i2d, const EVP_MD *type, char *data, unsigned char *md, unsigned int *len); int ASN1_sign(i2d_of_void *i2d, X509_ALGOR *algor1, X509_ALGOR *algor2, ASN1_BIT_STRING *signature, char *data, EVP_PKEY *pkey, const EVP_MD *type); int ASN1_item_digest(const ASN1_ITEM *it, const EVP_MD *type, void *data, unsigned char *md, unsigned int *len); int ASN1_item_verify(const ASN1_ITEM *it, X509_ALGOR *algor1, ASN1_BIT_STRING *signature, void *data, EVP_PKEY *pkey); int ASN1_item_sign(const ASN1_ITEM *it, X509_ALGOR *algor1, X509_ALGOR *algor2, ASN1_BIT_STRING *signature, void *data, EVP_PKEY *pkey, const EVP_MD *type); int X509_set_version(X509 *x, long version); int X509_set_serialNumber(X509 *x, ASN1_INTEGER *serial); ASN1_INTEGER *X509_get_serialNumber(X509 *x); int X509_set_issuer_name(X509 *x, X509_NAME *name); X509_NAME *X509_get_issuer_name(X509 *a); int X509_set_subject_name(X509 *x, X509_NAME *name); X509_NAME *X509_get_subject_name(X509 *a); int X509_set_notBefore(X509 *x, ASN1_TIME *tm); int X509_set_notAfter(X509 *x, ASN1_TIME *tm); int X509_set_pubkey(X509 *x, EVP_PKEY *pkey); EVP_PKEY *X509_get_pubkey(X509 *x); ASN1_BIT_STRING *X509_get0_pubkey_bitstr(const X509 *x); int X509_certificate_type(X509 *x, EVP_PKEY *pubkey ); int X509_REQ_set_version(X509_REQ *x, long version); int X509_REQ_set_subject_name(X509_REQ *req, X509_NAME *name); int X509_REQ_set_pubkey(X509_REQ *x, EVP_PKEY *pkey); EVP_PKEY *X509_REQ_get_pubkey(X509_REQ *req); int X509_REQ_extension_nid(int nid); int *X509_REQ_get_extension_nids(void); void X509_REQ_set_extension_nids(int *nids); STACK *X509_REQ_get_extensions(X509_REQ *req); int X509_REQ_add_extensions_nid(X509_REQ *req, STACK *exts, int nid); int X509_REQ_add_extensions(X509_REQ *req, STACK *exts); int X509_REQ_get_attr_count(const X509_REQ *req); int X509_REQ_get_attr_by_NID(const X509_REQ *req, int nid, int lastpos); int X509_REQ_get_attr_by_OBJ(const X509_REQ *req, ASN1_OBJECT *obj, int lastpos); X509_ATTRIBUTE *X509_REQ_get_attr(const X509_REQ *req, int loc); X509_ATTRIBUTE *X509_REQ_delete_attr(X509_REQ *req, int loc); int X509_REQ_add1_attr(X509_REQ *req, X509_ATTRIBUTE *attr); int X509_REQ_add1_attr_by_OBJ(X509_REQ *req, const ASN1_OBJECT *obj, int type, const unsigned char *bytes, int len); int X509_REQ_add1_attr_by_NID(X509_REQ *req, int nid, int type, const unsigned char *bytes, int len); int X509_REQ_add1_attr_by_txt(X509_REQ *req, const char *attrname, int type, const unsigned char *bytes, int len); int X509_CRL_set_version(X509_CRL *x, long version); int X509_CRL_set_issuer_name(X509_CRL *x, X509_NAME *name); int X509_CRL_set_lastUpdate(X509_CRL *x, ASN1_TIME *tm); int X509_CRL_set_nextUpdate(X509_CRL *x, ASN1_TIME *tm); int X509_CRL_sort(X509_CRL *crl); int X509_REVOKED_set_serialNumber(X509_REVOKED *x, ASN1_INTEGER *serial); int X509_REVOKED_set_revocationDate(X509_REVOKED *r, ASN1_TIME *tm); int X509_REQ_check_private_key(X509_REQ *x509, EVP_PKEY *pkey); int X509_check_private_key(X509 *x509, EVP_PKEY *pkey); int X509_issuer_and_serial_cmp(const X509 *a, const X509 *b); unsigned long X509_issuer_and_serial_hash(X509 *a); int X509_issuer_name_cmp(const X509 *a, const X509 *b); unsigned long X509_issuer_name_hash(X509 *a); int X509_subject_name_cmp(const X509 *a, const X509 *b); unsigned long X509_subject_name_hash(X509 *x); int X509_cmp(const X509 *a, const X509 *b); int X509_NAME_cmp(const X509_NAME *a, const X509_NAME *b); unsigned long X509_NAME_hash(X509_NAME *x); int X509_CRL_cmp(const X509_CRL *a, const X509_CRL *b); int X509_print_ex_fp(FILE *bp, X509 *x, unsigned long nmflag, unsigned long cflag); int X509_print_fp(FILE *bp, X509 *x); int X509_CRL_print_fp(FILE *bp, X509_CRL *x); int X509_REQ_print_fp(FILE *bp, X509_REQ *req); int X509_NAME_print_ex_fp(FILE *fp, X509_NAME *nm, int indent, unsigned long flags); int X509_NAME_print(BIO *bp, X509_NAME *name, int obase); int X509_NAME_print_ex(BIO *out, X509_NAME *nm, int indent, unsigned long flags); int X509_print_ex(BIO *bp, X509 *x, unsigned long nmflag, unsigned long cflag); int X509_print(BIO *bp, X509 *x); int X509_ocspid_print(BIO *bp, X509 *x); int X509_CERT_AUX_print(BIO *bp, X509_CERT_AUX *x, int indent); int X509_CRL_print(BIO *bp, X509_CRL *x); int X509_REQ_print_ex(BIO *bp, X509_REQ *x, unsigned long nmflag, unsigned long cflag); int X509_REQ_print(BIO *bp, X509_REQ *req); int X509_NAME_entry_count(X509_NAME *name); int X509_NAME_get_text_by_NID(X509_NAME *name, int nid, char *buf, int len); int X509_NAME_get_text_by_OBJ(X509_NAME *name, ASN1_OBJECT *obj, char *buf, int len); int X509_NAME_get_index_by_NID(X509_NAME *name, int nid, int lastpos); int X509_NAME_get_index_by_OBJ(X509_NAME *name, ASN1_OBJECT *obj, int lastpos); X509_NAME_ENTRY *X509_NAME_get_entry(X509_NAME *name, int loc); X509_NAME_ENTRY *X509_NAME_delete_entry(X509_NAME *name, int loc); int X509_NAME_add_entry(X509_NAME *name, X509_NAME_ENTRY *ne, int loc, int set); int X509_NAME_add_entry_by_OBJ(X509_NAME *name, ASN1_OBJECT *obj, int type, unsigned char *bytes, int len, int loc, int set); int X509_NAME_add_entry_by_NID(X509_NAME *name, int nid, int type, unsigned char *bytes, int len, int loc, int set); X509_NAME_ENTRY *X509_NAME_ENTRY_create_by_txt(X509_NAME_ENTRY **ne, const char *field, int type, const unsigned char *bytes, int len); X509_NAME_ENTRY *X509_NAME_ENTRY_create_by_NID(X509_NAME_ENTRY **ne, int nid, int type, unsigned char *bytes, int len); int X509_NAME_add_entry_by_txt(X509_NAME *name, const char *field, int type, const unsigned char *bytes, int len, int loc, int set); X509_NAME_ENTRY *X509_NAME_ENTRY_create_by_OBJ(X509_NAME_ENTRY **ne, ASN1_OBJECT *obj, int type, const unsigned char *bytes, int len); int X509_NAME_ENTRY_set_object(X509_NAME_ENTRY *ne, ASN1_OBJECT *obj); int X509_NAME_ENTRY_set_data(X509_NAME_ENTRY *ne, int type, const unsigned char *bytes, int len); ASN1_OBJECT *X509_NAME_ENTRY_get_object(X509_NAME_ENTRY *ne); ASN1_STRING *X509_NAME_ENTRY_get_data(X509_NAME_ENTRY *ne); int X509v3_get_ext_count(const STACK *x); int X509v3_get_ext_by_NID(const STACK *x, int nid, int lastpos); int X509v3_get_ext_by_OBJ(const STACK *x, ASN1_OBJECT *obj, int lastpos); int X509v3_get_ext_by_critical(const STACK *x, int crit, int lastpos); X509_EXTENSION *X509v3_get_ext(const STACK *x, int loc); X509_EXTENSION *X509v3_delete_ext(STACK *x, int loc); STACK *X509v3_add_ext(STACK **x, X509_EXTENSION *ex, int loc); int X509_get_ext_count(X509 *x); int X509_get_ext_by_NID(X509 *x, int nid, int lastpos); int X509_get_ext_by_OBJ(X509 *x, ASN1_OBJECT *obj, int lastpos); int X509_get_ext_by_critical(X509 *x, int crit, int lastpos); X509_EXTENSION *X509_get_ext(X509 *x, int loc); X509_EXTENSION *X509_delete_ext(X509 *x, int loc); int X509_add_ext(X509 *x, X509_EXTENSION *ex, int loc); void *X509_get_ext_d2i(X509 *x, int nid, int *crit, int *idx); int X509_add1_ext_i2d(X509 *x, int nid, void *value, int crit, unsigned long flags); int X509_CRL_get_ext_count(X509_CRL *x); int X509_CRL_get_ext_by_NID(X509_CRL *x, int nid, int lastpos); int X509_CRL_get_ext_by_OBJ(X509_CRL *x, ASN1_OBJECT *obj, int lastpos); int X509_CRL_get_ext_by_critical(X509_CRL *x, int crit, int lastpos); X509_EXTENSION *X509_CRL_get_ext(X509_CRL *x, int loc); X509_EXTENSION *X509_CRL_delete_ext(X509_CRL *x, int loc); int X509_CRL_add_ext(X509_CRL *x, X509_EXTENSION *ex, int loc); void *X509_CRL_get_ext_d2i(X509_CRL *x, int nid, int *crit, int *idx); int X509_CRL_add1_ext_i2d(X509_CRL *x, int nid, void *value, int crit, unsigned long flags); int X509_REVOKED_get_ext_count(X509_REVOKED *x); int X509_REVOKED_get_ext_by_NID(X509_REVOKED *x, int nid, int lastpos); int X509_REVOKED_get_ext_by_OBJ(X509_REVOKED *x, ASN1_OBJECT *obj, int lastpos); int X509_REVOKED_get_ext_by_critical(X509_REVOKED *x, int crit, int lastpos); X509_EXTENSION *X509_REVOKED_get_ext(X509_REVOKED *x, int loc); X509_EXTENSION *X509_REVOKED_delete_ext(X509_REVOKED *x, int loc); int X509_REVOKED_add_ext(X509_REVOKED *x, X509_EXTENSION *ex, int loc); void *X509_REVOKED_get_ext_d2i(X509_REVOKED *x, int nid, int *crit, int *idx); int X509_REVOKED_add1_ext_i2d(X509_REVOKED *x, int nid, void *value, int crit, unsigned long flags); X509_EXTENSION *X509_EXTENSION_create_by_NID(X509_EXTENSION **ex, int nid, int crit, ASN1_OCTET_STRING *data); X509_EXTENSION *X509_EXTENSION_create_by_OBJ(X509_EXTENSION **ex, ASN1_OBJECT *obj, int crit, ASN1_OCTET_STRING *data); int X509_EXTENSION_set_object(X509_EXTENSION *ex, ASN1_OBJECT *obj); int X509_EXTENSION_set_critical(X509_EXTENSION *ex, int crit); int X509_EXTENSION_set_data(X509_EXTENSION *ex, ASN1_OCTET_STRING *data); ASN1_OBJECT *X509_EXTENSION_get_object(X509_EXTENSION *ex); ASN1_OCTET_STRING *X509_EXTENSION_get_data(X509_EXTENSION *ne); int X509_EXTENSION_get_critical(X509_EXTENSION *ex); int X509at_get_attr_count(const STACK *x); int X509at_get_attr_by_NID(const STACK *x, int nid, int lastpos); int X509at_get_attr_by_OBJ(const STACK *sk, ASN1_OBJECT *obj, int lastpos); X509_ATTRIBUTE *X509at_get_attr(const STACK *x, int loc); X509_ATTRIBUTE *X509at_delete_attr(STACK *x, int loc); STACK *X509at_add1_attr(STACK **x, X509_ATTRIBUTE *attr); STACK *X509at_add1_attr_by_OBJ(STACK **x, const ASN1_OBJECT *obj, int type, const unsigned char *bytes, int len); STACK *X509at_add1_attr_by_NID(STACK **x, int nid, int type, const unsigned char *bytes, int len); STACK *X509at_add1_attr_by_txt(STACK **x, const char *attrname, int type, const unsigned char *bytes, int len); void *X509at_get0_data_by_OBJ(STACK *x, ASN1_OBJECT *obj, int lastpos, int type); X509_ATTRIBUTE *X509_ATTRIBUTE_create_by_NID(X509_ATTRIBUTE **attr, int nid, int atrtype, const void *data, int len); X509_ATTRIBUTE *X509_ATTRIBUTE_create_by_OBJ(X509_ATTRIBUTE **attr, const ASN1_OBJECT *obj, int atrtype, const void *data, int len); X509_ATTRIBUTE *X509_ATTRIBUTE_create_by_txt(X509_ATTRIBUTE **attr, const char *atrname, int type, const unsigned char *bytes, int len); int X509_ATTRIBUTE_set1_object(X509_ATTRIBUTE *attr, const ASN1_OBJECT *obj); int X509_ATTRIBUTE_set1_data(X509_ATTRIBUTE *attr, int attrtype, const void *data, int len); void *X509_ATTRIBUTE_get0_data(X509_ATTRIBUTE *attr, int idx, int atrtype, void *data); int X509_ATTRIBUTE_count(X509_ATTRIBUTE *attr); ASN1_OBJECT *X509_ATTRIBUTE_get0_object(X509_ATTRIBUTE *attr); ASN1_TYPE *X509_ATTRIBUTE_get0_type(X509_ATTRIBUTE *attr, int idx); int EVP_PKEY_get_attr_count(const EVP_PKEY *key); int EVP_PKEY_get_attr_by_NID(const EVP_PKEY *key, int nid, int lastpos); int EVP_PKEY_get_attr_by_OBJ(const EVP_PKEY *key, ASN1_OBJECT *obj, int lastpos); X509_ATTRIBUTE *EVP_PKEY_get_attr(const EVP_PKEY *key, int loc); X509_ATTRIBUTE *EVP_PKEY_delete_attr(EVP_PKEY *key, int loc); int EVP_PKEY_add1_attr(EVP_PKEY *key, X509_ATTRIBUTE *attr); int EVP_PKEY_add1_attr_by_OBJ(EVP_PKEY *key, const ASN1_OBJECT *obj, int type, const unsigned char *bytes, int len); int EVP_PKEY_add1_attr_by_NID(EVP_PKEY *key, int nid, int type, const unsigned char *bytes, int len); int EVP_PKEY_add1_attr_by_txt(EVP_PKEY *key, const char *attrname, int type, const unsigned char *bytes, int len); int X509_verify_cert(X509_STORE_CTX *ctx); X509 *X509_find_by_issuer_and_serial(STACK *sk, X509_NAME *name, ASN1_INTEGER *serial); X509 *X509_find_by_subject(STACK *sk, X509_NAME *name); PBEPARAM *PBEPARAM_new(void); void PBEPARAM_free(PBEPARAM *a); PBEPARAM *d2i_PBEPARAM(PBEPARAM * *a, const unsigned char * *in, long len); int i2d_PBEPARAM(PBEPARAM *a, unsigned char * *out); extern const ASN1_ITEM PBEPARAM_it; PBE2PARAM *PBE2PARAM_new(void); void PBE2PARAM_free(PBE2PARAM *a); PBE2PARAM *d2i_PBE2PARAM(PBE2PARAM * *a, const unsigned char * *in, long len); int i2d_PBE2PARAM(PBE2PARAM *a, unsigned char * *out); extern const ASN1_ITEM PBE2PARAM_it; PBKDF2PARAM *PBKDF2PARAM_new(void); void PBKDF2PARAM_free(PBKDF2PARAM *a); PBKDF2PARAM *d2i_PBKDF2PARAM(PBKDF2PARAM * *a, const unsigned char * *in, long len); int i2d_PBKDF2PARAM(PBKDF2PARAM *a, unsigned char * *out); extern const ASN1_ITEM PBKDF2PARAM_it; X509_ALGOR *PKCS5_pbe_set(int alg, int iter, unsigned char *salt, int saltlen); X509_ALGOR *PKCS5_pbe2_set(const EVP_CIPHER *cipher, int iter, unsigned char *salt, int saltlen); PKCS8_PRIV_KEY_INFO *PKCS8_PRIV_KEY_INFO_new(void); void PKCS8_PRIV_KEY_INFO_free(PKCS8_PRIV_KEY_INFO *a); PKCS8_PRIV_KEY_INFO *d2i_PKCS8_PRIV_KEY_INFO(PKCS8_PRIV_KEY_INFO * *a, const unsigned char * *in, long len); int i2d_PKCS8_PRIV_KEY_INFO(PKCS8_PRIV_KEY_INFO *a, unsigned char * *out); extern const ASN1_ITEM PKCS8_PRIV_KEY_INFO_it; EVP_PKEY *EVP_PKCS82PKEY(PKCS8_PRIV_KEY_INFO *p8); PKCS8_PRIV_KEY_INFO *EVP_PKEY2PKCS8(EVP_PKEY *pkey); PKCS8_PRIV_KEY_INFO *EVP_PKEY2PKCS8_broken(EVP_PKEY *pkey, int broken); PKCS8_PRIV_KEY_INFO *PKCS8_set_broken(PKCS8_PRIV_KEY_INFO *p8, int broken); int X509_check_trust(X509 *x, int id, int flags); int X509_TRUST_get_count(void); X509_TRUST *X509_TRUST_get0(int idx); int X509_TRUST_get_by_id(int id); int X509_TRUST_add(int id, int flags, int (*ck) (X509_TRUST *, X509 *, int), char *name, int arg1, void *arg2); void X509_TRUST_cleanup(void); int X509_TRUST_get_flags(X509_TRUST *xp); char *X509_TRUST_get0_name(X509_TRUST *xp); int X509_TRUST_get_trust(X509_TRUST *xp); void ERR_load_X509_strings(void); #line 1308 "/usr/include/openssl/x509.h" #line 1333 "/usr/include/openssl/x509.h" #line 184 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/pem.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 63 "/usr/include/openssl/pem.h" #line 1 "/usr/include/openssl/pem2.h" #line 72 "/usr/include/openssl/pem.h" #line 97 "/usr/include/openssl/pem.h" #line 106 "/usr/include/openssl/pem.h" #line 113 "/usr/include/openssl/pem.h" #line 138 "/usr/include/openssl/pem.h" typedef struct PEM_Encode_Seal_st { EVP_ENCODE_CTX encode; EVP_MD_CTX md; EVP_CIPHER_CTX cipher; } PEM_ENCODE_SEAL_CTX; typedef struct pem_recip_st { char *name; X509_NAME *dn; int cipher; int key_enc; } PEM_USER; typedef struct pem_ctx_st { int type; struct { int version; int mode; } proc_type; char *domain; struct { int cipher; } DEK_info; PEM_USER *originator; int num_recipient; PEM_USER **recipient; STACK *x509_chain; EVP_MD *md; int md_enc; int md_len; char *md_data; EVP_CIPHER *dec; int key_len; unsigned char *key; int data_enc; int data_len; unsigned char *data; } PEM_CTX; #line 221 "/usr/include/openssl/pem.h" #line 230 "/usr/include/openssl/pem.h" #line 239 "/usr/include/openssl/pem.h" #line 248 "/usr/include/openssl/pem.h" #line 259 "/usr/include/openssl/pem.h" #line 270 "/usr/include/openssl/pem.h" #line 281 "/usr/include/openssl/pem.h" #line 290 "/usr/include/openssl/pem.h" #line 299 "/usr/include/openssl/pem.h" #line 309 "/usr/include/openssl/pem.h" #line 319 "/usr/include/openssl/pem.h" #line 361 "/usr/include/openssl/pem.h" #line 541 "/usr/include/openssl/pem.h" typedef int pem_password_cb (char *buf, int size, int rwflag, void *userdata); int PEM_get_EVP_CIPHER_INFO(char *header, EVP_CIPHER_INFO *cipher); int PEM_do_header(EVP_CIPHER_INFO *cipher, unsigned char *data, long *len, pem_password_cb *callback, void *u); int PEM_read_bio(BIO *bp, char **name, char **header, unsigned char **data, long *len); int PEM_write_bio(BIO *bp, const char *name, char *hdr, unsigned char *data, long len); int PEM_bytes_read_bio(unsigned char **pdata, long *plen, char **pnm, const char *name, BIO *bp, pem_password_cb *cb, void *u); void *PEM_ASN1_read_bio(d2i_of_void *d2i, const char *name, BIO *bp, void **x, pem_password_cb *cb, void *u); int PEM_ASN1_write_bio(i2d_of_void *i2d, const char *name, BIO *bp, char *x, const EVP_CIPHER *enc, unsigned char *kstr, int klen, pem_password_cb *cb, void *u); STACK *PEM_X509_INFO_read_bio(BIO *bp, STACK *sk, pem_password_cb *cb, void *u); int PEM_X509_INFO_write_bio(BIO *bp, X509_INFO *xi, EVP_CIPHER *enc, unsigned char *kstr, int klen, pem_password_cb *cd, void *u); int PEM_read(FILE *fp, char **name, char **header, unsigned char **data, long *len); int PEM_write(FILE *fp, char *name, char *hdr, unsigned char *data, long len); void *PEM_ASN1_read(d2i_of_void *d2i, const char *name, FILE *fp, void **x, pem_password_cb *cb, void *u); int PEM_ASN1_write(i2d_of_void *i2d, const char *name, FILE *fp, char *x, const EVP_CIPHER *enc, unsigned char *kstr, int klen, pem_password_cb *callback, void *u); STACK *PEM_X509_INFO_read(FILE *fp, STACK *sk, pem_password_cb *cb, void *u); int PEM_SealInit(PEM_ENCODE_SEAL_CTX *ctx, EVP_CIPHER *type, EVP_MD *md_type, unsigned char **ek, int *ekl, unsigned char *iv, EVP_PKEY **pubk, int npubk); void PEM_SealUpdate(PEM_ENCODE_SEAL_CTX *ctx, unsigned char *out, int *outl, unsigned char *in, int inl); int PEM_SealFinal(PEM_ENCODE_SEAL_CTX *ctx, unsigned char *sig, int *sigl, unsigned char *out, int *outl, EVP_PKEY *priv); void PEM_SignInit(EVP_MD_CTX *ctx, EVP_MD *type); void PEM_SignUpdate(EVP_MD_CTX *ctx, unsigned char *d, unsigned int cnt); int PEM_SignFinal(EVP_MD_CTX *ctx, unsigned char *sigret, unsigned int *siglen, EVP_PKEY *pkey); int PEM_def_callback(char *buf, int num, int w, void *key); void PEM_proc_type(char *buf, int type); void PEM_dek_info(char *buf, const char *type, int len, char *str); #line 1 "/usr/include/openssl/symhacks.h" #line 436 "/usr/include/openssl/symhacks.h" #line 619 "/usr/include/openssl/pem.h" X509 *PEM_read_bio_X509(BIO *bp, X509 * *x, pem_password_cb *cb, void *u); X509 *PEM_read_X509(FILE *fp, X509 * *x, pem_password_cb *cb, void *u); int PEM_write_bio_X509(BIO *bp, X509 *x); int PEM_write_X509(FILE *fp, X509 *x); X509 *PEM_read_bio_X509_AUX(BIO *bp, X509 * *x, pem_password_cb *cb, void *u); X509 *PEM_read_X509_AUX(FILE *fp, X509 * *x, pem_password_cb *cb, void *u); int PEM_write_bio_X509_AUX(BIO *bp, X509 *x); int PEM_write_X509_AUX(FILE *fp, X509 *x); X509_CERT_PAIR *PEM_read_bio_X509_CERT_PAIR(BIO *bp, X509_CERT_PAIR * *x, pem_password_cb *cb, void *u); X509_CERT_PAIR *PEM_read_X509_CERT_PAIR(FILE *fp, X509_CERT_PAIR * *x, pem_password_cb *cb, void *u); int PEM_write_bio_X509_CERT_PAIR(BIO *bp, X509_CERT_PAIR *x); int PEM_write_X509_CERT_PAIR(FILE *fp, X509_CERT_PAIR *x); X509_REQ *PEM_read_bio_X509_REQ(BIO *bp, X509_REQ * *x, pem_password_cb *cb, void *u); X509_REQ *PEM_read_X509_REQ(FILE *fp, X509_REQ * *x, pem_password_cb *cb, void *u); int PEM_write_bio_X509_REQ(BIO *bp, X509_REQ *x); int PEM_write_X509_REQ(FILE *fp, X509_REQ *x); int PEM_write_bio_X509_REQ_NEW(BIO *bp, X509_REQ *x); int PEM_write_X509_REQ_NEW(FILE *fp, X509_REQ *x); X509_CRL *PEM_read_bio_X509_CRL(BIO *bp, X509_CRL * *x, pem_password_cb *cb, void *u); X509_CRL *PEM_read_X509_CRL(FILE *fp, X509_CRL * *x, pem_password_cb *cb, void *u); int PEM_write_bio_X509_CRL(BIO *bp, X509_CRL *x); int PEM_write_X509_CRL(FILE *fp, X509_CRL *x); PKCS7 *PEM_read_bio_PKCS7(BIO *bp, PKCS7 * *x, pem_password_cb *cb, void *u); PKCS7 *PEM_read_PKCS7(FILE *fp, PKCS7 * *x, pem_password_cb *cb, void *u); int PEM_write_bio_PKCS7(BIO *bp, PKCS7 *x); int PEM_write_PKCS7(FILE *fp, PKCS7 *x); NETSCAPE_CERT_SEQUENCE *PEM_read_bio_NETSCAPE_CERT_SEQUENCE(BIO *bp, NETSCAPE_CERT_SEQUENCE * *x, pem_password_cb *cb, void *u); NETSCAPE_CERT_SEQUENCE *PEM_read_NETSCAPE_CERT_SEQUENCE(FILE *fp, NETSCAPE_CERT_SEQUENCE * *x, pem_password_cb *cb, void *u); int PEM_write_bio_NETSCAPE_CERT_SEQUENCE(BIO *bp, NETSCAPE_CERT_SEQUENCE *x); int PEM_write_NETSCAPE_CERT_SEQUENCE(FILE *fp, NETSCAPE_CERT_SEQUENCE *x); X509_SIG *PEM_read_bio_PKCS8(BIO *bp, X509_SIG * *x, pem_password_cb *cb, void *u); X509_SIG *PEM_read_PKCS8(FILE *fp, X509_SIG * *x, pem_password_cb *cb, void *u); int PEM_write_bio_PKCS8(BIO *bp, X509_SIG *x); int PEM_write_PKCS8(FILE *fp, X509_SIG *x); PKCS8_PRIV_KEY_INFO *PEM_read_bio_PKCS8_PRIV_KEY_INFO(BIO *bp, PKCS8_PRIV_KEY_INFO * *x, pem_password_cb *cb, void *u); PKCS8_PRIV_KEY_INFO *PEM_read_PKCS8_PRIV_KEY_INFO(FILE *fp, PKCS8_PRIV_KEY_INFO * *x, pem_password_cb *cb, void *u); int PEM_write_bio_PKCS8_PRIV_KEY_INFO(BIO *bp, PKCS8_PRIV_KEY_INFO *x); int PEM_write_PKCS8_PRIV_KEY_INFO(FILE *fp, PKCS8_PRIV_KEY_INFO *x); RSA *PEM_read_bio_RSAPrivateKey(BIO *bp, RSA * *x, pem_password_cb *cb, void *u); RSA *PEM_read_RSAPrivateKey(FILE *fp, RSA * *x, pem_password_cb *cb, void *u); int PEM_write_bio_RSAPrivateKey(BIO *bp, RSA *x, const EVP_CIPHER *enc, unsigned char *kstr, int klen, pem_password_cb *cb, void *u); int PEM_write_RSAPrivateKey(FILE *fp, RSA *x, const EVP_CIPHER *enc, unsigned char *kstr, int klen, pem_password_cb *cb, void *u); RSA *PEM_read_bio_RSAPublicKey(BIO *bp, RSA * *x, pem_password_cb *cb, void *u); RSA *PEM_read_RSAPublicKey(FILE *fp, RSA * *x, pem_password_cb *cb, void *u); int PEM_write_bio_RSAPublicKey(BIO *bp, const RSA *x); int PEM_write_RSAPublicKey(FILE *fp, const RSA *x); RSA *PEM_read_bio_RSA_PUBKEY(BIO *bp, RSA * *x, pem_password_cb *cb, void *u); RSA *PEM_read_RSA_PUBKEY(FILE *fp, RSA * *x, pem_password_cb *cb, void *u); int PEM_write_bio_RSA_PUBKEY(BIO *bp, RSA *x); int PEM_write_RSA_PUBKEY(FILE *fp, RSA *x); DSA *PEM_read_bio_DSAPrivateKey(BIO *bp, DSA * *x, pem_password_cb *cb, void *u); DSA *PEM_read_DSAPrivateKey(FILE *fp, DSA * *x, pem_password_cb *cb, void *u); int PEM_write_bio_DSAPrivateKey(BIO *bp, DSA *x, const EVP_CIPHER *enc, unsigned char *kstr, int klen, pem_password_cb *cb, void *u); int PEM_write_DSAPrivateKey(FILE *fp, DSA *x, const EVP_CIPHER *enc, unsigned char *kstr, int klen, pem_password_cb *cb, void *u); DSA *PEM_read_bio_DSA_PUBKEY(BIO *bp, DSA * *x, pem_password_cb *cb, void *u); DSA *PEM_read_DSA_PUBKEY(FILE *fp, DSA * *x, pem_password_cb *cb, void *u); int PEM_write_bio_DSA_PUBKEY(BIO *bp, DSA *x); int PEM_write_DSA_PUBKEY(FILE *fp, DSA *x); DSA *PEM_read_bio_DSAparams(BIO *bp, DSA * *x, pem_password_cb *cb, void *u); DSA *PEM_read_DSAparams(FILE *fp, DSA * *x, pem_password_cb *cb, void *u); int PEM_write_bio_DSAparams(BIO *bp, const DSA *x); int PEM_write_DSAparams(FILE *fp, const DSA *x); DH *PEM_read_bio_DHparams(BIO *bp, DH * *x, pem_password_cb *cb, void *u); DH *PEM_read_DHparams(FILE *fp, DH * *x, pem_password_cb *cb, void *u); int PEM_write_bio_DHparams(BIO *bp, const DH *x); int PEM_write_DHparams(FILE *fp, const DH *x); EVP_PKEY *PEM_read_bio_PrivateKey(BIO *bp, EVP_PKEY * *x, pem_password_cb *cb, void *u); EVP_PKEY *PEM_read_PrivateKey(FILE *fp, EVP_PKEY * *x, pem_password_cb *cb, void *u); int PEM_write_bio_PrivateKey(BIO *bp, EVP_PKEY *x, const EVP_CIPHER *enc, unsigned char *kstr, int klen, pem_password_cb *cb, void *u); int PEM_write_PrivateKey(FILE *fp, EVP_PKEY *x, const EVP_CIPHER *enc, unsigned char *kstr, int klen, pem_password_cb *cb, void *u); EVP_PKEY *PEM_read_bio_PUBKEY(BIO *bp, EVP_PKEY * *x, pem_password_cb *cb, void *u); EVP_PKEY *PEM_read_PUBKEY(FILE *fp, EVP_PKEY * *x, pem_password_cb *cb, void *u); int PEM_write_bio_PUBKEY(BIO *bp, EVP_PKEY *x); int PEM_write_PUBKEY(FILE *fp, EVP_PKEY *x); int PEM_write_bio_PKCS8PrivateKey_nid(BIO *bp, EVP_PKEY *x, int nid, char *kstr, int klen, pem_password_cb *cb, void *u); int PEM_write_bio_PKCS8PrivateKey(BIO *, EVP_PKEY *, const EVP_CIPHER *, char *, int, pem_password_cb *, void *); int i2d_PKCS8PrivateKey_bio(BIO *bp, EVP_PKEY *x, const EVP_CIPHER *enc, char *kstr, int klen, pem_password_cb *cb, void *u); int i2d_PKCS8PrivateKey_nid_bio(BIO *bp, EVP_PKEY *x, int nid, char *kstr, int klen, pem_password_cb *cb, void *u); EVP_PKEY *d2i_PKCS8PrivateKey_bio(BIO *bp, EVP_PKEY **x, pem_password_cb *cb, void *u); int i2d_PKCS8PrivateKey_fp(FILE *fp, EVP_PKEY *x, const EVP_CIPHER *enc, char *kstr, int klen, pem_password_cb *cb, void *u); int i2d_PKCS8PrivateKey_nid_fp(FILE *fp, EVP_PKEY *x, int nid, char *kstr, int klen, pem_password_cb *cb, void *u); int PEM_write_PKCS8PrivateKey_nid(FILE *fp, EVP_PKEY *x, int nid, char *kstr, int klen, pem_password_cb *cb, void *u); EVP_PKEY *d2i_PKCS8PrivateKey_fp(FILE *fp, EVP_PKEY **x, pem_password_cb *cb, void *u); int PEM_write_PKCS8PrivateKey(FILE *fp, EVP_PKEY *x, const EVP_CIPHER *enc, char *kstr, int klen, pem_password_cb *cd, void *u); void ERR_load_PEM_strings(void); #line 715 "/usr/include/openssl/pem.h" #line 733 "/usr/include/openssl/pem.h" #line 190 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/hmac.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 62 "/usr/include/openssl/hmac.h" typedef struct hmac_ctx_st { const EVP_MD *md; EVP_MD_CTX md_ctx; EVP_MD_CTX i_ctx; EVP_MD_CTX o_ctx; unsigned int key_length; unsigned char key[128]; } HMAC_CTX; void HMAC_CTX_init(HMAC_CTX *ctx); void HMAC_CTX_cleanup(HMAC_CTX *ctx); void HMAC_Init(HMAC_CTX *ctx, const void *key, int len, const EVP_MD *md); void HMAC_Init_ex(HMAC_CTX *ctx, const void *key, int len, const EVP_MD *md, ENGINE *impl); void HMAC_Update(HMAC_CTX *ctx, const unsigned char *data, size_t len); void HMAC_Final(HMAC_CTX *ctx, unsigned char *md, unsigned int *len); unsigned char *HMAC(const EVP_MD *evp_md, const void *key, int key_len, const unsigned char *d, size_t n, unsigned char *md, unsigned int *md_len); void HMAC_CTX_set_flags(HMAC_CTX *ctx, unsigned long flags); #line 191 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/kssl.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 68 "/usr/include/openssl/kssl.h" #line 193 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/symhacks.h" #line 436 "/usr/include/openssl/symhacks.h" #line 195 "/usr/include/openssl/ssl.h" #line 218 "/usr/include/openssl/ssl.h" #line 230 "/usr/include/openssl/ssl.h" #line 237 "/usr/include/openssl/ssl.h" #line 245 "/usr/include/openssl/ssl.h" #line 262 "/usr/include/openssl/ssl.h" #line 304 "/usr/include/openssl/ssl.h" typedef struct ssl_st *ssl_crock_st; typedef struct tls_session_ticket_ext_st TLS_SESSION_TICKET_EXT; typedef struct ssl_cipher_st { int valid; const char *name; unsigned long id; unsigned long algorithms; unsigned long algo_strength; unsigned long algorithm2; int strength_bits; int alg_bits; unsigned long mask; unsigned long mask_strength; } SSL_CIPHER; typedef int (*tls_session_ticket_ext_cb_fn)(SSL *s, const unsigned char *data, int len, void *arg); typedef int (*tls_session_secret_cb_fn)(SSL *s, void *secret, int *secret_len, STACK *peer_ciphers, SSL_CIPHER **cipher, void *arg); typedef struct ssl_method_st { int version; int (*ssl_new) (SSL *s); void (*ssl_clear) (SSL *s); void (*ssl_free) (SSL *s); int (*ssl_accept) (SSL *s); int (*ssl_connect) (SSL *s); int (*ssl_read) (SSL *s, void *buf, int len); int (*ssl_peek) (SSL *s, void *buf, int len); int (*ssl_write) (SSL *s, const void *buf, int len); int (*ssl_shutdown) (SSL *s); int (*ssl_renegotiate) (SSL *s); int (*ssl_renegotiate_check) (SSL *s); long (*ssl_get_message) (SSL *s, int st1, int stn, int mt, long max, int *ok); int (*ssl_read_bytes) (SSL *s, int type, unsigned char *buf, int len, int peek); int (*ssl_write_bytes) (SSL *s, int type, const void *buf_, int len); int (*ssl_dispatch_alert) (SSL *s); long (*ssl_ctrl) (SSL *s, int cmd, long larg, void *parg); long (*ssl_ctx_ctrl) (SSL_CTX *ctx, int cmd, long larg, void *parg); SSL_CIPHER *(*get_cipher_by_char) (const unsigned char *ptr); int (*put_cipher_by_char) (const SSL_CIPHER *cipher, unsigned char *ptr); int (*ssl_pending) (const SSL *s); int (*num_ciphers) (void); SSL_CIPHER *(*get_cipher) (unsigned ncipher); struct ssl_method_st *(*get_ssl_method) (int version); long (*get_timeout) (void); struct ssl3_enc_method *ssl3_enc; int (*ssl_version) (void); long (*ssl_callback_ctrl) (SSL *s, int cb_id, void (*fp) (void)); long (*ssl_ctx_callback_ctrl) (SSL_CTX *s, int cb_id, void (*fp) (void)); } SSL_METHOD; typedef struct ssl_session_st { int ssl_version; unsigned int key_arg_length; unsigned char key_arg[8]; int master_key_length; unsigned char master_key[48]; unsigned int session_id_length; unsigned char session_id[32]; unsigned int sid_ctx_length; unsigned char sid_ctx[32]; int not_resumable; struct sess_cert_st *sess_cert; X509 *peer; long verify_result; int references; long timeout; long time; int compress_meth; SSL_CIPHER *cipher; unsigned long cipher_id; STACK *ciphers; CRYPTO_EX_DATA ex_data; struct ssl_session_st *prev, *next; char *tlsext_hostname; unsigned char *tlsext_tick; size_t tlsext_ticklen; long tlsext_tick_lifetime_hint; } SSL_SESSION; #line 499 "/usr/include/openssl/ssl.h" #line 608 "/usr/include/openssl/ssl.h" #line 623 "/usr/include/openssl/ssl.h" void SSL_CTX_set_msg_callback(SSL_CTX *ctx, void (*cb) (int write_p, int version, int content_type, const void *buf, size_t len, SSL *ssl, void *arg)); void SSL_set_msg_callback(SSL *ssl, void (*cb) (int write_p, int version, int content_type, const void *buf, size_t len, SSL *ssl, void *arg)); typedef int (*GEN_SESSION_CB) (const SSL *ssl, unsigned char *id, unsigned int *id_len); typedef struct ssl_comp_st { int id; const char *name; COMP_METHOD *method; } SSL_COMP; struct ssl_ctx_st { SSL_METHOD *method; STACK *cipher_list; STACK *cipher_list_by_id; struct x509_store_st *cert_store; struct lhash_st *sessions; unsigned long session_cache_size; struct ssl_session_st *session_cache_head; struct ssl_session_st *session_cache_tail; int session_cache_mode; long session_timeout; int (*new_session_cb) (struct ssl_st *ssl, SSL_SESSION *sess); void (*remove_session_cb) (struct ssl_ctx_st *ctx, SSL_SESSION *sess); SSL_SESSION *(*get_session_cb) (struct ssl_st *ssl, unsigned char *data, int len, int *copy); struct { int sess_connect; int sess_connect_renegotiate; int sess_connect_good; int sess_accept; int sess_accept_renegotiate; int sess_accept_good; int sess_miss; int sess_timeout; int sess_cache_full; int sess_hit; int sess_cb_hit; } stats; int references; int (*app_verify_callback) (X509_STORE_CTX *, void *); void *app_verify_arg; pem_password_cb *default_passwd_callback; void *default_passwd_callback_userdata; int (*client_cert_cb) (SSL *ssl, X509 **x509, EVP_PKEY **pkey); int (*app_gen_cookie_cb) (SSL *ssl, unsigned char *cookie, unsigned int *cookie_len); int (*app_verify_cookie_cb) (SSL *ssl, unsigned char *cookie, unsigned int cookie_len); CRYPTO_EX_DATA ex_data; const EVP_MD *rsa_md5; const EVP_MD *md5; const EVP_MD *sha1; STACK *extra_certs; STACK *comp_methods; void (*info_callback) (const SSL *ssl, int type, int val); STACK *client_CA; unsigned long options; unsigned long mode; long max_cert_list; struct cert_st *cert; int read_ahead; void (*msg_callback) (int write_p, int version, int content_type, const void *buf, size_t len, SSL *ssl, void *arg); void *msg_callback_arg; int verify_mode; unsigned int sid_ctx_length; unsigned char sid_ctx[32]; int (*default_verify_callback) (int ok, X509_STORE_CTX *ctx); GEN_SESSION_CB generate_session_id; X509_VERIFY_PARAM *param; int quiet_shutdown; ENGINE *client_cert_engine; int (*tlsext_servername_callback) (SSL *, int *, void *); void *tlsext_servername_arg; unsigned char tlsext_tick_key_name[16]; unsigned char tlsext_tick_hmac_key[16]; unsigned char tlsext_tick_aes_key[16]; int (*tlsext_ticket_key_cb) (SSL *ssl, unsigned char *name, unsigned char *iv, EVP_CIPHER_CTX *ectx, HMAC_CTX *hctx, int enc); int (*tlsext_status_cb) (SSL *ssl, void *arg); void *tlsext_status_arg; }; struct lhash_st *SSL_CTX_sessions(SSL_CTX *ctx); #line 879 "/usr/include/openssl/ssl.h" void SSL_CTX_sess_set_new_cb(SSL_CTX *ctx, int (*new_session_cb) (struct ssl_st *ssl, SSL_SESSION *sess)); int (*SSL_CTX_sess_get_new_cb(SSL_CTX *ctx)) (struct ssl_st *ssl, SSL_SESSION *sess); void SSL_CTX_sess_set_remove_cb(SSL_CTX *ctx, void (*remove_session_cb) (struct ssl_ctx_st *ctx, SSL_SESSION *sess)); void (*SSL_CTX_sess_get_remove_cb(SSL_CTX *ctx)) (struct ssl_ctx_st *ctx, SSL_SESSION *sess); void SSL_CTX_sess_set_get_cb(SSL_CTX *ctx, SSL_SESSION *(*get_session_cb) (struct ssl_st *ssl, unsigned char *data, int len, int *copy)); SSL_SESSION *(*SSL_CTX_sess_get_get_cb(SSL_CTX *ctx)) (struct ssl_st *ssl, unsigned char *Data, int len, int *copy); void SSL_CTX_set_info_callback(SSL_CTX *ctx, void (*cb) (const SSL *ssl, int type, int val)); void (*SSL_CTX_get_info_callback(SSL_CTX *ctx)) (const SSL *ssl, int type, int val); void SSL_CTX_set_client_cert_cb(SSL_CTX *ctx, int (*client_cert_cb) (SSL *ssl, X509 **x509, EVP_PKEY **pkey)); int (*SSL_CTX_get_client_cert_cb(SSL_CTX *ctx)) (SSL *ssl, X509 **x509, EVP_PKEY **pkey); int SSL_CTX_set_client_cert_engine(SSL_CTX *ctx, ENGINE *e); void SSL_CTX_set_cookie_generate_cb(SSL_CTX *ctx, int (*app_gen_cookie_cb) (SSL *ssl, unsigned char *cookie, unsigned int *cookie_len)); void SSL_CTX_set_cookie_verify_cb(SSL_CTX *ctx, int (*app_verify_cookie_cb) (SSL *ssl, unsigned char *cookie, unsigned int cookie_len)); struct ssl_st { int version; int type; SSL_METHOD *method; BIO *rbio; BIO *wbio; BIO *bbio; #line 966 "/usr/include/openssl/ssl.h" int rwstate; int in_handshake; int (*handshake_func) (SSL *); int server; int new_session; int quiet_shutdown; int shutdown; int state; int rstate; BUF_MEM *init_buf; void *init_msg; int init_num; int init_off; unsigned char *packet; unsigned int packet_length; struct ssl2_state_st *s2; struct ssl3_state_st *s3; struct dtls1_state_st *d1; int read_ahead; void (*msg_callback) (int write_p, int version, int content_type, const void *buf, size_t len, SSL *ssl, void *arg); void *msg_callback_arg; int hit; X509_VERIFY_PARAM *param; STACK *cipher_list; STACK *cipher_list_by_id; EVP_CIPHER_CTX *enc_read_ctx; const EVP_MD *read_hash; COMP_CTX *expand; EVP_CIPHER_CTX *enc_write_ctx; const EVP_MD *write_hash; COMP_CTX *compress; struct cert_st *cert; unsigned int sid_ctx_length; unsigned char sid_ctx[32]; SSL_SESSION *session; GEN_SESSION_CB generate_session_id; int verify_mode; int (*verify_callback) (int ok, X509_STORE_CTX *ctx); void (*info_callback) (const SSL *ssl, int type, int val); int error; int error_code; SSL_CTX *ctx; int debug; long verify_result; CRYPTO_EX_DATA ex_data; STACK *client_CA; int references; unsigned long options; unsigned long mode; long max_cert_list; int first_packet; int client_version; void (*tlsext_debug_cb) (SSL *s, int client_server, int type, unsigned char *data, int len, void *arg); void *tlsext_debug_arg; char *tlsext_hostname; int servername_done; int tlsext_status_type; int tlsext_status_expected; STACK *tlsext_ocsp_ids; X509_EXTENSIONS *tlsext_ocsp_exts; unsigned char *tlsext_ocsp_resp; int tlsext_ocsp_resplen; int tlsext_ticket_expected; TLS_SESSION_TICKET_EXT *tlsext_session_ticket; tls_session_ticket_ext_cb_fn tls_session_ticket_ext_cb; void *tls_session_ticket_ext_cb_arg; tls_session_secret_cb_fn tls_session_secret_cb; void *tls_session_secret_cb_arg; SSL_CTX *initial_ctx; }; #line 1 "/usr/include/openssl/ssl2.h" #line 83 "/usr/include/openssl/ssl2.h" #line 103 "/usr/include/openssl/ssl2.h" #line 119 "/usr/include/openssl/ssl2.h" #line 156 "/usr/include/openssl/ssl2.h" typedef struct ssl2_state_st { int three_byte_header; int clear_text; int escape; int ssl2_rollback; unsigned int wnum; int wpend_tot; const unsigned char *wpend_buf; int wpend_off; int wpend_len; int wpend_ret; int rbuf_left; int rbuf_offs; unsigned char *rbuf; unsigned char *wbuf; unsigned char *write_ptr; unsigned int padding; unsigned int rlength; int ract_data_length; unsigned int wlength; int wact_data_length; unsigned char *ract_data; unsigned char *wact_data; unsigned char *mac_data; unsigned char *read_key; unsigned char *write_key; unsigned int challenge_length; unsigned char challenge[32]; unsigned int conn_id_length; unsigned char conn_id[16]; unsigned int key_material_length; unsigned char key_material[24 * 2]; unsigned long read_sequence; unsigned long write_sequence; struct { unsigned int conn_id_length; unsigned int cert_type; unsigned int cert_length; unsigned int csl; unsigned int clear; unsigned int enc; unsigned char ccl[32]; unsigned int cipher_spec_length; unsigned int session_id_length; unsigned int clen; unsigned int rlen; } tmp; } SSL2_STATE; #line 236 "/usr/include/openssl/ssl2.h" #line 257 "/usr/include/openssl/ssl2.h" #line 1147 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/ssl3.h" #line 1 "/usr/include/openssl/ssl.h" #line 126 "/usr/include/openssl/ssl3.h" #line 1 "/usr/include/openssl/pq_compat.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 64 "/usr/include/openssl/pq_compat.h" #line 110 "/usr/include/openssl/pq_compat.h" #line 124 "/usr/include/openssl/pq_compat.h" #line 140 "/usr/include/openssl/pq_compat.h" #line 151 "/usr/include/openssl/pq_compat.h" #line 127 "/usr/include/openssl/ssl3.h" #line 154 "/usr/include/openssl/ssl3.h" #line 161 "/usr/include/openssl/ssl3.h" #line 168 "/usr/include/openssl/ssl3.h" #line 184 "/usr/include/openssl/ssl3.h" #line 196 "/usr/include/openssl/ssl3.h" #line 203 "/usr/include/openssl/ssl3.h" #line 214 "/usr/include/openssl/ssl3.h" #line 221 "/usr/include/openssl/ssl3.h" #line 228 "/usr/include/openssl/ssl3.h" #line 247 "/usr/include/openssl/ssl3.h" #line 254 "/usr/include/openssl/ssl3.h" #line 270 "/usr/include/openssl/ssl3.h" #line 280 "/usr/include/openssl/ssl3.h" #line 308 "/usr/include/openssl/ssl3.h" typedef struct ssl3_record_st { int type; unsigned int length; unsigned int off; unsigned char *data; unsigned char *input; unsigned char *comp; unsigned long epoch; unsigned long seq_num; } SSL3_RECORD; typedef struct ssl3_buffer_st { unsigned char *buf; size_t len; int offset; int left; } SSL3_BUFFER; #line 362 "/usr/include/openssl/ssl3.h" typedef struct ssl3_state_st { long flags; int delay_buf_pop_ret; unsigned char read_sequence[8]; unsigned char read_mac_secret[64]; unsigned char write_sequence[8]; unsigned char write_mac_secret[64]; unsigned char server_random[32]; unsigned char client_random[32]; int need_empty_fragments; int empty_fragment_done; SSL3_BUFFER rbuf; SSL3_BUFFER wbuf; SSL3_RECORD rrec; SSL3_RECORD wrec; unsigned char alert_fragment[2]; unsigned int alert_fragment_len; unsigned char handshake_fragment[4]; unsigned int handshake_fragment_len; unsigned int wnum; int wpend_tot; int wpend_type; int wpend_ret; const unsigned char *wpend_buf; EVP_MD_CTX finish_dgst1; EVP_MD_CTX finish_dgst2; int change_cipher_spec; int warn_alert; int fatal_alert; int alert_dispatch; unsigned char send_alert[2]; int renegotiate; int total_renegotiations; int num_renegotiations; int in_read_app_data; struct { unsigned char cert_verify_md[64 * 2]; unsigned char finish_md[64 * 2]; int finish_md_len; unsigned char peer_finish_md[64 * 2]; int peer_finish_md_len; unsigned long message_size; int message_type; SSL_CIPHER *new_cipher; DH *dh; int next_state; int reuse_message; int cert_req; int ctype_num; char ctype[7]; STACK *ca_names; int use_rsa_tmp; int key_block_length; unsigned char *key_block; const EVP_CIPHER *new_sym_enc; const EVP_MD *new_hash; const SSL_COMP *new_compression; int cert_request; } tmp; unsigned char previous_client_finished[64]; unsigned char previous_client_finished_len; unsigned char previous_server_finished[64]; unsigned char previous_server_finished_len; int send_connection_binding; } SSL3_STATE; #line 507 "/usr/include/openssl/ssl3.h" #line 520 "/usr/include/openssl/ssl3.h" #line 529 "/usr/include/openssl/ssl3.h" #line 554 "/usr/include/openssl/ssl3.h" #line 565 "/usr/include/openssl/ssl3.h" #line 574 "/usr/include/openssl/ssl3.h" #line 588 "/usr/include/openssl/ssl3.h" #line 600 "/usr/include/openssl/ssl3.h" #line 1148 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/tls1.h" #line 122 "/usr/include/openssl/tls1.h" #line 129 "/usr/include/openssl/tls1.h" #line 140 "/usr/include/openssl/tls1.h" const char *SSL_get_servername(const SSL *s, const int type); int SSL_get_servername_type(const SSL *s); #line 226 "/usr/include/openssl/tls1.h" #line 235 "/usr/include/openssl/tls1.h" #line 242 "/usr/include/openssl/tls1.h" #line 250 "/usr/include/openssl/tls1.h" #line 257 "/usr/include/openssl/tls1.h" #line 265 "/usr/include/openssl/tls1.h" #line 314 "/usr/include/openssl/tls1.h" #line 322 "/usr/include/openssl/tls1.h" #line 329 "/usr/include/openssl/tls1.h" #line 368 "/usr/include/openssl/tls1.h" #line 375 "/usr/include/openssl/tls1.h" #line 383 "/usr/include/openssl/tls1.h" #line 392 "/usr/include/openssl/tls1.h" #line 412 "/usr/include/openssl/tls1.h" #line 462 "/usr/include/openssl/tls1.h" struct tls_session_ticket_ext_st { unsigned short length; void *data; }; #line 1149 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/dtls1.h" #line 1 "/usr/include/openssl/pqueue.h" #line 1 "/usr/include/string.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/string.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 34 "/usr/include/string.h" extern void *memcpy (void * __dest, const void * __src, size_t __n) ; extern void *memmove (void *__dest, const void *__src, size_t __n) ; extern void *memccpy (void * __dest, const void * __src, int __c, size_t __n) ; extern void *memset (void *__s, int __c, size_t __n) ; extern int memcmp (const void *__s1, const void *__s2, size_t __n) ; extern void *memchr (const void *__s, int __c, size_t __n) ; #line 80 "/usr/include/string.h" extern char *strcpy (char * __dest, const char * __src) ; extern char *strncpy (char * __dest, const char * __src, size_t __n) ; extern char *strcat (char * __dest, const char * __src) ; extern char *strncat (char * __dest, const char * __src, size_t __n) ; extern int strcmp (const char *__s1, const char *__s2) ; extern int strncmp (const char *__s1, const char *__s2, size_t __n) ; extern int strcoll (const char *__s1, const char *__s2) ; extern size_t strxfrm (char * __dest, const char * __src, size_t __n) ; #line 127 "/usr/include/string.h" extern char *strdup (const char *__s) ; #line 164 "/usr/include/string.h" extern char *strchr (const char *__s, int __c) ; extern char *strrchr (const char *__s, int __c) ; #line 180 "/usr/include/string.h" extern size_t strcspn (const char *__s, const char *__reject) ; extern size_t strspn (const char *__s, const char *__accept) ; extern char *strpbrk (const char *__s, const char *__accept) ; extern char *strstr (const char *__haystack, const char *__needle) ; extern char *strtok (char * __s, const char * __delim) ; extern char *__strtok_r (char * __s, const char * __delim, char ** __save_ptr) ; extern char *strtok_r (char * __s, const char * __delim, char ** __save_ptr) ; #line 238 "/usr/include/string.h" extern size_t strlen (const char *__s) ; #line 252 "/usr/include/string.h" extern char *strerror (int __errnum) ; extern int __xpg_strerror_r (int __errnum, char *__buf, size_t __buflen) ; #line 285 "/usr/include/string.h" extern void __bzero (void *__s, size_t __n) ; extern void bcopy (const void *__src, void *__dest, size_t __n) ; extern void bzero (void *__s, size_t __n) ; extern int bcmp (const void *__s1, const void *__s2, size_t __n) ; extern char *index (const char *__s, int __c) ; extern char *rindex (const char *__s, int __c) ; extern int ffs (int __i) ; #line 329 "/usr/include/string.h" extern int strcasecmp (const char *__s1, const char *__s2) ; extern int strncasecmp (const char *__s1, const char *__s2, size_t __n) ; #line 350 "/usr/include/string.h" extern char *strsep (char ** __stringp, const char * __delim) ; #line 396 "/usr/include/string.h" #line 431 "/usr/include/string.h" #line 66 "/usr/include/openssl/pqueue.h" typedef struct _pqueue *pqueue; typedef struct _pitem { unsigned long priority; void *data; struct _pitem *next; } pitem; typedef struct _pitem *piterator; pitem *pitem_new(unsigned long priority, void *data); void pitem_free(pitem *item); pqueue pqueue_new(void); void pqueue_free(pqueue pq); pitem *pqueue_insert(pqueue pq, pitem *item); pitem *pqueue_peek(pqueue pq); pitem *pqueue_pop(pqueue pq); pitem *pqueue_find(pqueue pq, unsigned long priority); pitem *pqueue_iterator(pqueue pq); pitem *pqueue_next(piterator *iter); void pqueue_print(pqueue pq); int pqueue_size(pqueue pq); #line 65 "/usr/include/openssl/dtls1.h" #line 1 "/usr/include/sys/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 24 "/usr/include/sys/time.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" #line 30 "/usr/include/sys/time.h" #line 52 "/usr/include/sys/time.h" struct timezone { int tz_minuteswest; int tz_dsttime; }; typedef struct timezone * __timezone_ptr_t; extern int gettimeofday (struct timeval * __tv, __timezone_ptr_t __tz) ; extern int settimeofday (const struct timeval *__tv, const struct timezone *__tz) ; extern int adjtime (const struct timeval *__delta, struct timeval *__olddelta) ; enum __itimer_which { ITIMER_REAL = 0, ITIMER_VIRTUAL = 1, ITIMER_PROF = 2 }; struct itimerval { struct timeval it_interval; struct timeval it_value; }; typedef int __itimer_which_t; extern int getitimer (__itimer_which_t __which, struct itimerval *__value) ; extern int setitimer (__itimer_which_t __which, const struct itimerval * __new, struct itimerval * __old) ; extern int utimes (const char *__file, const struct timeval __tvp[2]) ; extern int lutimes (const char *__file, const struct timeval __tvp[2]) ; extern int futimes (int __fd, const struct timeval __tvp[2]) ; #line 159 "/usr/include/sys/time.h" #line 190 "/usr/include/sys/time.h" #line 76 "/usr/include/openssl/dtls1.h" typedef struct dtls1_bitmap_st { unsigned long map; unsigned long length; unsigned long max_seq_num; } DTLS1_BITMAP; struct dtls1_retransmit_state { EVP_CIPHER_CTX *enc_write_ctx; const EVP_MD *write_hash; COMP_CTX *compress; SSL_SESSION *session; unsigned short epoch; }; struct hm_header_st { unsigned char type; unsigned long msg_len; unsigned short seq; unsigned long frag_off; unsigned long frag_len; unsigned int is_ccs; struct dtls1_retransmit_state saved_retransmit_state; }; struct ccs_header_st { unsigned char type; unsigned short seq; }; struct dtls1_timeout_st { unsigned int read_timeouts; unsigned int write_timeouts; unsigned int num_alerts; }; typedef struct record_pqueue_st { unsigned short epoch; pqueue q; } record_pqueue; typedef struct hm_fragment_st { struct hm_header_st msg_header; unsigned char *fragment; unsigned char *reassembly; } hm_fragment; typedef struct dtls1_state_st { unsigned int send_cookie; unsigned char cookie[256]; unsigned char rcvd_cookie[256]; unsigned int cookie_len; unsigned short r_epoch; unsigned short w_epoch; DTLS1_BITMAP bitmap; DTLS1_BITMAP next_bitmap; unsigned short handshake_write_seq; unsigned short next_handshake_write_seq; unsigned short handshake_read_seq; unsigned char last_write_sequence[8]; record_pqueue unprocessed_rcds; record_pqueue processed_rcds; pqueue buffered_messages; pqueue sent_messages; record_pqueue buffered_app_data; unsigned int listen; unsigned int mtu; struct hm_header_st w_msg_hdr; struct hm_header_st r_msg_hdr; struct dtls1_timeout_st timeout; struct timeval next_timeout; unsigned short timeout_duration; unsigned char alert_fragment[2]; unsigned int alert_fragment_len; unsigned char handshake_fragment[12]; unsigned int handshake_fragment_len; unsigned int retransmitting; unsigned int change_cipher_spec_ok; } DTLS1_STATE; typedef struct dtls1_record_data_st { unsigned char *packet; unsigned int packet_length; SSL3_BUFFER rbuf; SSL3_RECORD rrec; } DTLS1_RECORD_DATA; #line 1150 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/ssl23.h" #line 1151 "/usr/include/openssl/ssl.h" #line 1163 "/usr/include/openssl/ssl.h" #line 1179 "/usr/include/openssl/ssl.h" #line 1193 "/usr/include/openssl/ssl.h" #line 1201 "/usr/include/openssl/ssl.h" size_t SSL_get_finished(const SSL *s, void *buf, size_t count); size_t SSL_get_peer_finished(const SSL *s, void *buf, size_t count); #line 1239 "/usr/include/openssl/ssl.h" #line 1252 "/usr/include/openssl/ssl.h" #line 1265 "/usr/include/openssl/ssl.h" #line 1286 "/usr/include/openssl/ssl.h" #line 1310 "/usr/include/openssl/ssl.h" #line 1325 "/usr/include/openssl/ssl.h" #line 1333 "/usr/include/openssl/ssl.h" #line 1341 "/usr/include/openssl/ssl.h" #line 1362 "/usr/include/openssl/ssl.h" #line 1369 "/usr/include/openssl/ssl.h" #line 1382 "/usr/include/openssl/ssl.h" #line 1392 "/usr/include/openssl/ssl.h" #line 1412 "/usr/include/openssl/ssl.h" #line 1421 "/usr/include/openssl/ssl.h" #line 1430 "/usr/include/openssl/ssl.h" #line 1439 "/usr/include/openssl/ssl.h" BIO_METHOD *BIO_f_ssl(void); BIO *BIO_new_ssl(SSL_CTX *ctx, int client); BIO *BIO_new_ssl_connect(SSL_CTX *ctx); BIO *BIO_new_buffer_ssl_connect(SSL_CTX *ctx); int BIO_ssl_copy_session_id(BIO *to, BIO *from); void BIO_ssl_shutdown(BIO *ssl_bio); int SSL_CTX_set_cipher_list(SSL_CTX *, const char *str); SSL_CTX *SSL_CTX_new(SSL_METHOD *meth); void SSL_CTX_free(SSL_CTX *); long SSL_CTX_set_timeout(SSL_CTX *ctx, long t); long SSL_CTX_get_timeout(const SSL_CTX *ctx); X509_STORE *SSL_CTX_get_cert_store(const SSL_CTX *); void SSL_CTX_set_cert_store(SSL_CTX *, X509_STORE *); int SSL_want(const SSL *s); int SSL_clear(SSL *s); void SSL_CTX_flush_sessions(SSL_CTX *ctx, long tm); SSL_CIPHER *SSL_get_current_cipher(const SSL *s); int SSL_CIPHER_get_bits(const SSL_CIPHER *c, int *alg_bits); char *SSL_CIPHER_get_version(const SSL_CIPHER *c); const char *SSL_CIPHER_get_name(const SSL_CIPHER *c); int SSL_get_fd(const SSL *s); int SSL_get_rfd(const SSL *s); int SSL_get_wfd(const SSL *s); const char *SSL_get_cipher_list(const SSL *s, int n); char *SSL_get_shared_ciphers(const SSL *s, char *buf, int len); int SSL_get_read_ahead(const SSL *s); int SSL_pending(const SSL *s); int SSL_set_fd(SSL *s, int fd); int SSL_set_rfd(SSL *s, int fd); int SSL_set_wfd(SSL *s, int fd); void SSL_set_bio(SSL *s, BIO *rbio, BIO *wbio); BIO *SSL_get_rbio(const SSL *s); BIO *SSL_get_wbio(const SSL *s); int SSL_set_cipher_list(SSL *s, const char *str); void SSL_set_read_ahead(SSL *s, int yes); int SSL_get_verify_mode(const SSL *s); int SSL_get_verify_depth(const SSL *s); int (*SSL_get_verify_callback(const SSL *s)) (int, X509_STORE_CTX *); void SSL_set_verify(SSL *s, int mode, int (*callback) (int ok, X509_STORE_CTX *ctx)); void SSL_set_verify_depth(SSL *s, int depth); int SSL_use_RSAPrivateKey(SSL *ssl, RSA *rsa); int SSL_use_RSAPrivateKey_ASN1(SSL *ssl, unsigned char *d, long len); int SSL_use_PrivateKey(SSL *ssl, EVP_PKEY *pkey); int SSL_use_PrivateKey_ASN1(int pk, SSL *ssl, const unsigned char *d, long len); int SSL_use_certificate(SSL *ssl, X509 *x); int SSL_use_certificate_ASN1(SSL *ssl, const unsigned char *d, int len); int SSL_use_RSAPrivateKey_file(SSL *ssl, const char *file, int type); int SSL_use_PrivateKey_file(SSL *ssl, const char *file, int type); int SSL_use_certificate_file(SSL *ssl, const char *file, int type); int SSL_CTX_use_RSAPrivateKey_file(SSL_CTX *ctx, const char *file, int type); int SSL_CTX_use_PrivateKey_file(SSL_CTX *ctx, const char *file, int type); int SSL_CTX_use_certificate_file(SSL_CTX *ctx, const char *file, int type); int SSL_CTX_use_certificate_chain_file(SSL_CTX *ctx, const char *file); STACK *SSL_load_client_CA_file(const char *file); int SSL_add_file_cert_subjects_to_stack(STACK *stackCAs, const char *file); int SSL_add_dir_cert_subjects_to_stack(STACK *stackCAs, const char *dir); void SSL_load_error_strings(void); const char *SSL_state_string(const SSL *s); const char *SSL_rstate_string(const SSL *s); const char *SSL_state_string_long(const SSL *s); const char *SSL_rstate_string_long(const SSL *s); long SSL_SESSION_get_time(const SSL_SESSION *s); long SSL_SESSION_set_time(SSL_SESSION *s, long t); long SSL_SESSION_get_timeout(const SSL_SESSION *s); long SSL_SESSION_set_timeout(SSL_SESSION *s, long t); void SSL_copy_session_id(SSL *to, const SSL *from); SSL_SESSION *SSL_SESSION_new(void); unsigned long SSL_SESSION_hash(const SSL_SESSION *a); int SSL_SESSION_cmp(const SSL_SESSION *a, const SSL_SESSION *b); const unsigned char *SSL_SESSION_get_id(const SSL_SESSION *s, unsigned int *len); int SSL_SESSION_print_fp(FILE *fp, const SSL_SESSION *ses); int SSL_SESSION_print(BIO *fp, const SSL_SESSION *ses); void SSL_SESSION_free(SSL_SESSION *ses); int i2d_SSL_SESSION(SSL_SESSION *in, unsigned char **pp); int SSL_set_session(SSL *to, SSL_SESSION *session); int SSL_CTX_add_session(SSL_CTX *s, SSL_SESSION *c); int SSL_CTX_remove_session(SSL_CTX *, SSL_SESSION *c); int SSL_CTX_set_generate_session_id(SSL_CTX *, GEN_SESSION_CB); int SSL_set_generate_session_id(SSL *, GEN_SESSION_CB); int SSL_has_matching_session_id(const SSL *ssl, const unsigned char *id, unsigned int id_len); SSL_SESSION *d2i_SSL_SESSION(SSL_SESSION **a, const unsigned char **pp, long length); X509 *SSL_get_peer_certificate(const SSL *s); STACK *SSL_get_peer_cert_chain(const SSL *s); int SSL_CTX_get_verify_mode(const SSL_CTX *ctx); int SSL_CTX_get_verify_depth(const SSL_CTX *ctx); int (*SSL_CTX_get_verify_callback(const SSL_CTX *ctx)) (int, X509_STORE_CTX *); void SSL_CTX_set_verify(SSL_CTX *ctx, int mode, int (*callback) (int, X509_STORE_CTX *)); void SSL_CTX_set_verify_depth(SSL_CTX *ctx, int depth); void SSL_CTX_set_cert_verify_callback(SSL_CTX *ctx, int (*cb) (X509_STORE_CTX *, void *), void *arg); int SSL_CTX_use_RSAPrivateKey(SSL_CTX *ctx, RSA *rsa); int SSL_CTX_use_RSAPrivateKey_ASN1(SSL_CTX *ctx, const unsigned char *d, long len); int SSL_CTX_use_PrivateKey(SSL_CTX *ctx, EVP_PKEY *pkey); int SSL_CTX_use_PrivateKey_ASN1(int pk, SSL_CTX *ctx, const unsigned char *d, long len); int SSL_CTX_use_certificate(SSL_CTX *ctx, X509 *x); int SSL_CTX_use_certificate_ASN1(SSL_CTX *ctx, int len, const unsigned char *d); void SSL_CTX_set_default_passwd_cb(SSL_CTX *ctx, pem_password_cb *cb); void SSL_CTX_set_default_passwd_cb_userdata(SSL_CTX *ctx, void *u); int SSL_CTX_check_private_key(const SSL_CTX *ctx); int SSL_check_private_key(const SSL *ctx); int SSL_CTX_set_session_id_context(SSL_CTX *ctx, const unsigned char *sid_ctx, unsigned int sid_ctx_len); SSL *SSL_new(SSL_CTX *ctx); int SSL_set_session_id_context(SSL *ssl, const unsigned char *sid_ctx, unsigned int sid_ctx_len); int SSL_CTX_set_purpose(SSL_CTX *s, int purpose); int SSL_set_purpose(SSL *s, int purpose); int SSL_CTX_set_trust(SSL_CTX *s, int trust); int SSL_set_trust(SSL *s, int trust); void SSL_free(SSL *ssl); int SSL_accept(SSL *ssl); int SSL_connect(SSL *ssl); int SSL_read(SSL *ssl, void *buf, int num); int SSL_peek(SSL *ssl, void *buf, int num); int SSL_write(SSL *ssl, const void *buf, int num); long SSL_ctrl(SSL *ssl, int cmd, long larg, void *parg); long SSL_callback_ctrl(SSL *, int, void (*)(void)); long SSL_CTX_ctrl(SSL_CTX *ctx, int cmd, long larg, void *parg); long SSL_CTX_callback_ctrl(SSL_CTX *, int, void (*)(void)); int SSL_get_error(const SSL *s, int ret_code); const char *SSL_get_version(const SSL *s); int SSL_CTX_set_ssl_version(SSL_CTX *ctx, SSL_METHOD *meth); SSL_METHOD *SSLv2_method(void); SSL_METHOD *SSLv2_server_method(void); SSL_METHOD *SSLv2_client_method(void); SSL_METHOD *SSLv3_method(void); SSL_METHOD *SSLv3_server_method(void); SSL_METHOD *SSLv3_client_method(void); SSL_METHOD *SSLv23_method(void); SSL_METHOD *SSLv23_server_method(void); SSL_METHOD *SSLv23_client_method(void); SSL_METHOD *TLSv1_method(void); SSL_METHOD *TLSv1_server_method(void); SSL_METHOD *TLSv1_client_method(void); SSL_METHOD *DTLSv1_method(void); SSL_METHOD *DTLSv1_server_method(void); SSL_METHOD *DTLSv1_client_method(void); STACK *SSL_get_ciphers(const SSL *s); int SSL_do_handshake(SSL *s); int SSL_renegotiate(SSL *s); int SSL_renegotiate_pending(SSL *s); int SSL_shutdown(SSL *s); SSL_METHOD *SSL_get_ssl_method(SSL *s); int SSL_set_ssl_method(SSL *s, SSL_METHOD *method); const char *SSL_alert_type_string_long(int value); const char *SSL_alert_type_string(int value); const char *SSL_alert_desc_string_long(int value); const char *SSL_alert_desc_string(int value); void SSL_set_client_CA_list(SSL *s, STACK *name_list); void SSL_CTX_set_client_CA_list(SSL_CTX *ctx, STACK *name_list); STACK *SSL_get_client_CA_list(const SSL *s); STACK *SSL_CTX_get_client_CA_list(const SSL_CTX *s); int SSL_add_client_CA(SSL *ssl, X509 *x); int SSL_CTX_add_client_CA(SSL_CTX *ctx, X509 *x); void SSL_set_connect_state(SSL *s); void SSL_set_accept_state(SSL *s); long SSL_get_default_timeout(const SSL *s); int SSL_library_init(void); char *SSL_CIPHER_description(const SSL_CIPHER *, char *buf, int size); STACK *SSL_dup_CA_list(STACK *sk); SSL *SSL_dup(SSL *ssl); X509 *SSL_get_certificate(const SSL *ssl); struct evp_pkey_st *SSL_get_privatekey(SSL *ssl); void SSL_CTX_set_quiet_shutdown(SSL_CTX *ctx, int mode); int SSL_CTX_get_quiet_shutdown(const SSL_CTX *ctx); void SSL_set_quiet_shutdown(SSL *ssl, int mode); int SSL_get_quiet_shutdown(const SSL *ssl); void SSL_set_shutdown(SSL *ssl, int mode); int SSL_get_shutdown(const SSL *ssl); int SSL_version(const SSL *ssl); int SSL_CTX_set_default_verify_paths(SSL_CTX *ctx); int SSL_CTX_load_verify_locations(SSL_CTX *ctx, const char *CAfile, const char *CApath); SSL_SESSION *SSL_get_session(const SSL *ssl); SSL_SESSION *SSL_get1_session(SSL *ssl); SSL_CTX *SSL_get_SSL_CTX(const SSL *ssl); SSL_CTX *SSL_set_SSL_CTX(SSL *ssl, SSL_CTX *ctx); void SSL_set_info_callback(SSL *ssl, void (*cb) (const SSL *ssl, int type, int val)); void (*SSL_get_info_callback(const SSL *ssl)) (const SSL *ssl, int type, int val); int SSL_state(const SSL *ssl); void SSL_set_verify_result(SSL *ssl, long v); long SSL_get_verify_result(const SSL *ssl); int SSL_set_ex_data(SSL *ssl, int idx, void *data); void *SSL_get_ex_data(const SSL *ssl, int idx); int SSL_get_ex_new_index(long argl, void *argp, CRYPTO_EX_new *new_func, CRYPTO_EX_dup *dup_func, CRYPTO_EX_free *free_func); int SSL_SESSION_set_ex_data(SSL_SESSION *ss, int idx, void *data); void *SSL_SESSION_get_ex_data(const SSL_SESSION *ss, int idx); int SSL_SESSION_get_ex_new_index(long argl, void *argp, CRYPTO_EX_new *new_func, CRYPTO_EX_dup *dup_func, CRYPTO_EX_free *free_func); int SSL_CTX_set_ex_data(SSL_CTX *ssl, int idx, void *data); void *SSL_CTX_get_ex_data(const SSL_CTX *ssl, int idx); int SSL_CTX_get_ex_new_index(long argl, void *argp, CRYPTO_EX_new *new_func, CRYPTO_EX_dup *dup_func, CRYPTO_EX_free *free_func); int SSL_get_ex_data_X509_STORE_CTX_idx(void); #line 1734 "/usr/include/openssl/ssl.h" #line 1749 "/usr/include/openssl/ssl.h" void SSL_CTX_set_tmp_rsa_callback(SSL_CTX *ctx, RSA *(*cb) (SSL *ssl, int is_export, int keylength)); void SSL_set_tmp_rsa_callback(SSL *ssl, RSA *(*cb) (SSL *ssl, int is_export, int keylength)); void SSL_CTX_set_tmp_dh_callback(SSL_CTX *ctx, DH *(*dh) (SSL *ssl, int is_export, int keylength)); void SSL_set_tmp_dh_callback(SSL *ssl, DH *(*dh) (SSL *ssl, int is_export, int keylength)); const COMP_METHOD *SSL_get_current_compression(SSL *s); const COMP_METHOD *SSL_get_current_expansion(SSL *s); const char *SSL_COMP_get_name(const COMP_METHOD *comp); STACK *SSL_COMP_get_compression_methods(void); int SSL_COMP_add_compression_method(int id, COMP_METHOD *cm); #line 1782 "/usr/include/openssl/ssl.h" int SSL_set_session_ticket_ext(SSL *s, void *ext_data, int ext_len); int SSL_set_session_ticket_ext_cb(SSL *s, tls_session_ticket_ext_cb_fn cb,void *arg); int SSL_set_session_secret_cb(SSL *s, tls_session_secret_cb_fn tls_session_secret_cb, void *arg); void ERR_load_SSL_strings(void); #line 1998 "/usr/include/openssl/ssl.h" #line 2257 "/usr/include/openssl/ssl.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Found header files ['openssl/ssl.h'] in [] Popping language C ================================================================================ TEST checkSharedLibrary from config.packages.ssl(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:626) TESTING: checkSharedLibrary from config.packages.ssl(config/BuildSystem/config/package.py:626) By default we don't care about checking if the library is shared Popping language C Not a clone of PETSc, don't need Lgrind Pushing language C ================================================================================ TEST configureLibrary from config.packages.valgrind(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:572) TESTING: configureLibrary from config.packages.valgrind(config/BuildSystem/config/package.py:572) Find an installation and check if it can work with PETSc ================================================================================== Checking for a functional valgrind Not checking for library in Compiler specific search VALGRIND: [] because no functions given to check for ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names No functions to check for in library [] [] Checking for headers Compiler specific search VALGRIND: [] Pushing language C ================================================================================ TEST checkInclude from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['valgrind/valgrind.h'] in [] Checking include with compiler flags var CPPFLAGS [] Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c".: Popping language C Not checking for library in Package specific search directory VALGRIND: [] because no functions given to check for ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names No functions to check for in library [] [] Checking for headers Package specific search directory VALGRIND: ['/usr/local/include'] Pushing language C ================================================================================ TEST checkInclude from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['valgrind/valgrind.h'] in ['/usr/local/include'] Checking include with compiler flags var CPPFLAGS ['/usr/local/include'] Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/usr/local/include /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c".: Popping language C Not checking for library in Package specific search directory VALGRIND: [] because no functions given to check for ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names No functions to check for in library [] [] Checking for headers Package specific search directory VALGRIND: ['/usr/local/include'] Pushing language C ================================================================================ TEST checkInclude from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['valgrind/valgrind.h'] in ['/usr/local/include'] Checking include with compiler flags var CPPFLAGS ['/usr/local/include'] Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/usr/local/include /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c".: Popping language C Not checking for library in Package specific search directory VALGRIND: [] because no functions given to check for ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names No functions to check for in library [] [] Checking for headers Package specific search directory VALGRIND: ['/opt/local/include'] Pushing language C ================================================================================ TEST checkInclude from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['valgrind/valgrind.h'] in ['/opt/local/include'] Checking include with compiler flags var CPPFLAGS ['/opt/local/include'] Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/opt/local/include /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c".: Popping language C VALGRIND: DirPath not found.. skipping: /opt/local/lib64 Executing: uname -s stdout: Linux =============================================================================== It appears you do not have valgrind installed on your system. We HIGHLY recommend you install it from www.valgrind.org Or install valgrind-devel or equivalent using your package manager. Then rerun ./configure =============================================================================== Popping language C ================================================================================ TEST alternateConfigureLibrary from config.packages.pami(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.pami(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.PARTY(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.PARTY(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default Not a clone of PETSc or no Fortran, don't need Sowing ================================================================================ TEST alternateConfigureLibrary from config.packages.p4est(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.p4est(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.tchem(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.tchem(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.cgns(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.cgns(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.fftw(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.fftw(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.Chaco(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.Chaco(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.Mathematica(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.Mathematica(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST locateC2html from config.packages.c2html(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/c2html.py:33) TESTING: locateC2html from config.packages.c2html(config/BuildSystem/config/packages/c2html.py:33) Looking for default C2html executable Checking for program /opt/FJSVtclang/check/c2html...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/c2html...not found Checking for program /opt/kusu/bin/c2html...not found Checking for program /opt/kusu/sbin/c2html...not found Checking for program /usr/pgsql-9.0/bin/c2html...not found Checking for program /usr/local/bin/c2html...not found Checking for program /bin/c2html...not found Checking for program /usr/bin/c2html...not found Checking for program /home/hp150306/t00196/bin/c2html...not found Checking for program /home/hp150306/t00196/shortcut/c2html...not found Checking for program /opt/FJSVxosmmm/sbin/c2html...not found Checking for program /home/hp150306/t00196/c2html...not found Checking for program /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/bin/win32fe/c2html...not found ================================================================================ TEST alternateConfigureLibrary from config.packages.Numpy(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.Numpy(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.mpi4py(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/mpi4py.py:70) TESTING: alternateConfigureLibrary from config.packages.mpi4py(config/BuildSystem/config/packages/mpi4py.py:70) Defined make rule "mpi4py-build" with dependencies "" and code [] Defined make rule "mpi4py-install" with dependencies "" and code [] ================================================================================ TEST alternateConfigureLibrary from config.packages.petsc4py(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/petsc4py.py:103) TESTING: alternateConfigureLibrary from config.packages.petsc4py(config/BuildSystem/config/packages/petsc4py.py:103) Defined make rule "petsc4py-build" with dependencies "" and code [] Defined make rule "petsc4py-install" with dependencies "" and code [] ================================================================================ TEST alternateConfigureLibrary from config.packages.Matlab(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/Matlab.py:35) TESTING: alternateConfigureLibrary from config.packages.Matlab(config/BuildSystem/config/packages/Matlab.py:35) ================================================================================ TEST alternateConfigureLibrary from config.packages.MatlabEngine(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.MatlabEngine(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.opengl(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.opengl(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.glut(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.glut(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.opengles(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.opengles(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.boost(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.boost(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.PTScotch(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.PTScotch(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default Pushing language C ================================================================================ TEST configureLibrary from config.packages.hwloc(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:572) TESTING: configureLibrary from config.packages.hwloc(config/BuildSystem/config/package.py:572) Find an installation and check if it can work with PETSc ================================================================================== Checking for a functional hwloc Checking for library in Compiler specific search HWLOC: [] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [hwloc_topology_init] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char hwloc_topology_init(); static void _check_hwloc_topology_init() { hwloc_topology_init(); } int main() { _check_hwloc_topology_init();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o: In function `_check_hwloc_topology_init': conftest.c:(.text+0x4): undefined reference to `hwloc_topology_init' Popping language C Checking for library in Compiler specific search HWLOC: ['libhwloc.a'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [hwloc_topology_init] in library ['libhwloc.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char hwloc_topology_init(); static void _check_hwloc_topology_init() { hwloc_topology_init(); } int main() { _check_hwloc_topology_init();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -lhwloc -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lhwloc Popping language C Checking for library in Compiler specific search HWLOC: ['libhwloc.a', 'libxml2.a'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [hwloc_topology_init] in library ['libhwloc.a', 'libxml2.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char hwloc_topology_init(); static void _check_hwloc_topology_init() { hwloc_topology_init(); } int main() { _check_hwloc_topology_init();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -lhwloc -lxml2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lhwloc Popping language C Checking for library in Package specific search directory HWLOC: ['/usr/local/lib/libhwloc.a'] Contents: ['bin', 'etc', 'games', 'include', 'lib', 'lib64', 'libexec', 'sbin', 'share', 'src'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [hwloc_topology_init] in library ['/usr/local/lib/libhwloc.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char hwloc_topology_init(); static void _check_hwloc_topology_init() { hwloc_topology_init(); } int main() { _check_hwloc_topology_init();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib -L/usr/local/lib -lhwloc -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lhwloc Popping language C Checking for library in Package specific search directory HWLOC: ['/usr/local/lib/libhwloc.a', 'libxml2.a'] Contents: ['bin', 'etc', 'games', 'include', 'lib', 'lib64', 'libexec', 'sbin', 'share', 'src'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [hwloc_topology_init] in library ['/usr/local/lib/libhwloc.a', 'libxml2.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char hwloc_topology_init(); static void _check_hwloc_topology_init() { hwloc_topology_init(); } int main() { _check_hwloc_topology_init();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib -L/usr/local/lib -lhwloc -lxml2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lhwloc Popping language C Checking for library in Package specific search directory HWLOC: ['/usr/local/lib64/libhwloc.a'] Contents: ['bin', 'etc', 'games', 'include', 'lib', 'lib64', 'libexec', 'sbin', 'share', 'src'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [hwloc_topology_init] in library ['/usr/local/lib64/libhwloc.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char hwloc_topology_init(); static void _check_hwloc_topology_init() { hwloc_topology_init(); } int main() { _check_hwloc_topology_init();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib64 -L/usr/local/lib64 -lhwloc -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lhwloc Popping language C Checking for library in Package specific search directory HWLOC: ['/usr/local/lib64/libhwloc.a', 'libxml2.a'] Contents: ['bin', 'etc', 'games', 'include', 'lib', 'lib64', 'libexec', 'sbin', 'share', 'src'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [hwloc_topology_init] in library ['/usr/local/lib64/libhwloc.a', 'libxml2.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char hwloc_topology_init(); static void _check_hwloc_topology_init() { hwloc_topology_init(); } int main() { _check_hwloc_topology_init();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib64 -L/usr/local/lib64 -lhwloc -lxml2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lhwloc Popping language C Checking for library in Package specific search directory HWLOC: ['/opt/local/lib/libhwloc.a'] Contents: ['bin', 'conf', 'gcc', 'gcc-4.8.1', 'include', 'lib', 'Python-2.7.3', 'Python-2.7.3.omp', 'share', 'sparc64-unknown-linux-gnu', 'openjdk7u45', 'mpiJava', 'mpigcc', 'GCC_4.6.3'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [hwloc_topology_init] in library ['/opt/local/lib/libhwloc.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char hwloc_topology_init(); static void _check_hwloc_topology_init() { hwloc_topology_init(); } int main() { _check_hwloc_topology_init();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -Wl,-rpath,/opt/local/lib -L/opt/local/lib -lhwloc -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lhwloc Popping language C Checking for library in Package specific search directory HWLOC: ['/opt/local/lib/libhwloc.a', 'libxml2.a'] Contents: ['bin', 'conf', 'gcc', 'gcc-4.8.1', 'include', 'lib', 'Python-2.7.3', 'Python-2.7.3.omp', 'share', 'sparc64-unknown-linux-gnu', 'openjdk7u45', 'mpiJava', 'mpigcc', 'GCC_4.6.3'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [hwloc_topology_init] in library ['/opt/local/lib/libhwloc.a', 'libxml2.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char hwloc_topology_init(); static void _check_hwloc_topology_init() { hwloc_topology_init(); } int main() { _check_hwloc_topology_init();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -Wl,-rpath,/opt/local/lib -L/opt/local/lib -lhwloc -lxml2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lhwloc Popping language C HWLOC: DirPath not found.. skipping: /opt/local/lib64 ================================================================================ TEST checkSharedLibrary from config.packages.hwloc(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:626) TESTING: checkSharedLibrary from config.packages.hwloc(config/BuildSystem/config/package.py:626) By default we don't care about checking if the library is shared Popping language C ================================================================================ TEST alternateConfigureLibrary from config.packages.hdf5(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.hdf5(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.netcdf(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.netcdf(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.MOAB(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.MOAB(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.netcdf-cxx(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.netcdf-cxx(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.exodusii(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.exodusii(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default Pushing language C ================================================================================ TEST configureLibrary from config.packages.X(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:572) TESTING: configureLibrary from config.packages.X(config/BuildSystem/config/package.py:572) Find an installation and check if it can work with PETSc ================================================================================== Checking for a functional X Checking for library in Compiler specific search X: [] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [XSetWMName] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char XSetWMName(); static void _check_XSetWMName() { XSetWMName(); } int main() { _check_XSetWMName();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o: In function `_check_XSetWMName': conftest.c:(.text+0x4): undefined reference to `XSetWMName' Popping language C Checking for library in Compiler specific search X: ['libX11.a'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [XSetWMName] in library ['libX11.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char XSetWMName(); static void _check_XSetWMName() { XSetWMName(); } int main() { _check_XSetWMName();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -lX11 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lX11 Popping language C X: SearchDir DirPath not found.. skipping: /opt/X11 X: SearchDir DirPath not found.. skipping: /Developer/SDKs/MacOSX10.5.sdk/usr/X11 X: SearchDir DirPath not found.. skipping: /Developer/SDKs/MacOSX10.4u.sdk/usr/X11R6 X: SearchDir DirPath not found.. skipping: /usr/X11 X: SearchDir DirPath not found.. skipping: /usr/X11R6 X: SearchDir DirPath not found.. skipping: /usr/X11R5 X: SearchDir DirPath not found.. skipping: /usr/X11R4 X: SearchDir DirPath not found.. skipping: /usr/local/X11 X: SearchDir DirPath not found.. skipping: /usr/local/X11R6 X: SearchDir DirPath not found.. skipping: /usr/local/X11R5 X: SearchDir DirPath not found.. skipping: /usr/local/X11R4 X: SearchDir DirPath not found.. skipping: /usr/X386 X: SearchDir DirPath not found.. skipping: /usr/x386 X: SearchDir DirPath not found.. skipping: /usr/XFree86/X11 Checking for library in Package specific search directory X: ['/usr/local/lib/libX11.a'] Contents: ['bin', 'etc', 'games', 'include', 'lib', 'lib64', 'libexec', 'sbin', 'share', 'src'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [XSetWMName] in library ['/usr/local/lib/libX11.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char XSetWMName(); static void _check_XSetWMName() { XSetWMName(); } int main() { _check_XSetWMName();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib -L/usr/local/lib -lX11 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lX11 Popping language C Checking for library in Package specific search directory X: ['/usr/local/lib64/libX11.a'] Contents: ['bin', 'etc', 'games', 'include', 'lib', 'lib64', 'libexec', 'sbin', 'share', 'src'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [XSetWMName] in library ['/usr/local/lib64/libX11.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char XSetWMName(); static void _check_XSetWMName() { XSetWMName(); } int main() { _check_XSetWMName();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib64 -L/usr/local/lib64 -lX11 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lX11 Popping language C X: SearchDir DirPath not found.. skipping: /usr/local/x11r5 X: SearchDir DirPath not found.. skipping: /usr/lpp/Xamples X: SearchDir DirPath not found.. skipping: /usr/openwin X: SearchDir DirPath not found.. skipping: /usr/openwin/share ================================================================================ TEST checkSharedLibrary from config.packages.X(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:626) TESTING: checkSharedLibrary from config.packages.X(config/BuildSystem/config/package.py:626) By default we don't care about checking if the library is shared Popping language C ================================================================================ TEST alternateConfigureLibrary from config.packages.Triangle(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.Triangle(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.afterimage(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.afterimage(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default Pushing language C ================================================================================ TEST configureLibrary from config.packages.openmp(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/openmp.py:15) TESTING: configureLibrary from config.packages.openmp(config/BuildSystem/config/packages/openmp.py:15) Checks for -fopenmp compiler flag Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added C compiler flag -Kopenmp Popping language C Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -X9 -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.F Successful compile: Source: program main end Added FC compiler flag -Kopenmp Popping language FC Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added Cxx compiler flag -Kopenmp Popping language Cxx ================================================================================ TEST checkSharedLibrary from config.packages.openmp(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:626) TESTING: checkSharedLibrary from config.packages.openmp(config/BuildSystem/config/package.py:626) By default we don't care about checking if the library is shared Popping language C ================================================================================ TEST alternateConfigureLibrary from config.packages.saws(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.saws(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default Pushing language C ================================================================================ TEST configureLibrary from config.packages.pthread(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/pthread.py:19) TESTING: configureLibrary from config.packages.pthread(config/BuildSystem/config/packages/pthread.py:19) Checks for pthread_barrier_t, cpu_set_t, and sys/sysctl.h ================================================================================== Checking for a functional pthread Checking for library in Compiler specific search PTHREAD: [] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [pthread_create] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char pthread_create(); static void _check_pthread_create() { pthread_create(); } int main() { _check_pthread_create();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Checking for headers Compiler specific search PTHREAD: [] Pushing language C ================================================================================ TEST checkInclude from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['pthread.h'] in [] Checking include with compiler flags var CPPFLAGS [] Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/pthread.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 24 "/usr/include/pthread.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 25 "/usr/include/pthread.h" #line 1 "/usr/include/sched.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 24 "/usr/include/sched.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 27 "/usr/include/sched.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 30 "/usr/include/sched.h" #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 33 "/usr/include/sched.h" #line 1 "/usr/include/bits/sched.h" #line 36 "/usr/include/bits/sched.h" #line 64 "/usr/include/bits/sched.h" struct sched_param { int __sched_priority; }; extern int clone (int (*__fn) (void *__arg), void *__child_stack, int __flags, void *__arg, ...) ; extern int unshare (int __flags) ; extern int sched_getcpu (void) ; struct __sched_param { int __sched_priority; }; typedef unsigned long int __cpu_mask; typedef struct { __cpu_mask __bits[1024 / (8 * sizeof (__cpu_mask))]; } cpu_set_t; #line 146 "/usr/include/bits/sched.h" #line 164 "/usr/include/bits/sched.h" #line 174 "/usr/include/bits/sched.h" extern int __sched_cpucount (size_t __setsize, const cpu_set_t *__setp) ; extern cpu_set_t *__sched_cpualloc (size_t __count) ; extern void __sched_cpufree (cpu_set_t *__set) ; #line 36 "/usr/include/sched.h" extern int sched_setparam (__pid_t __pid, const struct sched_param *__param) ; extern int sched_getparam (__pid_t __pid, struct sched_param *__param) ; extern int sched_setscheduler (__pid_t __pid, int __policy, const struct sched_param *__param) ; extern int sched_getscheduler (__pid_t __pid) ; extern int sched_yield (void) ; extern int sched_get_priority_max (int __algorithm) ; extern int sched_get_priority_min (int __algorithm) ; extern int sched_rr_get_interval (__pid_t __pid, struct timespec *__t) ; #line 117 "/usr/include/sched.h" #line 26 "/usr/include/pthread.h" #line 1 "/usr/include/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 30 "/usr/include/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 40 "/usr/include/time.h" #line 1 "/usr/include/bits/time.h" #line 43 "/usr/include/bits/time.h" #line 44 "/usr/include/time.h" typedef __clock_t clock_t; typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" struct tm { int tm_sec; int tm_min; int tm_hour; int tm_mday; int tm_mon; int tm_year; int tm_wday; int tm_yday; int tm_isdst; long int tm_gmtoff; const char *tm_zone; }; struct itimerspec { struct timespec it_interval; struct timespec it_value; }; struct sigevent; typedef __pid_t pid_t; extern clock_t clock (void) ; extern time_t time (time_t *__timer) ; extern double difftime (time_t __time1, time_t __time0) ; extern time_t mktime (struct tm *__tp) ; extern size_t strftime (char * __s, size_t __maxsize, const char * __format, const struct tm * __tp) ; #line 212 "/usr/include/time.h" #line 227 "/usr/include/time.h" extern struct tm *gmtime (const time_t *__timer) ; extern struct tm *localtime (const time_t *__timer) ; extern struct tm *gmtime_r (const time_t * __timer, struct tm * __tp) ; extern struct tm *localtime_r (const time_t * __timer, struct tm * __tp) ; extern char *asctime (const struct tm *__tp) ; extern char *ctime (const time_t *__timer) ; extern char *asctime_r (const struct tm * __tp, char * __buf) ; extern char *ctime_r (const time_t * __timer, char * __buf) ; extern char *__tzname[2]; extern int __daylight; extern long int __timezone; extern char *tzname[2]; extern void tzset (void) ; extern int daylight; extern long int timezone; extern int stime (const time_t *__when) ; extern time_t timegm (struct tm *__tp) ; extern time_t timelocal (struct tm *__tp) ; extern int dysize (int __year) ; extern int nanosleep (const struct timespec *__requested_time, struct timespec *__remaining); extern int clock_getres (clockid_t __clock_id, struct timespec *__res) ; extern int clock_gettime (clockid_t __clock_id, struct timespec *__tp) ; extern int clock_settime (clockid_t __clock_id, const struct timespec *__tp) ; extern int clock_nanosleep (clockid_t __clock_id, int __flags, const struct timespec *__req, struct timespec *__rem); extern int clock_getcpuclockid (pid_t __pid, clockid_t *__clock_id) ; extern int timer_create (clockid_t __clock_id, struct sigevent * __evp, timer_t * __timerid) ; extern int timer_delete (timer_t __timerid) ; extern int timer_settime (timer_t __timerid, int __flags, const struct itimerspec * __value, struct itimerspec * __ovalue) ; extern int timer_gettime (timer_t __timerid, struct itimerspec *__value) ; extern int timer_getoverrun (timer_t __timerid) ; #line 400 "/usr/include/time.h" #line 415 "/usr/include/time.h" #line 27 "/usr/include/pthread.h" #line 1 "/usr/include/signal.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 30 "/usr/include/signal.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 34 "/usr/include/signal.h" #line 46 "/usr/include/signal.h" typedef __sigset_t sigset_t; #line 401 "/usr/include/signal.h" #line 30 "/usr/include/pthread.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 31 "/usr/include/pthread.h" #line 1 "/usr/include/bits/setjmp.h" #line 1 "/usr/include/bits/wordsize.h" #line 28 "/usr/include/bits/setjmp.h" typedef struct __sparc64_jmp_buf { struct __sparc64_jmp_buf *uc_link; unsigned long uc_flags; unsigned long uc_sigmask; struct __sparc64_jmp_buf_mcontext { unsigned long mc_gregs[53]; unsigned long mc_fp; unsigned long mc_i7; struct __sparc64_jmp_buf_fpu { union { unsigned int sregs[512]; unsigned long dregs[256]; long double qregs[128]; } mcfpu_fpregs; unsigned long mcfpu_fsr; unsigned long mcfpu_fprs; unsigned long mcfpu_gsr; unsigned long mcfpu_xasr; void *mcfpu_fq; unsigned char mcfpu_qcnt; unsigned char mcfpu_qentsz; unsigned char mcfpu_enab; } mc_fpregs; } uc_mcontext; } __jmp_buf[1]; #line 70 "/usr/include/bits/setjmp.h" #line 32 "/usr/include/pthread.h" #line 1 "/usr/include/bits/wordsize.h" #line 33 "/usr/include/pthread.h" enum { PTHREAD_CREATE_JOINABLE, PTHREAD_CREATE_DETACHED }; enum { PTHREAD_MUTEX_TIMED_NP, PTHREAD_MUTEX_RECURSIVE_NP, PTHREAD_MUTEX_ERRORCHECK_NP, PTHREAD_MUTEX_ADAPTIVE_NP #line 63 "/usr/include/pthread.h" }; #line 74 "/usr/include/pthread.h" #line 85 "/usr/include/pthread.h" #line 111 "/usr/include/pthread.h" enum { PTHREAD_RWLOCK_PREFER_READER_NP, PTHREAD_RWLOCK_PREFER_WRITER_NP, PTHREAD_RWLOCK_PREFER_WRITER_NONRECURSIVE_NP, PTHREAD_RWLOCK_DEFAULT_NP = PTHREAD_RWLOCK_PREFER_READER_NP }; #line 144 "/usr/include/pthread.h" enum { PTHREAD_INHERIT_SCHED, PTHREAD_EXPLICIT_SCHED }; enum { PTHREAD_SCOPE_SYSTEM, PTHREAD_SCOPE_PROCESS }; enum { PTHREAD_PROCESS_PRIVATE, PTHREAD_PROCESS_SHARED }; struct _pthread_cleanup_buffer { void (*__routine) (void *); void *__arg; int __canceltype; struct _pthread_cleanup_buffer *__prev; }; enum { PTHREAD_CANCEL_ENABLE, PTHREAD_CANCEL_DISABLE }; enum { PTHREAD_CANCEL_DEFERRED, PTHREAD_CANCEL_ASYNCHRONOUS }; extern int pthread_create (pthread_t * __newthread, const pthread_attr_t * __attr, void *(*__start_routine) (void *), void * __arg) ; extern void pthread_exit (void *__retval) ; extern int pthread_join (pthread_t __th, void **__thread_return); #line 258 "/usr/include/pthread.h" extern int pthread_detach (pthread_t __th) ; extern pthread_t pthread_self (void) ; extern int pthread_equal (pthread_t __thread1, pthread_t __thread2) ; extern int pthread_attr_init (pthread_attr_t *__attr) ; extern int pthread_attr_destroy (pthread_attr_t *__attr) ; extern int pthread_attr_getdetachstate (const pthread_attr_t *__attr, int *__detachstate) ; extern int pthread_attr_setdetachstate (pthread_attr_t *__attr, int __detachstate) ; extern int pthread_attr_getguardsize (const pthread_attr_t *__attr, size_t *__guardsize) ; extern int pthread_attr_setguardsize (pthread_attr_t *__attr, size_t __guardsize) ; extern int pthread_attr_getschedparam (const pthread_attr_t * __attr, struct sched_param * __param) ; extern int pthread_attr_setschedparam (pthread_attr_t * __attr, const struct sched_param * __param) ; extern int pthread_attr_getschedpolicy (const pthread_attr_t * __attr, int * __policy) ; extern int pthread_attr_setschedpolicy (pthread_attr_t *__attr, int __policy) ; extern int pthread_attr_getinheritsched (const pthread_attr_t * __attr, int * __inherit) ; extern int pthread_attr_setinheritsched (pthread_attr_t *__attr, int __inherit) ; extern int pthread_attr_getscope (const pthread_attr_t * __attr, int * __scope) ; extern int pthread_attr_setscope (pthread_attr_t *__attr, int __scope) ; extern int pthread_attr_getstackaddr (const pthread_attr_t * __attr, void ** __stackaddr) ; extern int pthread_attr_setstackaddr (pthread_attr_t *__attr, void *__stackaddr) ; extern int pthread_attr_getstacksize (const pthread_attr_t * __attr, size_t * __stacksize) ; extern int pthread_attr_setstacksize (pthread_attr_t *__attr, size_t __stacksize) ; extern int pthread_attr_getstack (const pthread_attr_t * __attr, void ** __stackaddr, size_t * __stacksize) ; extern int pthread_attr_setstack (pthread_attr_t *__attr, void *__stackaddr, size_t __stacksize) ; #line 407 "/usr/include/pthread.h" extern int pthread_setschedparam (pthread_t __target_thread, int __policy, const struct sched_param *__param) ; extern int pthread_getschedparam (pthread_t __target_thread, int * __policy, struct sched_param * __param) ; extern int pthread_setschedprio (pthread_t __target_thread, int __prio) ; #line 435 "/usr/include/pthread.h" #line 455 "/usr/include/pthread.h" extern int pthread_once (pthread_once_t *__once_control, void (*__init_routine) (void)) ; extern int pthread_setcancelstate (int __state, int *__oldstate); extern int pthread_setcanceltype (int __type, int *__oldtype); extern int pthread_cancel (pthread_t __th); extern void pthread_testcancel (void); typedef struct { struct { __jmp_buf __cancel_jmp_buf; int __mask_was_saved; } __cancel_jmp_buf[1]; void *__pad[4]; } __pthread_unwind_buf_t ; struct __pthread_cleanup_frame { void (*__cancel_routine) (void *); void *__cancel_arg; int __do_it; int __cancel_type; }; #line 629 "/usr/include/pthread.h" #line 652 "/usr/include/pthread.h" extern void __pthread_register_cancel (__pthread_unwind_buf_t *__buf) ; #line 663 "/usr/include/pthread.h" extern void __pthread_unregister_cancel (__pthread_unwind_buf_t *__buf) ; #line 701 "/usr/include/pthread.h" extern void __pthread_unwind_next (__pthread_unwind_buf_t *__buf) ; struct __jmp_buf_tag; extern int __sigsetjmp (struct __jmp_buf_tag *__env, int __savemask) ; extern int pthread_mutex_init (pthread_mutex_t *__mutex, const pthread_mutexattr_t *__mutexattr) ; extern int pthread_mutex_destroy (pthread_mutex_t *__mutex) ; extern int pthread_mutex_trylock (pthread_mutex_t *__mutex) ; extern int pthread_mutex_lock (pthread_mutex_t *__mutex) ; extern int pthread_mutex_timedlock (pthread_mutex_t * __mutex, const struct timespec * __abstime) ; extern int pthread_mutex_unlock (pthread_mutex_t *__mutex) ; #line 761 "/usr/include/pthread.h" extern int pthread_mutexattr_init (pthread_mutexattr_t *__attr) ; extern int pthread_mutexattr_destroy (pthread_mutexattr_t *__attr) ; extern int pthread_mutexattr_getpshared (const pthread_mutexattr_t * __attr, int * __pshared) ; extern int pthread_mutexattr_setpshared (pthread_mutexattr_t *__attr, int __pshared) ; #line 827 "/usr/include/pthread.h" #line 839 "/usr/include/pthread.h" extern int pthread_rwlock_init (pthread_rwlock_t * __rwlock, const pthread_rwlockattr_t * __attr) ; extern int pthread_rwlock_destroy (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlock_rdlock (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlock_tryrdlock (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlock_timedrdlock (pthread_rwlock_t * __rwlock, const struct timespec * __abstime) ; extern int pthread_rwlock_wrlock (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlock_trywrlock (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlock_timedwrlock (pthread_rwlock_t * __rwlock, const struct timespec * __abstime) ; extern int pthread_rwlock_unlock (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlockattr_init (pthread_rwlockattr_t *__attr) ; extern int pthread_rwlockattr_destroy (pthread_rwlockattr_t *__attr) ; extern int pthread_rwlockattr_getpshared (const pthread_rwlockattr_t * __attr, int * __pshared) ; extern int pthread_rwlockattr_setpshared (pthread_rwlockattr_t *__attr, int __pshared) ; extern int pthread_rwlockattr_getkind_np (const pthread_rwlockattr_t * __attr, int * __pref) ; extern int pthread_rwlockattr_setkind_np (pthread_rwlockattr_t *__attr, int __pref) ; extern int pthread_cond_init (pthread_cond_t * __cond, const pthread_condattr_t * __cond_attr) ; extern int pthread_cond_destroy (pthread_cond_t *__cond) ; extern int pthread_cond_signal (pthread_cond_t *__cond) ; extern int pthread_cond_broadcast (pthread_cond_t *__cond) ; extern int pthread_cond_wait (pthread_cond_t * __cond, pthread_mutex_t * __mutex) ; extern int pthread_cond_timedwait (pthread_cond_t * __cond, pthread_mutex_t * __mutex, const struct timespec * __abstime) ; extern int pthread_condattr_init (pthread_condattr_t *__attr) ; extern int pthread_condattr_destroy (pthread_condattr_t *__attr) ; extern int pthread_condattr_getpshared (const pthread_condattr_t * __attr, int * __pshared) ; extern int pthread_condattr_setpshared (pthread_condattr_t *__attr, int __pshared) ; extern int pthread_condattr_getclock (const pthread_condattr_t * __attr, __clockid_t * __clock_id) ; extern int pthread_condattr_setclock (pthread_condattr_t *__attr, __clockid_t __clock_id) ; extern int pthread_spin_init (pthread_spinlock_t *__lock, int __pshared) ; extern int pthread_spin_destroy (pthread_spinlock_t *__lock) ; extern int pthread_spin_lock (pthread_spinlock_t *__lock) ; extern int pthread_spin_trylock (pthread_spinlock_t *__lock) ; extern int pthread_spin_unlock (pthread_spinlock_t *__lock) ; extern int pthread_barrier_init (pthread_barrier_t * __barrier, const pthread_barrierattr_t * __attr, unsigned int __count) ; extern int pthread_barrier_destroy (pthread_barrier_t *__barrier) ; extern int pthread_barrier_wait (pthread_barrier_t *__barrier) ; extern int pthread_barrierattr_init (pthread_barrierattr_t *__attr) ; extern int pthread_barrierattr_destroy (pthread_barrierattr_t *__attr) ; extern int pthread_barrierattr_getpshared (const pthread_barrierattr_t * __attr, int * __pshared) ; extern int pthread_barrierattr_setpshared (pthread_barrierattr_t *__attr, int __pshared) ; extern int pthread_key_create (pthread_key_t *__key, void (*__destr_function) (void *)) ; extern int pthread_key_delete (pthread_key_t __key) ; extern void *pthread_getspecific (pthread_key_t __key) ; extern int pthread_setspecific (pthread_key_t __key, const void *__pointer) ; extern int pthread_getcpuclockid (pthread_t __thread_id, __clockid_t *__clock_id) ; extern int pthread_atfork (void (*__prepare) (void), void (*__parent) (void), void (*__child) (void)) ; #line 1116 "/usr/include/pthread.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Found header files ['pthread.h'] in [] Popping language C All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread/conftest.c", line 6: warning: variable "a" was declared but never referenced pthread_barrier_t *a; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { pthread_barrier_t *a; ; return 0; } Defined "HAVE_PTHREAD_BARRIER_T" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread/conftest.c", line 6: warning: variable "a" was declared but never referenced cpu_set_t *a; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { cpu_set_t *a; ; return 0; } Defined "HAVE_SCHED_CPU_SET_T" to "1" Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread/conftest.c" #line 1 "/usr/include/sys/sysctl.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/sys/sysctl.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 25 "/usr/include/sys/sysctl.h" #line 43 "/usr/include/sys/sysctl.h" #line 1 "/usr/include/linux/sysctl.h" #line 1 "/usr/include/linux/kernel.h" #line 29 "/usr/include/linux/sysctl.h" #line 1 "/usr/include/linux/types.h" #line 30 "/usr/include/linux/sysctl.h" struct file; struct completion; struct __sysctl_args { int *name; int nlen; void *oldval; size_t *oldlenp; void *newval; size_t newlen; unsigned long __unused[4]; }; enum { CTL_KERN=1, CTL_VM=2, CTL_NET=3, CTL_PROC=4, CTL_FS=5, CTL_DEBUG=6, CTL_DEV=7, CTL_BUS=8, CTL_ABI=9, CTL_CPU=10, CTL_ARLAN=254, CTL_S390DBF=5677, CTL_SUNRPC=7249, CTL_PM=9899, CTL_FRV=9898, }; enum { CTL_BUS_ISA=1 }; enum { INOTIFY_MAX_USER_INSTANCES=1, INOTIFY_MAX_USER_WATCHES=2, INOTIFY_MAX_QUEUED_EVENTS=3 }; enum { KERN_OSTYPE=1, KERN_OSRELEASE=2, KERN_OSREV=3, KERN_VERSION=4, KERN_SECUREMASK=5, KERN_PROF=6, KERN_NODENAME=7, KERN_DOMAINNAME=8, KERN_PANIC=15, KERN_REALROOTDEV=16, KERN_SPARC_REBOOT=21, KERN_CTLALTDEL=22, KERN_PRINTK=23, KERN_NAMETRANS=24, KERN_PPC_HTABRECLAIM=25, KERN_PPC_ZEROPAGED=26, KERN_PPC_POWERSAVE_NAP=27, KERN_MODPROBE=28, KERN_SG_BIG_BUFF=29, KERN_ACCT=30, KERN_PPC_L2CR=31, KERN_RTSIGNR=32, KERN_RTSIGMAX=33, KERN_SHMMAX=34, KERN_MSGMAX=35, KERN_MSGMNB=36, KERN_MSGPOOL=37, KERN_SYSRQ=38, KERN_MAX_THREADS=39, KERN_RANDOM=40, KERN_SHMALL=41, KERN_MSGMNI=42, KERN_SEM=43, KERN_SPARC_STOP_A=44, KERN_SHMMNI=45, KERN_OVERFLOWUID=46, KERN_OVERFLOWGID=47, KERN_SHMPATH=48, KERN_HOTPLUG=49, KERN_IEEE_EMULATION_WARNINGS=50, KERN_S390_USER_DEBUG_LOGGING=51, KERN_CORE_USES_PID=52, KERN_TAINTED=53, KERN_CADPID=54, KERN_PIDMAX=55, KERN_CORE_PATTERN=56, KERN_PANIC_ON_OOPS=57, KERN_HPPA_PWRSW=58, KERN_HPPA_UNALIGNED=59, KERN_PRINTK_RATELIMIT=60, KERN_PRINTK_RATELIMIT_BURST=61, KERN_PTY=62, KERN_NGROUPS_MAX=63, KERN_SPARC_SCONS_PWROFF=64, KERN_HZ_TIMER=65, KERN_UNKNOWN_NMI_PANIC=66, KERN_BOOTLOADER_TYPE=67, KERN_RANDOMIZE=68, KERN_SETUID_DUMPABLE=69, KERN_SPIN_RETRY=70, KERN_ACPI_VIDEO_FLAGS=71, KERN_IA64_UNALIGNED=72, KERN_COMPAT_LOG=73, KERN_MAX_LOCK_DEPTH=74, KERN_NMI_WATCHDOG=75, KERN_PANIC_ON_NMI=76, }; enum { VM_UNUSED1=1, VM_UNUSED2=2, VM_UNUSED3=3, VM_UNUSED4=4, VM_OVERCOMMIT_MEMORY=5, VM_UNUSED5=6, VM_UNUSED7=7, VM_UNUSED8=8, VM_UNUSED9=9, VM_PAGE_CLUSTER=10, VM_DIRTY_BACKGROUND=11, VM_DIRTY_RATIO=12, VM_DIRTY_WB_CS=13, VM_DIRTY_EXPIRE_CS=14, VM_NR_PDFLUSH_THREADS=15, VM_OVERCOMMIT_RATIO=16, VM_PAGEBUF=17, VM_HUGETLB_PAGES=18, VM_SWAPPINESS=19, VM_LOWMEM_RESERVE_RATIO=20, VM_MIN_FREE_KBYTES=21, VM_MAX_MAP_COUNT=22, VM_LAPTOP_MODE=23, VM_BLOCK_DUMP=24, VM_HUGETLB_GROUP=25, VM_VFS_CACHE_PRESSURE=26, VM_LEGACY_VA_LAYOUT=27, VM_SWAP_TOKEN_TIMEOUT=28, VM_DROP_PAGECACHE=29, VM_PERCPU_PAGELIST_FRACTION=30, VM_ZONE_RECLAIM_MODE=31, VM_MIN_UNMAPPED=32, VM_PANIC_ON_OOM=33, VM_VDSO_ENABLED=34, VM_MIN_SLAB=35, VM_MPG_CTL=36, }; enum mpg_proc_type { MPG_CTL_TOTAL_BYTES = 1, }; enum { NET_CORE=1, NET_ETHER=2, NET_802=3, NET_UNIX=4, NET_IPV4=5, NET_IPX=6, NET_ATALK=7, NET_NETROM=8, NET_AX25=9, NET_BRIDGE=10, NET_ROSE=11, NET_IPV6=12, NET_X25=13, NET_TR=14, NET_DECNET=15, NET_ECONET=16, NET_SCTP=17, NET_LLC=18, NET_NETFILTER=19, NET_DCCP=20, NET_IRDA=412, }; enum { RANDOM_POOLSIZE=1, RANDOM_ENTROPY_COUNT=2, RANDOM_READ_THRESH=3, RANDOM_WRITE_THRESH=4, RANDOM_BOOT_ID=5, RANDOM_UUID=6 }; enum { PTY_MAX=1, PTY_NR=2 }; enum { BUS_ISA_MEM_BASE=1, BUS_ISA_PORT_BASE=2, BUS_ISA_PORT_SHIFT=3 }; enum { NET_CORE_WMEM_MAX=1, NET_CORE_RMEM_MAX=2, NET_CORE_WMEM_DEFAULT=3, NET_CORE_RMEM_DEFAULT=4, NET_CORE_MAX_BACKLOG=6, NET_CORE_FASTROUTE=7, NET_CORE_MSG_COST=8, NET_CORE_MSG_BURST=9, NET_CORE_OPTMEM_MAX=10, NET_CORE_HOT_LIST_LENGTH=11, NET_CORE_DIVERT_VERSION=12, NET_CORE_NO_CONG_THRESH=13, NET_CORE_NO_CONG=14, NET_CORE_LO_CONG=15, NET_CORE_MOD_CONG=16, NET_CORE_DEV_WEIGHT=17, NET_CORE_SOMAXCONN=18, NET_CORE_BUDGET=19, NET_CORE_AEVENT_ETIME=20, NET_CORE_AEVENT_RSEQTH=21, NET_CORE_WARNINGS=22, }; enum { NET_UNIX_DESTROY_DELAY=1, NET_UNIX_DELETE_DELAY=2, NET_UNIX_MAX_DGRAM_QLEN=3, }; enum { NET_NF_CONNTRACK_MAX=1, NET_NF_CONNTRACK_TCP_TIMEOUT_SYN_SENT=2, NET_NF_CONNTRACK_TCP_TIMEOUT_SYN_RECV=3, NET_NF_CONNTRACK_TCP_TIMEOUT_ESTABLISHED=4, NET_NF_CONNTRACK_TCP_TIMEOUT_FIN_WAIT=5, NET_NF_CONNTRACK_TCP_TIMEOUT_CLOSE_WAIT=6, NET_NF_CONNTRACK_TCP_TIMEOUT_LAST_ACK=7, NET_NF_CONNTRACK_TCP_TIMEOUT_TIME_WAIT=8, NET_NF_CONNTRACK_TCP_TIMEOUT_CLOSE=9, NET_NF_CONNTRACK_UDP_TIMEOUT=10, NET_NF_CONNTRACK_UDP_TIMEOUT_STREAM=11, NET_NF_CONNTRACK_ICMP_TIMEOUT=12, NET_NF_CONNTRACK_GENERIC_TIMEOUT=13, NET_NF_CONNTRACK_BUCKETS=14, NET_NF_CONNTRACK_LOG_INVALID=15, NET_NF_CONNTRACK_TCP_TIMEOUT_MAX_RETRANS=16, NET_NF_CONNTRACK_TCP_LOOSE=17, NET_NF_CONNTRACK_TCP_BE_LIBERAL=18, NET_NF_CONNTRACK_TCP_MAX_RETRANS=19, NET_NF_CONNTRACK_SCTP_TIMEOUT_CLOSED=20, NET_NF_CONNTRACK_SCTP_TIMEOUT_COOKIE_WAIT=21, NET_NF_CONNTRACK_SCTP_TIMEOUT_COOKIE_ECHOED=22, NET_NF_CONNTRACK_SCTP_TIMEOUT_ESTABLISHED=23, NET_NF_CONNTRACK_SCTP_TIMEOUT_SHUTDOWN_SENT=24, NET_NF_CONNTRACK_SCTP_TIMEOUT_SHUTDOWN_RECD=25, NET_NF_CONNTRACK_SCTP_TIMEOUT_SHUTDOWN_ACK_SENT=26, NET_NF_CONNTRACK_COUNT=27, NET_NF_CONNTRACK_ICMPV6_TIMEOUT=28, NET_NF_CONNTRACK_FRAG6_TIMEOUT=29, NET_NF_CONNTRACK_FRAG6_LOW_THRESH=30, NET_NF_CONNTRACK_FRAG6_HIGH_THRESH=31, NET_NF_CONNTRACK_CHECKSUM=32, }; enum { NET_IPV4_FORWARD=8, NET_IPV4_DYNADDR=9, NET_IPV4_CONF=16, NET_IPV4_NEIGH=17, NET_IPV4_ROUTE=18, NET_IPV4_FIB_HASH=19, NET_IPV4_NETFILTER=20, NET_IPV4_TCP_TIMESTAMPS=33, NET_IPV4_TCP_WINDOW_SCALING=34, NET_IPV4_TCP_SACK=35, NET_IPV4_TCP_RETRANS_COLLAPSE=36, NET_IPV4_DEFAULT_TTL=37, NET_IPV4_AUTOCONFIG=38, NET_IPV4_NO_PMTU_DISC=39, NET_IPV4_TCP_SYN_RETRIES=40, NET_IPV4_IPFRAG_HIGH_THRESH=41, NET_IPV4_IPFRAG_LOW_THRESH=42, NET_IPV4_IPFRAG_TIME=43, NET_IPV4_TCP_MAX_KA_PROBES=44, NET_IPV4_TCP_KEEPALIVE_TIME=45, NET_IPV4_TCP_KEEPALIVE_PROBES=46, NET_IPV4_TCP_RETRIES1=47, NET_IPV4_TCP_RETRIES2=48, NET_IPV4_TCP_FIN_TIMEOUT=49, NET_IPV4_IP_MASQ_DEBUG=50, NET_TCP_SYNCOOKIES=51, NET_TCP_STDURG=52, NET_TCP_RFC1337=53, NET_TCP_SYN_TAILDROP=54, NET_TCP_MAX_SYN_BACKLOG=55, NET_IPV4_LOCAL_PORT_RANGE=56, NET_IPV4_ICMP_ECHO_IGNORE_ALL=57, NET_IPV4_ICMP_ECHO_IGNORE_BROADCASTS=58, NET_IPV4_ICMP_SOURCEQUENCH_RATE=59, NET_IPV4_ICMP_DESTUNREACH_RATE=60, NET_IPV4_ICMP_TIMEEXCEED_RATE=61, NET_IPV4_ICMP_PARAMPROB_RATE=62, NET_IPV4_ICMP_ECHOREPLY_RATE=63, NET_IPV4_ICMP_IGNORE_BOGUS_ERROR_RESPONSES=64, NET_IPV4_IGMP_MAX_MEMBERSHIPS=65, NET_TCP_TW_RECYCLE=66, NET_IPV4_ALWAYS_DEFRAG=67, NET_IPV4_TCP_KEEPALIVE_INTVL=68, NET_IPV4_INET_PEER_THRESHOLD=69, NET_IPV4_INET_PEER_MINTTL=70, NET_IPV4_INET_PEER_MAXTTL=71, NET_IPV4_INET_PEER_GC_MINTIME=72, NET_IPV4_INET_PEER_GC_MAXTIME=73, NET_TCP_ORPHAN_RETRIES=74, NET_TCP_ABORT_ON_OVERFLOW=75, NET_TCP_SYNACK_RETRIES=76, NET_TCP_MAX_ORPHANS=77, NET_TCP_MAX_TW_BUCKETS=78, NET_TCP_FACK=79, NET_TCP_REORDERING=80, NET_TCP_ECN=81, NET_TCP_DSACK=82, NET_TCP_MEM=83, NET_TCP_WMEM=84, NET_TCP_RMEM=85, NET_TCP_APP_WIN=86, NET_TCP_ADV_WIN_SCALE=87, NET_IPV4_NONLOCAL_BIND=88, NET_IPV4_ICMP_RATELIMIT=89, NET_IPV4_ICMP_RATEMASK=90, NET_TCP_TW_REUSE=91, NET_TCP_FRTO=92, NET_TCP_LOW_LATENCY=93, NET_IPV4_IPFRAG_SECRET_INTERVAL=94, NET_IPV4_IGMP_MAX_MSF=96, NET_TCP_NO_METRICS_SAVE=97, NET_TCP_DEFAULT_WIN_SCALE=105, NET_TCP_MODERATE_RCVBUF=106, NET_TCP_TSO_WIN_DIVISOR=107, NET_TCP_BIC_BETA=108, NET_IPV4_ICMP_ERRORS_USE_INBOUND_IFADDR=109, NET_TCP_CONG_CONTROL=110, NET_TCP_ABC=111, NET_IPV4_IPFRAG_MAX_DIST=112, NET_TCP_MTU_PROBING=113, NET_TCP_BASE_MSS=114, NET_IPV4_TCP_WORKAROUND_SIGNED_WINDOWS=115, NET_TCP_DMA_COPYBREAK=116, NET_TCP_SLOW_START_AFTER_IDLE=117, NET_CIPSOV4_CACHE_ENABLE=118, NET_CIPSOV4_CACHE_BUCKET_SIZE=119, NET_CIPSOV4_RBM_OPTFMT=120, NET_CIPSOV4_RBM_STRICTVALID=121, NET_TCP_AVAIL_CONG_CONTROL=122, NET_TCP_ALLOWED_CONG_CONTROL=123, NET_TCP_MAX_SSTHRESH=124, NET_TCP_FRTO_RESPONSE=125, }; enum { NET_IPV4_ROUTE_FLUSH=1, NET_IPV4_ROUTE_MIN_DELAY=2, NET_IPV4_ROUTE_MAX_DELAY=3, NET_IPV4_ROUTE_GC_THRESH=4, NET_IPV4_ROUTE_MAX_SIZE=5, NET_IPV4_ROUTE_GC_MIN_INTERVAL=6, NET_IPV4_ROUTE_GC_TIMEOUT=7, NET_IPV4_ROUTE_GC_INTERVAL=8, NET_IPV4_ROUTE_REDIRECT_LOAD=9, NET_IPV4_ROUTE_REDIRECT_NUMBER=10, NET_IPV4_ROUTE_REDIRECT_SILENCE=11, NET_IPV4_ROUTE_ERROR_COST=12, NET_IPV4_ROUTE_ERROR_BURST=13, NET_IPV4_ROUTE_GC_ELASTICITY=14, NET_IPV4_ROUTE_MTU_EXPIRES=15, NET_IPV4_ROUTE_MIN_PMTU=16, NET_IPV4_ROUTE_MIN_ADVMSS=17, NET_IPV4_ROUTE_SECRET_INTERVAL=18, NET_IPV4_ROUTE_GC_MIN_INTERVAL_MS=19, }; enum { NET_PROTO_CONF_ALL=-2, NET_PROTO_CONF_DEFAULT=-3 }; enum { NET_IPV4_CONF_FORWARDING=1, NET_IPV4_CONF_MC_FORWARDING=2, NET_IPV4_CONF_PROXY_ARP=3, NET_IPV4_CONF_ACCEPT_REDIRECTS=4, NET_IPV4_CONF_SECURE_REDIRECTS=5, NET_IPV4_CONF_SEND_REDIRECTS=6, NET_IPV4_CONF_SHARED_MEDIA=7, NET_IPV4_CONF_RP_FILTER=8, NET_IPV4_CONF_ACCEPT_SOURCE_ROUTE=9, NET_IPV4_CONF_BOOTP_RELAY=10, NET_IPV4_CONF_LOG_MARTIANS=11, NET_IPV4_CONF_TAG=12, NET_IPV4_CONF_ARPFILTER=13, NET_IPV4_CONF_MEDIUM_ID=14, NET_IPV4_CONF_NOXFRM=15, NET_IPV4_CONF_NOPOLICY=16, NET_IPV4_CONF_FORCE_IGMP_VERSION=17, NET_IPV4_CONF_ARP_ANNOUNCE=18, NET_IPV4_CONF_ARP_IGNORE=19, NET_IPV4_CONF_PROMOTE_SECONDARIES=20, NET_IPV4_CONF_ARP_ACCEPT=21, __NET_IPV4_CONF_MAX }; enum { NET_IPV4_NF_CONNTRACK_MAX=1, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_SYN_SENT=2, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_SYN_RECV=3, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_ESTABLISHED=4, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_FIN_WAIT=5, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_CLOSE_WAIT=6, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_LAST_ACK=7, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_TIME_WAIT=8, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_CLOSE=9, NET_IPV4_NF_CONNTRACK_UDP_TIMEOUT=10, NET_IPV4_NF_CONNTRACK_UDP_TIMEOUT_STREAM=11, NET_IPV4_NF_CONNTRACK_ICMP_TIMEOUT=12, NET_IPV4_NF_CONNTRACK_GENERIC_TIMEOUT=13, NET_IPV4_NF_CONNTRACK_BUCKETS=14, NET_IPV4_NF_CONNTRACK_LOG_INVALID=15, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_MAX_RETRANS=16, NET_IPV4_NF_CONNTRACK_TCP_LOOSE=17, NET_IPV4_NF_CONNTRACK_TCP_BE_LIBERAL=18, NET_IPV4_NF_CONNTRACK_TCP_MAX_RETRANS=19, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_CLOSED=20, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_COOKIE_WAIT=21, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_COOKIE_ECHOED=22, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_ESTABLISHED=23, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_SHUTDOWN_SENT=24, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_SHUTDOWN_RECD=25, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_SHUTDOWN_ACK_SENT=26, NET_IPV4_NF_CONNTRACK_COUNT=27, NET_IPV4_NF_CONNTRACK_CHECKSUM=28, }; enum { NET_IPV6_CONF=16, NET_IPV6_NEIGH=17, NET_IPV6_ROUTE=18, NET_IPV6_ICMP=19, NET_IPV6_BINDV6ONLY=20, NET_IPV6_IP6FRAG_HIGH_THRESH=21, NET_IPV6_IP6FRAG_LOW_THRESH=22, NET_IPV6_IP6FRAG_TIME=23, NET_IPV6_IP6FRAG_SECRET_INTERVAL=24, NET_IPV6_MLD_MAX_MSF=25, }; enum { NET_IPV6_ROUTE_FLUSH=1, NET_IPV6_ROUTE_GC_THRESH=2, NET_IPV6_ROUTE_MAX_SIZE=3, NET_IPV6_ROUTE_GC_MIN_INTERVAL=4, NET_IPV6_ROUTE_GC_TIMEOUT=5, NET_IPV6_ROUTE_GC_INTERVAL=6, NET_IPV6_ROUTE_GC_ELASTICITY=7, NET_IPV6_ROUTE_MTU_EXPIRES=8, NET_IPV6_ROUTE_MIN_ADVMSS=9, NET_IPV6_ROUTE_GC_MIN_INTERVAL_MS=10 }; enum { NET_IPV6_FORWARDING=1, NET_IPV6_HOP_LIMIT=2, NET_IPV6_MTU=3, NET_IPV6_ACCEPT_RA=4, NET_IPV6_ACCEPT_REDIRECTS=5, NET_IPV6_AUTOCONF=6, NET_IPV6_DAD_TRANSMITS=7, NET_IPV6_RTR_SOLICITS=8, NET_IPV6_RTR_SOLICIT_INTERVAL=9, NET_IPV6_RTR_SOLICIT_DELAY=10, NET_IPV6_USE_TEMPADDR=11, NET_IPV6_TEMP_VALID_LFT=12, NET_IPV6_TEMP_PREFERED_LFT=13, NET_IPV6_REGEN_MAX_RETRY=14, NET_IPV6_MAX_DESYNC_FACTOR=15, NET_IPV6_MAX_ADDRESSES=16, NET_IPV6_FORCE_MLD_VERSION=17, NET_IPV6_ACCEPT_RA_DEFRTR=18, NET_IPV6_ACCEPT_RA_PINFO=19, NET_IPV6_ACCEPT_RA_RTR_PREF=20, NET_IPV6_RTR_PROBE_INTERVAL=21, NET_IPV6_ACCEPT_RA_RT_INFO_MAX_PLEN=22, NET_IPV6_PROXY_NDP=23, NET_IPV6_ACCEPT_SOURCE_ROUTE=25, __NET_IPV6_MAX }; enum { NET_IPV6_ICMP_RATELIMIT=1 }; enum { NET_NEIGH_MCAST_SOLICIT=1, NET_NEIGH_UCAST_SOLICIT=2, NET_NEIGH_APP_SOLICIT=3, NET_NEIGH_RETRANS_TIME=4, NET_NEIGH_REACHABLE_TIME=5, NET_NEIGH_DELAY_PROBE_TIME=6, NET_NEIGH_GC_STALE_TIME=7, NET_NEIGH_UNRES_QLEN=8, NET_NEIGH_PROXY_QLEN=9, NET_NEIGH_ANYCAST_DELAY=10, NET_NEIGH_PROXY_DELAY=11, NET_NEIGH_LOCKTIME=12, NET_NEIGH_GC_INTERVAL=13, NET_NEIGH_GC_THRESH1=14, NET_NEIGH_GC_THRESH2=15, NET_NEIGH_GC_THRESH3=16, NET_NEIGH_RETRANS_TIME_MS=17, NET_NEIGH_REACHABLE_TIME_MS=18, __NET_NEIGH_MAX }; enum { NET_DCCP_DEFAULT=1, }; enum { NET_IPX_PPROP_BROADCASTING=1, NET_IPX_FORWARDING=2 }; enum { NET_LLC2=1, NET_LLC_STATION=2, }; enum { NET_LLC2_TIMEOUT=1, }; enum { NET_LLC_STATION_ACK_TIMEOUT=1, }; enum { NET_LLC2_ACK_TIMEOUT=1, NET_LLC2_P_TIMEOUT=2, NET_LLC2_REJ_TIMEOUT=3, NET_LLC2_BUSY_TIMEOUT=4, }; enum { NET_ATALK_AARP_EXPIRY_TIME=1, NET_ATALK_AARP_TICK_TIME=2, NET_ATALK_AARP_RETRANSMIT_LIMIT=3, NET_ATALK_AARP_RESOLVE_TIME=4 }; enum { NET_NETROM_DEFAULT_PATH_QUALITY=1, NET_NETROM_OBSOLESCENCE_COUNT_INITIALISER=2, NET_NETROM_NETWORK_TTL_INITIALISER=3, NET_NETROM_TRANSPORT_TIMEOUT=4, NET_NETROM_TRANSPORT_MAXIMUM_TRIES=5, NET_NETROM_TRANSPORT_ACKNOWLEDGE_DELAY=6, NET_NETROM_TRANSPORT_BUSY_DELAY=7, NET_NETROM_TRANSPORT_REQUESTED_WINDOW_SIZE=8, NET_NETROM_TRANSPORT_NO_ACTIVITY_TIMEOUT=9, NET_NETROM_ROUTING_CONTROL=10, NET_NETROM_LINK_FAILS_COUNT=11, NET_NETROM_RESET=12 }; enum { NET_AX25_IP_DEFAULT_MODE=1, NET_AX25_DEFAULT_MODE=2, NET_AX25_BACKOFF_TYPE=3, NET_AX25_CONNECT_MODE=4, NET_AX25_STANDARD_WINDOW=5, NET_AX25_EXTENDED_WINDOW=6, NET_AX25_T1_TIMEOUT=7, NET_AX25_T2_TIMEOUT=8, NET_AX25_T3_TIMEOUT=9, NET_AX25_IDLE_TIMEOUT=10, NET_AX25_N2=11, NET_AX25_PACLEN=12, NET_AX25_PROTOCOL=13, NET_AX25_DAMA_SLAVE_TIMEOUT=14 }; enum { NET_ROSE_RESTART_REQUEST_TIMEOUT=1, NET_ROSE_CALL_REQUEST_TIMEOUT=2, NET_ROSE_RESET_REQUEST_TIMEOUT=3, NET_ROSE_CLEAR_REQUEST_TIMEOUT=4, NET_ROSE_ACK_HOLD_BACK_TIMEOUT=5, NET_ROSE_ROUTING_CONTROL=6, NET_ROSE_LINK_FAIL_TIMEOUT=7, NET_ROSE_MAX_VCS=8, NET_ROSE_WINDOW_SIZE=9, NET_ROSE_NO_ACTIVITY_TIMEOUT=10 }; enum { NET_X25_RESTART_REQUEST_TIMEOUT=1, NET_X25_CALL_REQUEST_TIMEOUT=2, NET_X25_RESET_REQUEST_TIMEOUT=3, NET_X25_CLEAR_REQUEST_TIMEOUT=4, NET_X25_ACK_HOLD_BACK_TIMEOUT=5, NET_X25_FORWARD=6 }; enum { NET_TR_RIF_TIMEOUT=1 }; enum { NET_DECNET_NODE_TYPE = 1, NET_DECNET_NODE_ADDRESS = 2, NET_DECNET_NODE_NAME = 3, NET_DECNET_DEFAULT_DEVICE = 4, NET_DECNET_TIME_WAIT = 5, NET_DECNET_DN_COUNT = 6, NET_DECNET_DI_COUNT = 7, NET_DECNET_DR_COUNT = 8, NET_DECNET_DST_GC_INTERVAL = 9, NET_DECNET_CONF = 10, NET_DECNET_NO_FC_MAX_CWND = 11, NET_DECNET_MEM = 12, NET_DECNET_RMEM = 13, NET_DECNET_WMEM = 14, NET_DECNET_DEBUG_LEVEL = 255 }; enum { NET_DECNET_CONF_LOOPBACK = -2, NET_DECNET_CONF_DDCMP = -3, NET_DECNET_CONF_PPP = -4, NET_DECNET_CONF_X25 = -5, NET_DECNET_CONF_GRE = -6, NET_DECNET_CONF_ETHER = -7 }; enum { NET_DECNET_CONF_DEV_PRIORITY = 1, NET_DECNET_CONF_DEV_T1 = 2, NET_DECNET_CONF_DEV_T2 = 3, NET_DECNET_CONF_DEV_T3 = 4, NET_DECNET_CONF_DEV_FORWARDING = 5, NET_DECNET_CONF_DEV_BLKSIZE = 6, NET_DECNET_CONF_DEV_STATE = 7 }; enum { NET_SCTP_RTO_INITIAL = 1, NET_SCTP_RTO_MIN = 2, NET_SCTP_RTO_MAX = 3, NET_SCTP_RTO_ALPHA = 4, NET_SCTP_RTO_BETA = 5, NET_SCTP_VALID_COOKIE_LIFE = 6, NET_SCTP_ASSOCIATION_MAX_RETRANS = 7, NET_SCTP_PATH_MAX_RETRANS = 8, NET_SCTP_MAX_INIT_RETRANSMITS = 9, NET_SCTP_HB_INTERVAL = 10, NET_SCTP_PRESERVE_ENABLE = 11, NET_SCTP_MAX_BURST = 12, NET_SCTP_ADDIP_ENABLE = 13, NET_SCTP_PRSCTP_ENABLE = 14, NET_SCTP_SNDBUF_POLICY = 15, NET_SCTP_SACK_TIMEOUT = 16, NET_SCTP_RCVBUF_POLICY = 17, }; enum { NET_BRIDGE_NF_CALL_ARPTABLES = 1, NET_BRIDGE_NF_CALL_IPTABLES = 2, NET_BRIDGE_NF_CALL_IP6TABLES = 3, NET_BRIDGE_NF_FILTER_VLAN_TAGGED = 4, NET_BRIDGE_NF_FILTER_PPPOE_TAGGED = 5, }; enum { NET_IRDA_DISCOVERY=1, NET_IRDA_DEVNAME=2, NET_IRDA_DEBUG=3, NET_IRDA_FAST_POLL=4, NET_IRDA_DISCOVERY_SLOTS=5, NET_IRDA_DISCOVERY_TIMEOUT=6, NET_IRDA_SLOT_TIMEOUT=7, NET_IRDA_MAX_BAUD_RATE=8, NET_IRDA_MIN_TX_TURN_TIME=9, NET_IRDA_MAX_TX_DATA_SIZE=10, NET_IRDA_MAX_TX_WINDOW=11, NET_IRDA_MAX_NOREPLY_TIME=12, NET_IRDA_WARN_NOREPLY_TIME=13, NET_IRDA_LAP_KEEPALIVE_TIME=14, }; enum { FS_NRINODE=1, FS_STATINODE=2, FS_MAXINODE=3, FS_NRDQUOT=4, FS_MAXDQUOT=5, FS_NRFILE=6, FS_MAXFILE=7, FS_DENTRY=8, FS_NRSUPER=9, FS_MAXSUPER=10, FS_OVERFLOWUID=11, FS_OVERFLOWGID=12, FS_LEASES=13, FS_DIR_NOTIFY=14, FS_LEASE_TIME=15, FS_DQSTATS=16, FS_XFS=17, FS_AIO_NR=18, FS_AIO_MAX_NR=19, FS_INOTIFY=20, FS_OCFS2=988, }; enum { FS_DQ_LOOKUPS = 1, FS_DQ_DROPS = 2, FS_DQ_READS = 3, FS_DQ_WRITES = 4, FS_DQ_CACHE_HITS = 5, FS_DQ_ALLOCATED = 6, FS_DQ_FREE = 7, FS_DQ_SYNCS = 8, FS_DQ_WARNINGS = 9, }; enum { DEV_CDROM=1, DEV_HWMON=2, DEV_PARPORT=3, DEV_RAID=4, DEV_MAC_HID=5, DEV_SCSI=6, DEV_IPMI=7, }; enum { DEV_CDROM_INFO=1, DEV_CDROM_AUTOCLOSE=2, DEV_CDROM_AUTOEJECT=3, DEV_CDROM_DEBUG=4, DEV_CDROM_LOCK=5, DEV_CDROM_CHECK_MEDIA=6 }; enum { DEV_PARPORT_DEFAULT=-3 }; enum { DEV_RAID_SPEED_LIMIT_MIN=1, DEV_RAID_SPEED_LIMIT_MAX=2 }; enum { DEV_PARPORT_DEFAULT_TIMESLICE=1, DEV_PARPORT_DEFAULT_SPINTIME=2 }; enum { DEV_PARPORT_SPINTIME=1, DEV_PARPORT_BASE_ADDR=2, DEV_PARPORT_IRQ=3, DEV_PARPORT_DMA=4, DEV_PARPORT_MODES=5, DEV_PARPORT_DEVICES=6, DEV_PARPORT_AUTOPROBE=16 }; enum { DEV_PARPORT_DEVICES_ACTIVE=-3, }; enum { DEV_PARPORT_DEVICE_TIMESLICE=1, }; enum { DEV_MAC_HID_KEYBOARD_SENDS_LINUX_KEYCODES=1, DEV_MAC_HID_KEYBOARD_LOCK_KEYCODES=2, DEV_MAC_HID_MOUSE_BUTTON_EMULATION=3, DEV_MAC_HID_MOUSE_BUTTON2_KEYCODE=4, DEV_MAC_HID_MOUSE_BUTTON3_KEYCODE=5, DEV_MAC_HID_ADB_MOUSE_SENDS_KEYCODES=6 }; enum { DEV_SCSI_LOGGING_LEVEL=1, }; enum { DEV_IPMI_POWEROFF_POWERCYCLE=1, }; enum { ABI_DEFHANDLER_COFF=1, ABI_DEFHANDLER_ELF=2, ABI_DEFHANDLER_LCALL7=3, ABI_DEFHANDLER_LIBCSO=4, ABI_TRACE=5, ABI_FAKE_UTSNAME=6, }; #line 45 "/usr/include/sys/sysctl.h" #line 63 "/usr/include/sys/sysctl.h" extern int sysctl (int *__name, int __nlen, void *__oldval, size_t *__oldlenp, void *__newval, size_t __newlen) ; #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_SYSCTL_H" to "1" ================================================================================ TEST checkSharedLibrary from config.packages.pthread(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:626) TESTING: checkSharedLibrary from config.packages.pthread(config/BuildSystem/config/package.py:626) By default we don't care about checking if the library is shared Popping language C ================================================================================ TEST alternateConfigureLibrary from config.packages.mpe(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.mpe(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.papi(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.papi(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.scientificpython(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.scientificpython(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.fiat(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.fiat(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST configureScalarType from PETSc.options.scalarTypes(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/scalarTypes.py:37) TESTING: configureScalarType from PETSc.options.scalarTypes(config/PETSc/options/scalarTypes.py:37) Choose between real and complex numbers Defined "USE_SCALAR_REAL" to "1" Scalar type is real Pushing language C All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0; int a = isnormal(b); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest.o: In function `main': conftest.c:(.text+0x2c): undefined reference to `isnormal' Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0; int a = isnan(b); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_ISNAN" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0; int a = isinf(b); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_ISINF" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0;int a = _isnan(b); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest.o: In function `main': conftest.c:(.text+0x2c): undefined reference to `_isnan' Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0;int a = _finite(b); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest.o: In function `main': conftest.c:(.text+0x2c): undefined reference to `_finite' Popping language C ================================================================================ TEST configurePrecision from PETSc.options.scalarTypes(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/scalarTypes.py:77) TESTING: configurePrecision from PETSc.options.scalarTypes(config/PETSc/options/scalarTypes.py:77) Set the default real number precision for PETSc objects Defined "USE_REAL_DOUBLE" to "1" Defined make macro "PETSC_SCALAR_SIZE" to "64" Precision is double ================================================================================ TEST alternateConfigureLibrary from config.packages.opencl(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.opencl(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.viennacl(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.viennacl(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.cuda(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.cuda(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.cusp(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.cusp(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST locateCMake from config.packages.cmake(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/cmake.py:32) TESTING: locateCMake from config.packages.cmake(config/BuildSystem/config/packages/cmake.py:32) Looking for default CMake executable Checking for program /opt/FJSVtclang/check/cmake...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/cmake...not found Checking for program /opt/kusu/bin/cmake...not found Checking for program /opt/kusu/sbin/cmake...not found Checking for program /usr/pgsql-9.0/bin/cmake...not found Checking for program /usr/local/bin/cmake...not found Checking for program /bin/cmake...not found Checking for program /usr/bin/cmake...not found Checking for program /home/hp150306/t00196/bin/cmake...not found Checking for program /home/hp150306/t00196/shortcut/cmake...not found Checking for program /opt/FJSVxosmmm/sbin/cmake...not found Checking for program /home/hp150306/t00196/cmake...not found Checking for program /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/bin/win32fe/cmake...not found ================================================================================ TEST alternateConfigureLibrary from config.packages.metis(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.metis(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.parmetis(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.parmetis(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.Zoltan(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.Zoltan(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.fblaslapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.fblaslapack(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.f2cblaslapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.f2cblaslapack(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST configureLibrary from config.packages.BlasLapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/BlasLapack.py:333) TESTING: configureLibrary from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:333) ================================================================================ Checking for a functional BLAS and LAPACK in User specified BLAS/LAPACK library ================================================================================ TEST checkLib from config.packages.BlasLapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/BlasLapack.py:100) TESTING: checkLib from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:100) Checking for BLAS and LAPACK symbols Checking for functions [ddot_] in library ['-SSL2'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot_(); static void _check_ddot_() { ddot_(); } int main() { _check_ddot_();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Checking for functions [dgetrs_] in library ['-SSL2'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgetrs_(); static void _check_dgetrs_() { dgetrs_(); } int main() { _check_dgetrs_();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Checking for functions [dgeev_] in library ['-SSL2'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgeev_(); static void _check_dgeev_() { dgeev_(); } int main() { _check_dgeev_();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Found Fortran mangling on BLAS/LAPACK which is underscore Defined "BLASLAPACK_UNDERSCORE" to "1" ================================================================================ TEST check64BitBLASIndices from config.packages.BlasLapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/BlasLapack.py:466) TESTING: check64BitBLASIndices from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:466) Check for and use 64bit integer blas ================================================================================ TEST checkESSL from config.packages.BlasLapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/BlasLapack.py:396) TESTING: checkESSL from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:396) Check for the IBM ESSL library Checking for functions [iessl] in library ['-SSL2'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char iessl(); static void _check_iessl() { iessl(); } int main() { _check_iessl();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o: In function `_check_iessl': conftest.c:(.text+0x4): undefined reference to `iessl' Popping language C ================================================================================ TEST checkPESSL from config.packages.BlasLapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/BlasLapack.py:408) TESTING: checkPESSL from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:408) Check for the IBM PESSL library - and error out - if used instead of ESSL Checking for functions [ipessl] in library ['-SSL2'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ipessl(); static void _check_ipessl() { ipessl(); } int main() { _check_ipessl();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o: In function `_check_ipessl': conftest.c:(.text+0x4): undefined reference to `ipessl' Popping language C ================================================================================ TEST checkMKL from config.packages.BlasLapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/BlasLapack.py:402) TESTING: checkMKL from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:402) Check for Intel MKL library Checking for functions [mkl_set_num_threads] in library ['-SSL2'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char mkl_set_num_threads(); static void _check_mkl_set_num_threads() { mkl_set_num_threads(); } int main() { _check_mkl_set_num_threads();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o: In function `_check_mkl_set_num_threads': conftest.c:(.text+0x4): undefined reference to `mkl_set_num_threads' Popping language C ================================================================================ TEST checkMissing from config.packages.BlasLapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/BlasLapack.py:431) TESTING: checkMissing from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:431) Check for missing LAPACK routines Checking for functions [dtrsen_ dgerfs_ dgges_ dtgsen_ dgesvd_ dgetrf_ dgetrs_ dgeev_ dgelss_ dsyev_ dsyevx_ dsygv_ dsygvx_ dpotrf_ dpotrs_ dstebz_ dpttrf_ dpttrs_ dstein_ dorgqr_ dgeqrf_ dgesv_ dhseqr_ dsteqr_] in library ['-SSL2'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dtrsen_(); static void _check_dtrsen_() { dtrsen_(); } char dgerfs_(); static void _check_dgerfs_() { dgerfs_(); } char dgges_(); static void _check_dgges_() { dgges_(); } char dtgsen_(); static void _check_dtgsen_() { dtgsen_(); } char dgesvd_(); static void _check_dgesvd_() { dgesvd_(); } char dgetrf_(); static void _check_dgetrf_() { dgetrf_(); } char dgetrs_(); static void _check_dgetrs_() { dgetrs_(); } char dgeev_(); static void _check_dgeev_() { dgeev_(); } char dgelss_(); static void _check_dgelss_() { dgelss_(); } char dsyev_(); static void _check_dsyev_() { dsyev_(); } char dsyevx_(); static void _check_dsyevx_() { dsyevx_(); } char dsygv_(); static void _check_dsygv_() { dsygv_(); } char dsygvx_(); static void _check_dsygvx_() { dsygvx_(); } char dpotrf_(); static void _check_dpotrf_() { dpotrf_(); } char dpotrs_(); static void _check_dpotrs_() { dpotrs_(); } char dstebz_(); static void _check_dstebz_() { dstebz_(); } char dpttrf_(); static void _check_dpttrf_() { dpttrf_(); } char dpttrs_(); static void _check_dpttrs_() { dpttrs_(); } char dstein_(); static void _check_dstein_() { dstein_(); } char dorgqr_(); static void _check_dorgqr_() { dorgqr_(); } char dgeqrf_(); static void _check_dgeqrf_() { dgeqrf_(); } char dgesv_(); static void _check_dgesv_() { dgesv_(); } char dhseqr_(); static void _check_dhseqr_() { dhseqr_(); } char dsteqr_(); static void _check_dsteqr_() { dsteqr_(); } int main() { _check_dtrsen_(); _check_dgerfs_(); _check_dgges_(); _check_dtgsen_(); _check_dgesvd_(); _check_dgetrf_(); _check_dgetrs_(); _check_dgeev_(); _check_dgelss_(); _check_dsyev_(); _check_dsyevx_(); _check_dsygv_(); _check_dsygvx_(); _check_dpotrf_(); _check_dpotrs_(); _check_dstebz_(); _check_dpttrf_(); _check_dpttrs_(); _check_dstein_(); _check_dorgqr_(); _check_dgeqrf_(); _check_dgesv_(); _check_dhseqr_(); _check_dsteqr_();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C ================================================================================ TEST checklsame from config.packages.BlasLapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/BlasLapack.py:444) TESTING: checklsame from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:444) Do the BLAS/LAPACK libraries have a valid lsame() function with correction binding. Lion and xcode 4.2 do not Checking for functions [lsame_] in library ['-SSL2'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char lsame_(); static void _check_lsame_() { lsame_(); } int main() { _check_lsame_();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C ================================================================================ TEST checksdotreturnsdouble from config.packages.BlasLapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/BlasLapack.py:501) TESTING: checksdotreturnsdouble from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:501) Determines if BLAS sdot routine returns a float or a double Checking if sdot() returns a float or a double Pushing language C All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *output = fopen("runtimetestoutput","w"); extern float sdot_(int*,float*,int *,float*,int*); float x1[1] = {3.0}; int one1 = 1; float sdotresult = sdot_(&one1,x1,&one1,x1,&one1); fprintf(output, " '--known-sdot-returns-double=%d',\n",(sdotresult != 9.0)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack/conftest.o -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack/conftest Popping language C Checking if snrm() returns a float or a double Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *output = fopen("runtimetestoutput","w"); extern float snrm2_(int*,float*,int*); float x2[1] = {3.0}; int one2 = 1; float normresult = snrm2_(&one2,x2,&one2); fprintf(output, " '--known-snrm2-returns-double=%d',\n",(normresult != 3.0)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack/conftest.o -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack/conftest Popping language C ================================================================================ TEST alternateConfigureLibrary from config.packages.SuperLU_MT(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.SuperLU_MT(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.pARMS(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.pARMS(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.SuiteSparse(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.SuiteSparse(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.ml(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.ml(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.spai(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.spai(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.mkl_cpardiso(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.mkl_cpardiso(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.sundials(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.sundials(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.elemental(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.elemental(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST configureRegression from PETSc.Regression(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Regression.py:33) TESTING: configureRegression from PETSc.Regression(config/PETSc/Regression.py:33) Output a file listing the jobs that should be run by the PETSc buildtest Defined make macro "TEST_RUNS" to "C Fortran SSL OPENMP Cxx F90 F90_NoComplex F2003 Fortran_NoComplex C_NoComplex" ================================================================================ TEST alternateConfigureLibrary from config.packages.PaStiX(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.PaStiX(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default Pushing language C ================================================================================ TEST configureLibrary from config.packages.scalapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:572) TESTING: configureLibrary from config.packages.scalapack(config/BuildSystem/config/package.py:572) Find an installation and check if it can work with PETSc ================================================================================== Checking for a functional scalapack Checking for library in User specified SCALAPACK libraries: ['-SCALAPACK'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [pssytrd_] in library ['-SCALAPACK'] ['-SSL2'] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char pssytrd_(); static void _check_pssytrd_() { pssytrd_(); } int main() { _check_pssytrd_();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -SCALAPACK -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Checking for headers User specified SCALAPACK libraries: [] ================================================================================ TEST checkSharedLibrary from config.packages.scalapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:626) TESTING: checkSharedLibrary from config.packages.scalapack(config/BuildSystem/config/package.py:626) By default we don't care about checking if the library is shared Popping language C ================================================================================ TEST alternateConfigureLibrary from config.packages.MUMPS(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.MUMPS(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.mkl_pardiso(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.mkl_pardiso(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.SuperLU_DIST(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.SuperLU_DIST(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.SuperLU(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.SuperLU(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.Chombo(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.Chombo(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default Checking for functions [dgels_] in library ['-SSL2'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgels_(); static void _check_dgels_() { dgels_(); } int main() { _check_dgels_();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Found dgels() in Lapack library as needed by hypre Pushing language C ================================================================================ TEST configureLibrary from config.packages.hypre(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:572) TESTING: configureLibrary from config.packages.hypre(config/BuildSystem/config/package.py:572) Find an installation and check if it can work with PETSc ================================================================================== Checking for a functional hypre Checking for library in User specified root directory HYPRE: ['/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib/libHYPRE.a', '-ltrtmetcpp', '-L/opt/FJSVpxtof/sparc64fx/lib64', '-L/opt/FJSVtclang/GM-1.2.0-20/lib64', '-L//opt/FJSVtclang/GM-1.2.0-20/lib64', '-L/opt/FJSVxosmmm/lib64', '-lmpi_cxx', '-lfjdemgl', '-lstd_mt', '-lpthread', '-lstdc++'] Contents: ['lib', 'include'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [HYPRE_IJMatrixCreate] in library ['/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib/libHYPRE.a', '-ltrtmetcpp', '-L/opt/FJSVpxtof/sparc64fx/lib64', '-L/opt/FJSVtclang/GM-1.2.0-20/lib64', '-L//opt/FJSVtclang/GM-1.2.0-20/lib64', '-L/opt/FJSVxosmmm/lib64', '-lmpi_cxx', '-lfjdemgl', '-lstd_mt', '-lpthread', '-lstdc++'] ['-SSL2'] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char HYPRE_IJMatrixCreate(); static void _check_HYPRE_IJMatrixCreate() { HYPRE_IJMatrixCreate(); } int main() { _check_HYPRE_IJMatrixCreate();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -Wl,-rpath,/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -L/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -lHYPRE -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_LIBHYPRE" to "1" Defined "HAVE_LIBTRTMETCPP" to "1" Defined "HAVE_LIBMPI_CXX" to "1" Defined "HAVE_LIBFJDEMGL" to "1" Defined "HAVE_LIBSTD_MT" to "1" Defined "HAVE_LIBPTHREAD" to "1" Defined "HAVE_LIBSTDC__" to "1" Popping language C Checking for headers User specified root directory HYPRE: ['/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include'] Pushing language C ================================================================================ TEST checkInclude from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['HYPRE.h'] in ['/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include'] Checking include with compiler flags var CPPFLAGS ['/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include', '/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu'] Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include/HYPRE.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Found header files ['HYPRE.h'] in ['/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include'] Popping language C ================================================================================ TEST checkSharedLibrary from config.packages.hypre(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:626) TESTING: checkSharedLibrary from config.packages.hypre(config/BuildSystem/config/package.py:626) By default we don't care about checking if the library is shared Popping language C ================================================================================ TEST alternateConfigureLibrary from config.packages.Trilinos(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.Trilinos(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST configureRTLDDefault from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:774) TESTING: configureRTLDDefault from PETSc.Configure(config/PETSc/Configure.py:774) All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c Possible ERROR while running compiler: exit code 512 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c", line 4: error: identifier "RTLD_DEFAULT" is undefined void *ptr = RTLD_DEFAULT; ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include void *ptr = RTLD_DEFAULT; int main() { ; return 0; } ================================================================================ TEST configurePrefetch from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:624) TESTING: configurePrefetch from PETSc.Configure(config/PETSc/Configure.py:624) Sees if there are any prefetch functions supported Executing: uname -s stdout: Linux Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c", line 3: catastrophic error: cannot open source file "xmmintrin.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { void *v = 0;_mm_prefetch((const char*)v,_MM_HINT_NTA); ; return 0; } Compile failed inside link Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c", line 3: catastrophic error: cannot open source file "xmmintrin.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { void *v = 0;_mm_prefetch(v,_MM_HINT_NTA); ; return 0; } Compile failed inside link Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { void *v = 0;__builtin_prefetch(v,0,0); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "Prefetch(a,b,c)" to "__builtin_prefetch((a),(b),(c))" Defined "PREFETCH_HINT_NTA" to "0" Defined "PREFETCH_HINT_T0" to "3" Defined "PREFETCH_HINT_T1" to "2" Defined "PREFETCH_HINT_T2" to "1" Popping language C ================================================================================ TEST configureUnused from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:685) TESTING: configureUnused from PETSc.Configure(config/PETSc/Configure.py:685) Sees if __attribute((unused)) is supported Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" __attribute((unused)) static int myfunc(__attribute((unused)) void *name){ return 1;} int main() { int i = 0; int j = myfunc(&i); typedef void* atype; __attribute((unused)) atype a; ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "UNUSED" to "__attribute((unused))" Popping language C ================================================================================ TEST configureDeprecated from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:703) TESTING: configureDeprecated from PETSc.Configure(config/PETSc/Configure.py:703) Check if __attribute((deprecated)) is supported Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c", line 3: warning: function "myfunc" was declared but never referenced __attribute((deprecated)) static int myfunc(void) { return 1;} ^ Source: #include "confdefs.h" #include "conffix.h" __attribute((deprecated)) static int myfunc(void) { return 1;} int main() { ; return 0; } Defined "DEPRECATED(why)" to "__attribute((deprecated))" Popping language C ================================================================================ TEST configureIsatty from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:697) TESTING: configureIsatty from PETSc.Configure(config/PETSc/Configure.py:697) Check if the Unix C function isatty() works correctly Actually just assumes it does not work correctly on batch systems Defined "USE_ISATTY" to "1" ================================================================================ TEST configureExpect from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:723) TESTING: configureExpect from PETSc.Configure(config/PETSc/Configure.py:723) Sees if the __builtin_expect directive is supported Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { if (__builtin_expect(0,1)) return 1;; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_BUILTIN_EXPECT" to "1" Popping language C ================================================================================ TEST configureFunctionName from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:730) TESTING: configureFunctionName from PETSc.Configure(config/PETSc/Configure.py:730) Sees if the compiler supports __func__ or a variant. Falls back on __FUNCT__ which PETSc source defines, but most users do not, thus stack traces through user code are better when the compiler's variant is used. Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { if (__func__[0] != 'm') return 1;; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Defined "FUNCTION_NAME_C" to "__func__" Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { if (__func__[0] != 'm') return 1;; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language Cxx Defined "FUNCTION_NAME_CXX" to "__func__" ================================================================================ TEST configureIntptrt from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:752) TESTING: configureIntptrt from PETSc.Configure(config/PETSc/Configure.py:752) Determine what to use for uintptr_t Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c", line 6: warning: variable "i" was declared but never referenced int x; uintptr_t i = (uintptr_t)&x;; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { int x; uintptr_t i = (uintptr_t)&x;; return 0; } Defined "UINTPTR_T" to "uintptr_t" Popping language C ================================================================================ TEST configureSolaris from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:779) TESTING: configureSolaris from PETSc.Configure(config/PETSc/Configure.py:779) Solaris specific stuff ================================================================================ TEST configureLinux from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:792) TESTING: configureLinux from PETSc.Configure(config/PETSc/Configure.py:792) Linux specific stuff Defined "HAVE_DOUBLE_ALIGN_MALLOC" to "1" ================================================================================ TEST configureWin32 from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:798) TESTING: configureWin32 from PETSc.Configure(config/PETSc/Configure.py:798) Win32 non-cygwin specific stuff Checking for functions [GetComputerName] in library ['Kernel32.lib'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c", line 4: catastrophic error: cannot open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_GetComputerName() { GetComputerName(NULL,NULL);; } int main() { _check_GetComputerName();; return 0; } Compile failed inside link Popping language C Checking for functions [GetComputerName] in library ['kernel32'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c", line 4: catastrophic error: cannot open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_GetComputerName() { GetComputerName(NULL,NULL);; } int main() { _check_GetComputerName();; return 0; } Compile failed inside link Popping language C Checking for functions [GetUserName] in library ['Advapi32.lib'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c", line 4: catastrophic error: cannot open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_GetUserName() { GetUserName(NULL,NULL);; } int main() { _check_GetUserName();; return 0; } Compile failed inside link Popping language C Checking for functions [GetUserName] in library ['advapi32'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c", line 4: catastrophic error: cannot open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_GetUserName() { GetUserName(NULL,NULL);; } int main() { _check_GetUserName();; return 0; } Compile failed inside link Popping language C Checking for functions [GetDC] in library ['User32.lib'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c", line 4: catastrophic error: cannot open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_GetDC() { GetDC(0);; } int main() { _check_GetDC();; return 0; } Compile failed inside link Popping language C Checking for functions [GetDC] in library ['user32'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c", line 4: catastrophic error: cannot open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_GetDC() { GetDC(0);; } int main() { _check_GetDC();; return 0; } Compile failed inside link Popping language C Checking for functions [CreateCompatibleDC] in library ['Gdi32.lib'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c", line 4: catastrophic error: cannot open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_CreateCompatibleDC() { CreateCompatibleDC(0);; } int main() { _check_CreateCompatibleDC();; return 0; } Compile failed inside link Popping language C Checking for functions [CreateCompatibleDC] in library ['gdi32'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c", line 4: catastrophic error: cannot open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_CreateCompatibleDC() { CreateCompatibleDC(0);; } int main() { _check_CreateCompatibleDC();; return 0; } Compile failed inside link Popping language C Checking for type: int32_t Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c", line 13: warning: variable "a" was declared but never referenced int32_t a;; ^ Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { int32_t a;; return 0; } int32_t found Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c", line 6: warning: variable "u" was declared but never referenced uid_t u; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { uid_t u; ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c", line 8: warning: variable "a" was declared but never referenced int a=R_OK; ^ Source: #include "confdefs.h" #include "conffix.h" #if defined(PETSC_HAVE_UNISTD_H) #include #endif int main() { int a=R_OK; ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int a=0; if (S_ISDIR(a)){} ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c", line 3: catastrophic error: cannot open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { LARGE_INTEGER a; DWORD b=a.u.HighPart; ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c", line 3: catastrophic error: cannot open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { int flags = O_BINARY;; return 0; } Defined "PATH_SEPARATOR" to "':'" Defined "REPLACE_DIR_SEPARATOR" to "'\\'" Defined "DIR_SEPARATOR" to "'/'" Defined "DIR" to ""/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3"" ================================================================================ TEST configureCygwinBrokenPipe from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:868) TESTING: configureCygwinBrokenPipe from PETSc.Configure(config/PETSc/Configure.py:868) Cygwin version <= 1.7.18 had issues with pipes and long commands invoked from gnu-make http://cygwin.com/ml/cygwin/2013-05/msg00340.html Executing: uname -s stdout: Linux ================================================================================ TEST configureDefaultArch from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:884) TESTING: configureDefaultArch from PETSc.Configure(config/PETSc/Configure.py:884) ================================================================================ TEST configureScript from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:901) TESTING: configureScript from PETSc.Configure(config/PETSc/Configure.py:901) Output a script in the conf directory which will reproduce the configuration ================================================================================ TEST configureInstall from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:938) TESTING: configureInstall from PETSc.Configure(config/PETSc/Configure.py:938) Setup the directories for installation Defined make rule "shared_install" with dependencies "" and code ['- at echo "Now to install the libraries do:"', '- at echo "make PETSC_DIR=${PETSC_DIR} PETSC_ARCH=${PETSC_ARCH} install"', '- at echo "========================================="'] ================================================================================ TEST configureGCOV from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:950) TESTING: configureGCOV from PETSc.Configure(config/PETSc/Configure.py:950) ================================================================================ TEST configureFortranFlush from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:955) TESTING: configureFortranFlush from PETSc.Configure(config/PETSc/Configure.py:955) Checking for functions [flush_] in library [''] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char flush_(); static void _check_flush_() { flush_(); } int main() { _check_flush_();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Defined "HAVE_FLUSH" to "1" ================================================================================ TEST configureAtoll from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:680) TESTING: configureAtoll from PETSc.Configure(config/PETSc/Configure.py:680) Checks if atoll exists Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #define _POSIX_C_SOURCE 200112L #include int main() { long v = atoll("25"); return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_ATOLL" to "1" Defined make rule "remote" with dependencies "" and code [] Defined make rule "remoteclean" with dependencies "" and code [] Pushing language C Defined make macro "CC_FLAGS" to "-Xg -O0 -Kopenmp " Popping language C Pushing language Cxx Defined make macro "CXX_FLAGS" to "-Xg -O0 -Kopenmp " Popping language Cxx Defined make macro "CPP_FLAGS" to "" Pushing language C Defined make macro "PCC" to "mpifcc" Defined make macro "PCC_FLAGS" to "-Xg -O0 -Kopenmp " Popping language C Defined make macro "CC_SUFFIX" to "o" Pushing language C Defined make macro "PCC_LINKER" to "mpifcc" Defined make macro "PCC_LINKER_FLAGS" to " -Xg -O0 -Kopenmp" Popping language C Defined make macro "CC_LINKER_SUFFIX" to "" Pushing language FC Defined "HAVE_FORTRAN" to "1" Defined make macro "FPP_FLAGS" to "" Defined make macro "FC_FLAGS" to "-X9 -O0 -Kopenmp " Popping language FC Defined make macro "FC_SUFFIX" to "o" Pushing language FC Executing: mpifrt -V Defined make macro "FC_LINKER" to "mpifrt" Defined make macro "FC_LINKER_FLAGS" to " -X9 -O0 -Kopenmp" Popping language FC Defined make macro "FC_MODULE_FLAG" to "-I" Defined make macro "FC_MODULE_OUTPUT_FLAG" to "-M" Pushing language C Defined make macro "SL_LINKER" to "mpifcc" Defined make macro "SL_LINKER_FLAGS" to "${PCC_LINKER_FLAGS}" Popping language C Defined make macro "SL_LINKER_SUFFIX" to "" Defined "SLSUFFIX" to """" Defined make macro "SL_LINKER_LIBS" to "${PETSC_EXTERNAL_LIB_BASIC}" Defined make macro "PETSC_LANGUAGE" to "CONLY" Defined make macro "PETSC_SCALAR" to "real" Defined make macro "PETSC_PRECISION" to "double" Executing: CC -VV Defined "USE_SOCKET_VIEWER" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { setsockopt(0,SOL_SOCKET,SO_REUSEADDR,0,0); return 0; } Defined "HAVE_SO_REUSEADDR" to "1" Defined "HAVE_HYPRE" to "1" Defined make macro "HYPRE_LIB" to "-Wl,-rpath,/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -L/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -lHYPRE -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++" Defined make macro "HYPRE_INCLUDE" to "-I/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include" Defined make macro "SCALAPACK_LIB" to "-SCALAPACK" Defined make macro "SCALAPACK_INCLUDE" to "" Defined "HAVE_BLASLAPACK" to "1" Defined make macro "BLASLAPACK_LIB" to "-SSL2" Defined make macro "BLASLAPACK_INCLUDE" to "" Defined "HAVE_PTHREAD" to "1" Defined make macro "PTHREAD_LIB" to "" Defined make macro "PTHREAD_INCLUDE" to "" Defined "HAVE_OPENMP" to "1" Defined make macro "OPENMP_LIB" to "" Defined make macro "OPENMP_INCLUDE" to "" Defined "HAVE_SSL" to "1" Defined make macro "SSL_LIB" to "-lssl -lcrypto" Defined make macro "SSL_INCLUDE" to "" Defined "HAVE_MPI" to "1" Defined make macro "MPI_LIB" to "" Defined make macro "MPI_INCLUDE" to "-I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu" Defined make macro "PETSC_WITH_EXTERNAL_LIB" to "-L/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-3.6.3_patch_debug/lib -lpetsc -Wl,-rpath,/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -L/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -lHYPRE -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -SCALAPACK -SSL2 -lssl -lcrypto -ltrtmetcpp -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl " Defined make macro "PETSC_EXTERNAL_LIB_BASIC" to "-Wl,-rpath,/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -L/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -lHYPRE -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -SCALAPACK -SSL2 -lssl -lcrypto -ltrtmetcpp -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl " Defined make macro "PETSC_CC_INCLUDES" to "-I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/include -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-3.6.3_patch_debug/include -I/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu" Pushing language FC Popping language FC Pushing language FC Popping language FC Pushing language FC Popping language FC Pushing language FC Popping language FC Defined make macro "PETSC_FC_INCLUDES" to "-I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/include -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-3.6.3_patch_debug/include -I/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu" Defined make macro "DESTDIR" to "/home/hp150306/t00196/lib/petsc-3.6.3_patch_debug" Defined "LIB_DIR" to ""/home/hp150306/t00196/lib/petsc-3.6.3_patch_debug/lib"" Defined make macro "LIBNAME" to "${INSTALL_LIB_DIR}/libpetsc.${AR_LIB_SUFFIX}" Defined make macro "SHLIBS" to "libpetsc" Defined make macro "PETSC_LIB_BASIC" to "-lpetsc" Defined make macro "PETSC_KSP_LIB_BASIC" to "-lpetsc" Defined make macro "PETSC_TS_LIB_BASIC" to "-lpetsc" Defined make macro "PETSC_TAO_LIB_BASIC" to "-lpetsc" Defined "USE_SINGLE_LIBRARY" to "1" Defined make macro "PETSC_SYS_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_VEC_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_MAT_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_DM_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_KSP_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_SNES_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_TS_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_TAO_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_CHARACTERISTIC_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_CONTRIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "CONFIGURE_OPTIONS" to "--with-cc=mpifcc --with-cxx=mpiFCC --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS=\"-Xg -O0\" --CXX=mpiFCC --CXXFLAGS=\"-Xg -O0\" --FC=mpifrt --FFLAGS=\"-X9 -O0\" --LD_SHARED= --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 --with-scalapack-lib=-SCALAPACK --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_patch_debug --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 --with-hypre=1 --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4" Pushing language C Popping language C Pushing language FC Popping language FC Pushing language C Popping language C Pushing language FC Popping language FC Skipping cmakeboot due to old python version: (2, 6, 2, 'final', 0) Pushing language C Popping language C Pushing language FC Popping language FC ================================================================================ **** petsc-3.6.3_patch_debug/lib/petsc/conf/petscvariables **** FC_DEFINE_FLAG = -D FAST_AR_FLAGS = Scq AR_FLAGS = cr FC_MODULE_OUTPUT_FLAG = -M PETSC_LANGUAGE = CONLY FC_LINKER_FLAGS = -X9 -O0 -Kopenmp LIBNAME = ${INSTALL_LIB_DIR}/libpetsc.${AR_LIB_SUFFIX} SL_LINKER = mpifcc CC_FLAGS = -Xg -O0 -Kopenmp PETSC_LIB = ${PETSC_WITH_EXTERNAL_LIB} PETSC_PRECISION = double OPENMP_LIB = FC_FLAGS = -X9 -O0 -Kopenmp BLASLAPACK_LIB = -SSL2 PETSC_MAT_LIB = ${PETSC_WITH_EXTERNAL_LIB} PCC = mpifcc SL_LINKER_LIBS = ${PETSC_EXTERNAL_LIB_BASIC} MPI_LIB = SSL_LIB = -lssl -lcrypto PETSC_EXTERNAL_LIB_BASIC = -Wl,-rpath,/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -L/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -lHYPRE -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -SCALAPACK -SSL2 -lssl -lcrypto -ltrtmetcpp -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl SL_LINKER_FLAGS = ${PCC_LINKER_FLAGS} CC_SUFFIX = o OPENMP_INCLUDE = SCALAPACK_INCLUDE = SHLIBS = libpetsc CONFIGURE_OPTIONS = --with-cc=mpifcc --with-cxx=mpiFCC --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS=\"-Xg -O0\" --CXX=mpiFCC --CXXFLAGS=\"-Xg -O0\" --FC=mpifrt --FFLAGS=\"-X9 -O0\" --LD_SHARED= --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 --with-scalapack-lib=-SCALAPACK --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_patch_debug --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 --with-hypre=1 --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4 PETSC_CHARACTERISTIC_LIB = ${PETSC_WITH_EXTERNAL_LIB} PTHREAD_LIB = PETSC_SCALAR = real PETSC_FC_INCLUDES = -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/include -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-3.6.3_patch_debug/include -I/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu CPP_FLAGS = PETSC_KSP_LIB_BASIC = -lpetsc FPP_FLAGS = HYPRE_INCLUDE = -I/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include FC_LINKER = mpifrt HYPRE_LIB = -Wl,-rpath,/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -L/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -lHYPRE -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ PETSC_KSP_LIB = ${PETSC_WITH_EXTERNAL_LIB} CXX_FLAGS = -Xg -O0 -Kopenmp PETSC_LIB_BASIC = -lpetsc PCC_LINKER_FLAGS = -Xg -O0 -Kopenmp SSL_INCLUDE = PETSC_CONTRIB = ${PETSC_WITH_EXTERNAL_LIB} PETSC_CC_INCLUDES = -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/include -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-3.6.3_patch_debug/include -I/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu PCC_LINKER = mpifcc PETSC_SYS_LIB = ${PETSC_WITH_EXTERNAL_LIB} PCC_FLAGS = -Xg -O0 -Kopenmp PTHREAD_INCLUDE = PETSC_TS_LIB = ${PETSC_WITH_EXTERNAL_LIB} PETSC_TAO_LIB_BASIC = -lpetsc BLASLAPACK_INCLUDE = PETSC_TS_LIB_BASIC = -lpetsc PETSC_VEC_LIB = ${PETSC_WITH_EXTERNAL_LIB} CC_LINKER_SUFFIX = SL_LINKER_SUFFIX = PETSC_DM_LIB = ${PETSC_WITH_EXTERNAL_LIB} DESTDIR = /home/hp150306/t00196/lib/petsc-3.6.3_patch_debug FC_MODULE_FLAG = -I SCALAPACK_LIB = -SCALAPACK PETSC_WITH_EXTERNAL_LIB = -L/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-3.6.3_patch_debug/lib -lpetsc -Wl,-rpath,/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -L/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -lHYPRE -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -SCALAPACK -SSL2 -lssl -lcrypto -ltrtmetcpp -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl PETSC_TAO_LIB = ${PETSC_WITH_EXTERNAL_LIB} MPI_INCLUDE = -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu FC_SUFFIX = o PETSC_SNES_LIB = ${PETSC_WITH_EXTERNAL_LIB} SHELL = /bin/sh GREP = /bin/grep MV = /bin/mv PYTHON = /usr/bin/python MKDIR = /bin/mkdir -p SEDINPLACE = /bin/sed -i SED = /bin/sed DIFF = /usr/bin/diff -w GZIP = /bin/gzip RM = /bin/rm -f CP = /bin/cp CC_LINKER_SLFLAG = -Wl,-rpath, CC = mpifcc RANLIB = /usr/bin/ranlib DYNAMICLINKER = mpifcc CXX = mpiFCC FC = mpifrt CXXCPP = mpiFCC -E FC_LINKER_SLFLAG = -Wl,-rpath, CPP = mpifcc -E AR_LIB_SUFFIX = a LD_SHARED = /usr/bin/ar AR = /usr/bin/ar DIR = /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 PETSC_INDEX_SIZE = 32 OMAKE = /usr/bin/gmake --no-print-directory MAKE_IS_GNUMAKE = 1 MAKE = /usr/bin/gmake MAKE_NP = 7 OMAKE_PRINTDIR = /usr/bin/gmake --print-directory MPIEXEC = mpiexec PETSC_SCALAR_SIZE = 64 BUILDSHAREDLIB = no DSYMUTIL = true TEST_RUNS = C Fortran SSL OPENMP Cxx F90 F90_NoComplex F2003 Fortran_NoComplex C_NoComplex **** petsc-3.6.3_patch_debug/lib/petsc/conf/petscrules **** shared_install: - at echo "Now to install the libraries do:" - at echo "make PETSC_DIR=${PETSC_DIR} PETSC_ARCH=${PETSC_ARCH} install" - at echo "=========================================" remoteclean: remote: libc: ${LIBNAME}(${OBJSC}) libcxx: ${LIBNAME}(${OBJSCXX}) libcu: ${LIBNAME}(${OBJSCU}) libf: ${OBJSF} -${AR} ${AR_FLAGS} ${LIBNAME} ${OBJSF} .F.a: ${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FC_FLAGS} ${FFLAGS} ${FCPPFLAGS} $< -${AR} ${AR_FLAGS} ${LIBNAME} $*.o -${RM} $*.o .f.o .f90.o .f95.o: ${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FC_FLAGS} ${FFLAGS} -o $@ $< .f.a: ${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FC_FLAGS} ${FFLAGS} $< -${AR} ${AR_FLAGS} ${LIBNAME} $*.o -${RM} $*.o .F.o .F90.o .F95.o: ${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FC_FLAGS} ${FFLAGS} ${FCPPFLAGS} -o $@ $< shared_arch: petsc4py-build: petsc4py-install: mpi4py-build: mpi4py-install: **** petsc-3.6.3_patch_debug/include/petscconf.h **** #if !defined(INCLUDED_UNKNOWN) #define INCLUDED_UNKNOWN #ifndef IS_COLORING_MAX #define IS_COLORING_MAX 65535 #endif #ifndef STDC_HEADERS #define STDC_HEADERS 1 #endif #ifndef MPIU_COLORING_VALUE #define MPIU_COLORING_VALUE MPI_UNSIGNED_SHORT #endif #ifndef PETSC_UINTPTR_T #define PETSC_UINTPTR_T uintptr_t #endif #ifndef PETSC_HAVE_PTHREAD #define PETSC_HAVE_PTHREAD 1 #endif #ifndef PETSC_HAVE_OPENMP #define PETSC_HAVE_OPENMP 1 #endif #ifndef PETSC_DEPRECATED #define PETSC_DEPRECATED(why) __attribute((deprecated)) #endif #ifndef PETSC_REPLACE_DIR_SEPARATOR #define PETSC_REPLACE_DIR_SEPARATOR '\\' #endif #ifndef PETSC_HAVE_SO_REUSEADDR #define PETSC_HAVE_SO_REUSEADDR 1 #endif #ifndef PETSC_HAVE_MPI #define PETSC_HAVE_MPI 1 #endif #ifndef PETSC_PREFETCH_HINT_T2 #define PETSC_PREFETCH_HINT_T2 1 #endif #ifndef PETSC_PREFETCH_HINT_T0 #define PETSC_PREFETCH_HINT_T0 3 #endif #ifndef PETSC_PREFETCH_HINT_T1 #define PETSC_PREFETCH_HINT_T1 2 #endif #ifndef PETSC_USE_SOCKET_VIEWER #define PETSC_USE_SOCKET_VIEWER 1 #endif #ifndef PETSC_DIR #define PETSC_DIR "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3" #endif #ifndef PETSC_HAVE_SSL #define PETSC_HAVE_SSL 1 #endif #ifndef PETSC_HAVE_HYPRE #define PETSC_HAVE_HYPRE 1 #endif #ifndef PETSC_LIB_DIR #define PETSC_LIB_DIR "/home/hp150306/t00196/lib/petsc-3.6.3_patch_debug/lib" #endif #ifndef PETSC_HAVE_FORTRAN #define PETSC_HAVE_FORTRAN 1 #endif #ifndef PETSC_USE_ISATTY #define PETSC_USE_ISATTY 1 #endif #ifndef PETSC_SLSUFFIX #define PETSC_SLSUFFIX "" #endif #ifndef PETSC_FUNCTION_NAME_CXX #define PETSC_FUNCTION_NAME_CXX __func__ #endif #ifndef PETSC_HAVE_FLUSH #define PETSC_HAVE_FLUSH 1 #endif #ifndef PETSC_HAVE_ATOLL #define PETSC_HAVE_ATOLL 1 #endif #ifndef PETSC_HAVE_DOUBLE_ALIGN_MALLOC #define PETSC_HAVE_DOUBLE_ALIGN_MALLOC 1 #endif #ifndef PETSC_UNUSED #define PETSC_UNUSED __attribute((unused)) #endif #ifndef PETSC_FUNCTION_NAME_C #define PETSC_FUNCTION_NAME_C __func__ #endif #ifndef PETSC_USE_SINGLE_LIBRARY #define PETSC_USE_SINGLE_LIBRARY 1 #endif #ifndef PETSC_HAVE_BUILTIN_EXPECT #define PETSC_HAVE_BUILTIN_EXPECT 1 #endif #ifndef PETSC_DIR_SEPARATOR #define PETSC_DIR_SEPARATOR '/' #endif #ifndef PETSC_PATH_SEPARATOR #define PETSC_PATH_SEPARATOR ':' #endif #ifndef PETSC_PREFETCH_HINT_NTA #define PETSC_PREFETCH_HINT_NTA 0 #endif #ifndef PETSC_Prefetch #define PETSC_Prefetch(a,b,c) __builtin_prefetch((a),(b),(c)) #endif #ifndef PETSC_HAVE_BLASLAPACK #define PETSC_HAVE_BLASLAPACK 1 #endif #ifndef PETSC_HAVE_GZIP #define PETSC_HAVE_GZIP 1 #endif #ifndef PETSC_HAVE_STRING_H #define PETSC_HAVE_STRING_H 1 #endif #ifndef PETSC_HAVE_SYS_TYPES_H #define PETSC_HAVE_SYS_TYPES_H 1 #endif #ifndef PETSC_HAVE_ENDIAN_H #define PETSC_HAVE_ENDIAN_H 1 #endif #ifndef PETSC_HAVE_SYS_PROCFS_H #define PETSC_HAVE_SYS_PROCFS_H 1 #endif #ifndef PETSC_HAVE_DLFCN_H #define PETSC_HAVE_DLFCN_H 1 #endif #ifndef PETSC_HAVE_SCHED_H #define PETSC_HAVE_SCHED_H 1 #endif #ifndef PETSC_HAVE_STDINT_H #define PETSC_HAVE_STDINT_H 1 #endif #ifndef PETSC_HAVE_LINUX_KERNEL_H #define PETSC_HAVE_LINUX_KERNEL_H 1 #endif #ifndef PETSC_HAVE_TIME_H #define PETSC_HAVE_TIME_H 1 #endif #ifndef PETSC_HAVE_MATH_H #define PETSC_HAVE_MATH_H 1 #endif #ifndef PETSC_TIME_WITH_SYS_TIME #define PETSC_TIME_WITH_SYS_TIME 1 #endif #ifndef PETSC_HAVE_SYS_PARAM_H #define PETSC_HAVE_SYS_PARAM_H 1 #endif #ifndef PETSC_HAVE_PTHREAD_H #define PETSC_HAVE_PTHREAD_H 1 #endif #ifndef PETSC_HAVE_UNISTD_H #define PETSC_HAVE_UNISTD_H 1 #endif #ifndef PETSC_HAVE_STDLIB_H #define PETSC_HAVE_STDLIB_H 1 #endif #ifndef PETSC_HAVE_SYS_WAIT_H #define PETSC_HAVE_SYS_WAIT_H 1 #endif #ifndef PETSC_HAVE_SETJMP_H #define PETSC_HAVE_SETJMP_H 1 #endif #ifndef PETSC_HAVE_LIMITS_H #define PETSC_HAVE_LIMITS_H 1 #endif #ifndef PETSC_HAVE_SYS_UTSNAME_H #define PETSC_HAVE_SYS_UTSNAME_H 1 #endif #ifndef PETSC_HAVE_NETINET_IN_H #define PETSC_HAVE_NETINET_IN_H 1 #endif #ifndef PETSC_HAVE_SYS_SOCKET_H #define PETSC_HAVE_SYS_SOCKET_H 1 #endif #ifndef PETSC_HAVE_FLOAT_H #define PETSC_HAVE_FLOAT_H 1 #endif #ifndef PETSC_HAVE_SEARCH_H #define PETSC_HAVE_SEARCH_H 1 #endif #ifndef PETSC_HAVE_SYS_RESOURCE_H #define PETSC_HAVE_SYS_RESOURCE_H 1 #endif #ifndef PETSC_HAVE_SYS_TIMES_H #define PETSC_HAVE_SYS_TIMES_H 1 #endif #ifndef PETSC_HAVE_NETDB_H #define PETSC_HAVE_NETDB_H 1 #endif #ifndef PETSC_HAVE_MALLOC_H #define PETSC_HAVE_MALLOC_H 1 #endif #ifndef PETSC_HAVE_PWD_H #define PETSC_HAVE_PWD_H 1 #endif #ifndef PETSC_HAVE_FCNTL_H #define PETSC_HAVE_FCNTL_H 1 #endif #ifndef PETSC_HAVE_STRINGS_H #define PETSC_HAVE_STRINGS_H 1 #endif #ifndef PETSC_HAVE_SYS_SYSINFO_H #define PETSC_HAVE_SYS_SYSINFO_H 1 #endif #ifndef PETSC_HAVE_SYS_TIME_H #define PETSC_HAVE_SYS_TIME_H 1 #endif #ifndef PETSC_USING_F90 #define PETSC_USING_F90 1 #endif #ifndef PETSC_USING_F2003 #define PETSC_USING_F2003 1 #endif #ifndef PETSC_HAVE_RTLD_NOW #define PETSC_HAVE_RTLD_NOW 1 #endif #ifndef PETSC_HAVE_RTLD_LOCAL #define PETSC_HAVE_RTLD_LOCAL 1 #endif #ifndef PETSC_HAVE_RTLD_LAZY #define PETSC_HAVE_RTLD_LAZY 1 #endif #ifndef PETSC_C_STATIC_INLINE #define PETSC_C_STATIC_INLINE static inline #endif #ifndef PETSC_HAVE_FORTRAN_UNDERSCORE #define PETSC_HAVE_FORTRAN_UNDERSCORE 1 #endif #ifndef PETSC_HAVE_CXX_NAMESPACE #define PETSC_HAVE_CXX_NAMESPACE 1 #endif #ifndef PETSC_HAVE_RTLD_GLOBAL #define PETSC_HAVE_RTLD_GLOBAL 1 #endif #ifndef PETSC_C_RESTRICT #define PETSC_C_RESTRICT __restrict__ #endif #ifndef PETSC_CXX_RESTRICT #define PETSC_CXX_RESTRICT __restrict__ #endif #ifndef PETSC_CXX_STATIC_INLINE #define PETSC_CXX_STATIC_INLINE static inline #endif #ifndef PETSC_HAVE_F90_2PTR_ARG #define PETSC_HAVE_F90_2PTR_ARG 1 #endif #ifndef PETSC_HAVE_LIBZ #define PETSC_HAVE_LIBZ 1 #endif #ifndef PETSC_HAVE_LIBDL #define PETSC_HAVE_LIBDL 1 #endif #ifndef PETSC_HAVE_LIBSTDC__ #define PETSC_HAVE_LIBSTDC__ 1 #endif #ifndef PETSC_HAVE_LIBPTHREAD #define PETSC_HAVE_LIBPTHREAD 1 #endif #ifndef PETSC_HAVE_LIBCRYPTO #define PETSC_HAVE_LIBCRYPTO 1 #endif #ifndef PETSC_HAVE_FENV_H #define PETSC_HAVE_FENV_H 1 #endif #ifndef PETSC_HAVE_LIBHYPRE #define PETSC_HAVE_LIBHYPRE 1 #endif #ifndef PETSC_HAVE_LOG2 #define PETSC_HAVE_LOG2 1 #endif #ifndef PETSC_HAVE_LIBSTD_MT #define PETSC_HAVE_LIBSTD_MT 1 #endif #ifndef PETSC_HAVE_LIBMPI_CXX #define PETSC_HAVE_LIBMPI_CXX 1 #endif #ifndef PETSC_HAVE_ERF #define PETSC_HAVE_ERF 1 #endif #ifndef PETSC_HAVE_LIBSSL #define PETSC_HAVE_LIBSSL 1 #endif #ifndef PETSC_HAVE_LIBTRTMETCPP #define PETSC_HAVE_LIBTRTMETCPP 1 #endif #ifndef PETSC_HAVE_TGAMMA #define PETSC_HAVE_TGAMMA 1 #endif #ifndef PETSC_HAVE_LIBFJDEMGL #define PETSC_HAVE_LIBFJDEMGL 1 #endif #ifndef PETSC_ARCH #define PETSC_ARCH "petsc-3.6.3_patch_debug" #endif #ifndef PETSC_CLANGUAGE_C #define PETSC_CLANGUAGE_C 1 #endif #ifndef PETSC_USE_ERRORCHECKING #define PETSC_USE_ERRORCHECKING 1 #endif #ifndef PETSC_WORDS_BIGENDIAN #define PETSC_WORDS_BIGENDIAN 1 #endif #ifndef PETSC_BITS_PER_BYTE #define PETSC_BITS_PER_BYTE 8 #endif #ifndef PETSC_SIZEOF_MPI_FINT #define PETSC_SIZEOF_MPI_FINT 4 #endif #ifndef PETSC_SIZEOF_VOID_P #define PETSC_SIZEOF_VOID_P 8 #endif #ifndef PETSC_RETSIGTYPE #define PETSC_RETSIGTYPE void #endif #ifndef PETSC_HAVE_CXX_COMPLEX #define PETSC_HAVE_CXX_COMPLEX 1 #endif #ifndef PETSC_SIZEOF_LONG #define PETSC_SIZEOF_LONG 8 #endif #ifndef PETSC_USE_FORTRANKIND #define PETSC_USE_FORTRANKIND 1 #endif #ifndef PETSC_SIZEOF_SIZE_T #define PETSC_SIZEOF_SIZE_T 8 #endif #ifndef PETSC_HAVE_SIGINFO_T #define PETSC_HAVE_SIGINFO_T 1 #endif #ifndef PETSC_SIZEOF_CHAR #define PETSC_SIZEOF_CHAR 1 #endif #ifndef PETSC_SIZEOF_DOUBLE #define PETSC_SIZEOF_DOUBLE 8 #endif #ifndef PETSC_SIZEOF_FLOAT #define PETSC_SIZEOF_FLOAT 4 #endif #ifndef PETSC_HAVE_C99_COMPLEX #define PETSC_HAVE_C99_COMPLEX 1 #endif #ifndef PETSC_SIZEOF_INT #define PETSC_SIZEOF_INT 4 #endif #ifndef PETSC_SIZEOF_LONG_LONG #define PETSC_SIZEOF_LONG_LONG 8 #endif #ifndef PETSC_SIZEOF_MPI_COMM #define PETSC_SIZEOF_MPI_COMM 8 #endif #ifndef PETSC_SIZEOF_SHORT #define PETSC_SIZEOF_SHORT 2 #endif #ifndef PETSC_HAVE_STRCASECMP #define PETSC_HAVE_STRCASECMP 1 #endif #ifndef PETSC_HAVE_GET_NPROCS #define PETSC_HAVE_GET_NPROCS 1 #endif #ifndef PETSC_HAVE_POPEN #define PETSC_HAVE_POPEN 1 #endif #ifndef PETSC_HAVE_SIGSET #define PETSC_HAVE_SIGSET 1 #endif #ifndef PETSC_HAVE_GETWD #define PETSC_HAVE_GETWD 1 #endif #ifndef PETSC_HAVE_VSNPRINTF #define PETSC_HAVE_VSNPRINTF 1 #endif #ifndef PETSC_HAVE_TIMES #define PETSC_HAVE_TIMES 1 #endif #ifndef PETSC_HAVE_DLSYM #define PETSC_HAVE_DLSYM 1 #endif #ifndef PETSC_HAVE_SNPRINTF #define PETSC_HAVE_SNPRINTF 1 #endif #ifndef PETSC_HAVE_GETHOSTBYNAME #define PETSC_HAVE_GETHOSTBYNAME 1 #endif #ifndef PETSC_HAVE_GETCWD #define PETSC_HAVE_GETCWD 1 #endif #ifndef PETSC_HAVE_DLERROR #define PETSC_HAVE_DLERROR 1 #endif #ifndef PETSC_HAVE_FORK #define PETSC_HAVE_FORK 1 #endif #ifndef PETSC_HAVE_RAND #define PETSC_HAVE_RAND 1 #endif #ifndef PETSC_HAVE_GETTIMEOFDAY #define PETSC_HAVE_GETTIMEOFDAY 1 #endif #ifndef PETSC_HAVE_DLCLOSE #define PETSC_HAVE_DLCLOSE 1 #endif #ifndef PETSC_HAVE_UNAME #define PETSC_HAVE_UNAME 1 #endif #ifndef PETSC_HAVE_GETHOSTNAME #define PETSC_HAVE_GETHOSTNAME 1 #endif #ifndef PETSC_HAVE_MKSTEMP #define PETSC_HAVE_MKSTEMP 1 #endif #ifndef PETSC_HAVE_SIGACTION #define PETSC_HAVE_SIGACTION 1 #endif #ifndef PETSC_HAVE_DRAND48 #define PETSC_HAVE_DRAND48 1 #endif #ifndef PETSC_HAVE_MEMALIGN #define PETSC_HAVE_MEMALIGN 1 #endif #ifndef PETSC_HAVE_VA_COPY #define PETSC_HAVE_VA_COPY 1 #endif #ifndef PETSC_HAVE_CLOCK #define PETSC_HAVE_CLOCK 1 #endif #ifndef PETSC_HAVE_ACCESS #define PETSC_HAVE_ACCESS 1 #endif #ifndef PETSC_HAVE_SIGNAL #define PETSC_HAVE_SIGNAL 1 #endif #ifndef PETSC_HAVE_USLEEP #define PETSC_HAVE_USLEEP 1 #endif #ifndef PETSC_HAVE_GETRUSAGE #define PETSC_HAVE_GETRUSAGE 1 #endif #ifndef PETSC_HAVE_VFPRINTF #define PETSC_HAVE_VFPRINTF 1 #endif #ifndef PETSC_HAVE_NANOSLEEP #define PETSC_HAVE_NANOSLEEP 1 #endif #ifndef PETSC_HAVE_GETDOMAINNAME #define PETSC_HAVE_GETDOMAINNAME 1 #endif #ifndef PETSC_HAVE_TIME #define PETSC_HAVE_TIME 1 #endif #ifndef PETSC_HAVE_LSEEK #define PETSC_HAVE_LSEEK 1 #endif #ifndef PETSC_HAVE_SOCKET #define PETSC_HAVE_SOCKET 1 #endif #ifndef PETSC_HAVE_SYSINFO #define PETSC_HAVE_SYSINFO 1 #endif #ifndef PETSC_HAVE_READLINK #define PETSC_HAVE_READLINK 1 #endif #ifndef PETSC_HAVE_REALPATH #define PETSC_HAVE_REALPATH 1 #endif #ifndef PETSC_HAVE_DLOPEN #define PETSC_HAVE_DLOPEN 1 #endif #ifndef PETSC_HAVE_MEMMOVE #define PETSC_HAVE_MEMMOVE 1 #endif #ifndef PETSC_SIGNAL_CAST #define PETSC_SIGNAL_CAST #endif #ifndef PETSC_HAVE_SLEEP #define PETSC_HAVE_SLEEP 1 #endif #ifndef PETSC_HAVE_VPRINTF #define PETSC_HAVE_VPRINTF 1 #endif #ifndef PETSC_HAVE_BZERO #define PETSC_HAVE_BZERO 1 #endif #ifndef PETSC_HAVE_GETPAGESIZE #define PETSC_HAVE_GETPAGESIZE 1 #endif #ifndef PETSC_CPU_RELAX #define PETSC_CPU_RELAX() __asm__ __volatile__ ("":::"memory") #endif #ifndef PETSC_BLASLAPACK_UNDERSCORE #define PETSC_BLASLAPACK_UNDERSCORE 1 #endif #ifndef PETSC_HAVE_MPI_F90MODULE #define PETSC_HAVE_MPI_F90MODULE 1 #endif #ifndef PETSC_HAVE_MPI_IALLREDUCE #define PETSC_HAVE_MPI_IALLREDUCE 1 #endif #ifndef PETSC_HAVE_OMPI_MINOR_VERSION #define PETSC_HAVE_OMPI_MINOR_VERSION 6 #endif #ifndef PETSC_HAVE_MPI_IN_PLACE #define PETSC_HAVE_MPI_IN_PLACE 1 #endif #ifndef PETSC_HAVE_MPI_COMM_C2F #define PETSC_HAVE_MPI_COMM_C2F 1 #endif #ifndef PETSC_HAVE_MPI_COMBINER_CONTIGUOUS #define PETSC_HAVE_MPI_COMBINER_CONTIGUOUS 1 #endif #ifndef PETSC_HAVE_MPI_TYPE_GET_EXTENT #define PETSC_HAVE_MPI_TYPE_GET_EXTENT 1 #endif #ifndef PETSC_HAVE_MPI_WIN_CREATE #define PETSC_HAVE_MPI_WIN_CREATE 1 #endif #ifndef PETSC_HAVE_MPI_TYPE_DUP #define PETSC_HAVE_MPI_TYPE_DUP 1 #endif #ifndef PETSC_HAVE_MPI_INIT_THREAD #define PETSC_HAVE_MPI_INIT_THREAD 1 #endif #ifndef PETSC_HAVE_MPI_COMM_F2C #define PETSC_HAVE_MPI_COMM_F2C 1 #endif #ifndef PETSC_HAVE_MPI_TYPE_GET_ENVELOPE #define PETSC_HAVE_MPI_TYPE_GET_ENVELOPE 1 #endif #ifndef PETSC_HAVE_MPI_ALLTOALLW #define PETSC_HAVE_MPI_ALLTOALLW 1 #endif #ifndef PETSC_HAVE_OMPI_MAJOR_VERSION #define PETSC_HAVE_OMPI_MAJOR_VERSION 1 #endif #ifndef PETSC_HAVE_MPIIO #define PETSC_HAVE_MPIIO 1 #endif #ifndef PETSC_HAVE_MPI_COMM_SPAWN #define PETSC_HAVE_MPI_COMM_SPAWN 1 #endif #ifndef PETSC_HAVE_MPI_FINT #define PETSC_HAVE_MPI_FINT 1 #endif #ifndef PETSC_HAVE_MPI_IBARRIER #define PETSC_HAVE_MPI_IBARRIER 1 #endif #ifndef PETSC_HAVE_MPI_FINALIZED #define PETSC_HAVE_MPI_FINALIZED 1 #endif #ifndef PETSC_HAVE_OMPI_RELEASE_VERSION #define PETSC_HAVE_OMPI_RELEASE_VERSION 3 #endif #ifndef PETSC_HAVE_MPI_REPLACE #define PETSC_HAVE_MPI_REPLACE 1 #endif #ifndef PETSC_HAVE_MPI_EXSCAN #define PETSC_HAVE_MPI_EXSCAN 1 #endif #ifndef PETSC_HAVE_MPI_COMBINER_DUP #define PETSC_HAVE_MPI_COMBINER_DUP 1 #endif #ifndef PETSC_USE_INFO #define PETSC_USE_INFO 1 #endif #ifndef PETSC_Alignx #define PETSC_Alignx(a,b) #endif #ifndef PETSC_USE_BACKWARD_LOOP #define PETSC_USE_BACKWARD_LOOP 1 #endif #ifndef PETSC_USE_DEBUG #define PETSC_USE_DEBUG 1 #endif #ifndef PETSC_IS_COLOR_VALUE_TYPE_SIZE #define PETSC_IS_COLOR_VALUE_TYPE_SIZE PETSC_SIZEOF_SHORT #endif #ifndef PETSC_USE_LOG #define PETSC_USE_LOG 1 #endif #ifndef PETSC_IS_COLOR_VALUE_TYPE #define PETSC_IS_COLOR_VALUE_TYPE short #endif #ifndef PETSC_USE_CTABLE #define PETSC_USE_CTABLE 1 #endif #ifndef PETSC_MEMALIGN #define PETSC_MEMALIGN 16 #endif #ifndef PETSC_USE_FORTRAN_INTERFACES #define PETSC_USE_FORTRAN_INTERFACES 1 #endif #ifndef PETSC_USE_SCALAR_REAL #define PETSC_USE_SCALAR_REAL 1 #endif #ifndef PETSC_HAVE_ISINF #define PETSC_HAVE_ISINF 1 #endif #ifndef PETSC_HAVE_ISNAN #define PETSC_HAVE_ISNAN 1 #endif #ifndef PETSC_USE_REAL_DOUBLE #define PETSC_USE_REAL_DOUBLE 1 #endif #ifndef PETSC_HAVE_DYNAMIC_LIBRARIES #define PETSC_HAVE_DYNAMIC_LIBRARIES 1 #endif #ifndef PETSC_HAVE_SHARED_LIBRARIES #define PETSC_HAVE_SHARED_LIBRARIES 1 #endif #ifndef PETSC__GNU_SOURCE #define PETSC__GNU_SOURCE 1 #endif #ifndef PETSC__BSD_SOURCE #define PETSC__BSD_SOURCE 1 #endif #ifndef PETSC__DEFAULT_SOURCE #define PETSC__DEFAULT_SOURCE 1 #endif #ifndef PETSC_LEVEL1_DCACHE_LINESIZE #define PETSC_LEVEL1_DCACHE_LINESIZE 32 #endif #ifndef PETSC_LEVEL1_DCACHE_SIZE #define PETSC_LEVEL1_DCACHE_SIZE 32768 #endif #ifndef PETSC_HAVE_FORTRAN_GET_COMMAND_ARGUMENT #define PETSC_HAVE_FORTRAN_GET_COMMAND_ARGUMENT 1 #endif #ifndef PETSC_USE_PROC_FOR_SIZE #define PETSC_USE_PROC_FOR_SIZE 1 #endif #ifndef PETSC_HAVE_SCHED_CPU_SET_T #define PETSC_HAVE_SCHED_CPU_SET_T 1 #endif #ifndef PETSC_HAVE_PTHREAD_BARRIER_T #define PETSC_HAVE_PTHREAD_BARRIER_T 1 #endif #ifndef PETSC_HAVE_SYS_SYSCTL_H #define PETSC_HAVE_SYS_SYSCTL_H 1 #endif #endif **** petsc-3.6.3_patch_debug/include/petscfix.h **** #if !defined(INCLUDED_UNKNOWN) #define INCLUDED_UNKNOWN #if defined(__cplusplus) extern "C" { } #else #endif #endif Configure Actions These are the actions performed by configure on the filesystem ----------------------------------------------------------------- PETSc: Build : Set default architecture to petsc-3.6.3_patch_debug in lib/petsc/conf/petscvariables File creation : Created petsc-3.6.3_patch_debug/lib/petsc/conf/reconfigure-petsc-3.6.3_patch_debug.py for automatic reconfiguration Framework: File creation : Created makefile configure header petsc-3.6.3_patch_debug/lib/petsc/conf/petscvariables File creation : Created makefile configure header petsc-3.6.3_patch_debug/lib/petsc/conf/petscrules File creation : Created configure header petsc-3.6.3_patch_debug/include/petscconf.h File creation : Created C specific configure header petsc-3.6.3_patch_debug/include/petscfix.h Pushing language C Popping language C Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Compilers: C Compiler: mpifcc -Xg -O0 -Kopenmp C++ Compiler: mpiFCC -Xg -O0 -Kopenmp Fortran Compiler: mpifrt -X9 -O0 -Kopenmp Linkers: Static linker: /usr/bin/ar cr Dynamic linker: mpifcc -shared -Xg -O0 -Kopenmp make: BLAS/LAPACK: -SSL2 MPI: Includes: -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu pthread: hypre: Includes: -I/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include Library: -Wl,-rpath,/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -L/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -lHYPRE -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ openmp: scalapack: Library: -SCALAPACK Arch: ssl: Library: -lssl -lcrypto PETSc: PETSC_ARCH: petsc-3.6.3_patch_debug PETSC_DIR: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 Clanguage: C Integer size: 32 Memory alignment: 16 Scalar type: real Precision: double shared libraries: disabled xxx=========================================================================xxx Configure stage complete. Now build PETSc libraries with (gnumake build): make PETSC_DIR=/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 PETSC_ARCH=petsc-3.6.3_patch_debug all xxx=========================================================================xxx ================================================================================ Finishing Configure Run at Thu Jun 2 10:43:37 2016 ================================================================================ -------------- next part -------------- Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC ================================================================================ ================================================================================ Starting Configure Run at Thu May 26 15:51:50 2016 Configure Options: --configModules=PETSc.Configure --optionsModule=config.compilerOptions --with-cc=mpifcc --with-cxx=mpiFCC --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" --LD_SHARED= --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 --with-scalapack-lib=-SCALAPACK --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 --with-hypre=1 --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4 Working directory: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 Machine platform: ('Linux', 'o05-037', '2.6.25.8', '#1 SMP Wed Jan 6 11:32:25 JST 2016', 's64fx', 's64fx') Python version: 2.6.2 (r262:71600, Dec 20 2011, 15:18:11) [GCC 4.2.4] ================================================================================ Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC ================================================================================ TEST configureExternalPackagesDir from config.framework(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/framework.py:832) TESTING: configureExternalPackagesDir from config.framework(config/BuildSystem/config/framework.py:832) ================================================================================ TEST configureDebuggers from config.utilities.debuggers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/debuggers.py:22) TESTING: configureDebuggers from config.utilities.debuggers(config/BuildSystem/config/utilities/debuggers.py:22) Find a default debugger and determine its arguments Checking for program /opt/FJSVtclang/check/gdb...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/gdb...not found Checking for program /opt/kusu/bin/gdb...not found Checking for program /opt/kusu/sbin/gdb...not found Checking for program /usr/pgsql-9.0/bin/gdb...not found Checking for program /usr/local/bin/gdb...not found Checking for program /bin/gdb...not found Checking for program /usr/bin/gdb...not found Checking for program /home/hp150306/t00196/bin/gdb...not found Checking for program /home/hp150306/t00196/shortcut/gdb...not found Checking for program /opt/FJSVxosmmm/sbin/gdb...not found Checking for program /home/hp150306/t00196/gdb...not found Checking for program /opt/FJSVtclang/check/dbx...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/dbx...not found Checking for program /opt/kusu/bin/dbx...not found Checking for program /opt/kusu/sbin/dbx...not found Checking for program /usr/pgsql-9.0/bin/dbx...not found Checking for program /usr/local/bin/dbx...not found Checking for program /bin/dbx...not found Checking for program /usr/bin/dbx...not found Checking for program /home/hp150306/t00196/bin/dbx...not found Checking for program /home/hp150306/t00196/shortcut/dbx...not found Checking for program /opt/FJSVxosmmm/sbin/dbx...not found Checking for program /home/hp150306/t00196/dbx...not found Checking for program /opt/FJSVtclang/check/xdb...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/xdb...not found Checking for program /opt/kusu/bin/xdb...not found Checking for program /opt/kusu/sbin/xdb...not found Checking for program /usr/pgsql-9.0/bin/xdb...not found Checking for program /usr/local/bin/xdb...not found Checking for program /bin/xdb...not found Checking for program /usr/bin/xdb...not found Checking for program /home/hp150306/t00196/bin/xdb...not found Checking for program /home/hp150306/t00196/shortcut/xdb...not found Checking for program /opt/FJSVxosmmm/sbin/xdb...not found Checking for program /home/hp150306/t00196/xdb...not found Checking for program /opt/FJSVtclang/check/dsymutil...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/dsymutil...not found Checking for program /opt/kusu/bin/dsymutil...not found Checking for program /opt/kusu/sbin/dsymutil...not found Checking for program /usr/pgsql-9.0/bin/dsymutil...not found Checking for program /usr/local/bin/dsymutil...not found Checking for program /bin/dsymutil...not found Checking for program /usr/bin/dsymutil...not found Checking for program /home/hp150306/t00196/bin/dsymutil...not found Checking for program /home/hp150306/t00196/shortcut/dsymutil...not found Checking for program /opt/FJSVxosmmm/sbin/dsymutil...not found Checking for program /home/hp150306/t00196/dsymutil...not found Defined make macro "DSYMUTIL" to "true" ================================================================================ TEST configureGit from config.sourceControl(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/sourceControl.py:24) TESTING: configureGit from config.sourceControl(config/BuildSystem/config/sourceControl.py:24) Find the Git executable Checking for program /opt/FJSVtclang/check/git...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/git...not found Checking for program /opt/kusu/bin/git...not found Checking for program /opt/kusu/sbin/git...not found Checking for program /usr/pgsql-9.0/bin/git...not found Checking for program /usr/local/bin/git...not found Checking for program /bin/git...not found Checking for program /usr/bin/git...not found Checking for program /home/hp150306/t00196/bin/git...not found Checking for program /home/hp150306/t00196/shortcut/git...not found Checking for program /opt/FJSVxosmmm/sbin/git...not found Checking for program /home/hp150306/t00196/git...not found ================================================================================ TEST configureCLanguage from PETSc.options.languages(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/languages.py:27) TESTING: configureCLanguage from PETSc.options.languages(config/PETSc/options/languages.py:27) Choose whether to compile the PETSc library using a C or C++ compiler C language is C Defined "CLANGUAGE_C" to "1" ================================================================================ TEST configureDirectories from PETSc.options.petscdir(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/petscdir.py:23) TESTING: configureDirectories from PETSc.options.petscdir(config/PETSc/options/petscdir.py:23) Checks PETSC_DIR and sets if not set Version Information: #define PETSC_VERSION_RELEASE 1 #define PETSC_VERSION_MAJOR 3 #define PETSC_VERSION_MINOR 6 #define PETSC_VERSION_SUBMINOR 3 #define PETSC_VERSION_PATCH 0 #define PETSC_VERSION_DATE "Dec, 03, 2015" #define PETSC_VERSION_GIT "v3.6.2-37-g6fc57b5" #define PETSC_VERSION_DATE_GIT "2015-12-03 23:02:05 -0600" #define PETSC_VERSION_(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_LT(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_LE(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_GT(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_GE(MAJOR,MINOR,SUBMINOR) \ Defined make macro "DIR" to "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3" ================================================================================ TEST getDatafilespath from PETSc.options.dataFilesPath(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/dataFilesPath.py:29) TESTING: getDatafilespath from PETSc.options.dataFilesPath(config/PETSc/options/dataFilesPath.py:29) Checks what DATAFILESPATH should be ================================================================================ TEST configureInstallationMethod from PETSc.options.petscclone(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/petscclone.py:20) TESTING: configureInstallationMethod from PETSc.options.petscclone(config/PETSc/options/petscclone.py:20) This is a tarball installation ================================================================================ TEST configureArchitecture from PETSc.options.arch(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/arch.py:25) TESTING: configureArchitecture from PETSc.options.arch(config/PETSc/options/arch.py:25) Checks PETSC_ARCH and sets if not set Defined "ARCH" to ""petsc-3.6.3_debug"" ================================================================================ TEST setInstallDir from PETSc.options.installDir(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/installDir.py:35) TESTING: setInstallDir from PETSc.options.installDir(config/PETSc/options/installDir.py:35) setup installDir to either prefix or if that is not set to PETSC_DIR/PETSC_ARCH ================================================================================ TEST saveReconfigure from PETSc.options.installDir(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/installDir.py:74) TESTING: saveReconfigure from PETSc.options.installDir(config/PETSc/options/installDir.py:74) ================================================================================ TEST cleanInstallDir from PETSc.options.installDir(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/installDir.py:67) TESTING: cleanInstallDir from PETSc.options.installDir(config/PETSc/options/installDir.py:67) ================================================================================ TEST configureInstallDir from PETSc.options.installDir(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/installDir.py:51) TESTING: configureInstallDir from PETSc.options.installDir(config/PETSc/options/installDir.py:51) Makes installDir subdirectories if it does not exist for both prefix install location and PETSc work install location Changed persistence directory to /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-3.6.3_debug/lib/petsc/conf ================================================================================ TEST restoreReconfigure from PETSc.options.installDir(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/installDir.py:87) TESTING: restoreReconfigure from PETSc.options.installDir(config/PETSc/options/installDir.py:87) ================================================================================ TEST setExternalPackagesDir from PETSc.options.externalpackagesdir(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/externalpackagesdir.py:15) TESTING: setExternalPackagesDir from PETSc.options.externalpackagesdir(config/PETSc/options/externalpackagesdir.py:15) ================================================================================ TEST cleanExternalpackagesDir from PETSc.options.externalpackagesdir(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/externalpackagesdir.py:22) TESTING: cleanExternalpackagesDir from PETSc.options.externalpackagesdir(config/PETSc/options/externalpackagesdir.py:22) ================================================================================ TEST printEnvVariables from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1538) TESTING: printEnvVariables from config.setCompilers(config/BuildSystem/config/setCompilers.py:1538) **** printenv **** Timezone_ntp_server1=10.0.160.15 Timezone_ntp_server2=10.0.160.1 DEPOT_REPOS_ROOT=/depot/repos NII_PARENTIPS=10.231.4.65;10.0.4.95 PJM_O_WORKDIR=/volume2/home/hp150306/t00196/source/petsc-3.6.3 NII_PGID= DEPOT_AUTOINST_ROOT=/depot/repos/instconf InstallerServeNFS=1 CFMBaseDir=/opt/kusu/cfm OMPI_CKPTCONFIG=0x00 PJM_O_SHELL=/bin/bash MANPATH=:/opt/kusu/man Timezone_utc=0 Timezone_zone=Asia/Tokyo KUSU_TMP=/tmp root_password_auth=off PYTHONPATH=/opt/primitive/lib64/python2.6/site-packages:/opt/primitive/lib/python2.6/site-packages:/opt/primitive/lib64/python2.4/site-packages:/opt/primitive/lib/python2.4/site-packages:/opt/kusu/lib64/python:/opt/kusu/lib/python: KUSU_ROOT=/opt/kusu PublicDNSZone=k NII_PEERIP=0 DEPOT_DOCS_ROOT=/depot/www/kits NII_HAGROUP=, InstNum= TUNING_XINET_MAX_CLIENTS=100 PIXIE_ROOT=/tftpboot/kusu Keyboard=jp106 NII_PARENTIP=10.224.0.128 PJM_JOBID=5203527 LS_COLORS=no=00:fi=00:di=00;34:ln=00;36:pi=40;33:so=00;35:bd=40;33;01:cd=40;33;01:or=01;05;37;41:mi=01;05;37;41:ex=00;32:*.cmd=00;32:*.exe=00;32:*.com=00;32:*.btm=00;32:*.bat=00;32:*.sh=00;32:*.csh=00;32:*.tar=00;31:*.tgz=00;31:*.arj=00;31:*.taz=00;31:*.lzh=00;31:*.zip=00;31:*.z=00;31:*.Z=00;31:*.gz=00;31:*.bz2=00;31:*.bz=00;31:*.tz=00;31:*.rpm=00;31:*.cpio=00;31:*.jpg=00;35:*.gif=00;35:*.bmp=00;35:*.xbm=00;35:*.xpm=00;35:*.png=00;35:*.tif=00;35: Env_base=K-1.2.0-20-1 DB_POOLER_MAX_CLIENTS=32768 snmp_trap_receivers= NII_NGTYPE=compute-diskless PJM_DPREFIX=#PJM LMGRD_PATH= PJM_O_PATH=/usr/lib64/qt-3.3/bin:/opt/local/openssh/bin:/opt/FJSVtclang/check:/opt/FJSVtclang/GM-1.2.0-20/bin:/opt/FJSVtclang/1.2.0/util/bin:/usr/local/bin:/bin:/usr/bin:/usr/local/bin/SU/bin:/opt/local/gfarm/bin:/opt/local/Python-2.7.3/bin:/home/hp150306/t00196/bin:/home/hp150306/t00196/shortcut:/home/hp150306/t00196/bin:/home/hp150306/t00196/shortcut SYSLOG_SERVER=disabled passwordless_root_on_compute=on SHLVL=1 NII_NICDEF0=tofu0|10.231.4.97|255.224.0.0|10.224.0.0|-tofu0|10.255.255.254|0||02:00:10:08:02:c3|provision PETSC_ARCH=petsc-3.6.3_debug KUSU_LOGFILE=/var/log/kusu/kusu.log NII_NID=10970 CFM_SERVICE=multicast MODULESHOME=/usr/share/Modules KUSU_MAXLOGNUM=10 NII_INSTALLERS=10.224.0.128 PRIMITIVE_ROOT=/opt/primitive DEPOT_CONTRIB_ROOT=/depot/contrib MULTICAST_ADDR=239.0.0.98 NII_HOSTNAME=o05-037 PrimaryInstaller=cs01p03 MASTER_UUID=KUSU NII_BOOTNIC=tofu0 TMPDIR=./ MODULEPATH=/usr/share/Modules/modulefiles:/etc/modulefiles: NII_NFSROOTSERVER=10.224.0.128 NII_BOOTIP=10.231.4.97 dns1=127.0.0.1 InstallerServeDNS=1 FJPNCKPT_CONFIG=0x00 KUSUSNMPD_LOG_SIZE=5000 KUSU_MAXLOGSIZE=10485760 PROVISION=KUSU InstallerServeDHCP=1 ssh_port=22 TUNING_ENABLED=1 LM_LICENSE_FILE= PJM_JOBNAME=STDIN LD_LIBRARY_PATH=/opt/FJSVpxtof/sparc64fx/lib64:/opt/FJSVtclang/GM-1.2.0-20/lib64:/opt/FJSVpnavi/sparc64fx/lib64:/opt/FJSVXosSclib/lib64 Timezone_ntp_server=10.0.160.14 KUSU_DIST_ARCH=s64fx G_BROKEN_FILENAMES=1 _=./configure DEPOT_REPOS_SCRIPTS=/depot/repos/custom_scripts NII_REPO=/repos/1002 TOFU_HOME=/opt/FJSVpxtof/sparc64fx Language=en_US KusuAuthScheme=files PGBOUNCER_LOG_SIZE=100 KUSU_DHCP_TIMEOUT=120 InstallerServeNTP=1 NII_OSTYPE=xtcos-1.3-sparc64fx PJM_O_HOST=fe01p04 KUSU_DB_ENGINE=postgres NII_REPOID=1002 KUSU_LOGLEVEL=DEBUG NII_INSTALLTYPE=diskless NII_SNMPD=10.224.0.128 NII_NGID=18 KUSU_HEARTBEAT_INTERFACE=bond0 PJM_JOBDIR=/volume2/home/hp150306/t00196/source/petsc-3.6.3 DEPOT_REPOS_POST=/depot/repos/post_scripts DB_POOLER_POOL_SIZE=50000 ssh_old_port=22 NII_DBSERVERPORT=6432 DB_POOLER_PORT=6432 PJM_O_LOGNAME=t00196 PATH=/opt/FJSVtclang/check:/opt/FJSVtclang/GM-1.2.0-20/bin:/opt/kusu/bin:/opt/kusu/sbin:/usr/pgsql-9.0/bin:/usr/local/bin:/bin:/usr/bin:/home/hp150306/t00196/bin:/home/hp150306/t00196/shortcut:/opt/FJSVxosmmm/sbin PJM_ENVIRONMENT=INTERACT NII_DBSERVERIP=10.0.160.20 TERM=xterm KUSU_INSTALLER_GW=10.1.161.254 DNSZone=k PRESERVE_NODE_IP=1 PJM_O_HOME=/home/hp150306/t00196 CFM_PROTOCOL=broadcast NII_NFSROOTOPTS=rw,hard,intr,nolock,async,dev,exec,suid HOME=/home/hp150306/t00196 DEPOT_UPDATES_ROOT=/depot/updates NII_EXTRAID=k-comp_0x03100035 MPI_HOME=/opt/FJSVtclang/GM-1.2.0-20 InstallerServeNIS=0 TUNING_TFTP_MAX_CLIENTS=100 DEPOT_IMAGES_ROOT=/depot/images KUSU_EVENT_LOGFILE=/var/log/kusu/kusu-events.log DB_POOLER_ENABLED=1 TUNING_SSH_MAX_CLIENTS=200 NII_NFSROOTPATH=/export/nfsroot/o05-037 LOADEDMODULES= DEPOT_KITS_ROOT=/depot/kits PJM_O_MAIL=/var/spool/mail/t00196 KUSU_VERSION=2.1 PWD=/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 PJM_O_LANG=en_US.UTF-8 ================================================================================ TEST resetEnvCompilers from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1545) TESTING: resetEnvCompilers from config.setCompilers(config/BuildSystem/config/setCompilers.py:1545) ================================================================================ TEST checkEnvCompilers from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1575) TESTING: checkEnvCompilers from config.setCompilers(config/BuildSystem/config/setCompilers.py:1575) ================================================================================ TEST checkMPICompilerOverride from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1510) TESTING: checkMPICompilerOverride from config.setCompilers(config/BuildSystem/config/setCompilers.py:1510) Check if --with-mpi-dir is used along with CC CXX or FC compiler options. This usually prevents mpi compilers from being used - so issue a warning ================================================================================ TEST requireMpiLdPath from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1529) TESTING: requireMpiLdPath from config.setCompilers(config/BuildSystem/config/setCompilers.py:1529) OpenMPI wrappers require LD_LIBRARY_PATH set ================================================================================ TEST checkVendor from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:402) TESTING: checkVendor from config.setCompilers(config/BuildSystem/config/setCompilers.py:402) Determine the compiler vendor Compiler vendor is "" ================================================================================ TEST checkInitialFlags from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:412) TESTING: checkInitialFlags from config.setCompilers(config/BuildSystem/config/setCompilers.py:412) Initialize the compiler and linker flags Pushing language C Initialized CFLAGS to -Xg -O0 Initialized CFLAGS to -Xg -O0 Initialized LDFLAGS to Popping language C Pushing language CUDA Initialized CUDAFLAGS to Initialized CUDAFLAGS to Initialized LDFLAGS to Popping language CUDA Pushing language Cxx Initialized CXXFLAGS to -Xg -O0 Initialized CXX_CXXFLAGS to Initialized LDFLAGS to Popping language Cxx Pushing language FC Initialized FFLAGS to -X9 -O0 Initialized FFLAGS to -X9 -O0 Initialized LDFLAGS to Popping language FC Initialized CPPFLAGS to Initialized CUDAPPFLAGS to Initialized CXXCPPFLAGS to Initialized CC_LINKER_FLAGS to [] Initialized CXX_LINKER_FLAGS to [] Initialized FC_LINKER_FLAGS to [] Initialized CUDAC_LINKER_FLAGS to [] Initialized sharedLibraryFlags to [] Initialized dynamicLibraryFlags to [] ================================================================================ TEST checkCCompiler from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:538) TESTING: checkCCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:538) Locate a functional C compiler Checking for program /opt/FJSVtclang/check/mpifcc...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/mpifcc...found Defined make macro "CC" to "mpifcc" Pushing language C All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lpetsc-ufod4vtr9mqHvKIQiVAm Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest Popping language C ================================================================================ TEST checkCPreprocessor from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:571) TESTING: checkCPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:571) Locate a functional C preprocessor Checking for program /opt/FJSVtclang/check/mpifcc...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/mpifcc...found Defined make macro "CPP" to "mpifcc -E" Pushing language C Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c" #line 1 "/usr/include/stdlib.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/stdlib.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef int wchar_t; #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 34 "/usr/include/stdlib.h" #line 95 "/usr/include/stdlib.h" typedef struct { int quot; int rem; } div_t; typedef struct { long int quot; long int rem; } ldiv_t; typedef struct { long long int quot; long long int rem; } lldiv_t; extern size_t __ctype_get_mb_cur_max (void) ; extern double atof (const char *__nptr) ; extern int atoi (const char *__nptr) ; extern long int atol (const char *__nptr) ; extern long long int atoll (const char *__nptr) ; extern double strtod (const char * __nptr, char ** __endptr) ; extern float strtof (const char * __nptr, char ** __endptr) ; extern long double strtold (const char * __nptr, char ** __endptr) ; extern long int strtol (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long int strtoul (const char * __nptr, char ** __endptr, int __base) ; extern long long int strtoq (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long long int strtouq (const char * __nptr, char ** __endptr, int __base) ; extern long long int strtoll (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long long int strtoull (const char * __nptr, char ** __endptr, int __base) ; #line 274 "/usr/include/stdlib.h" #line 305 "/usr/include/stdlib.h" extern char *l64a (long int __n) ; extern long int a64l (const char *__s) ; #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; typedef char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 321 "/usr/include/stdlib.h" extern long int random (void) ; extern void srandom (unsigned int __seed) ; extern char *initstate (unsigned int __seed, char *__statebuf, size_t __statelen) ; extern char *setstate (char *__statebuf) ; struct random_data { int32_t *fptr; int32_t *rptr; int32_t *state; int rand_type; int rand_deg; int rand_sep; int32_t *end_ptr; }; extern int random_r (struct random_data * __buf, int32_t * __result) ; extern int srandom_r (unsigned int __seed, struct random_data *__buf) ; extern int initstate_r (unsigned int __seed, char * __statebuf, size_t __statelen, struct random_data * __buf) ; extern int setstate_r (char * __statebuf, struct random_data * __buf) ; extern int rand (void) ; extern void srand (unsigned int __seed) ; extern int rand_r (unsigned int *__seed) ; extern double drand48 (void) ; extern double erand48 (unsigned short int __xsubi[3]) ; extern long int lrand48 (void) ; extern long int nrand48 (unsigned short int __xsubi[3]) ; extern long int mrand48 (void) ; extern long int jrand48 (unsigned short int __xsubi[3]) ; extern void srand48 (long int __seedval) ; extern unsigned short int *seed48 (unsigned short int __seed16v[3]) ; extern void lcong48 (unsigned short int __param[7]) ; struct drand48_data { unsigned short int __x[3]; unsigned short int __old_x[3]; unsigned short int __c; unsigned short int __init; unsigned long long int __a; }; extern int drand48_r (struct drand48_data * __buffer, double * __result) ; extern int erand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, double * __result) ; extern int lrand48_r (struct drand48_data * __buffer, long int * __result) ; extern int nrand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, long int * __result) ; extern int mrand48_r (struct drand48_data * __buffer, long int * __result) ; extern int jrand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, long int * __result) ; extern int srand48_r (long int __seedval, struct drand48_data *__buffer) ; extern int seed48_r (unsigned short int __seed16v[3], struct drand48_data *__buffer) ; extern int lcong48_r (unsigned short int __param[7], struct drand48_data *__buffer) ; extern void *malloc (size_t __size) ; extern void *calloc (size_t __nmemb, size_t __size) ; extern void *realloc (void *__ptr, size_t __size) ; extern void free (void *__ptr) ; extern void cfree (void *__ptr) ; #line 1 "/usr/include/alloca.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/alloca.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 26 "/usr/include/alloca.h" extern void *alloca (size_t __size) ; #line 498 "/usr/include/stdlib.h" extern void *valloc (size_t __size) ; extern int posix_memalign (void **__memptr, size_t __alignment, size_t __size) ; extern void abort (void) ; extern int atexit (void (*__func) (void)) ; extern int on_exit (void (*__func) (int __status, void *__arg), void *__arg) ; extern void exit (int __status) ; extern void _Exit (int __status) ; extern char *getenv (const char *__name) ; extern char *__secure_getenv (const char *__name) ; extern int putenv (char *__string) ; extern int setenv (const char *__name, const char *__value, int __replace) ; extern int unsetenv (const char *__name) ; extern int clearenv (void) ; extern char *mktemp (char *__template) ; extern int mkstemp (char *__template) ; #line 607 "/usr/include/stdlib.h" extern char *mkdtemp (char *__template) ; #line 638 "/usr/include/stdlib.h" extern int system (const char *__command) ; #line 655 "/usr/include/stdlib.h" extern char *realpath (const char * __name, char * __resolved) ; typedef int (*__compar_fn_t) (const void *, const void *); extern void *bsearch (const void *__key, const void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; extern void qsort (void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; extern int abs (int __x) ; extern long int labs (long int __x) ; extern long long int llabs (long long int __x) ; extern div_t div (int __numer, int __denom) ; extern ldiv_t ldiv (long int __numer, long int __denom) ; extern lldiv_t lldiv (long long int __numer, long long int __denom) ; extern char *ecvt (double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *fcvt (double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *gcvt (double __value, int __ndigit, char *__buf) ; extern char *qecvt (long double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *qfcvt (long double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *qgcvt (long double __value, int __ndigit, char *__buf) ; extern int ecvt_r (double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int fcvt_r (double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int qecvt_r (long double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int qfcvt_r (long double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int mblen (const char *__s, size_t __n) ; extern int mbtowc (wchar_t * __pwc, const char * __s, size_t __n) ; extern int wctomb (char *__s, wchar_t __wchar) ; extern size_t mbstowcs (wchar_t * __pwcs, const char * __s, size_t __n) ; extern size_t wcstombs (char * __s, const wchar_t * __pwcs, size_t __n) ; extern int rpmatch (const char *__response) ; #line 820 "/usr/include/stdlib.h" extern int posix_openpt (int __oflag) ; #line 851 "/usr/include/stdlib.h" #line 862 "/usr/include/stdlib.h" extern int getloadavg (double __loadavg[], int __nelem) ; #line 879 "/usr/include/stdlib.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Popping language C ================================================================================ TEST checkCUDACompiler from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:612) TESTING: checkCUDACompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:612) Locate a functional CUDA compiler ================================================================================ TEST checkCUDAPreprocessor from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:652) TESTING: checkCUDAPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:652) Locate a functional CUDA preprocessor ================================================================================ TEST checkCxxCompiler from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:764) TESTING: checkCxxCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:764) Locate a functional Cxx compiler Checking for program /opt/FJSVtclang/check/mpiFCC...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/mpiFCC...found Defined make macro "CXX" to "mpiFCC" Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lpetsc-ufod4vtr9mqHvKIQiVAm Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest Popping language Cxx ================================================================================ TEST checkCxxPreprocessor from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:802) TESTING: checkCxxPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:802) Locate a functional Cxx preprocessor Checking for program /opt/FJSVtclang/check/mpiFCC...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/mpiFCC...found Defined make macro "CXXCPP" to "mpiFCC -E" Pushing language Cxx Executing: mpiFCC -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/FCC.pre" #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conffix.h" extern "C" { } #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/cstdlib" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_prolog.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 33 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 161 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 354 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 59 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_stlport_version.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl_user_config.h" #line 74 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 90 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config_compat.h" #line 28 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config_compat.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config_compat.h" #line 49 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config_compat.h" #line 95 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_site_config.h" #line 30 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_site_config.h" #line 99 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/config/stlcomp.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/config/stl_fujitsu.h" #line 18 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/config/stl_fujitsu.h" #line 28 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/config/stl_fujitsu.h" #line 53 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/config/stlcomp.h" #line 128 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/config/stlcomp.h" #line 102 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/config/stl_confix.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/config/stl_confix.h" #line 111 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 121 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 185 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 196 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 262 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 276 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 297 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 305 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 313 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 321 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 338 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 351 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 372 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 417 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 468 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 496 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 507 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 517 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 542 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 556 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 565 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" namespace std { } namespace __std_alias = std; #line 623 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 643 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 688 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" namespace stlp_priv { using namespace std; } #line 713 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" namespace stlport = std; namespace _STL = std; #line 758 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 784 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 817 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 857 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 871 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 890 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 921 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 936 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 957 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 994 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1022 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1035 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1060 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1091 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1104 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1114 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1148 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1197 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1219 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1237 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 19 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_prolog.h" #line 25 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/cstdlib" #line 1 "/usr/include/stdlib.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/stdlib.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 25 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 35 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 38 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 52 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 34 "/usr/include/stdlib.h" extern "C" { #line 1 "/usr/include/bits/waitflags.h" #line 43 "/usr/include/stdlib.h" #line 1 "/usr/include/bits/waitstatus.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 66 "/usr/include/bits/waitstatus.h" union wait { int w_status; struct { #line 79 "/usr/include/bits/waitstatus.h" unsigned int:16; unsigned int __w_retcode:8; unsigned int __w_coredump:1; unsigned int __w_termsig:7; } __wait_terminated; struct { #line 93 "/usr/include/bits/waitstatus.h" unsigned int:16; unsigned int __w_stopsig:8; unsigned int __w_stopval:8; } __wait_stopped; }; #line 44 "/usr/include/stdlib.h" #line 57 "/usr/include/stdlib.h" #line 75 "/usr/include/stdlib.h" #line 83 "/usr/include/stdlib.h" #line 95 "/usr/include/stdlib.h" typedef struct { int quot; int rem; } div_t; typedef struct { long int quot; long int rem; } ldiv_t; typedef struct { long long int quot; long long int rem; } lldiv_t; extern size_t __ctype_get_mb_cur_max (void) ; extern double atof (const char *__nptr) ; extern int atoi (const char *__nptr) ; extern long int atol (const char *__nptr) ; extern long long int atoll (const char *__nptr) ; extern double strtod (const char * __nptr, char ** __endptr) ; extern float strtof (const char * __nptr, char ** __endptr) ; extern long double strtold (const char * __nptr, char ** __endptr) ; extern long int strtol (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long int strtoul (const char * __nptr, char ** __endptr, int __base) ; extern long long int strtoq (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long long int strtouq (const char * __nptr, char ** __endptr, int __base) ; extern long long int strtoll (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long long int strtoull (const char * __nptr, char ** __endptr, int __base) ; #line 274 "/usr/include/stdlib.h" #line 305 "/usr/include/stdlib.h" extern char *l64a (long int __n) ; extern long int a64l (const char *__s) ; #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" extern "C" { #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 57 "/usr/include/sys/types.h" typedef __ino64_t ino64_t; typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 95 "/usr/include/sys/types.h" typedef __off64_t off64_t; typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/time.h" #line 22 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/time.h" #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" typedef __clock_t clock_t; typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 30 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/time.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/time.h" #line 134 "/usr/include/sys/types.h" typedef __useconds_t useconds_t; typedef __suseconds_t suseconds_t; #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 25 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 35 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 38 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 52 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; typedef char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/time.h" #line 22 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/time.h" #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 30 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/time.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef long int __fd_mask; typedef struct { __fd_mask fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern "C" { extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); } #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blksize_t blksize_t; typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" typedef __blkcnt64_t blkcnt64_t; typedef __fsblkcnt64_t fsblkcnt64_t; typedef __fsfilcnt64_t fsfilcnt64_t; #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" } #line 321 "/usr/include/stdlib.h" extern long int random (void) ; extern void srandom (unsigned int __seed) ; extern char *initstate (unsigned int __seed, char *__statebuf, size_t __statelen) ; extern char *setstate (char *__statebuf) ; struct random_data { int32_t *fptr; int32_t *rptr; int32_t *state; int rand_type; int rand_deg; int rand_sep; int32_t *end_ptr; }; extern int random_r (struct random_data * __buf, int32_t * __result) ; extern int srandom_r (unsigned int __seed, struct random_data *__buf) ; extern int initstate_r (unsigned int __seed, char * __statebuf, size_t __statelen, struct random_data * __buf) ; extern int setstate_r (char * __statebuf, struct random_data * __buf) ; extern int rand (void) ; extern void srand (unsigned int __seed) ; extern int rand_r (unsigned int *__seed) ; extern double drand48 (void) ; extern double erand48 (unsigned short int __xsubi[3]) ; extern long int lrand48 (void) ; extern long int nrand48 (unsigned short int __xsubi[3]) ; extern long int mrand48 (void) ; extern long int jrand48 (unsigned short int __xsubi[3]) ; extern void srand48 (long int __seedval) ; extern unsigned short int *seed48 (unsigned short int __seed16v[3]) ; extern void lcong48 (unsigned short int __param[7]) ; struct drand48_data { unsigned short int __x[3]; unsigned short int __old_x[3]; unsigned short int __c; unsigned short int __init; unsigned long long int __a; }; extern int drand48_r (struct drand48_data * __buffer, double * __result) ; extern int erand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, double * __result) ; extern int lrand48_r (struct drand48_data * __buffer, long int * __result) ; extern int nrand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, long int * __result) ; extern int mrand48_r (struct drand48_data * __buffer, long int * __result) ; extern int jrand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, long int * __result) ; extern int srand48_r (long int __seedval, struct drand48_data *__buffer) ; extern int seed48_r (unsigned short int __seed16v[3], struct drand48_data *__buffer) ; extern int lcong48_r (unsigned short int __param[7], struct drand48_data *__buffer) ; extern void *malloc (size_t __size) ; extern void *calloc (size_t __nmemb, size_t __size) ; extern void *realloc (void *__ptr, size_t __size) ; extern void free (void *__ptr) ; extern void cfree (void *__ptr) ; #line 1 "/usr/include/alloca.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/alloca.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 25 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 35 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 38 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 52 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 26 "/usr/include/alloca.h" extern "C" { extern void *alloca (size_t __size) ; } #line 498 "/usr/include/stdlib.h" extern void *valloc (size_t __size) ; extern int posix_memalign (void **__memptr, size_t __alignment, size_t __size) ; extern void abort (void) ; extern int atexit (void (*__func) (void)) ; extern int on_exit (void (*__func) (int __status, void *__arg), void *__arg) ; extern void exit (int __status) ; extern void _Exit (int __status) ; extern char *getenv (const char *__name) ; extern char *__secure_getenv (const char *__name) ; extern int putenv (char *__string) ; extern int setenv (const char *__name, const char *__value, int __replace) ; extern int unsetenv (const char *__name) ; extern int clearenv (void) ; extern char *mktemp (char *__template) ; extern int mkstemp (char *__template) ; #line 604 "/usr/include/stdlib.h" extern int mkstemp64 (char *__template) ; extern char *mkdtemp (char *__template) ; #line 638 "/usr/include/stdlib.h" extern int system (const char *__command) ; #line 655 "/usr/include/stdlib.h" extern char *realpath (const char * __name, char * __resolved) ; typedef int (*__compar_fn_t) (const void *, const void *); extern void *bsearch (const void *__key, const void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; extern void qsort (void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; extern int abs (int __x) ; extern long int labs (long int __x) ; extern long long int llabs (long long int __x) ; extern div_t div (int __numer, int __denom) ; extern ldiv_t ldiv (long int __numer, long int __denom) ; extern lldiv_t lldiv (long long int __numer, long long int __denom) ; extern char *ecvt (double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *fcvt (double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *gcvt (double __value, int __ndigit, char *__buf) ; extern char *qecvt (long double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *qfcvt (long double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *qgcvt (long double __value, int __ndigit, char *__buf) ; extern int ecvt_r (double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int fcvt_r (double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int qecvt_r (long double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int qfcvt_r (long double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int mblen (const char *__s, size_t __n) ; extern int mbtowc (wchar_t * __pwc, const char * __s, size_t __n) ; extern int wctomb (char *__s, wchar_t __wchar) ; extern size_t mbstowcs (wchar_t * __pwcs, const char * __s, size_t __n) ; extern size_t wcstombs (char * __s, const wchar_t * __pwcs, size_t __n) ; extern int rpmatch (const char *__response) ; extern int getsubopt (char ** __optionp, char *const * __tokens, char ** __valuep) ; extern void setkey (const char *__key) ; extern int posix_openpt (int __oflag) ; extern int grantpt (int __fd) ; extern int unlockpt (int __fd) ; extern char *ptsname (int __fd) ; #line 862 "/usr/include/stdlib.h" extern int getloadavg (double __loadavg[], int __nelem) ; #line 879 "/usr/include/stdlib.h" } #line 31 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/cstdlib" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/cstdlib" namespace std { using ::div_t; using ::ldiv_t; using ::size_t; using ::abs; using ::div; using ::abort; using ::getenv; using ::mblen; using ::mbtowc; using ::system; using ::bsearch; using ::atexit; using ::exit; using ::calloc; using ::free; using ::malloc; using ::realloc; using ::atof; using ::atoi; using ::atol; using ::mbstowcs; using ::strtod; using ::strtol; using ::strtoul; using ::wcstombs; using ::wctomb; using ::qsort; using ::labs; using ::ldiv; using ::llabs; using ::lldiv_t; using ::lldiv; #line 103 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/cstdlib" using ::rand; using ::srand; } #line 116 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/cstdlib" namespace std { inline long abs(long __x) { return ::labs(__x); } inline ldiv_t div(long __x, long __y) { return ::ldiv(__x, __y); } } #line 166 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/cstdlib" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_epilog.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config_compat_post.h" #line 27 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config_compat_post.h" #line 53 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config_compat_post.h" #line 20 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_epilog.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_epilog.h" #line 170 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/cstdlib" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Popping language Cxx ================================================================================ TEST checkFortranCompiler from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:919) TESTING: checkFortranCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:919) Locate a functional Fortran compiler Checking for program /opt/FJSVtclang/check/mpifrt...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/mpifrt...found Defined make macro "FC" to "mpifrt" Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.F Successful compile: Source: program main end Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.F Successful compile: Source: program main end Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.F Successful compile: Source: program main end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lpetsc-ufod4vtr9mqHvKIQiVAm Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.F Successful compile: Source: program main end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest Popping language FC ================================================================================ TEST checkFortranComments from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:940) TESTING: checkFortranComments from config.setCompilers(config/BuildSystem/config/setCompilers.py:940) Make sure fortran comment "!" works Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.F Successful compile: Source: ! comment program main end Fortran comments can use ! in column 1 Popping language FC ================================================================================ TEST checkPIC from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1003) TESTING: checkPIC from config.setCompilers(config/BuildSystem/config/setCompilers.py:1003) Determine the PIC option for each compiler - There needs to be a test that checks that the functionality is actually working Skip checking PIC options on user request ================================================================================ TEST checkLargeFileIO from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1036) TESTING: checkLargeFileIO from config.setCompilers(config/BuildSystem/config/setCompilers.py:1036) ================================================================================ TEST checkArchiver from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1135) TESTING: checkArchiver from config.setCompilers(config/BuildSystem/config/setCompilers.py:1135) Check that the archiver exists and can make a library usable by the compiler Pushing language C Executing: ar -V stdout: GNU ar 2.17 Copyright 2005 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License. This program has absolutely no warranty. Executing: ar -V stdout: GNU ar 2.17 Copyright 2005 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License. This program has absolutely no warranty. Defined make macro "FAST_AR_FLAGS" to "Scq" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int foo(int a) { return a+1; } Checking for program /opt/FJSVtclang/check/ar...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/ar...not found Checking for program /opt/kusu/bin/ar...not found Checking for program /opt/kusu/sbin/ar...not found Checking for program /usr/pgsql-9.0/bin/ar...not found Checking for program /usr/local/bin/ar...not found Checking for program /bin/ar...not found Checking for program /usr/bin/ar...found Defined make macro "AR" to "/usr/bin/ar" Checking for program /opt/FJSVtclang/check/ranlib...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/ranlib...not found Checking for program /opt/kusu/bin/ranlib...not found Checking for program /opt/kusu/sbin/ranlib...not found Checking for program /usr/pgsql-9.0/bin/ranlib...not found Checking for program /usr/local/bin/ranlib...not found Checking for program /bin/ranlib...not found Checking for program /usr/bin/ranlib...found Defined make macro "RANLIB" to "/usr/bin/ranlib -c" Executing: /usr/bin/ar cr /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/libconf1.a /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conf1.o Executing: /usr/bin/ranlib -c /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/libconf1.a Possible ERROR while running ranlib: stderr: /usr/bin/ranlib: '-c': No such file Ranlib is not functional with your archiver. Try --with-ranlib=true if ranlib is unnecessary. Executing: ar -V stdout: GNU ar 2.17 Copyright 2005 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License. This program has absolutely no warranty. Executing: ar -V stdout: GNU ar 2.17 Copyright 2005 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License. This program has absolutely no warranty. Defined make macro "FAST_AR_FLAGS" to "Scq" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int foo(int a) { return a+1; } Checking for program /opt/FJSVtclang/check/ar...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/ar...not found Checking for program /opt/kusu/bin/ar...not found Checking for program /opt/kusu/sbin/ar...not found Checking for program /usr/pgsql-9.0/bin/ar...not found Checking for program /usr/local/bin/ar...not found Checking for program /bin/ar...not found Checking for program /usr/bin/ar...found Defined make macro "AR" to "/usr/bin/ar" Checking for program /opt/FJSVtclang/check/ranlib...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/ranlib...not found Checking for program /opt/kusu/bin/ranlib...not found Checking for program /opt/kusu/sbin/ranlib...not found Checking for program /usr/pgsql-9.0/bin/ranlib...not found Checking for program /usr/local/bin/ranlib...not found Checking for program /bin/ranlib...not found Checking for program /usr/bin/ranlib...found Defined make macro "RANLIB" to "/usr/bin/ranlib" Executing: /usr/bin/ar cr /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/libconf1.a /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conf1.o Executing: /usr/bin/ranlib /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/libconf1.a Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" extern int foo(int); int main() { int b = foo(1); if (b); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -L/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -lconf1 Defined make macro "AR_FLAGS" to "cr" Defined make macro "AR_LIB_SUFFIX" to "a" Popping language C ================================================================================ TEST checkSharedLinker from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1246) TESTING: checkSharedLinker from config.setCompilers(config/BuildSystem/config/setCompilers.py:1246) Check that the linker can produce shared libraries Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Checking shared linker /usr/bin/ar using flags [] Checking for program /usr/bin/ar...found Defined make macro "LD_SHARED" to "/usr/bin/ar" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int foo(void) {printf("hello"); return 0;} Pushing language C Popping language C Executing: /usr/bin/ar cr /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/libconftest.a /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o ; /usr/bin/ranlib /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/libconftest.a Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int foo(void); int main() { int ret = foo(); if(ret);; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -L/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -lconftest Using shared linker /usr/bin/ar with flags [] and library extension a Executing: uname -s stdout: Linux ================================================================================ TEST checkSharedLinkerPaths from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1324) TESTING: checkSharedLinkerPaths from config.setCompilers(config/BuildSystem/config/setCompilers.py:1324) Determine the shared linker path options - IRIX: -rpath - Linux, OSF: -Wl,-rpath, - Solaris: -R - FreeBSD: -Wl,-R, Pushing language C Executing: uname -s stdout: Linux Executing: mpifcc -V Trying C linker flag -Wl,-rpath, Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -Wl,-rpath,/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o Valid C linker flag -Wl,-rpath,/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 Popping language C Pushing language Cxx Executing: uname -s stdout: Linux Executing: mpifcc -V Trying Cxx linker flag -Wl,-rpath, Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -Wl,-rpath,/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o Valid Cxx linker flag -Wl,-rpath,/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 Popping language Cxx Pushing language FC Executing: uname -s stdout: Linux Executing: mpifcc -V Trying FC linker flag -Wl,-rpath, Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.F Successful compile: Source: program main end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -Wl,-rpath,/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o Valid FC linker flag -Wl,-rpath,/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 Popping language FC ================================================================================ TEST checkLibC from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1359) TESTING: checkLibC from config.setCompilers(config/BuildSystem/config/setCompilers.py:1359) Test whether we need to explicitly include libc in shared linking - Mac OSX requires an explicit reference to libc for shared linking ================================================================================ TEST checkDynamicLinker from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1408) TESTING: checkDynamicLinker from config.setCompilers(config/BuildSystem/config/setCompilers.py:1408) Check that the linker can dynamicaly load shared libraries Checking for header: dlfcn.h All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/dlfcn.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/dlfcn.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 27 "/usr/include/dlfcn.h" #line 1 "/usr/include/bits/dlfcn.h" #line 30 "/usr/include/dlfcn.h" #line 52 "/usr/include/dlfcn.h" extern void *dlopen (const char *__file, int __mode) ; extern int dlclose (void *__handle) ; extern void *dlsym (void * __handle, const char * __name) ; #line 80 "/usr/include/dlfcn.h" extern char *dlerror (void) ; #line 188 "/usr/include/dlfcn.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_DLFCN_H" to "1" Checking for functions [dlopen dlsym dlclose] in library ['dl'] [] Pushing language C All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dlopen(); static void _check_dlopen() { dlopen(); } char dlsym(); static void _check_dlsym() { dlsym(); } char dlclose(); static void _check_dlclose() { dlclose(); } int main() { _check_dlopen(); _check_dlsym(); _check_dlclose();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ldl Defined "HAVE_LIBDL" to "1" Popping language C Adding ['dl'] to LIBS Executing: uname -s stdout: Linux Checking dynamic linker /usr/bin/ar using flags [] Checking for program /usr/bin/ar...found Defined make macro "DYNAMICLINKER" to "/usr/bin/ar" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int foo(void) {printf("test");return 0;} Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Pushing language C Popping language C Executing: /usr/bin/ar -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/libconftest.so /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ar: no operation specified Checking dynamic linker mpifcc using flags ['-shared'] Checking for program /opt/FJSVtclang/check/mpifcc...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/mpifcc...found Defined make macro "DYNAMICLINKER" to "mpifcc" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -shared -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -ldl Valid C linker flag -shared Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int foo(void) {printf("test");return 0;} Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/libconftest.so -shared -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { void *handle = dlopen("/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/libconftest.so", 0); int (*foo)(void) = (int (*)(void)) dlsym(handle, "foo"); if (!foo) { printf("Could not load symbol\n"); return -1; } if ((*foo)()) { printf("Invalid return from foo()\n"); return -1; } if (dlclose(handle)) { printf("Could not close library\n"); return -1; } ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -ldl Using dynamic linker mpifcc with flags ['-shared'] and library extension so ================================================================================ TEST output from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1454) TESTING: output from config.setCompilers(config/BuildSystem/config/setCompilers.py:1454) Output module data as defines and substitutions Substituting "CC" with "mpifcc" Substituting "CFLAGS" with "-Xg -O0" Defined make macro "CC_LINKER_SLFLAG" to "-Wl,-rpath," Substituting "CPP" with "mpifcc -E" Substituting "CPPFLAGS" with "" Substituting "CXX" with "mpiFCC" Substituting "CXX_CXXFLAGS" with "" Substituting "CXXFLAGS" with "-Xg -O0" Substituting "CXX_LINKER_SLFLAG" with "-Wl,-rpath," Substituting "CXXCPP" with "mpiFCC -E" Substituting "CXXCPPFLAGS" with "" Substituting "FC" with "mpifrt" Substituting "FFLAGS" with "-X9 -O0" Defined make macro "FC_LINKER_SLFLAG" to "-Wl,-rpath," Substituting "LDFLAGS" with "" Substituting "LIBS" with "-ldl " Substituting "SHARED_LIBRARY_FLAG" with "" Executing: uname -s stdout: Linux ================================================================================ TEST checkSharedDynamicPicOptions from PETSc.options.sharedLibraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/sharedLibraries.py:37) TESTING: checkSharedDynamicPicOptions from PETSc.options.sharedLibraries(config/PETSc/options/sharedLibraries.py:37) ================================================================================ TEST configureSharedLibraries from PETSc.options.sharedLibraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/sharedLibraries.py:53) TESTING: configureSharedLibraries from PETSc.options.sharedLibraries(config/PETSc/options/sharedLibraries.py:53) Checks whether shared libraries should be used, for which you must - Specify --with-shared-libraries - Have found a working shared linker Defines PETSC_USE_SHARED_LIBRARIES if they are used Defined make rule "shared_arch" with dependencies "" and code [] Defined make macro "BUILDSHAREDLIB" to "no" Defined "HAVE_SHARED_LIBRARIES" to "1" Shared libraries - disabled ================================================================================ TEST configureDynamicLibraries from PETSc.options.sharedLibraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/sharedLibraries.py:96) TESTING: configureDynamicLibraries from PETSc.options.sharedLibraries(config/PETSc/options/sharedLibraries.py:96) Checks whether dynamic loading is available (with dlfcn.h and libdl) Defined "HAVE_DYNAMIC_LIBRARIES" to "1" ================================================================================ TEST configureSerializedFunctions from PETSc.options.sharedLibraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/sharedLibraries.py:102) TESTING: configureSerializedFunctions from PETSc.options.sharedLibraries(config/PETSc/options/sharedLibraries.py:102) Defines PETSC_SERIALIZE_FUNCTIONS if they are used Requires shared libraries ================================================================================ TEST configureIndexSize from PETSc.options.indexTypes(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/indexTypes.py:31) TESTING: configureIndexSize from PETSc.options.indexTypes(config/PETSc/options/indexTypes.py:31) Defined make macro "PETSC_INDEX_SIZE" to "32" ================================================================================ TEST configureCompilerFlags from config.compilerFlags(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilerFlags.py:71) TESTING: configureCompilerFlags from config.compilerFlags(config/BuildSystem/config/compilerFlags.py:71) Get the default compiler flags Pushing language C Executing: mpifcc --version Ignoring default options which were overridden using --CFLAGS -Xg -O0 Optimization options found in CFLAGS. Skipping setting defaults Popping language C Pushing language Cxx Executing: mpiFCC --version Ignoring default options which were overridden using --CXXFLAGS -Xg -O0 Optimization options found in CXXFLAGS. Skipping setting defaults Popping language Cxx Pushing language FC Executing: mpifrt --version Ignoring default options which were overridden using --FFLAGS -X9 -O0 Optimization options found in FFLAGS. Skipping setting defaults Popping language FC ================================================================================ TEST configureDebugging from PETSc.options.debugging(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/debugging.py:25) TESTING: configureDebugging from PETSc.options.debugging(config/PETSc/options/debugging.py:25) Defined "USE_ERRORCHECKING" to "1" Executing: mpifcc --help ================================================================================ TEST checkRestrict from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:137) TESTING: checkRestrict from config.compilers(config/BuildSystem/config/compilers.py:137) Check for the C/CXX restrict keyword Pushing language C All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.c Possible ERROR while running compiler: exit code 512 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.c", line 5: error: expected a ";" float * restrict x;; ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.c", line 5: warning: variable "restrict" was declared but never referenced float * restrict x;; ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" int main() { float * restrict x;; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.c", line 5: warning: variable "x" was declared but never referenced float * __restrict__ x;; ^ Source: #include "confdefs.h" #include "conffix.h" int main() { float * __restrict__ x;; return 0; } compilers: Set C restrict keyword to __restrict__ Defined "C_RESTRICT" to " __restrict__" Popping language C ================================================================================ TEST checkCFormatting from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:310) TESTING: checkCFormatting from config.compilers(config/BuildSystem/config/compilers.py:310) Activate format string checking if using the GNU compilers ================================================================================ TEST checkCStaticInline from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:108) TESTING: checkCStaticInline from config.compilers(config/BuildSystem/config/compilers.py:108) Check for C keyword: static inline Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" static inline int foo(int a) {return a;} int main() { foo(1);; return 0; } compilers: Set C StaticInline keyword to static inline Popping language C Defined "C_STATIC_INLINE" to "static inline" ================================================================================ TEST checkDynamicLoadFlag from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:321) TESTING: checkDynamicLoadFlag from config.compilers(config/BuildSystem/config/compilers.py:321) Checks that dlopen() takes RTLD_XXX, and defines PETSC_HAVE_RTLD_XXX if it does Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include char *libname; int main() { dlopen(libname, RTLD_LAZY); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -ldl Defined "HAVE_RTLD_LAZY" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include char *libname; int main() { dlopen(libname, RTLD_NOW); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -ldl Defined "HAVE_RTLD_NOW" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include char *libname; int main() { dlopen(libname, RTLD_LOCAL); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -ldl Defined "HAVE_RTLD_LOCAL" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include char *libname; int main() { dlopen(libname, RTLD_GLOBAL); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -ldl Defined "HAVE_RTLD_GLOBAL" to "1" ================================================================================ TEST checkCLibraries from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:164) TESTING: checkCLibraries from config.compilers(config/BuildSystem/config/compilers.py:164) Determines the libraries needed to link with C Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest -### -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -ldl stdout: /usr/bin/ld --eh-frame-hdr -m elf64_sparc -YP,/usr/lib64 -dynamic-linker /lib64/ld-linux.so.2 /usr/lib64/crt1.o /usr/lib64/crti.o /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtbegin.o -YP,/usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4 -u__metInit -ltrtmet -ltrtmet_c -Qy -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lm -lnsl -lutil //opt/FJSVtclang/GM-1.2.0-20/bin/../lib64/fjrtprof.o -T//opt/FJSVtclang/GM-1.2.0-20/bin/../util/lib/data-256mb.lds -L//opt/FJSVtclang/GM-1.2.0-20/bin/../lib64 -u_xfdb_Init -ltrtfdb -lfjrtcl -ltrtth -L/usr/lib64 -lmpg -lmpgpthread -lpapi -lrt -lelf -ldl -lgcc_s -lgcc -lc -lgcc_s -lgcc -lc /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtend.o -L/opt/FJSVxosmmm/lib64 /usr/lib64/crtn.o //opt/FJSVtclang/GM-1.2.0-20/bin/../lib/aopt2 -ir-strip /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest Popping language C compilers: Checking arg /usr/bin/ld compilers: Unknown arg /usr/bin/ld compilers: Checking arg --eh-frame-hdr compilers: Unknown arg --eh-frame-hdr compilers: Checking arg -m compilers: Unknown arg -m compilers: Checking arg elf64_sparc compilers: Unknown arg elf64_sparc compilers: Checking arg -YP,/usr/lib64 compilers: Unknown arg -YP,/usr/lib64 compilers: Checking arg -dynamic-linker compilers: Unknown arg -dynamic-linker compilers: Checking arg /lib64/ld-linux.so.2 compilers: Unknown arg /lib64/ld-linux.so.2 compilers: Checking arg /usr/lib64/crt1.o compilers: Unknown arg /usr/lib64/crt1.o compilers: Checking arg /usr/lib64/crti.o compilers: Unknown arg /usr/lib64/crti.o compilers: Checking arg /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtbegin.o compilers: Unknown arg /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtbegin.o compilers: Checking arg -YP,/usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4 compilers: Unknown arg -YP,/usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4 compilers: Checking arg -u__metInit compilers: Unknown arg -u__metInit compilers: Checking arg -ltrtmet compilers: Found library : -ltrtmet compilers: Checking arg -ltrtmet_c compilers: Found library : -ltrtmet_c compilers: Checking arg -Qy compilers: Unknown arg -Qy compilers: Checking arg -o compilers: Unknown arg -o compilers: Checking arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest compilers: Unknown arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest compilers: Checking arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o compilers: Unknown arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o compilers: Checking arg -ldl compilers: Found library : -ldl compilers: Checking arg -L/opt/FJSVpxtof/sparc64fx/lib64 compilers: Found library directory: -L/opt/FJSVpxtof/sparc64fx/lib64 compilers: Checking arg -L/opt/FJSVtclang/GM-1.2.0-20/lib64 compilers: Found library directory: -L/opt/FJSVtclang/GM-1.2.0-20/lib64 compilers: Checking arg -lmpi compilers: Found library : -lmpi compilers: Checking arg -ltofucom compilers: Found library : -ltofucom compilers: Checking arg -ltofutop compilers: Found library : -ltofutop compilers: Checking arg -lm compilers: Checking arg -lnsl compilers: Found library : -lnsl compilers: Checking arg -lutil compilers: Found library : -lutil compilers: Checking arg //opt/FJSVtclang/GM-1.2.0-20/bin/../lib64/fjrtprof.o compilers: Unknown arg //opt/FJSVtclang/GM-1.2.0-20/bin/../lib64/fjrtprof.o compilers: Checking arg -T//opt/FJSVtclang/GM-1.2.0-20/bin/../util/lib/data-256mb.lds compilers: Unknown arg -T//opt/FJSVtclang/GM-1.2.0-20/bin/../util/lib/data-256mb.lds compilers: Checking arg -L//opt/FJSVtclang/GM-1.2.0-20/bin/../lib64 compilers: Found library directory: -L//opt/FJSVtclang/GM-1.2.0-20/lib64 compilers: Checking arg -u_xfdb_Init compilers: Unknown arg -u_xfdb_Init compilers: Checking arg -ltrtfdb compilers: Found library : -ltrtfdb compilers: Checking arg -lfjrtcl compilers: Found library : -lfjrtcl compilers: Checking arg -ltrtth compilers: Found library : -ltrtth compilers: Checking arg -L/usr/lib64 compilers: Checking arg -lmpg compilers: Found library : -lmpg compilers: Checking arg -lmpgpthread compilers: Found library : -lmpgpthread compilers: Checking arg -lpapi compilers: Found library : -lpapi compilers: Checking arg -lrt compilers: Found library : -lrt compilers: Checking arg -lelf compilers: Found library : -lelf compilers: Checking arg -ldl compilers: Checking arg -lgcc_s compilers: Found library : -lgcc_s compilers: Checking arg -lgcc compilers: Skipping system library: -lgcc compilers: Checking arg -lc compilers: Skipping system library: -lc compilers: Checking arg -lgcc_s compilers: Checking arg -lgcc compilers: Skipping system library: -lgcc compilers: Checking arg -lc compilers: Skipping system library: -lc compilers: Checking arg /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtend.o compilers: Unknown arg /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtend.o compilers: Checking arg -L/opt/FJSVxosmmm/lib64 compilers: Found library directory: -L/opt/FJSVxosmmm/lib64 compilers: Checking arg /usr/lib64/crtn.o compilers: Unknown arg /usr/lib64/crtn.o compilers: Checking arg //opt/FJSVtclang/GM-1.2.0-20/bin/../lib/aopt2 compilers: Unknown arg //opt/FJSVtclang/GM-1.2.0-20/bin/../lib/aopt2 compilers: Checking arg -ir-strip compilers: Unknown arg -ir-strip compilers: Checking arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest compilers: Unknown arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest compilers: Libraries needed to link C code with another linker: ['-ltrtmet', '-ltrtmet_c', '-ldl', '-L/opt/FJSVpxtof/sparc64fx/lib64', '-L/opt/FJSVtclang/GM-1.2.0-20/lib64', '-lmpi', '-ltofucom', '-ltofutop', '-lnsl', '-lutil', '-L//opt/FJSVtclang/GM-1.2.0-20/lib64', '-ltrtfdb', '-lfjrtcl', '-ltrtth', '-lmpg', '-lmpgpthread', '-lpapi', '-lrt', '-lelf', '-lgcc_s', '-L/opt/FJSVxosmmm/lib64'] compilers: Check that C libraries can be used from Fortran Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.F Successful compile: Source: program main end Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.F Successful compile: Source: program main end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.F Successful compile: Source: program main end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lpetsc-ufod4vtr9mqHvKIQiVAm Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.F Successful compile: Source: program main end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest Popping language FC ================================================================================ TEST checkDependencyGenerationFlag from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:1328) TESTING: checkDependencyGenerationFlag from config.compilers(config/BuildSystem/config/compilers.py:1328) Check if -MMD works for dependency generation, and add it if it does Pushing language C Trying C compiler flag -MMD -MP Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 -MMD -MP /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejected C compiler flag -MMD -MP because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.d) was generated Trying C compiler flag -MMD Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 -MMD /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejected C compiler flag -MMD because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.d) was generated Trying C compiler flag -xMMD Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 -xMMD /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejected C compiler flag -xMMD because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.d) was generated Trying C compiler flag -qmakedep=gcc Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 -qmakedep=gcc /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Possible ERROR while running compiler: stderr: fcc: warning: -qmakedep=gcc is unrecognized option. This option is passed to the linker. Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -qmakedep=gcc due to fcc: warning: -qmakedep=gcc is unrecognized option. This option is passed to the linker. Rejected C compiler flag -qmakedep=gcc Trying C compiler flag -MD Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 -MD /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejected C compiler flag -MD because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.d) was generated Popping language C Pushing language Cxx Trying Cxx compiler flag -MMD -MP Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 -MMD -MP /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejected Cxx compiler flag -MMD -MP because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.d) was generated Trying Cxx compiler flag -MMD Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 -MMD /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejected Cxx compiler flag -MMD because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.d) was generated Trying Cxx compiler flag -xMMD Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 -xMMD /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejected Cxx compiler flag -xMMD because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.d) was generated Trying Cxx compiler flag -qmakedep=gcc Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 -qmakedep=gcc /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc Possible ERROR while running compiler: stderr: FCC: warning: -qmakedep=gcc is unrecognized option. This option is passed to the linker. Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -qmakedep=gcc due to FCC: warning: -qmakedep=gcc is unrecognized option. This option is passed to the linker. Rejected Cxx compiler flag -qmakedep=gcc Trying Cxx compiler flag -MD Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 -MD /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejected Cxx compiler flag -MD because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.d) was generated Popping language Cxx Pushing language FC Trying FC compiler flag -MMD -MP Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -X9 -O0 -MMD -MP /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.F Successful compile: Source: program main end Rejected FC compiler flag -MMD -MP because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.d) was generated Trying FC compiler flag -MMD Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -X9 -O0 -MMD /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.F Successful compile: Source: program main end Rejected FC compiler flag -MMD because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.d) was generated Trying FC compiler flag -xMMD Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -X9 -O0 -xMMD /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.F Successful compile: Source: program main end Rejected FC compiler flag -xMMD because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.d) was generated Trying FC compiler flag -qmakedep=gcc Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -X9 -O0 -qmakedep=gcc /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.F Possible ERROR while running compiler: stderr: frt: warning: -qmakedep=gcc cannot be specified. Source: program main end Rejected FC compiler flag -qmakedep=gcc because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.d) was generated Trying FC compiler flag -MD Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -X9 -O0 -MD /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.F Successful compile: Source: program main end Rejected FC compiler flag -MD because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.d) was generated Popping language FC ================================================================================ TEST checkC99Flag from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:1372) TESTING: checkC99Flag from config.compilers(config/BuildSystem/config/compilers.py:1372) Check for -std=c99 or equivalent flag Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Possible ERROR while running compiler: exit code 512 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c", line 10: error: expected an expression for (int i=0; i<2; i++){ ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c", line 10: error: identifier "i" is undefined for (int i=0; i<2; i++){ ^ 2 errors detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" int main() { int x[2],y; y = 5; // c++ comment int j = 2; for (int i=0; i<2; i++){ x[i] = i*j*y; } ; return 0; } Rejecting compiler flag due to nonzero status from link Rejecting compiler flag due to "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c", line 10: error: expected an expression for (int i=0; i<2; i++){ ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c", line 10: error: identifier "i" is undefined for (int i=0; i<2; i++){ ^ 2 errors detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c". PETSc Error: No output file produced Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 -std=c99 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c", line 6: warning: variable "x" was set but never used int x[2],y; ^ Source: #include "confdefs.h" #include "conffix.h" int main() { int x[2],y; y = 5; // c++ comment int j = 2; for (int i=0; i<2; i++){ x[i] = i*j*y; } ; return 0; } Accepted C99 compile flag: -std=c99 Popping language C Executing: mpiFCC --help ================================================================================ TEST checkRestrict from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:137) TESTING: checkRestrict from config.compilers(config/BuildSystem/config/compilers.py:137) Check for the C/CXX restrict keyword Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.cc Possible ERROR while running compiler: exit code 512 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.cc", line 5: error: expected a ";" float * restrict x;; ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.cc", line 5: warning: variable "restrict" was declared but never referenced float * restrict x;; ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.cc". Source: #include "confdefs.h" #include "conffix.h" int main() { float * restrict x;; return 0; } Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.cc Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.cc", line 5: warning: variable "x" was declared but never referenced float * __restrict__ x;; ^ Source: #include "confdefs.h" #include "conffix.h" int main() { float * __restrict__ x;; return 0; } compilers: Set Cxx restrict keyword to __restrict__ Defined "CXX_RESTRICT" to " __restrict__" Popping language Cxx ================================================================================ TEST checkCxxNamespace from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:359) TESTING: checkCxxNamespace from config.compilers(config/BuildSystem/config/compilers.py:359) Checks that C++ compiler supports namespaces, and if it does defines HAVE_CXX_NAMESPACE Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" namespace petsc {int dummy;} int main() { ; return 0; } Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" template struct a {}; namespace trouble{ template struct a : public ::a {}; } trouble::a uugh; int main() { ; return 0; } Popping language Cxx compilers: C++ has namespaces Defined "HAVE_CXX_NAMESPACE" to "1" ================================================================================ TEST checkCxxOptionalExtensions from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:334) TESTING: checkCxxOptionalExtensions from config.compilers(config/BuildSystem/config/compilers.py:334) Check whether the C++ compiler (IBM xlC, OSF5) need special flag for .c files which contain C++ Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { class somename { int i; };; return 0; } Added Cxx compiler flag Popping language Cxx ================================================================================ TEST checkCxxStaticInline from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:122) TESTING: checkCxxStaticInline from config.compilers(config/BuildSystem/config/compilers.py:122) Check for C++ keyword: static inline Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" static inline int foo(int a) {return a;} int main() { foo(1);; return 0; } compilers: Set Cxx StaticInline keyword to static inline Popping language Cxx Defined "CXX_STATIC_INLINE" to "static inline" ================================================================================ TEST checkCxxLibraries from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:413) TESTING: checkCxxLibraries from config.compilers(config/BuildSystem/config/compilers.py:413) Determines the libraries needed to link with C++ Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest -### -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl stdout: /usr/bin/ld --eh-frame-hdr -m elf64_sparc -YP,/usr/lib64 -dynamic-linker /lib64/ld-linux.so.2 /usr/lib64/crt1.o /usr/lib64/crti.o /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtbegin.o -YP,/usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4 -u__metInit -ltrtmetcpp -ltrtmet_c -Qy -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi_cxx -lmpi -ltofucom -ltofutop -lm -lnsl -lutil //opt/FJSVtclang/GM-1.2.0-20/bin/../lib64/fjrtprof.o -T//opt/FJSVtclang/GM-1.2.0-20/bin/../util/lib/data-256mb.lds -L//opt/FJSVtclang/GM-1.2.0-20/bin/../lib64 -lfjdemgl -u_xfdb_Init -ltrtfdb -lfjrtcl -ltrtth -L/usr/lib64 -lstd_mt -lmpg -lmpgpthread -lpthread -lpapi -lm -lrt -lelf -ldl -lstdc++ -lgcc_s -lgcc -lc -lgcc_s -lgcc -lc /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtend.o -L/opt/FJSVxosmmm/lib64 /usr/lib64/crtn.o //opt/FJSVtclang/GM-1.2.0-20/bin/../lib/aopt2 -ir-strip /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest Popping language Cxx compilers: Checking arg /usr/bin/ld compilers: Unknown arg /usr/bin/ld compilers: Checking arg --eh-frame-hdr compilers: Unknown arg --eh-frame-hdr compilers: Checking arg -m compilers: Unknown arg -m compilers: Checking arg elf64_sparc compilers: Unknown arg elf64_sparc compilers: Checking arg -YP,/usr/lib64 compilers: Unknown arg -YP,/usr/lib64 compilers: Checking arg -dynamic-linker compilers: Unknown arg -dynamic-linker compilers: Checking arg /lib64/ld-linux.so.2 compilers: Unknown arg /lib64/ld-linux.so.2 compilers: Checking arg /usr/lib64/crt1.o compilers: Unknown arg /usr/lib64/crt1.o compilers: Checking arg /usr/lib64/crti.o compilers: Unknown arg /usr/lib64/crti.o compilers: Checking arg /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtbegin.o compilers: Unknown arg /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtbegin.o compilers: Checking arg -YP,/usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4 compilers: Unknown arg -YP,/usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4 compilers: Checking arg -u__metInit compilers: Unknown arg -u__metInit compilers: Checking arg -ltrtmetcpp compilers: Found library: -ltrtmetcpp compilers: Checking arg -ltrtmet_c compilers: Found library: -ltrtmet_c Library already in C list so skipping in C++ compilers: Checking arg -Qy compilers: Unknown arg -Qy compilers: Checking arg -o compilers: Unknown arg -o compilers: Checking arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest compilers: Unknown arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest compilers: Checking arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o compilers: Unknown arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o compilers: Checking arg -ltrtmet compilers: Found library: -ltrtmet Library already in C list so skipping in C++ compilers: Checking arg -ltrtmet_c compilers: Checking arg -ldl compilers: Found library: -ldl Library already in C list so skipping in C++ compilers: Checking arg -L/opt/FJSVpxtof/sparc64fx/lib64 compilers: Found library directory: -L/opt/FJSVpxtof/sparc64fx/lib64 compilers: Checking arg -L/opt/FJSVtclang/GM-1.2.0-20/lib64 compilers: Found library directory: -L/opt/FJSVtclang/GM-1.2.0-20/lib64 compilers: Checking arg -lmpi compilers: Found library: -lmpi Library already in C list so skipping in C++ compilers: Checking arg -ltofucom compilers: Found library: -ltofucom Library already in C list so skipping in C++ compilers: Checking arg -ltofutop compilers: Found library: -ltofutop Library already in C list so skipping in C++ compilers: Checking arg -lnsl compilers: Found library: -lnsl Library already in C list so skipping in C++ compilers: Checking arg -lutil compilers: Found library: -lutil Library already in C list so skipping in C++ compilers: Checking arg -L//opt/FJSVtclang/GM-1.2.0-20/lib64 compilers: Found library directory: -L//opt/FJSVtclang/GM-1.2.0-20/lib64 compilers: Checking arg -ltrtfdb compilers: Found library: -ltrtfdb Library already in C list so skipping in C++ compilers: Checking arg -lfjrtcl compilers: Found library: -lfjrtcl Library already in C list so skipping in C++ compilers: Checking arg -ltrtth compilers: Found library: -ltrtth Library already in C list so skipping in C++ compilers: Checking arg -lmpg compilers: Found library: -lmpg Library already in C list so skipping in C++ compilers: Checking arg -lmpgpthread compilers: Found library: -lmpgpthread Library already in C list so skipping in C++ compilers: Checking arg -lpapi compilers: Found library: -lpapi Library already in C list so skipping in C++ compilers: Checking arg -lrt compilers: Found library: -lrt Library already in C list so skipping in C++ compilers: Checking arg -lelf compilers: Found library: -lelf Library already in C list so skipping in C++ compilers: Checking arg -lgcc_s compilers: Found library: -lgcc_s Library already in C list so skipping in C++ compilers: Checking arg -L/opt/FJSVxosmmm/lib64 compilers: Found library directory: -L/opt/FJSVxosmmm/lib64 compilers: Checking arg -ldl compilers: Checking arg -L/opt/FJSVpxtof/sparc64fx/lib64 compilers: Checking arg -L/opt/FJSVtclang/GM-1.2.0-20/lib64 compilers: Checking arg -lmpi_cxx compilers: Found library: -lmpi_cxx compilers: Checking arg -lmpi compilers: Checking arg -ltofucom compilers: Checking arg -ltofutop compilers: Checking arg -lm compilers: Checking arg -lnsl compilers: Checking arg -lutil compilers: Checking arg //opt/FJSVtclang/GM-1.2.0-20/bin/../lib64/fjrtprof.o compilers: Unknown arg //opt/FJSVtclang/GM-1.2.0-20/bin/../lib64/fjrtprof.o compilers: Checking arg -T//opt/FJSVtclang/GM-1.2.0-20/bin/../util/lib/data-256mb.lds compilers: Unknown arg -T//opt/FJSVtclang/GM-1.2.0-20/bin/../util/lib/data-256mb.lds compilers: Checking arg -L//opt/FJSVtclang/GM-1.2.0-20/bin/../lib64 compilers: Checking arg -lfjdemgl compilers: Found library: -lfjdemgl compilers: Checking arg -u_xfdb_Init compilers: Unknown arg -u_xfdb_Init compilers: Checking arg -ltrtfdb compilers: Checking arg -lfjrtcl compilers: Checking arg -ltrtth compilers: Checking arg -L/usr/lib64 compilers: Checking arg -lstd_mt compilers: Found library: -lstd_mt compilers: Checking arg -lmpg compilers: Checking arg -lmpgpthread compilers: Checking arg -lpthread compilers: Found library: -lpthread compilers: Checking arg -lpapi compilers: Checking arg -lm compilers: Checking arg -lrt compilers: Checking arg -lelf compilers: Checking arg -ldl compilers: Checking arg -lstdc++ compilers: Found library: -lstdc++ compilers: Checking arg -lgcc_s compilers: Checking arg -lgcc compilers: Skipping system library: -lgcc compilers: Checking arg -lc compilers: Skipping system library: -lc compilers: Checking arg -lgcc_s compilers: Checking arg -lgcc compilers: Skipping system library: -lgcc compilers: Checking arg -lc compilers: Skipping system library: -lc compilers: Checking arg /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtend.o compilers: Unknown arg /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtend.o compilers: Checking arg -L/opt/FJSVxosmmm/lib64 compilers: Checking arg /usr/lib64/crtn.o compilers: Unknown arg /usr/lib64/crtn.o compilers: Checking arg //opt/FJSVtclang/GM-1.2.0-20/bin/../lib/aopt2 compilers: Unknown arg //opt/FJSVtclang/GM-1.2.0-20/bin/../lib/aopt2 compilers: Checking arg -ir-strip compilers: Unknown arg -ir-strip compilers: Checking arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest compilers: Unknown arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest compilers: Libraries needed to link Cxx code with another linker: ['-ltrtmetcpp', '-L/opt/FJSVpxtof/sparc64fx/lib64', '-L/opt/FJSVtclang/GM-1.2.0-20/lib64', '-L//opt/FJSVtclang/GM-1.2.0-20/lib64', '-L/opt/FJSVxosmmm/lib64', '-lmpi_cxx', '-lfjdemgl', '-lstd_mt', '-lpthread', '-lstdc++'] compilers: Check that Cxx libraries can be used from C Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lpetsc-ufod4vtr9mqHvKIQiVAm Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest Popping language C compilers: Check that Cxx libraries can be used from Fortran Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.F Successful compile: Source: program main end Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.F Successful compile: Source: program main end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.F Successful compile: Source: program main end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lpetsc-ufod4vtr9mqHvKIQiVAm Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.F Successful compile: Source: program main end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest Popping language FC ================================================================================ TEST checkCxx11 from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:374) TESTING: checkCxx11 from config.compilers(config/BuildSystem/config/compilers.py:374) Determine the option needed to support the C++11 dialect We auto-detect C++11 if the compiler supports it without options, otherwise we require with-cxx-dialect=C++11 to try adding flags to support it. Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc", line 4: catastrophic error: cannot open source file "random" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" #include template constexpr T Cubed( T x ) { return x*x*x; } int main() { std::random_device rd; std::mt19937 mt(rd()); std::normal_distribution dist(0,1); const double x = dist(mt); ; return 0; } Rejecting compiler flag due to nonzero status from link Rejecting compiler flag due to "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc", line 4: catastrophic error: cannot open source file "random" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc". Compilation terminated. PETSc Error: No output file produced Popping language Cxx ================================================================================ TEST checkFortranTypeSizes from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:572) TESTING: checkFortranTypeSizes from config.compilers(config/BuildSystem/config/compilers.py:572) Check whether real*8 is supported and suggest flags which will allow support Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.F Possible ERROR while running compiler: stderr: Fortran diagnostic messages: program name(main) jwd2006i-i "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.F", line 2: 'variable' is declared but never referenced. Source: program main real*8 variable end Popping language FC ================================================================================ TEST checkFortranNameMangling from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:631) TESTING: checkFortranNameMangling from config.compilers(config/BuildSystem/config/compilers.py:631) Checks Fortran name mangling, and defines HAVE_FORTRAN_UNDERSCORE, HAVE_FORTRAN_NOUNDERSCORE, HAVE_FORTRAN_CAPS, or HAVE_FORTRAN_STDCALL Testing Fortran mangling type underscore with code void d1chk_(void){return;} Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" void d1chk_(void){return;} Popping language C Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.F Successful compile: Source: program main call d1chk() end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/confc.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language FC compilers: Fortran name mangling is underscore Defined "HAVE_FORTRAN_UNDERSCORE" to "1" ================================================================================ TEST checkFortranNameManglingDouble from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:668) TESTING: checkFortranNameManglingDouble from config.compilers(config/BuildSystem/config/compilers.py:668) Checks if symbols containing an underscore append an extra underscore, and defines HAVE_FORTRAN_UNDERSCORE_UNDERSCORE if necessary Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" void d1_chk__(void){return;} Popping language C Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.F Successful compile: Source: program main call d1_chk() end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/confc.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o: In function `MAIN__': conftest.F:(.text+0x30): undefined reference to `d1_chk_' /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o:(.data+0x0): undefined reference to `d1_chk_' Popping language FC ================================================================================ TEST checkFortranPreprocessor from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:678) TESTING: checkFortranPreprocessor from config.compilers(config/BuildSystem/config/compilers.py:678) Determine if Fortran handles preprocessing properly Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.F Successful compile: Source: program main #define dummy dummy #ifndef dummy fooey #endif end Added FC compiler flag Popping language FC compilers: Fortran uses CPP preprocessor ================================================================================ TEST checkFortranDefineCompilerOption from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:699) TESTING: checkFortranDefineCompilerOption from config.compilers(config/BuildSystem/config/compilers.py:699) Check if -WF,-Dfoobar or -Dfoobar is the compiler option to define a macro Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -X9 -O0 -DTesting /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.F Successful compile: Source: program main #define dummy dummy #ifndef Testing fooey #endif end Defined make macro "FC_DEFINE_FLAG" to "-D" Popping language FC compilers: Fortran uses -D for defining macro ================================================================================ TEST checkFortranLibraries from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:716) TESTING: checkFortranLibraries from config.compilers(config/BuildSystem/config/compilers.py:716) Substitutes for FLIBS the libraries needed to link with Fortran This macro is intended to be used in those situations when it is necessary to mix, e.g. C++ and Fortran 77, source code into a single program or shared library. For example, if object files from a C++ and Fortran 77 compiler must be linked together, then the C++ compiler/linker must be used for linking (since special C++-ish things need to happen at link time like calling global constructors, instantiating templates, enabling exception support, etc.). However, the Fortran 77 intrinsic and run-time libraries must be linked in as well, but the C++ compiler/linker does not know how to add these Fortran 77 libraries. This code was translated from the autoconf macro which was packaged in its current form by Matthew D. Langston . However, nearly all of this macro came from the OCTAVE_FLIBS macro in octave-2.0.13/aclocal.m4, and full credit should go to John W. Eaton for writing this extremely useful macro. Pushing language FC Executing: mpifrt -V Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.F Successful compile: Source: program main end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest -v -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language FC compilers: Libraries needed to link Fortran code with the C linker: [] compilers: Libraries needed to link Fortran main with the C linker: [] compilers: Check that Fortran libraries can be used from C Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lpetsc-ufod4vtr9mqHvKIQiVAm Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest Popping language C compilers: Check that Fortran libraries can be used from C++ Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lpetsc-ufod4vtr9mqHvKIQiVAm Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest Popping language Cxx compilers: Fortran libraries can be used from C++ ================================================================================ TEST checkFortranLinkingCxx from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:1062) TESTING: checkFortranLinkingCxx from config.compilers(config/BuildSystem/config/compilers.py:1062) Check that Fortran can be linked against C++ Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" extern "C" void d1chk_(void); void foo(void){d1chk_();} Popping language Cxx Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" extern "C" void d1chk_(void); void d1chk_(void){return;} Popping language Cxx Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.F Successful compile: Source: program main call d1chk() end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/cxxobj.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/confc.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/cxxobj.o:(.eh_frame+0x12): undefined reference to `__gxx_personality_v0' Popping language FC Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" extern "C" void d1chk_(void); void d1chk_(void){return;} Popping language Cxx Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.F Successful compile: Source: program main call d1chk() end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/cxxobj.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/confc.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language FC compilers: Fortran can link C++ functions using the C++ compiler libraries ================================================================================ TEST checkFortran90 from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:1097) TESTING: checkFortran90 from config.compilers(config/BuildSystem/config/compilers.py:1097) Determine whether the Fortran compiler handles F90 Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.F Successful compile: Source: program main INTEGER, PARAMETER :: int = SELECTED_INT_KIND(8) INTEGER (KIND=int) :: ierr ierr = 1 end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "USING_F90" to "1" Fortran compiler supports F90 Popping language FC ================================================================================ TEST checkFortran2003 from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:1110) TESTING: checkFortran2003 from config.compilers(config/BuildSystem/config/compilers.py:1110) Determine whether the Fortran compiler handles F2003 Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.F Successful compile: Source: program main use,intrinsic :: iso_c_binding Type(C_Ptr),Dimension(:),Pointer :: CArray character(kind=c_char),pointer :: nullc => null() character(kind=c_char,len=5),dimension(:),pointer::list1 allocate(list1(5)) CArray = (/(c_loc(list1(i)),i=1,5),c_loc(nullc)/) end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "USING_F2003" to "1" Fortran compiler supports F2003 Popping language FC ================================================================================ TEST checkFortran90Array from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:1130) TESTING: checkFortran90Array from config.compilers(config/BuildSystem/config/compilers.py:1130) Check for F90 array interfaces Executing: uname -s stdout: Linux Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include void f90arraytest_(void* a1, void* a2,void* a3, void* i) { printf("arrays [%p %p %p]\n",a1,a2,a3); fflush(stdout); return; } void f90ptrtest_(void* a1, void* a2,void* a3, void* i, void* p1 ,void* p2, void* p3) { printf("arrays [%p %p %p]\n",a1,a2,a3); if ((p1 == p3) && (p1 != p2)) { printf("pointers match! [%p %p] [%p]\n",p1,p3,p2); fflush(stdout); } else { printf("pointers do not match! [%p %p] [%p]\n",p1,p3,p2); fflush(stdout); exit(111); } return; } Popping language C Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.F Successful compile: Source: program main Interface Subroutine f90ptrtest(p1,p2,p3,i) integer, pointer :: p1(:,:) integer, pointer :: p2(:,:) integer, pointer :: p3(:,:) integer i End Subroutine End Interface integer, pointer :: ptr1(:,:),ptr2(:,:) integer, target :: array(6:8,9:21) integer in in = 25 ptr1 => array ptr2 => array call f90arraytest(ptr1,ptr2,ptr1,in) call f90ptrtest(ptr1,ptr2,ptr1,in) end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/fooobj.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest stdout: arrays [0x20000ac0 0x20000ac0 0x20000ac0] arrays [0x20000a60 0x20000a00 0x20000a60] pointers match! [0x20000a60 0x20000a60] [0x20000a00] Popping language FC Defined "HAVE_F90_2PTR_ARG" to "1" compilers: F90 compiler uses two arguments for array pointers ================================================================================ TEST checkFortranModuleInclude from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:1217) TESTING: checkFortranModuleInclude from config.compilers(config/BuildSystem/config/compilers.py:1217) Figures out what flag is used to specify the include path for Fortran modules Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.F Successful compile: Source: module configtest integer testint parameter (testint = 42) end module configtest Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/confdir -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.F Successful compile: Source: program main use configtest write(*,*) testint end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/confdir -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/configtest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl compilers: Fortran module include flag -I found Popping language FC ================================================================================ TEST checkFortranModuleOutput from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:1283) TESTING: checkFortranModuleOutput from config.compilers(config/BuildSystem/config/compilers.py:1283) Figures out what flag is used to specify the include path for Fortran modules Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -module /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/confdir -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.F Successful compile: Source: module configtest integer testint parameter (testint = 42) end module configtest compilers: Fortran module output flag -module failed Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -module:/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/confdir -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.F Successful compile: Source: module configtest integer testint parameter (testint = 42) end module configtest compilers: Fortran module output flag -module: failed Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -fmod=/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/confdir -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.F Possible ERROR while running compiler: stderr: frt: warning: Invalid suboption mod=/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/confdir specified for -f. Source: module configtest integer testint parameter (testint = 42) end module configtest compilers: Fortran module output flag -fmod= failed Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -J/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/confdir -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.F Possible ERROR while running compiler: stderr: frt: warning: -J/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/confdir is unrecognized option. This option is passed to the linker. Source: module configtest integer testint parameter (testint = 42) end module configtest compilers: Fortran module output flag -J failed Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -M/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/confdir -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.F Successful compile: Source: module configtest integer testint parameter (testint = 42) end module configtest compilers: Fortran module output flag -M found Popping language FC ================================================================================ TEST setupFrameworkCompilers from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:1437) TESTING: setupFrameworkCompilers from config.compilers(config/BuildSystem/config/compilers.py:1437) ================================================================================ TEST configureClosure from config.utilities.closure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/closure.py:18) TESTING: configureClosure from config.utilities.closure(config/BuildSystem/config/utilities/closure.py:18) Determine if Apple ^close syntax is supported in C Pushing language C All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure/conftest.c Possible ERROR while running compiler: exit code 512 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure/conftest.c", line 6: error: expected an identifier int (^closure)(int);; ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include int main() { int (^closure)(int);; return 0; } Compile failed inside link ================================================================================ TEST configureFortranCPP from PETSc.options.fortranCPP(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/fortranCPP.py:27) TESTING: configureFortranCPP from PETSc.options.fortranCPP(config/PETSc/options/fortranCPP.py:27) Handle case where Fortran cannot preprocess properly Defined make rule ".f.o .f90.o .f95.o" with dependencies "" and code ['${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FC_FLAGS} ${FFLAGS} -o $@ $<'] Defined make rule ".f.a" with dependencies "" and code ['${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FC_FLAGS} ${FFLAGS} $<', '-${AR} ${AR_FLAGS} ${LIBNAME} $*.o', '-${RM} $*.o'] Defined make rule ".F.o .F90.o .F95.o" with dependencies "" and code ['${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FC_FLAGS} ${FFLAGS} ${FCPPFLAGS} -o $@ $<'] Defined make rule ".F.a" with dependencies "" and code ['${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FC_FLAGS} ${FFLAGS} ${FCPPFLAGS} $<', '-${AR} ${AR_FLAGS} ${LIBNAME} $*.o', '-${RM} $*.o'] Defined "USE_FORTRAN_INTERFACES" to "1" ================================================================================ TEST checkStdC from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:105) TESTING: checkStdC from config.headers(config/BuildSystem/config/headers.py:105) Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include int main() { ; return 0; } Source: #include "confdefs.h" #include "conffix.h" #include Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/string.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/string.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 34 "/usr/include/string.h" extern void *memcpy (void * __dest, const void * __src, size_t __n) ; extern void *memmove (void *__dest, const void *__src, size_t __n) ; extern void *memccpy (void * __dest, const void * __src, int __c, size_t __n) ; extern void *memset (void *__s, int __c, size_t __n) ; extern int memcmp (const void *__s1, const void *__s2, size_t __n) ; extern void *memchr (const void *__s, int __c, size_t __n) ; #line 80 "/usr/include/string.h" extern char *strcpy (char * __dest, const char * __src) ; extern char *strncpy (char * __dest, const char * __src, size_t __n) ; extern char *strcat (char * __dest, const char * __src) ; extern char *strncat (char * __dest, const char * __src, size_t __n) ; extern int strcmp (const char *__s1, const char *__s2) ; extern int strncmp (const char *__s1, const char *__s2, size_t __n) ; extern int strcoll (const char *__s1, const char *__s2) ; extern size_t strxfrm (char * __dest, const char * __src, size_t __n) ; #line 127 "/usr/include/string.h" extern char *strdup (const char *__s) ; #line 164 "/usr/include/string.h" extern char *strchr (const char *__s, int __c) ; extern char *strrchr (const char *__s, int __c) ; #line 180 "/usr/include/string.h" extern size_t strcspn (const char *__s, const char *__reject) ; extern size_t strspn (const char *__s, const char *__accept) ; extern char *strpbrk (const char *__s, const char *__accept) ; extern char *strstr (const char *__haystack, const char *__needle) ; extern char *strtok (char * __s, const char * __delim) ; extern char *__strtok_r (char * __s, const char * __delim, char ** __save_ptr) ; extern char *strtok_r (char * __s, const char * __delim, char ** __save_ptr) ; #line 238 "/usr/include/string.h" extern size_t strlen (const char *__s) ; #line 252 "/usr/include/string.h" extern char *strerror (int __errnum) ; extern int __xpg_strerror_r (int __errnum, char *__buf, size_t __buflen) ; #line 285 "/usr/include/string.h" extern void __bzero (void *__s, size_t __n) ; extern void bcopy (const void *__src, void *__dest, size_t __n) ; extern void bzero (void *__s, size_t __n) ; extern int bcmp (const void *__s1, const void *__s2, size_t __n) ; extern char *index (const char *__s, int __c) ; extern char *rindex (const char *__s, int __c) ; extern int ffs (int __i) ; #line 329 "/usr/include/string.h" extern int strcasecmp (const char *__s1, const char *__s2) ; extern int strncasecmp (const char *__s1, const char *__s2, size_t __n) ; #line 350 "/usr/include/string.h" extern char *strsep (char ** __stringp, const char * __delim) ; #line 396 "/usr/include/string.h" #line 431 "/usr/include/string.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Source: #include "confdefs.h" #include "conffix.h" #include Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/stdlib.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/stdlib.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef int wchar_t; #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 34 "/usr/include/stdlib.h" #line 95 "/usr/include/stdlib.h" typedef struct { int quot; int rem; } div_t; typedef struct { long int quot; long int rem; } ldiv_t; typedef struct { long long int quot; long long int rem; } lldiv_t; extern size_t __ctype_get_mb_cur_max (void) ; extern double atof (const char *__nptr) ; extern int atoi (const char *__nptr) ; extern long int atol (const char *__nptr) ; extern long long int atoll (const char *__nptr) ; extern double strtod (const char * __nptr, char ** __endptr) ; extern float strtof (const char * __nptr, char ** __endptr) ; extern long double strtold (const char * __nptr, char ** __endptr) ; extern long int strtol (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long int strtoul (const char * __nptr, char ** __endptr, int __base) ; extern long long int strtoq (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long long int strtouq (const char * __nptr, char ** __endptr, int __base) ; extern long long int strtoll (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long long int strtoull (const char * __nptr, char ** __endptr, int __base) ; #line 274 "/usr/include/stdlib.h" #line 305 "/usr/include/stdlib.h" extern char *l64a (long int __n) ; extern long int a64l (const char *__s) ; #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; typedef char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 321 "/usr/include/stdlib.h" extern long int random (void) ; extern void srandom (unsigned int __seed) ; extern char *initstate (unsigned int __seed, char *__statebuf, size_t __statelen) ; extern char *setstate (char *__statebuf) ; struct random_data { int32_t *fptr; int32_t *rptr; int32_t *state; int rand_type; int rand_deg; int rand_sep; int32_t *end_ptr; }; extern int random_r (struct random_data * __buf, int32_t * __result) ; extern int srandom_r (unsigned int __seed, struct random_data *__buf) ; extern int initstate_r (unsigned int __seed, char * __statebuf, size_t __statelen, struct random_data * __buf) ; extern int setstate_r (char * __statebuf, struct random_data * __buf) ; extern int rand (void) ; extern void srand (unsigned int __seed) ; extern int rand_r (unsigned int *__seed) ; extern double drand48 (void) ; extern double erand48 (unsigned short int __xsubi[3]) ; extern long int lrand48 (void) ; extern long int nrand48 (unsigned short int __xsubi[3]) ; extern long int mrand48 (void) ; extern long int jrand48 (unsigned short int __xsubi[3]) ; extern void srand48 (long int __seedval) ; extern unsigned short int *seed48 (unsigned short int __seed16v[3]) ; extern void lcong48 (unsigned short int __param[7]) ; struct drand48_data { unsigned short int __x[3]; unsigned short int __old_x[3]; unsigned short int __c; unsigned short int __init; unsigned long long int __a; }; extern int drand48_r (struct drand48_data * __buffer, double * __result) ; extern int erand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, double * __result) ; extern int lrand48_r (struct drand48_data * __buffer, long int * __result) ; extern int nrand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, long int * __result) ; extern int mrand48_r (struct drand48_data * __buffer, long int * __result) ; extern int jrand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, long int * __result) ; extern int srand48_r (long int __seedval, struct drand48_data *__buffer) ; extern int seed48_r (unsigned short int __seed16v[3], struct drand48_data *__buffer) ; extern int lcong48_r (unsigned short int __param[7], struct drand48_data *__buffer) ; extern void *malloc (size_t __size) ; extern void *calloc (size_t __nmemb, size_t __size) ; extern void *realloc (void *__ptr, size_t __size) ; extern void free (void *__ptr) ; extern void cfree (void *__ptr) ; #line 1 "/usr/include/alloca.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/alloca.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 26 "/usr/include/alloca.h" extern void *alloca (size_t __size) ; #line 498 "/usr/include/stdlib.h" extern void *valloc (size_t __size) ; extern int posix_memalign (void **__memptr, size_t __alignment, size_t __size) ; extern void abort (void) ; extern int atexit (void (*__func) (void)) ; extern int on_exit (void (*__func) (int __status, void *__arg), void *__arg) ; extern void exit (int __status) ; extern void _Exit (int __status) ; extern char *getenv (const char *__name) ; extern char *__secure_getenv (const char *__name) ; extern int putenv (char *__string) ; extern int setenv (const char *__name, const char *__value, int __replace) ; extern int unsetenv (const char *__name) ; extern int clearenv (void) ; extern char *mktemp (char *__template) ; extern int mkstemp (char *__template) ; #line 607 "/usr/include/stdlib.h" extern char *mkdtemp (char *__template) ; #line 638 "/usr/include/stdlib.h" extern int system (const char *__command) ; #line 655 "/usr/include/stdlib.h" extern char *realpath (const char * __name, char * __resolved) ; typedef int (*__compar_fn_t) (const void *, const void *); extern void *bsearch (const void *__key, const void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; extern void qsort (void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; extern int abs (int __x) ; extern long int labs (long int __x) ; extern long long int llabs (long long int __x) ; extern div_t div (int __numer, int __denom) ; extern ldiv_t ldiv (long int __numer, long int __denom) ; extern lldiv_t lldiv (long long int __numer, long long int __denom) ; extern char *ecvt (double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *fcvt (double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *gcvt (double __value, int __ndigit, char *__buf) ; extern char *qecvt (long double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *qfcvt (long double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *qgcvt (long double __value, int __ndigit, char *__buf) ; extern int ecvt_r (double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int fcvt_r (double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int qecvt_r (long double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int qfcvt_r (long double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int mblen (const char *__s, size_t __n) ; extern int mbtowc (wchar_t * __pwc, const char * __s, size_t __n) ; extern int wctomb (char *__s, wchar_t __wchar) ; extern size_t mbstowcs (wchar_t * __pwcs, const char * __s, size_t __n) ; extern size_t wcstombs (char * __s, const wchar_t * __pwcs, size_t __n) ; extern int rpmatch (const char *__response) ; #line 820 "/usr/include/stdlib.h" extern int posix_openpt (int __oflag) ; #line 851 "/usr/include/stdlib.h" #line 862 "/usr/include/stdlib.h" extern int getloadavg (double __loadavg[], int __nelem) ; #line 879 "/usr/include/stdlib.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #define ISLOWER(c) ('a' <= (c) && (c) <= 'z') #define TOUPPER(c) (ISLOWER(c) ? 'A' + ((c) - 'a') : (c)) #define XOR(e, f) (((e) && !(f)) || (!(e) && (f))) int main() { int i; for(i = 0; i < 256; i++) if (XOR(islower(i), ISLOWER(i)) || toupper(i) != TOUPPER(i)) exit(2); exit(0); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest Defined "STDC_HEADERS" to "1" ================================================================================ TEST checkStat from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:138) TESTING: checkStat from config.headers(config/BuildSystem/config/headers.py:138) Checks whether stat file-mode macros are broken, and defines STAT_MACROS_BROKEN if they are Source: #include "confdefs.h" #include "conffix.h" #include #include #if defined(S_ISBLK) && defined(S_IFDIR) # if S_ISBLK (S_IFDIR) You lose. # endif #endif #if defined(S_ISBLK) && defined(S_IFCHR) # if S_ISBLK (S_IFCHR) You lose. # endif #endif #if defined(S_ISLNK) && defined(S_IFREG) # if S_ISLNK (S_IFREG) You lose. # endif #endif #if defined(S_ISSOCK) && defined(S_IFREG) # if S_ISSOCK (S_IFREG) You lose. # endif #endif Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; typedef char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 5 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/sys/stat.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/stat.h" #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 40 "/usr/include/sys/stat.h" #line 63 "/usr/include/sys/stat.h" #line 82 "/usr/include/sys/stat.h" #line 104 "/usr/include/sys/stat.h" #line 1 "/usr/include/bits/stat.h" struct stat { __dev_t st_dev; unsigned short int __pad1; __ino_t st_ino; __mode_t st_mode; __nlink_t st_nlink; __uid_t st_uid; __gid_t st_gid; __dev_t st_rdev; unsigned short int __pad2; __off_t st_size; __blksize_t st_blksize; __blkcnt_t st_blocks; struct timespec st_atim; struct timespec st_mtim; struct timespec st_ctim; #line 85 "/usr/include/bits/stat.h" unsigned long int __unused4; unsigned long int __unused5; }; #line 132 "/usr/include/bits/stat.h" #line 151 "/usr/include/bits/stat.h" #line 166 "/usr/include/bits/stat.h" #line 108 "/usr/include/sys/stat.h" #line 126 "/usr/include/sys/stat.h" #line 141 "/usr/include/sys/stat.h" extern int stat (const char * __file, struct stat * __buf) ; extern int fstat (int __fd, struct stat *__buf) ; #line 232 "/usr/include/sys/stat.h" #line 256 "/usr/include/sys/stat.h" extern int lstat (const char * __file, struct stat * __buf) ; #line 279 "/usr/include/sys/stat.h" extern int chmod (const char *__file, __mode_t __mode) ; extern int lchmod (const char *__file, __mode_t __mode) ; extern int fchmod (int __fd, __mode_t __mode) ; #line 304 "/usr/include/sys/stat.h" extern __mode_t umask (__mode_t __mask) ; extern int mkdir (const char *__path, __mode_t __mode) ; #line 328 "/usr/include/sys/stat.h" extern int mknod (const char *__path, __mode_t __mode, __dev_t __dev) ; #line 344 "/usr/include/sys/stat.h" extern int mkfifo (const char *__path, __mode_t __mode) ; #line 357 "/usr/include/sys/stat.h" #line 366 "/usr/include/sys/stat.h" #line 394 "/usr/include/sys/stat.h" extern int __fxstat (int __ver, int __fildes, struct stat *__stat_buf) ; extern int __xstat (int __ver, const char *__filename, struct stat *__stat_buf) ; extern int __lxstat (int __ver, const char *__filename, struct stat *__stat_buf) ; extern int __fxstatat (int __ver, int __fildes, const char *__filename, struct stat *__stat_buf, int __flag) ; #line 428 "/usr/include/sys/stat.h" #line 440 "/usr/include/sys/stat.h" extern int __xmknod (int __ver, const char *__path, __mode_t __mode, __dev_t *__dev) ; extern int __xmknodat (int __ver, int __fd, const char *__path, __mode_t __mode, __dev_t *__dev) ; #line 531 "/usr/include/sys/stat.h" #line 6 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" ================================================================================ TEST checkSysWait from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:173) TESTING: checkSysWait from config.headers(config/BuildSystem/config/headers.py:173) Check for POSIX.1 compatible sys/wait.h, and defines HAVE_SYS_WAIT_H if found Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #ifndef WEXITSTATUS #define WEXITSTATUS(stat_val) ((unsigned)(stat_val) >> 8) #endif #ifndef WIFEXITED #define WIFEXITED(stat_val) (((stat_val) & 255) == 0) #endif int main() { int s; wait (&s); s = WIFEXITED (s) ? WEXITSTATUS (s) : 1; ; return 0; } Defined "HAVE_SYS_WAIT_H" to "1" ================================================================================ TEST checkTime from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:195) TESTING: checkTime from config.headers(config/BuildSystem/config/headers.py:195) Checks if you can safely include both and , and if so defines TIME_WITH_SYS_TIME Checking for header: time.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 30 "/usr/include/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 40 "/usr/include/time.h" #line 1 "/usr/include/bits/time.h" #line 43 "/usr/include/bits/time.h" #line 44 "/usr/include/time.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 58 "/usr/include/time.h" typedef __clock_t clock_t; typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; struct timespec { __time_t tv_sec; long int tv_nsec; }; struct tm { int tm_sec; int tm_min; int tm_hour; int tm_mday; int tm_mon; int tm_year; int tm_wday; int tm_yday; int tm_isdst; long int tm_gmtoff; const char *tm_zone; }; struct itimerspec { struct timespec it_interval; struct timespec it_value; }; struct sigevent; typedef __pid_t pid_t; extern clock_t clock (void) ; extern time_t time (time_t *__timer) ; extern double difftime (time_t __time1, time_t __time0) ; extern time_t mktime (struct tm *__tp) ; extern size_t strftime (char * __s, size_t __maxsize, const char * __format, const struct tm * __tp) ; #line 212 "/usr/include/time.h" #line 227 "/usr/include/time.h" extern struct tm *gmtime (const time_t *__timer) ; extern struct tm *localtime (const time_t *__timer) ; extern struct tm *gmtime_r (const time_t * __timer, struct tm * __tp) ; extern struct tm *localtime_r (const time_t * __timer, struct tm * __tp) ; extern char *asctime (const struct tm *__tp) ; extern char *ctime (const time_t *__timer) ; extern char *asctime_r (const struct tm * __tp, char * __buf) ; extern char *ctime_r (const time_t * __timer, char * __buf) ; extern char *__tzname[2]; extern int __daylight; extern long int __timezone; extern char *tzname[2]; extern void tzset (void) ; extern int daylight; extern long int timezone; extern int stime (const time_t *__when) ; extern time_t timegm (struct tm *__tp) ; extern time_t timelocal (struct tm *__tp) ; extern int dysize (int __year) ; extern int nanosleep (const struct timespec *__requested_time, struct timespec *__remaining); extern int clock_getres (clockid_t __clock_id, struct timespec *__res) ; extern int clock_gettime (clockid_t __clock_id, struct timespec *__tp) ; extern int clock_settime (clockid_t __clock_id, const struct timespec *__tp) ; extern int clock_nanosleep (clockid_t __clock_id, int __flags, const struct timespec *__req, struct timespec *__rem); extern int clock_getcpuclockid (pid_t __pid, clockid_t *__clock_id) ; extern int timer_create (clockid_t __clock_id, struct sigevent * __evp, timer_t * __timerid) ; extern int timer_delete (timer_t __timerid) ; extern int timer_settime (timer_t __timerid, int __flags, const struct itimerspec * __value, struct itimerspec * __ovalue) ; extern int timer_gettime (timer_t __timerid, struct itimerspec *__value) ; extern int timer_getoverrun (timer_t __timerid) ; #line 400 "/usr/include/time.h" #line 415 "/usr/include/time.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_TIME_H" to "1" Checking for header: sys/time.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/sys/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 24 "/usr/include/sys/time.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 26 "/usr/include/sys/time.h" #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 28 "/usr/include/sys/time.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 30 "/usr/include/sys/time.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 32 "/usr/include/sys/time.h" #line 52 "/usr/include/sys/time.h" struct timezone { int tz_minuteswest; int tz_dsttime; }; typedef struct timezone * __timezone_ptr_t; extern int gettimeofday (struct timeval * __tv, __timezone_ptr_t __tz) ; extern int settimeofday (const struct timeval *__tv, const struct timezone *__tz) ; extern int adjtime (const struct timeval *__delta, struct timeval *__olddelta) ; enum __itimer_which { ITIMER_REAL = 0, ITIMER_VIRTUAL = 1, ITIMER_PROF = 2 }; struct itimerval { struct timeval it_interval; struct timeval it_value; }; typedef int __itimer_which_t; extern int getitimer (__itimer_which_t __which, struct itimerval *__value) ; extern int setitimer (__itimer_which_t __which, const struct itimerval * __new, struct itimerval * __old) ; extern int utimes (const char *__file, const struct timeval __tvp[2]) ; extern int lutimes (const char *__file, const struct timeval __tvp[2]) ; extern int futimes (int __fd, const struct timeval __tvp[2]) ; #line 159 "/usr/include/sys/time.h" #line 190 "/usr/include/sys/time.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_TIME_H" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include int main() { struct tm *tp = 0; if (tp); ; return 0; } Defined "TIME_WITH_SYS_TIME" to "1" ================================================================================ TEST checkMath from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:203) TESTING: checkMath from config.headers(config/BuildSystem/config/headers.py:203) Checks for the math headers and defines Checking for header: math.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/math.h" #line 1 "/usr/include/math.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 29 "/usr/include/math.h" #line 1 "/usr/include/bits/huge_val.h" #line 40 "/usr/include/bits/huge_val.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 42 "/usr/include/bits/huge_val.h" typedef union { unsigned char __c[8]; double __d; } __huge_val_t; #line 51 "/usr/include/bits/huge_val.h" static __huge_val_t __huge_val = { { 0x7f, 0xf0, 0, 0, 0, 0, 0, 0 } }; #line 35 "/usr/include/math.h" #line 1 "/usr/include/bits/huge_valf.h" #line 40 "/usr/include/bits/huge_valf.h" typedef union { unsigned char __c[4]; float __f; } __huge_valf_t; #line 49 "/usr/include/bits/huge_valf.h" static __huge_valf_t __huge_valf = { { 0x7f, 0x80, 0, 0 } }; #line 37 "/usr/include/math.h" #line 1 "/usr/include/bits/huge_vall.h" #line 34 "/usr/include/bits/huge_vall.h" typedef union { unsigned char __c[16]; long double __ld; } __huge_vall_t; #line 43 "/usr/include/bits/huge_vall.h" static __huge_vall_t __huge_vall = { { 0x7f, 0xff, 0,0,0,0,0,0,0,0,0,0,0,0,0,0 } }; #line 38 "/usr/include/math.h" #line 1 "/usr/include/bits/inf.h" #line 41 "/usr/include/math.h" #line 1 "/usr/include/bits/nan.h" #line 39 "/usr/include/bits/nan.h" #line 48 "/usr/include/bits/nan.h" static union { unsigned char __c[4]; float __d; } __nan_union = { { 0x7f, 0xc0, 0, 0 } }; #line 44 "/usr/include/math.h" #line 1 "/usr/include/bits/mathdef.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/mathdef.h" #line 47 "/usr/include/bits/mathdef.h" typedef double float_t; typedef double double_t; #line 48 "/usr/include/math.h" #line 66 "/usr/include/math.h" #line 1 "/usr/include/bits/mathcalls.h" extern double acos (double __x) ; extern double __acos (double __x) ; extern double asin (double __x) ; extern double __asin (double __x) ; extern double atan (double __x) ; extern double __atan (double __x) ; extern double atan2 (double __y, double __x) ; extern double __atan2 (double __y, double __x) ; extern double cos (double __x) ; extern double __cos (double __x) ; extern double sin (double __x) ; extern double __sin (double __x) ; extern double tan (double __x) ; extern double __tan (double __x) ; extern double cosh (double __x) ; extern double __cosh (double __x) ; extern double sinh (double __x) ; extern double __sinh (double __x) ; extern double tanh (double __x) ; extern double __tanh (double __x) ; extern double acosh (double __x) ; extern double __acosh (double __x) ; extern double asinh (double __x) ; extern double __asinh (double __x) ; extern double atanh (double __x) ; extern double __atanh (double __x) ; extern double exp (double __x) ; extern double __exp (double __x) ; extern double frexp (double __x, int *__exponent) ; extern double __frexp (double __x, int *__exponent) ; extern double ldexp (double __x, int __exponent) ; extern double __ldexp (double __x, int __exponent) ; extern double log (double __x) ; extern double __log (double __x) ; extern double log10 (double __x) ; extern double __log10 (double __x) ; extern double modf (double __x, double *__iptr) ; extern double __modf (double __x, double *__iptr) ; #line 125 "/usr/include/bits/mathcalls.h" extern double expm1 (double __x) ; extern double __expm1 (double __x) ; extern double log1p (double __x) ; extern double __log1p (double __x) ; extern double logb (double __x) ; extern double __logb (double __x) ; extern double exp2 (double __x) ; extern double __exp2 (double __x) ; extern double log2 (double __x) ; extern double __log2 (double __x) ; extern double pow (double __x, double __y) ; extern double __pow (double __x, double __y) ; extern double sqrt (double __x) ; extern double __sqrt (double __x) ; extern double hypot (double __x, double __y) ; extern double __hypot (double __x, double __y) ; extern double cbrt (double __x) ; extern double __cbrt (double __x) ; extern double ceil (double __x) ; extern double __ceil (double __x) ; extern double fabs (double __x) ; extern double __fabs (double __x) ; extern double floor (double __x) ; extern double __floor (double __x) ; extern double fmod (double __x, double __y) ; extern double __fmod (double __x, double __y) ; extern int __isinf (double __value) ; extern int __finite (double __value) ; extern int isinf (double __value) ; extern int finite (double __value) ; extern double drem (double __x, double __y) ; extern double __drem (double __x, double __y) ; extern double significand (double __x) ; extern double __significand (double __x) ; extern double copysign (double __x, double __y) ; extern double __copysign (double __x, double __y) ; extern double nan (const char *__tagb) ; extern double __nan (const char *__tagb) ; extern int __isnan (double __value) ; extern int isnan (double __value) ; extern double j0 (double) ; extern double __j0 (double) ; extern double j1 (double) ; extern double __j1 (double) ; extern double jn (int, double) ; extern double __jn (int, double) ; extern double y0 (double) ; extern double __y0 (double) ; extern double y1 (double) ; extern double __y1 (double) ; extern double yn (int, double) ; extern double __yn (int, double) ; extern double erf (double) ; extern double __erf (double) ; extern double erfc (double) ; extern double __erfc (double) ; extern double lgamma (double) ; extern double __lgamma (double) ; extern double tgamma (double) ; extern double __tgamma (double) ; extern double gamma (double) ; extern double __gamma (double) ; extern double lgamma_r (double, int *__signgamp) ; extern double __lgamma_r (double, int *__signgamp) ; extern double rint (double __x) ; extern double __rint (double __x) ; extern double nextafter (double __x, double __y) ; extern double __nextafter (double __x, double __y) ; extern double nexttoward (double __x, long double __y) ; extern double __nexttoward (double __x, long double __y) ; extern double remainder (double __x, double __y) ; extern double __remainder (double __x, double __y) ; extern double scalbn (double __x, int __n) ; extern double __scalbn (double __x, int __n) ; extern int ilogb (double __x) ; extern int __ilogb (double __x) ; extern double scalbln (double __x, long int __n) ; extern double __scalbln (double __x, long int __n) ; extern double nearbyint (double __x) ; extern double __nearbyint (double __x) ; extern double round (double __x) ; extern double __round (double __x) ; extern double trunc (double __x) ; extern double __trunc (double __x) ; extern double remquo (double __x, double __y, int *__quo) ; extern double __remquo (double __x, double __y, int *__quo) ; extern long int lrint (double __x) ; extern long int __lrint (double __x) ; extern long long int llrint (double __x) ; extern long long int __llrint (double __x) ; extern long int lround (double __x) ; extern long int __lround (double __x) ; extern long long int llround (double __x) ; extern long long int __llround (double __x) ; extern double fdim (double __x, double __y) ; extern double __fdim (double __x, double __y) ; extern double fmax (double __x, double __y) ; extern double __fmax (double __x, double __y) ; extern double fmin (double __x, double __y) ; extern double __fmin (double __x, double __y) ; extern int __fpclassify (double __value) ; extern int __signbit (double __value) ; extern double fma (double __x, double __y, double __z) ; extern double __fma (double __x, double __y, double __z) ; extern double scalb (double __x, double __n) ; extern double __scalb (double __x, double __n) ; #line 72 "/usr/include/math.h" #line 1 "/usr/include/bits/mathcalls.h" extern float acosf (float __x) ; extern float __acosf (float __x) ; extern float asinf (float __x) ; extern float __asinf (float __x) ; extern float atanf (float __x) ; extern float __atanf (float __x) ; extern float atan2f (float __y, float __x) ; extern float __atan2f (float __y, float __x) ; extern float cosf (float __x) ; extern float __cosf (float __x) ; extern float sinf (float __x) ; extern float __sinf (float __x) ; extern float tanf (float __x) ; extern float __tanf (float __x) ; extern float coshf (float __x) ; extern float __coshf (float __x) ; extern float sinhf (float __x) ; extern float __sinhf (float __x) ; extern float tanhf (float __x) ; extern float __tanhf (float __x) ; extern float acoshf (float __x) ; extern float __acoshf (float __x) ; extern float asinhf (float __x) ; extern float __asinhf (float __x) ; extern float atanhf (float __x) ; extern float __atanhf (float __x) ; extern float expf (float __x) ; extern float __expf (float __x) ; extern float frexpf (float __x, int *__exponent) ; extern float __frexpf (float __x, int *__exponent) ; extern float ldexpf (float __x, int __exponent) ; extern float __ldexpf (float __x, int __exponent) ; extern float logf (float __x) ; extern float __logf (float __x) ; extern float log10f (float __x) ; extern float __log10f (float __x) ; extern float modff (float __x, float *__iptr) ; extern float __modff (float __x, float *__iptr) ; #line 125 "/usr/include/bits/mathcalls.h" extern float expm1f (float __x) ; extern float __expm1f (float __x) ; extern float log1pf (float __x) ; extern float __log1pf (float __x) ; extern float logbf (float __x) ; extern float __logbf (float __x) ; extern float exp2f (float __x) ; extern float __exp2f (float __x) ; extern float log2f (float __x) ; extern float __log2f (float __x) ; extern float powf (float __x, float __y) ; extern float __powf (float __x, float __y) ; extern float sqrtf (float __x) ; extern float __sqrtf (float __x) ; extern float hypotf (float __x, float __y) ; extern float __hypotf (float __x, float __y) ; extern float cbrtf (float __x) ; extern float __cbrtf (float __x) ; extern float ceilf (float __x) ; extern float __ceilf (float __x) ; extern float fabsf (float __x) ; extern float __fabsf (float __x) ; extern float floorf (float __x) ; extern float __floorf (float __x) ; extern float fmodf (float __x, float __y) ; extern float __fmodf (float __x, float __y) ; extern int __isinff (float __value) ; extern int __finitef (float __value) ; extern int isinff (float __value) ; extern int finitef (float __value) ; extern float dremf (float __x, float __y) ; extern float __dremf (float __x, float __y) ; extern float significandf (float __x) ; extern float __significandf (float __x) ; extern float copysignf (float __x, float __y) ; extern float __copysignf (float __x, float __y) ; extern float nanf (const char *__tagb) ; extern float __nanf (const char *__tagb) ; extern int __isnanf (float __value) ; extern int isnanf (float __value) ; extern float j0f (float) ; extern float __j0f (float) ; extern float j1f (float) ; extern float __j1f (float) ; extern float jnf (int, float) ; extern float __jnf (int, float) ; extern float y0f (float) ; extern float __y0f (float) ; extern float y1f (float) ; extern float __y1f (float) ; extern float ynf (int, float) ; extern float __ynf (int, float) ; extern float erff (float) ; extern float __erff (float) ; extern float erfcf (float) ; extern float __erfcf (float) ; extern float lgammaf (float) ; extern float __lgammaf (float) ; extern float tgammaf (float) ; extern float __tgammaf (float) ; extern float gammaf (float) ; extern float __gammaf (float) ; extern float lgammaf_r (float, int *__signgamp) ; extern float __lgammaf_r (float, int *__signgamp) ; extern float rintf (float __x) ; extern float __rintf (float __x) ; extern float nextafterf (float __x, float __y) ; extern float __nextafterf (float __x, float __y) ; extern float nexttowardf (float __x, long double __y) ; extern float __nexttowardf (float __x, long double __y) ; extern float remainderf (float __x, float __y) ; extern float __remainderf (float __x, float __y) ; extern float scalbnf (float __x, int __n) ; extern float __scalbnf (float __x, int __n) ; extern int ilogbf (float __x) ; extern int __ilogbf (float __x) ; extern float scalblnf (float __x, long int __n) ; extern float __scalblnf (float __x, long int __n) ; extern float nearbyintf (float __x) ; extern float __nearbyintf (float __x) ; extern float roundf (float __x) ; extern float __roundf (float __x) ; extern float truncf (float __x) ; extern float __truncf (float __x) ; extern float remquof (float __x, float __y, int *__quo) ; extern float __remquof (float __x, float __y, int *__quo) ; extern long int lrintf (float __x) ; extern long int __lrintf (float __x) ; extern long long int llrintf (float __x) ; extern long long int __llrintf (float __x) ; extern long int lroundf (float __x) ; extern long int __lroundf (float __x) ; extern long long int llroundf (float __x) ; extern long long int __llroundf (float __x) ; extern float fdimf (float __x, float __y) ; extern float __fdimf (float __x, float __y) ; extern float fmaxf (float __x, float __y) ; extern float __fmaxf (float __x, float __y) ; extern float fminf (float __x, float __y) ; extern float __fminf (float __x, float __y) ; extern int __fpclassifyf (float __value) ; extern int __signbitf (float __value) ; extern float fmaf (float __x, float __y, float __z) ; extern float __fmaf (float __x, float __y, float __z) ; extern float scalbf (float __x, float __n) ; extern float __scalbf (float __x, float __n) ; #line 95 "/usr/include/math.h" #line 129 "/usr/include/math.h" #line 1 "/usr/include/bits/mathcalls.h" extern long double acosl (long double __x) ; extern long double __acosl (long double __x) ; extern long double asinl (long double __x) ; extern long double __asinl (long double __x) ; extern long double atanl (long double __x) ; extern long double __atanl (long double __x) ; extern long double atan2l (long double __y, long double __x) ; extern long double __atan2l (long double __y, long double __x) ; extern long double cosl (long double __x) ; extern long double __cosl (long double __x) ; extern long double sinl (long double __x) ; extern long double __sinl (long double __x) ; extern long double tanl (long double __x) ; extern long double __tanl (long double __x) ; extern long double coshl (long double __x) ; extern long double __coshl (long double __x) ; extern long double sinhl (long double __x) ; extern long double __sinhl (long double __x) ; extern long double tanhl (long double __x) ; extern long double __tanhl (long double __x) ; extern long double acoshl (long double __x) ; extern long double __acoshl (long double __x) ; extern long double asinhl (long double __x) ; extern long double __asinhl (long double __x) ; extern long double atanhl (long double __x) ; extern long double __atanhl (long double __x) ; extern long double expl (long double __x) ; extern long double __expl (long double __x) ; extern long double frexpl (long double __x, int *__exponent) ; extern long double __frexpl (long double __x, int *__exponent) ; extern long double ldexpl (long double __x, int __exponent) ; extern long double __ldexpl (long double __x, int __exponent) ; extern long double logl (long double __x) ; extern long double __logl (long double __x) ; extern long double log10l (long double __x) ; extern long double __log10l (long double __x) ; extern long double modfl (long double __x, long double *__iptr) ; extern long double __modfl (long double __x, long double *__iptr) ; #line 125 "/usr/include/bits/mathcalls.h" extern long double expm1l (long double __x) ; extern long double __expm1l (long double __x) ; extern long double log1pl (long double __x) ; extern long double __log1pl (long double __x) ; extern long double logbl (long double __x) ; extern long double __logbl (long double __x) ; extern long double exp2l (long double __x) ; extern long double __exp2l (long double __x) ; extern long double log2l (long double __x) ; extern long double __log2l (long double __x) ; extern long double powl (long double __x, long double __y) ; extern long double __powl (long double __x, long double __y) ; extern long double sqrtl (long double __x) ; extern long double __sqrtl (long double __x) ; extern long double hypotl (long double __x, long double __y) ; extern long double __hypotl (long double __x, long double __y) ; extern long double cbrtl (long double __x) ; extern long double __cbrtl (long double __x) ; extern long double ceill (long double __x) ; extern long double __ceill (long double __x) ; extern long double fabsl (long double __x) ; extern long double __fabsl (long double __x) ; extern long double floorl (long double __x) ; extern long double __floorl (long double __x) ; extern long double fmodl (long double __x, long double __y) ; extern long double __fmodl (long double __x, long double __y) ; extern int __isinfl (long double __value) ; extern int __finitel (long double __value) ; extern int isinfl (long double __value) ; extern int finitel (long double __value) ; extern long double dreml (long double __x, long double __y) ; extern long double __dreml (long double __x, long double __y) ; extern long double significandl (long double __x) ; extern long double __significandl (long double __x) ; extern long double copysignl (long double __x, long double __y) ; extern long double __copysignl (long double __x, long double __y) ; extern long double nanl (const char *__tagb) ; extern long double __nanl (const char *__tagb) ; extern int __isnanl (long double __value) ; extern int isnanl (long double __value) ; extern long double j0l (long double) ; extern long double __j0l (long double) ; extern long double j1l (long double) ; extern long double __j1l (long double) ; extern long double jnl (int, long double) ; extern long double __jnl (int, long double) ; extern long double y0l (long double) ; extern long double __y0l (long double) ; extern long double y1l (long double) ; extern long double __y1l (long double) ; extern long double ynl (int, long double) ; extern long double __ynl (int, long double) ; extern long double erfl (long double) ; extern long double __erfl (long double) ; extern long double erfcl (long double) ; extern long double __erfcl (long double) ; extern long double lgammal (long double) ; extern long double __lgammal (long double) ; extern long double tgammal (long double) ; extern long double __tgammal (long double) ; extern long double gammal (long double) ; extern long double __gammal (long double) ; extern long double lgammal_r (long double, int *__signgamp) ; extern long double __lgammal_r (long double, int *__signgamp) ; extern long double rintl (long double __x) ; extern long double __rintl (long double __x) ; extern long double nextafterl (long double __x, long double __y) ; extern long double __nextafterl (long double __x, long double __y) ; extern long double nexttowardl (long double __x, long double __y) ; extern long double __nexttowardl (long double __x, long double __y) ; extern long double remainderl (long double __x, long double __y) ; extern long double __remainderl (long double __x, long double __y) ; extern long double scalbnl (long double __x, int __n) ; extern long double __scalbnl (long double __x, int __n) ; extern int ilogbl (long double __x) ; extern int __ilogbl (long double __x) ; extern long double scalblnl (long double __x, long int __n) ; extern long double __scalblnl (long double __x, long int __n) ; extern long double nearbyintl (long double __x) ; extern long double __nearbyintl (long double __x) ; extern long double roundl (long double __x) ; extern long double __roundl (long double __x) ; extern long double truncl (long double __x) ; extern long double __truncl (long double __x) ; extern long double remquol (long double __x, long double __y, int *__quo) ; extern long double __remquol (long double __x, long double __y, int *__quo) ; extern long int lrintl (long double __x) ; extern long int __lrintl (long double __x) ; extern long long int llrintl (long double __x) ; extern long long int __llrintl (long double __x) ; extern long int lroundl (long double __x) ; extern long int __lroundl (long double __x) ; extern long long int llroundl (long double __x) ; extern long long int __llroundl (long double __x) ; extern long double fdiml (long double __x, long double __y) ; extern long double __fdiml (long double __x, long double __y) ; extern long double fmaxl (long double __x, long double __y) ; extern long double __fmaxl (long double __x, long double __y) ; extern long double fminl (long double __x, long double __y) ; extern long double __fminl (long double __x, long double __y) ; extern int __fpclassifyl (long double __value) ; extern int __signbitl (long double __value) ; extern long double fmal (long double __x, long double __y, long double __z) ; extern long double __fmal (long double __x, long double __y, long double __z) ; extern long double scalbl (long double __x, long double __n) ; extern long double __scalbl (long double __x, long double __n) ; #line 142 "/usr/include/math.h" extern int signgam; enum { FP_NAN, FP_INFINITE, FP_ZERO, FP_SUBNORMAL, FP_NORMAL }; #line 223 "/usr/include/math.h" #line 235 "/usr/include/math.h" #line 247 "/usr/include/math.h" #line 263 "/usr/include/math.h" #line 275 "/usr/include/math.h" typedef enum { _IEEE_ = -1, _SVID_, _XOPEN_, _POSIX_, _ISOC_ } _LIB_VERSION_TYPE; extern _LIB_VERSION_TYPE _LIB_VERSION; struct exception { int type; char *name; double arg1; double arg2; double retval; }; extern int matherr (struct exception *__exc); #line 334 "/usr/include/math.h" #line 346 "/usr/include/math.h" #line 364 "/usr/include/math.h" #line 383 "/usr/include/math.h" #line 406 "/usr/include/math.h" #line 422 "/usr/include/math.h" #line 430 "/usr/include/math.h" #line 438 "/usr/include/math.h" #line 446 "/usr/include/math.h" #line 454 "/usr/include/math.h" #line 462 "/usr/include/math.h" #line 3 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/math.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_MATH_H" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double pi = M_PI; if (pi); ; return 0; } Found math #defines, like M_PI ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/socket.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/sys/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/socket.h" #line 1 "/usr/include/sys/uio.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/sys/uio.h" #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; typedef char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 25 "/usr/include/sys/uio.h" #line 1 "/usr/include/bits/uio.h" struct iovec { void *iov_base; size_t iov_len; }; #line 30 "/usr/include/sys/uio.h" extern ssize_t readv (int __fd, const struct iovec *__iovec, int __count); extern ssize_t writev (int __fd, const struct iovec *__iovec, int __count); #line 29 "/usr/include/sys/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 31 "/usr/include/sys/socket.h" #line 1 "/usr/include/bits/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 31 "/usr/include/bits/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 7 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "/usr/include/bits/posix1_lim.h" #line 1 "/usr/include/bits/local_lim.h" #line 34 "/usr/include/bits/local_lim.h" #line 1 "/usr/include/linux/limits.h" #line 17 "/usr/include/linux/limits.h" #line 37 "/usr/include/bits/local_lim.h" #line 154 "/usr/include/bits/posix1_lim.h" #line 62 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "/usr/include/bits/posix2_lim.h" #line 87 "/usr/include/bits/posix2_lim.h" #line 66 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 33 "/usr/include/bits/socket.h" typedef __socklen_t socklen_t; enum __socket_type { SOCK_STREAM = 1, SOCK_DGRAM = 2, SOCK_RAW = 3, SOCK_RDM = 4, SOCK_SEQPACKET = 5, SOCK_PACKET = 10 }; #line 96 "/usr/include/bits/socket.h" #line 130 "/usr/include/bits/socket.h" #line 142 "/usr/include/bits/socket.h" #line 1 "/usr/include/bits/sockaddr.h" typedef unsigned short int sa_family_t; #line 148 "/usr/include/bits/socket.h" struct sockaddr { sa_family_t sa_family; char sa_data[14]; }; #line 166 "/usr/include/bits/socket.h" struct sockaddr_storage { sa_family_t ss_family; __uint64_t __ss_align; char __ss_padding[(128 - (2 * sizeof (__uint64_t)))]; }; enum { MSG_OOB = 0x01, MSG_PEEK = 0x02, MSG_DONTROUTE = 0x04, #line 189 "/usr/include/bits/socket.h" MSG_CTRUNC = 0x08, MSG_PROXY = 0x10, MSG_TRUNC = 0x20, MSG_DONTWAIT = 0x40, MSG_EOR = 0x80, MSG_WAITALL = 0x100, MSG_FIN = 0x200, MSG_SYN = 0x400, MSG_CONFIRM = 0x800, MSG_RST = 0x1000, MSG_ERRQUEUE = 0x2000, MSG_NOSIGNAL = 0x4000, MSG_MORE = 0x8000, MSG_CMSG_CLOEXEC = 0x40000000 }; struct msghdr { void *msg_name; socklen_t msg_namelen; struct iovec *msg_iov; size_t msg_iovlen; void *msg_control; size_t msg_controllen; int msg_flags; }; struct cmsghdr { size_t cmsg_len; int cmsg_level; int cmsg_type; unsigned char __cmsg_data []; }; #line 272 "/usr/include/bits/socket.h" extern struct cmsghdr *__cmsg_nxthdr (struct msghdr *__mhdr, struct cmsghdr *__cmsg) ; #line 297 "/usr/include/bits/socket.h" enum { SCM_RIGHTS = 0x01 , SCM_CREDENTIALS = 0x02 }; struct ucred { pid_t pid; uid_t uid; gid_t gid; }; #line 1 "/usr/include/asm/socket.h" #line 1 "/usr/include/asm-s64fx/socket.h" #line 1 "/usr/include/asm/sockios.h" #line 1 "/usr/include/asm-s64fx/sockios.h" #line 12 "/usr/include/asm-s64fx/sockios.h" #line 6 "/usr/include/asm/sockios.h" #line 6 "/usr/include/asm-s64fx/socket.h" #line 19 "/usr/include/asm-s64fx/socket.h" #line 26 "/usr/include/asm-s64fx/socket.h" #line 36 "/usr/include/asm-s64fx/socket.h" #line 6 "/usr/include/asm/socket.h" #line 321 "/usr/include/bits/socket.h" struct linger { int l_onoff; int l_linger; }; #line 37 "/usr/include/sys/socket.h" struct osockaddr { unsigned short int sa_family; unsigned char sa_data[14]; }; enum { SHUT_RD = 0, SHUT_WR, SHUT_RDWR }; #line 96 "/usr/include/sys/socket.h" extern int socket (int __domain, int __type, int __protocol) ; extern int socketpair (int __domain, int __type, int __protocol, int __fds[2]) ; extern int bind (int __fd, const struct sockaddr * __addr, socklen_t __len) ; extern int getsockname (int __fd, struct sockaddr * __addr, socklen_t * __len) ; extern int connect (int __fd, const struct sockaddr * __addr, socklen_t __len); extern int getpeername (int __fd, struct sockaddr * __addr, socklen_t * __len) ; extern ssize_t send (int __fd, const void *__buf, size_t __n, int __flags); extern ssize_t recv (int __fd, void *__buf, size_t __n, int __flags); extern ssize_t sendto (int __fd, const void *__buf, size_t __n, int __flags, const struct sockaddr * __addr, socklen_t __addr_len); extern ssize_t recvfrom (int __fd, void * __buf, size_t __n, int __flags, struct sockaddr * __addr, socklen_t * __addr_len); extern ssize_t sendmsg (int __fd, const struct msghdr *__message, int __flags); extern ssize_t recvmsg (int __fd, struct msghdr *__message, int __flags); extern int getsockopt (int __fd, int __level, int __optname, void * __optval, socklen_t * __optlen) ; extern int setsockopt (int __fd, int __level, int __optname, const void *__optval, socklen_t __optlen) ; extern int listen (int __fd, int __n) ; extern int accept (int __fd, struct sockaddr * __addr, socklen_t * __addr_len); extern int shutdown (int __fd, int __how) ; extern int sockatmark (int __fd) ; extern int isfdtype (int __fd, int __fdtype) ; #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_SOCKET_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/types.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; typedef char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_TYPES_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: malloc.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/malloc.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/malloc.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef long ptrdiff_t; #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef int wchar_t; #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 26 "/usr/include/malloc.h" #line 40 "/usr/include/malloc.h" extern void *malloc (size_t __size) ; extern void *calloc (size_t __nmemb, size_t __size) ; extern void *realloc (void *__ptr, size_t __size) ; extern void free (void *__ptr); extern void cfree (void *__ptr); extern void *memalign (size_t __alignment, size_t __size) ; extern void *valloc (size_t __size) ; extern void * pvalloc (size_t __size) ; extern void *(*__morecore) (ptrdiff_t __size); extern void *__default_morecore (ptrdiff_t __size) ; struct mallinfo { int arena; int ordblks; int smblks; int hblks; int hblkhd; int usmblks; int fsmblks; int uordblks; int fordblks; int keepcost; }; extern struct mallinfo mallinfo (void); #line 122 "/usr/include/malloc.h" #line 130 "/usr/include/malloc.h" extern int mallopt (int __param, int __val); extern int malloc_trim (size_t __pad); extern size_t malloc_usable_size (void *__ptr); extern void malloc_stats (void); extern void *malloc_get_state (void); extern int malloc_set_state (void *__ptr); extern void (*__malloc_initialize_hook) (void); extern void (*__free_hook) (void *__ptr, const void *); extern void *(*__malloc_hook) (size_t __size, const void *); extern void *(*__realloc_hook) (void *__ptr, size_t __size, const void *); extern void *(*__memalign_hook) (size_t __alignment, size_t __size, const void *); extern void (*__after_morecore_hook) (void); extern void __malloc_check_init (void); #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_MALLOC_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: time.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 30 "/usr/include/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 40 "/usr/include/time.h" #line 1 "/usr/include/bits/time.h" #line 43 "/usr/include/bits/time.h" #line 44 "/usr/include/time.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 58 "/usr/include/time.h" typedef __clock_t clock_t; typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; struct timespec { __time_t tv_sec; long int tv_nsec; }; struct tm { int tm_sec; int tm_min; int tm_hour; int tm_mday; int tm_mon; int tm_year; int tm_wday; int tm_yday; int tm_isdst; long int tm_gmtoff; const char *tm_zone; }; struct itimerspec { struct timespec it_interval; struct timespec it_value; }; struct sigevent; typedef __pid_t pid_t; extern clock_t clock (void) ; extern time_t time (time_t *__timer) ; extern double difftime (time_t __time1, time_t __time0) ; extern time_t mktime (struct tm *__tp) ; extern size_t strftime (char * __s, size_t __maxsize, const char * __format, const struct tm * __tp) ; #line 212 "/usr/include/time.h" #line 227 "/usr/include/time.h" extern struct tm *gmtime (const time_t *__timer) ; extern struct tm *localtime (const time_t *__timer) ; extern struct tm *gmtime_r (const time_t * __timer, struct tm * __tp) ; extern struct tm *localtime_r (const time_t * __timer, struct tm * __tp) ; extern char *asctime (const struct tm *__tp) ; extern char *ctime (const time_t *__timer) ; extern char *asctime_r (const struct tm * __tp, char * __buf) ; extern char *ctime_r (const time_t * __timer, char * __buf) ; extern char *__tzname[2]; extern int __daylight; extern long int __timezone; extern char *tzname[2]; extern void tzset (void) ; extern int daylight; extern long int timezone; extern int stime (const time_t *__when) ; extern time_t timegm (struct tm *__tp) ; extern time_t timelocal (struct tm *__tp) ; extern int dysize (int __year) ; extern int nanosleep (const struct timespec *__requested_time, struct timespec *__remaining); extern int clock_getres (clockid_t __clock_id, struct timespec *__res) ; extern int clock_gettime (clockid_t __clock_id, struct timespec *__tp) ; extern int clock_settime (clockid_t __clock_id, const struct timespec *__tp) ; extern int clock_nanosleep (clockid_t __clock_id, int __flags, const struct timespec *__req, struct timespec *__rem); extern int clock_getcpuclockid (pid_t __pid, clockid_t *__clock_id) ; extern int timer_create (clockid_t __clock_id, struct sigevent * __evp, timer_t * __timerid) ; extern int timer_delete (timer_t __timerid) ; extern int timer_settime (timer_t __timerid, int __flags, const struct itimerspec * __value, struct itimerspec * __ovalue) ; extern int timer_gettime (timer_t __timerid, struct itimerspec *__value) ; extern int timer_getoverrun (timer_t __timerid) ; #line 400 "/usr/include/time.h" #line 415 "/usr/include/time.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_TIME_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: Direct.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "Direct.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "Direct.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "Direct.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c".: ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: Ws2tcpip.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "Ws2tcpip.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "Ws2tcpip.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "Ws2tcpip.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c".: ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: endian.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_ENDIAN_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: ieeefp.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "ieeefp.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "ieeefp.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "ieeefp.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c".: ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: strings.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/strings.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/strings.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 30 "/usr/include/strings.h" extern int bcmp (const void *__s1, const void *__s2, size_t __n) ; extern void bcopy (const void *__src, void *__dest, size_t __n) ; extern void bzero (void *__s, size_t __n) ; extern int ffs (int __i) ; extern char *index (const char *__s, int __c) ; extern char *rindex (const char *__s, int __c) ; extern int strcasecmp (const char *__s1, const char *__s2) ; extern int strncasecmp (const char *__s1, const char *__s2, size_t __n) ; #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_STRINGS_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sched.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/sched.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 24 "/usr/include/sched.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 27 "/usr/include/sched.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 30 "/usr/include/sched.h" #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 33 "/usr/include/sched.h" #line 1 "/usr/include/bits/sched.h" #line 36 "/usr/include/bits/sched.h" #line 64 "/usr/include/bits/sched.h" struct sched_param { int __sched_priority; }; extern int clone (int (*__fn) (void *__arg), void *__child_stack, int __flags, void *__arg, ...) ; extern int unshare (int __flags) ; extern int sched_getcpu (void) ; struct __sched_param { int __sched_priority; }; typedef unsigned long int __cpu_mask; typedef struct { __cpu_mask __bits[1024 / (8 * sizeof (__cpu_mask))]; } cpu_set_t; #line 146 "/usr/include/bits/sched.h" #line 164 "/usr/include/bits/sched.h" #line 174 "/usr/include/bits/sched.h" extern int __sched_cpucount (size_t __setsize, const cpu_set_t *__setp) ; extern cpu_set_t *__sched_cpualloc (size_t __count) ; extern void __sched_cpufree (cpu_set_t *__set) ; #line 36 "/usr/include/sched.h" extern int sched_setparam (__pid_t __pid, const struct sched_param *__param) ; extern int sched_getparam (__pid_t __pid, struct sched_param *__param) ; extern int sched_setscheduler (__pid_t __pid, int __policy, const struct sched_param *__param) ; extern int sched_getscheduler (__pid_t __pid) ; extern int sched_yield (void) ; extern int sched_get_priority_max (int __algorithm) ; extern int sched_get_priority_min (int __algorithm) ; extern int sched_rr_get_interval (__pid_t __pid, struct timespec *__t) ; #line 117 "/usr/include/sched.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SCHED_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: cxxabi.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "cxxabi.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "cxxabi.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "cxxabi.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c".: ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/systeminfo.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "sys/systeminfo.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "sys/systeminfo.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "sys/systeminfo.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c".: ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: dos.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "dos.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "dos.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "dos.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c".: ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: WindowsX.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "WindowsX.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "WindowsX.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "WindowsX.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c".: ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/sysinfo.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/sys/sysinfo.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/sys/sysinfo.h" #line 1 "/usr/include/linux/kernel.h" struct sysinfo { long uptime; unsigned long loads[3]; unsigned long totalram; unsigned long freeram; unsigned long sharedram; unsigned long bufferram; unsigned long totalswap; unsigned long freeswap; unsigned short procs; unsigned short pad; unsigned long totalhigh; unsigned long freehigh; unsigned int mem_unit; char _f[20-2*sizeof(long)-sizeof(int)]; }; #line 26 "/usr/include/sys/sysinfo.h" extern int sysinfo (struct sysinfo *__info) ; extern int get_nprocs_conf (void) ; extern int get_nprocs (void) ; extern long int get_phys_pages (void) ; extern long int get_avphys_pages (void) ; #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_SYSINFO_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/wait.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/sys/wait.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/wait.h" #line 1 "/usr/include/signal.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 30 "/usr/include/signal.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 100 "/usr/include/bits/sigset.h" extern int __sigismember (const __sigset_t *, int); extern int __sigaddset (__sigset_t *, int); extern int __sigdelset (__sigset_t *, int); #line 124 "/usr/include/bits/sigset.h" #line 34 "/usr/include/signal.h" typedef __sig_atomic_t sig_atomic_t; typedef __sigset_t sigset_t; #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 58 "/usr/include/signal.h" #line 1 "/usr/include/bits/signum.h" #line 52 "/usr/include/bits/signum.h" #line 72 "/usr/include/bits/signum.h" #line 59 "/usr/include/signal.h" typedef __pid_t pid_t; typedef __uid_t uid_t; typedef void (*__sighandler_t) (int); extern __sighandler_t __sysv_signal (int __sig, __sighandler_t __handler) ; extern __sighandler_t signal (int __sig, __sighandler_t __handler) ; #line 104 "/usr/include/signal.h" #line 112 "/usr/include/signal.h" extern int kill (__pid_t __pid, int __sig) ; extern int killpg (__pid_t __pgrp, int __sig) ; extern int raise (int __sig) ; extern __sighandler_t ssignal (int __sig, __sighandler_t __handler) ; extern int gsignal (int __sig) ; extern void psignal (int __sig, const char *__s); extern int __sigpause (int __sig_or_mask, int __is_sig); #line 169 "/usr/include/signal.h" extern int sigblock (int __mask) ; extern int sigsetmask (int __mask) ; extern int siggetmask (void) ; typedef __sighandler_t sig_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 210 "/usr/include/signal.h" #line 1 "/usr/include/bits/siginfo.h" #line 1 "/usr/include/bits/wordsize.h" #line 26 "/usr/include/bits/siginfo.h" typedef union sigval { int sival_int; void *sival_ptr; } sigval_t; #line 50 "/usr/include/bits/siginfo.h" typedef struct siginfo { int si_signo; int si_errno; int si_code; union { int _pad[((128 / sizeof (int)) - 4)]; struct { __pid_t si_pid; __uid_t si_uid; } _kill; struct { int si_tid; int si_overrun; sigval_t si_sigval; } _timer; struct { __pid_t si_pid; __uid_t si_uid; sigval_t si_sigval; } _rt; struct { __pid_t si_pid; __uid_t si_uid; int si_status; __clock_t si_utime; __clock_t si_stime; } _sigchld; struct { void *si_addr; int si_trapno; } _sigfault; struct { int si_band; int si_fd; } _sigpoll; } _sifields; } siginfo_t; #line 127 "/usr/include/bits/siginfo.h" enum { SI_ASYNCNL = -60, SI_TKILL = -6, SI_SIGIO, SI_ASYNCIO, SI_MESGQ, SI_TIMER, SI_QUEUE, SI_USER, SI_KERNEL = 0x80 }; enum { ILL_ILLOPC = 1, ILL_ILLOPN, ILL_ILLADR, ILL_ILLTRP, ILL_PRVOPC, ILL_PRVREG, ILL_COPROC, ILL_BADSTK }; enum { FPE_INTDIV = 1, FPE_INTOVF, FPE_FLTDIV, FPE_FLTOVF, FPE_FLTUND, FPE_FLTRES, FPE_FLTINV, FPE_FLTSUB }; enum { SEGV_MAPERR = 1, SEGV_ACCERR }; enum { BUS_ADRALN = 1, BUS_ADRERR, BUS_OBJERR }; enum { TRAP_BRKPT = 1, TRAP_TRACE }; enum { CLD_EXITED = 1, CLD_KILLED, CLD_DUMPED, CLD_TRAPPED, CLD_STOPPED, CLD_CONTINUED }; enum { POLL_IN = 1, POLL_OUT, POLL_MSG, POLL_ERR, POLL_PRI, POLL_HUP }; enum { EMT_TAGOVF = 1 }; #line 281 "/usr/include/bits/siginfo.h" typedef struct sigevent { sigval_t sigev_value; int sigev_signo; int sigev_notify; union { int _pad[((64 / sizeof (int)) - 4)]; struct { void (*_function) (sigval_t); void *_attribute; } _sigev_thread; } _sigev_un; } sigevent_t; enum { SIGEV_SIGNAL = 0, SIGEV_NONE, SIGEV_THREAD, SIGEV_THREAD_ID = 4 }; #line 213 "/usr/include/signal.h" extern int sigemptyset (sigset_t *__set) ; extern int sigfillset (sigset_t *__set) ; extern int sigaddset (sigset_t *__set, int __signo) ; extern int sigdelset (sigset_t *__set, int __signo) ; extern int sigismember (const sigset_t *__set, int __signo) ; #line 243 "/usr/include/signal.h" #line 1 "/usr/include/bits/sigaction.h" struct sigaction { union { __sighandler_t sa_handler; void (*sa_sigaction) (int, siginfo_t *, void *); } __sigaction_handler; __sigset_t sa_mask; unsigned long sa_flags; void (*sa_restorer) (void); }; #line 66 "/usr/include/bits/sigaction.h" #line 247 "/usr/include/signal.h" extern int sigprocmask (int __how, const sigset_t * __set, sigset_t * __oset) ; extern int sigsuspend (const sigset_t *__set) ; extern int sigaction (int __sig, const struct sigaction * __act, struct sigaction * __oact) ; extern int sigpending (sigset_t *__set) ; extern int sigwait (const sigset_t * __set, int * __sig) ; extern int sigwaitinfo (const sigset_t * __set, siginfo_t * __info) ; extern int sigtimedwait (const sigset_t * __set, siginfo_t * __info, const struct timespec * __timeout) ; extern int sigqueue (__pid_t __pid, int __sig, const union sigval __val) ; extern const char *const _sys_siglist[65]; extern const char *const sys_siglist[65]; struct sigvec { __sighandler_t sv_handler; int sv_mask; int sv_flags; }; extern int sigvec (int __sig, const struct sigvec *__vec, struct sigvec *__ovec) ; #line 1 "/usr/include/bits/sigcontext.h" #line 1 "/usr/include/bits/wordsize.h" #line 24 "/usr/include/bits/sigcontext.h" #line 1 "/usr/include/stdint.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/stdint.h" #line 1 "/usr/include/bits/wchar.h" #line 28 "/usr/include/stdint.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/stdint.h" typedef signed char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char uint8_t; typedef unsigned short int uint16_t; typedef unsigned int uint32_t; typedef unsigned long int uint64_t; typedef signed char int_least8_t; typedef short int int_least16_t; typedef int int_least32_t; typedef long int int_least64_t; typedef unsigned char uint_least8_t; typedef unsigned short int uint_least16_t; typedef unsigned int uint_least32_t; typedef unsigned long int uint_least64_t; typedef signed char int_fast8_t; typedef long int int_fast16_t; typedef long int int_fast32_t; typedef long int int_fast64_t; #line 102 "/usr/include/stdint.h" typedef unsigned char uint_fast8_t; typedef unsigned long int uint_fast16_t; typedef unsigned long int uint_fast32_t; typedef unsigned long int uint_fast64_t; #line 115 "/usr/include/stdint.h" typedef long int intptr_t; typedef unsigned long int uintptr_t; #line 131 "/usr/include/stdint.h" typedef long int intmax_t; typedef unsigned long int uintmax_t; #line 143 "/usr/include/stdint.h" #line 156 "/usr/include/stdint.h" #line 205 "/usr/include/stdint.h" #line 215 "/usr/include/stdint.h" #line 226 "/usr/include/stdint.h" #line 238 "/usr/include/stdint.h" #line 259 "/usr/include/stdint.h" #line 298 "/usr/include/stdint.h" #line 308 "/usr/include/stdint.h" #line 317 "/usr/include/stdint.h" #line 25 "/usr/include/bits/sigcontext.h" #line 48 "/usr/include/bits/sigcontext.h" typedef struct { unsigned int si_float_regs [64]; unsigned long si_fsr; unsigned long si_gsr; unsigned long si_fprs; uint64_t si_xglob_regs[32]; uint32_t si_xfloat_regs[448]; uint64_t si_xasr; } __siginfo_fpu_t; struct sigcontext { char sigc_info[128]; struct { unsigned long u_regs[16]; unsigned long tstate; unsigned long tpc; unsigned long tnpc; unsigned int y; unsigned int fprs; } sigc_regs; __siginfo_fpu_t * sigc_fpu_save; uint64_t si_txar; uint64_t si_sccr; struct { void * ss_sp; int ss_flags; unsigned long ss_size; } sigc_stack; unsigned long sigc_mask; }; #line 334 "/usr/include/signal.h" extern int sigreturn (struct sigcontext *__scp) ; #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 344 "/usr/include/signal.h" extern int siginterrupt (int __sig, int __interrupt) ; #line 1 "/usr/include/bits/sigstack.h" struct sigstack { void *ss_sp; int ss_onstack; }; enum { SS_ONSTACK = 1, SS_DISABLE }; typedef struct sigaltstack { void *ss_sp; int ss_flags; size_t ss_size; } stack_t; #line 351 "/usr/include/signal.h" extern int sigstack (struct sigstack *__ss, struct sigstack *__oss) ; extern int sigaltstack (const struct sigaltstack * __ss, struct sigaltstack * __oss) ; #line 384 "/usr/include/signal.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 389 "/usr/include/signal.h" #line 1 "/usr/include/bits/sigthread.h" extern int pthread_sigmask (int __how, const __sigset_t * __newmask, __sigset_t * __oldmask); extern int pthread_kill (pthread_t __threadid, int __signo) ; #line 390 "/usr/include/signal.h" extern int __libc_current_sigrtmin (void) ; extern int __libc_current_sigrtmax (void) ; #line 32 "/usr/include/sys/wait.h" #line 1 "/usr/include/sys/resource.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/sys/resource.h" #line 1 "/usr/include/bits/resource.h" enum __rlimit_resource { RLIMIT_CPU = 0, RLIMIT_FSIZE = 1, RLIMIT_DATA = 2, RLIMIT_STACK = 3, RLIMIT_CORE = 4, __RLIMIT_RSS = 5, RLIMIT_NOFILE = 6, __RLIMIT_OFILE = RLIMIT_NOFILE, RLIMIT_AS = 9, __RLIMIT_NPROC = 7, __RLIMIT_MEMLOCK = 8, __RLIMIT_LOCKS = 10, __RLIMIT_SIGPENDING = 11, __RLIMIT_MSGQUEUE = 12, __RLIMIT_NICE = 13, __RLIMIT_RTPRIO = 14, __RLIMIT_NLIMITS = 15, __RLIM_NLIMITS = __RLIMIT_NLIMITS }; #line 135 "/usr/include/bits/resource.h" typedef __rlim_t rlim_t; #line 150 "/usr/include/bits/resource.h" struct rlimit { rlim_t rlim_cur; rlim_t rlim_max; }; #line 168 "/usr/include/bits/resource.h" enum __rusage_who { RUSAGE_SELF = 0, RUSAGE_CHILDREN = -1 }; #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 183 "/usr/include/bits/resource.h" struct rusage { struct timeval ru_utime; struct timeval ru_stime; long int ru_maxrss; long int ru_ixrss; long int ru_idrss; long int ru_isrss; long int ru_minflt; long int ru_majflt; long int ru_nswap; long int ru_inblock; long int ru_oublock; long int ru_msgsnd; long int ru_msgrcv; long int ru_nsignals; long int ru_nvcsw; long int ru_nivcsw; }; enum __priority_which { PRIO_PROCESS = 0, PRIO_PGRP = 1, PRIO_USER = 2 }; #line 26 "/usr/include/sys/resource.h" typedef __id_t id_t; typedef int __rlimit_resource_t; typedef int __rusage_who_t; typedef int __priority_which_t; extern int getrlimit (__rlimit_resource_t __resource, struct rlimit *__rlimits) ; #line 65 "/usr/include/sys/resource.h" extern int setrlimit (__rlimit_resource_t __resource, const struct rlimit *__rlimits) ; #line 85 "/usr/include/sys/resource.h" extern int getrusage (__rusage_who_t __who, struct rusage *__usage) ; extern int getpriority (__priority_which_t __which, id_t __who) ; extern int setpriority (__priority_which_t __which, id_t __who, int __prio) ; #line 33 "/usr/include/sys/wait.h" #line 1 "/usr/include/bits/waitflags.h" #line 39 "/usr/include/sys/wait.h" #line 52 "/usr/include/sys/wait.h" #line 70 "/usr/include/sys/wait.h" #line 78 "/usr/include/sys/wait.h" #line 1 "/usr/include/bits/waitstatus.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 66 "/usr/include/bits/waitstatus.h" union wait { int w_status; struct { #line 79 "/usr/include/bits/waitstatus.h" unsigned int:16; unsigned int __w_retcode:8; unsigned int __w_coredump:1; unsigned int __w_termsig:7; } __wait_terminated; struct { #line 93 "/usr/include/bits/waitstatus.h" unsigned int:16; unsigned int __w_stopsig:8; unsigned int __w_stopval:8; } __wait_stopped; }; #line 81 "/usr/include/sys/wait.h" #line 92 "/usr/include/sys/wait.h" #line 99 "/usr/include/sys/wait.h" typedef enum { P_ALL, P_PID, P_PGID } idtype_t; extern __pid_t wait (void * __stat_loc); extern __pid_t waitpid (__pid_t __pid, int *__stat_loc, int __options); #line 1 "/usr/include/bits/siginfo.h" #line 1 "/usr/include/bits/wordsize.h" #line 26 "/usr/include/bits/siginfo.h" #line 39 "/usr/include/bits/siginfo.h" #line 268 "/usr/include/bits/siginfo.h" #line 144 "/usr/include/sys/wait.h" extern int waitid (idtype_t __idtype, __id_t __id, siginfo_t *__infop, int __options); struct rusage; extern __pid_t wait3 (void * __stat_loc, int __options, struct rusage * __usage) ; extern __pid_t wait4 (__pid_t __pid, void * __stat_loc, int __options, struct rusage *__usage) ; #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_WAIT_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: stdlib.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/stdlib.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/stdlib.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef int wchar_t; #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 34 "/usr/include/stdlib.h" #line 95 "/usr/include/stdlib.h" typedef struct { int quot; int rem; } div_t; typedef struct { long int quot; long int rem; } ldiv_t; typedef struct { long long int quot; long long int rem; } lldiv_t; extern size_t __ctype_get_mb_cur_max (void) ; extern double atof (const char *__nptr) ; extern int atoi (const char *__nptr) ; extern long int atol (const char *__nptr) ; extern long long int atoll (const char *__nptr) ; extern double strtod (const char * __nptr, char ** __endptr) ; extern float strtof (const char * __nptr, char ** __endptr) ; extern long double strtold (const char * __nptr, char ** __endptr) ; extern long int strtol (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long int strtoul (const char * __nptr, char ** __endptr, int __base) ; extern long long int strtoq (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long long int strtouq (const char * __nptr, char ** __endptr, int __base) ; extern long long int strtoll (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long long int strtoull (const char * __nptr, char ** __endptr, int __base) ; #line 274 "/usr/include/stdlib.h" #line 305 "/usr/include/stdlib.h" extern char *l64a (long int __n) ; extern long int a64l (const char *__s) ; #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; typedef char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 321 "/usr/include/stdlib.h" extern long int random (void) ; extern void srandom (unsigned int __seed) ; extern char *initstate (unsigned int __seed, char *__statebuf, size_t __statelen) ; extern char *setstate (char *__statebuf) ; struct random_data { int32_t *fptr; int32_t *rptr; int32_t *state; int rand_type; int rand_deg; int rand_sep; int32_t *end_ptr; }; extern int random_r (struct random_data * __buf, int32_t * __result) ; extern int srandom_r (unsigned int __seed, struct random_data *__buf) ; extern int initstate_r (unsigned int __seed, char * __statebuf, size_t __statelen, struct random_data * __buf) ; extern int setstate_r (char * __statebuf, struct random_data * __buf) ; extern int rand (void) ; extern void srand (unsigned int __seed) ; extern int rand_r (unsigned int *__seed) ; extern double drand48 (void) ; extern double erand48 (unsigned short int __xsubi[3]) ; extern long int lrand48 (void) ; extern long int nrand48 (unsigned short int __xsubi[3]) ; extern long int mrand48 (void) ; extern long int jrand48 (unsigned short int __xsubi[3]) ; extern void srand48 (long int __seedval) ; extern unsigned short int *seed48 (unsigned short int __seed16v[3]) ; extern void lcong48 (unsigned short int __param[7]) ; struct drand48_data { unsigned short int __x[3]; unsigned short int __old_x[3]; unsigned short int __c; unsigned short int __init; unsigned long long int __a; }; extern int drand48_r (struct drand48_data * __buffer, double * __result) ; extern int erand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, double * __result) ; extern int lrand48_r (struct drand48_data * __buffer, long int * __result) ; extern int nrand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, long int * __result) ; extern int mrand48_r (struct drand48_data * __buffer, long int * __result) ; extern int jrand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, long int * __result) ; extern int srand48_r (long int __seedval, struct drand48_data *__buffer) ; extern int seed48_r (unsigned short int __seed16v[3], struct drand48_data *__buffer) ; extern int lcong48_r (unsigned short int __param[7], struct drand48_data *__buffer) ; extern void *malloc (size_t __size) ; extern void *calloc (size_t __nmemb, size_t __size) ; extern void *realloc (void *__ptr, size_t __size) ; extern void free (void *__ptr) ; extern void cfree (void *__ptr) ; #line 1 "/usr/include/alloca.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/alloca.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 26 "/usr/include/alloca.h" extern void *alloca (size_t __size) ; #line 498 "/usr/include/stdlib.h" extern void *valloc (size_t __size) ; extern int posix_memalign (void **__memptr, size_t __alignment, size_t __size) ; extern void abort (void) ; extern int atexit (void (*__func) (void)) ; extern int on_exit (void (*__func) (int __status, void *__arg), void *__arg) ; extern void exit (int __status) ; extern void _Exit (int __status) ; extern char *getenv (const char *__name) ; extern char *__secure_getenv (const char *__name) ; extern int putenv (char *__string) ; extern int setenv (const char *__name, const char *__value, int __replace) ; extern int unsetenv (const char *__name) ; extern int clearenv (void) ; extern char *mktemp (char *__template) ; extern int mkstemp (char *__template) ; #line 607 "/usr/include/stdlib.h" extern char *mkdtemp (char *__template) ; #line 638 "/usr/include/stdlib.h" extern int system (const char *__command) ; #line 655 "/usr/include/stdlib.h" extern char *realpath (const char * __name, char * __resolved) ; typedef int (*__compar_fn_t) (const void *, const void *); extern void *bsearch (const void *__key, const void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; extern void qsort (void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; extern int abs (int __x) ; extern long int labs (long int __x) ; extern long long int llabs (long long int __x) ; extern div_t div (int __numer, int __denom) ; extern ldiv_t ldiv (long int __numer, long int __denom) ; extern lldiv_t lldiv (long long int __numer, long long int __denom) ; extern char *ecvt (double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *fcvt (double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *gcvt (double __value, int __ndigit, char *__buf) ; extern char *qecvt (long double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *qfcvt (long double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *qgcvt (long double __value, int __ndigit, char *__buf) ; extern int ecvt_r (double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int fcvt_r (double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int qecvt_r (long double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int qfcvt_r (long double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int mblen (const char *__s, size_t __n) ; extern int mbtowc (wchar_t * __pwc, const char * __s, size_t __n) ; extern int wctomb (char *__s, wchar_t __wchar) ; extern size_t mbstowcs (wchar_t * __pwcs, const char * __s, size_t __n) ; extern size_t wcstombs (char * __s, const wchar_t * __pwcs, size_t __n) ; extern int rpmatch (const char *__response) ; #line 820 "/usr/include/stdlib.h" extern int posix_openpt (int __oflag) ; #line 851 "/usr/include/stdlib.h" #line 862 "/usr/include/stdlib.h" extern int getloadavg (double __loadavg[], int __nelem) ; #line 879 "/usr/include/stdlib.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_STDLIB_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: pthread.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/pthread.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 24 "/usr/include/pthread.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 25 "/usr/include/pthread.h" #line 1 "/usr/include/sched.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 24 "/usr/include/sched.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 27 "/usr/include/sched.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 30 "/usr/include/sched.h" #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 33 "/usr/include/sched.h" #line 1 "/usr/include/bits/sched.h" #line 36 "/usr/include/bits/sched.h" #line 64 "/usr/include/bits/sched.h" struct sched_param { int __sched_priority; }; extern int clone (int (*__fn) (void *__arg), void *__child_stack, int __flags, void *__arg, ...) ; extern int unshare (int __flags) ; extern int sched_getcpu (void) ; struct __sched_param { int __sched_priority; }; typedef unsigned long int __cpu_mask; typedef struct { __cpu_mask __bits[1024 / (8 * sizeof (__cpu_mask))]; } cpu_set_t; #line 146 "/usr/include/bits/sched.h" #line 164 "/usr/include/bits/sched.h" #line 174 "/usr/include/bits/sched.h" extern int __sched_cpucount (size_t __setsize, const cpu_set_t *__setp) ; extern cpu_set_t *__sched_cpualloc (size_t __count) ; extern void __sched_cpufree (cpu_set_t *__set) ; #line 36 "/usr/include/sched.h" extern int sched_setparam (__pid_t __pid, const struct sched_param *__param) ; extern int sched_getparam (__pid_t __pid, struct sched_param *__param) ; extern int sched_setscheduler (__pid_t __pid, int __policy, const struct sched_param *__param) ; extern int sched_getscheduler (__pid_t __pid) ; extern int sched_yield (void) ; extern int sched_get_priority_max (int __algorithm) ; extern int sched_get_priority_min (int __algorithm) ; extern int sched_rr_get_interval (__pid_t __pid, struct timespec *__t) ; #line 117 "/usr/include/sched.h" #line 26 "/usr/include/pthread.h" #line 1 "/usr/include/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 30 "/usr/include/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 40 "/usr/include/time.h" #line 1 "/usr/include/bits/time.h" #line 43 "/usr/include/bits/time.h" #line 44 "/usr/include/time.h" typedef __clock_t clock_t; typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" struct tm { int tm_sec; int tm_min; int tm_hour; int tm_mday; int tm_mon; int tm_year; int tm_wday; int tm_yday; int tm_isdst; long int tm_gmtoff; const char *tm_zone; }; struct itimerspec { struct timespec it_interval; struct timespec it_value; }; struct sigevent; typedef __pid_t pid_t; extern clock_t clock (void) ; extern time_t time (time_t *__timer) ; extern double difftime (time_t __time1, time_t __time0) ; extern time_t mktime (struct tm *__tp) ; extern size_t strftime (char * __s, size_t __maxsize, const char * __format, const struct tm * __tp) ; #line 212 "/usr/include/time.h" #line 227 "/usr/include/time.h" extern struct tm *gmtime (const time_t *__timer) ; extern struct tm *localtime (const time_t *__timer) ; extern struct tm *gmtime_r (const time_t * __timer, struct tm * __tp) ; extern struct tm *localtime_r (const time_t * __timer, struct tm * __tp) ; extern char *asctime (const struct tm *__tp) ; extern char *ctime (const time_t *__timer) ; extern char *asctime_r (const struct tm * __tp, char * __buf) ; extern char *ctime_r (const time_t * __timer, char * __buf) ; extern char *__tzname[2]; extern int __daylight; extern long int __timezone; extern char *tzname[2]; extern void tzset (void) ; extern int daylight; extern long int timezone; extern int stime (const time_t *__when) ; extern time_t timegm (struct tm *__tp) ; extern time_t timelocal (struct tm *__tp) ; extern int dysize (int __year) ; extern int nanosleep (const struct timespec *__requested_time, struct timespec *__remaining); extern int clock_getres (clockid_t __clock_id, struct timespec *__res) ; extern int clock_gettime (clockid_t __clock_id, struct timespec *__tp) ; extern int clock_settime (clockid_t __clock_id, const struct timespec *__tp) ; extern int clock_nanosleep (clockid_t __clock_id, int __flags, const struct timespec *__req, struct timespec *__rem); extern int clock_getcpuclockid (pid_t __pid, clockid_t *__clock_id) ; extern int timer_create (clockid_t __clock_id, struct sigevent * __evp, timer_t * __timerid) ; extern int timer_delete (timer_t __timerid) ; extern int timer_settime (timer_t __timerid, int __flags, const struct itimerspec * __value, struct itimerspec * __ovalue) ; extern int timer_gettime (timer_t __timerid, struct itimerspec *__value) ; extern int timer_getoverrun (timer_t __timerid) ; #line 400 "/usr/include/time.h" #line 415 "/usr/include/time.h" #line 27 "/usr/include/pthread.h" #line 1 "/usr/include/signal.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 30 "/usr/include/signal.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 34 "/usr/include/signal.h" #line 46 "/usr/include/signal.h" typedef __sigset_t sigset_t; #line 401 "/usr/include/signal.h" #line 30 "/usr/include/pthread.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 31 "/usr/include/pthread.h" #line 1 "/usr/include/bits/setjmp.h" #line 1 "/usr/include/bits/wordsize.h" #line 28 "/usr/include/bits/setjmp.h" typedef struct __sparc64_jmp_buf { struct __sparc64_jmp_buf *uc_link; unsigned long uc_flags; unsigned long uc_sigmask; struct __sparc64_jmp_buf_mcontext { unsigned long mc_gregs[53]; unsigned long mc_fp; unsigned long mc_i7; struct __sparc64_jmp_buf_fpu { union { unsigned int sregs[512]; unsigned long dregs[256]; long double qregs[128]; } mcfpu_fpregs; unsigned long mcfpu_fsr; unsigned long mcfpu_fprs; unsigned long mcfpu_gsr; unsigned long mcfpu_xasr; void *mcfpu_fq; unsigned char mcfpu_qcnt; unsigned char mcfpu_qentsz; unsigned char mcfpu_enab; } mc_fpregs; } uc_mcontext; } __jmp_buf[1]; #line 70 "/usr/include/bits/setjmp.h" #line 32 "/usr/include/pthread.h" #line 1 "/usr/include/bits/wordsize.h" #line 33 "/usr/include/pthread.h" enum { PTHREAD_CREATE_JOINABLE, PTHREAD_CREATE_DETACHED }; enum { PTHREAD_MUTEX_TIMED_NP, PTHREAD_MUTEX_RECURSIVE_NP, PTHREAD_MUTEX_ERRORCHECK_NP, PTHREAD_MUTEX_ADAPTIVE_NP #line 63 "/usr/include/pthread.h" }; #line 74 "/usr/include/pthread.h" #line 85 "/usr/include/pthread.h" #line 111 "/usr/include/pthread.h" enum { PTHREAD_RWLOCK_PREFER_READER_NP, PTHREAD_RWLOCK_PREFER_WRITER_NP, PTHREAD_RWLOCK_PREFER_WRITER_NONRECURSIVE_NP, PTHREAD_RWLOCK_DEFAULT_NP = PTHREAD_RWLOCK_PREFER_READER_NP }; #line 144 "/usr/include/pthread.h" enum { PTHREAD_INHERIT_SCHED, PTHREAD_EXPLICIT_SCHED }; enum { PTHREAD_SCOPE_SYSTEM, PTHREAD_SCOPE_PROCESS }; enum { PTHREAD_PROCESS_PRIVATE, PTHREAD_PROCESS_SHARED }; struct _pthread_cleanup_buffer { void (*__routine) (void *); void *__arg; int __canceltype; struct _pthread_cleanup_buffer *__prev; }; enum { PTHREAD_CANCEL_ENABLE, PTHREAD_CANCEL_DISABLE }; enum { PTHREAD_CANCEL_DEFERRED, PTHREAD_CANCEL_ASYNCHRONOUS }; extern int pthread_create (pthread_t * __newthread, const pthread_attr_t * __attr, void *(*__start_routine) (void *), void * __arg) ; extern void pthread_exit (void *__retval) ; extern int pthread_join (pthread_t __th, void **__thread_return); #line 258 "/usr/include/pthread.h" extern int pthread_detach (pthread_t __th) ; extern pthread_t pthread_self (void) ; extern int pthread_equal (pthread_t __thread1, pthread_t __thread2) ; extern int pthread_attr_init (pthread_attr_t *__attr) ; extern int pthread_attr_destroy (pthread_attr_t *__attr) ; extern int pthread_attr_getdetachstate (const pthread_attr_t *__attr, int *__detachstate) ; extern int pthread_attr_setdetachstate (pthread_attr_t *__attr, int __detachstate) ; extern int pthread_attr_getguardsize (const pthread_attr_t *__attr, size_t *__guardsize) ; extern int pthread_attr_setguardsize (pthread_attr_t *__attr, size_t __guardsize) ; extern int pthread_attr_getschedparam (const pthread_attr_t * __attr, struct sched_param * __param) ; extern int pthread_attr_setschedparam (pthread_attr_t * __attr, const struct sched_param * __param) ; extern int pthread_attr_getschedpolicy (const pthread_attr_t * __attr, int * __policy) ; extern int pthread_attr_setschedpolicy (pthread_attr_t *__attr, int __policy) ; extern int pthread_attr_getinheritsched (const pthread_attr_t * __attr, int * __inherit) ; extern int pthread_attr_setinheritsched (pthread_attr_t *__attr, int __inherit) ; extern int pthread_attr_getscope (const pthread_attr_t * __attr, int * __scope) ; extern int pthread_attr_setscope (pthread_attr_t *__attr, int __scope) ; extern int pthread_attr_getstackaddr (const pthread_attr_t * __attr, void ** __stackaddr) ; extern int pthread_attr_setstackaddr (pthread_attr_t *__attr, void *__stackaddr) ; extern int pthread_attr_getstacksize (const pthread_attr_t * __attr, size_t * __stacksize) ; extern int pthread_attr_setstacksize (pthread_attr_t *__attr, size_t __stacksize) ; extern int pthread_attr_getstack (const pthread_attr_t * __attr, void ** __stackaddr, size_t * __stacksize) ; extern int pthread_attr_setstack (pthread_attr_t *__attr, void *__stackaddr, size_t __stacksize) ; #line 407 "/usr/include/pthread.h" extern int pthread_setschedparam (pthread_t __target_thread, int __policy, const struct sched_param *__param) ; extern int pthread_getschedparam (pthread_t __target_thread, int * __policy, struct sched_param * __param) ; extern int pthread_setschedprio (pthread_t __target_thread, int __prio) ; #line 435 "/usr/include/pthread.h" #line 455 "/usr/include/pthread.h" extern int pthread_once (pthread_once_t *__once_control, void (*__init_routine) (void)) ; extern int pthread_setcancelstate (int __state, int *__oldstate); extern int pthread_setcanceltype (int __type, int *__oldtype); extern int pthread_cancel (pthread_t __th); extern void pthread_testcancel (void); typedef struct { struct { __jmp_buf __cancel_jmp_buf; int __mask_was_saved; } __cancel_jmp_buf[1]; void *__pad[4]; } __pthread_unwind_buf_t ; struct __pthread_cleanup_frame { void (*__cancel_routine) (void *); void *__cancel_arg; int __do_it; int __cancel_type; }; #line 629 "/usr/include/pthread.h" #line 652 "/usr/include/pthread.h" extern void __pthread_register_cancel (__pthread_unwind_buf_t *__buf) ; #line 663 "/usr/include/pthread.h" extern void __pthread_unregister_cancel (__pthread_unwind_buf_t *__buf) ; #line 701 "/usr/include/pthread.h" extern void __pthread_unwind_next (__pthread_unwind_buf_t *__buf) ; struct __jmp_buf_tag; extern int __sigsetjmp (struct __jmp_buf_tag *__env, int __savemask) ; extern int pthread_mutex_init (pthread_mutex_t *__mutex, const pthread_mutexattr_t *__mutexattr) ; extern int pthread_mutex_destroy (pthread_mutex_t *__mutex) ; extern int pthread_mutex_trylock (pthread_mutex_t *__mutex) ; extern int pthread_mutex_lock (pthread_mutex_t *__mutex) ; extern int pthread_mutex_timedlock (pthread_mutex_t * __mutex, const struct timespec * __abstime) ; extern int pthread_mutex_unlock (pthread_mutex_t *__mutex) ; #line 761 "/usr/include/pthread.h" extern int pthread_mutexattr_init (pthread_mutexattr_t *__attr) ; extern int pthread_mutexattr_destroy (pthread_mutexattr_t *__attr) ; extern int pthread_mutexattr_getpshared (const pthread_mutexattr_t * __attr, int * __pshared) ; extern int pthread_mutexattr_setpshared (pthread_mutexattr_t *__attr, int __pshared) ; #line 827 "/usr/include/pthread.h" #line 839 "/usr/include/pthread.h" extern int pthread_rwlock_init (pthread_rwlock_t * __rwlock, const pthread_rwlockattr_t * __attr) ; extern int pthread_rwlock_destroy (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlock_rdlock (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlock_tryrdlock (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlock_timedrdlock (pthread_rwlock_t * __rwlock, const struct timespec * __abstime) ; extern int pthread_rwlock_wrlock (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlock_trywrlock (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlock_timedwrlock (pthread_rwlock_t * __rwlock, const struct timespec * __abstime) ; extern int pthread_rwlock_unlock (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlockattr_init (pthread_rwlockattr_t *__attr) ; extern int pthread_rwlockattr_destroy (pthread_rwlockattr_t *__attr) ; extern int pthread_rwlockattr_getpshared (const pthread_rwlockattr_t * __attr, int * __pshared) ; extern int pthread_rwlockattr_setpshared (pthread_rwlockattr_t *__attr, int __pshared) ; extern int pthread_rwlockattr_getkind_np (const pthread_rwlockattr_t * __attr, int * __pref) ; extern int pthread_rwlockattr_setkind_np (pthread_rwlockattr_t *__attr, int __pref) ; extern int pthread_cond_init (pthread_cond_t * __cond, const pthread_condattr_t * __cond_attr) ; extern int pthread_cond_destroy (pthread_cond_t *__cond) ; extern int pthread_cond_signal (pthread_cond_t *__cond) ; extern int pthread_cond_broadcast (pthread_cond_t *__cond) ; extern int pthread_cond_wait (pthread_cond_t * __cond, pthread_mutex_t * __mutex) ; extern int pthread_cond_timedwait (pthread_cond_t * __cond, pthread_mutex_t * __mutex, const struct timespec * __abstime) ; extern int pthread_condattr_init (pthread_condattr_t *__attr) ; extern int pthread_condattr_destroy (pthread_condattr_t *__attr) ; extern int pthread_condattr_getpshared (const pthread_condattr_t * __attr, int * __pshared) ; extern int pthread_condattr_setpshared (pthread_condattr_t *__attr, int __pshared) ; extern int pthread_condattr_getclock (const pthread_condattr_t * __attr, __clockid_t * __clock_id) ; extern int pthread_condattr_setclock (pthread_condattr_t *__attr, __clockid_t __clock_id) ; extern int pthread_spin_init (pthread_spinlock_t *__lock, int __pshared) ; extern int pthread_spin_destroy (pthread_spinlock_t *__lock) ; extern int pthread_spin_lock (pthread_spinlock_t *__lock) ; extern int pthread_spin_trylock (pthread_spinlock_t *__lock) ; extern int pthread_spin_unlock (pthread_spinlock_t *__lock) ; extern int pthread_barrier_init (pthread_barrier_t * __barrier, const pthread_barrierattr_t * __attr, unsigned int __count) ; extern int pthread_barrier_destroy (pthread_barrier_t *__barrier) ; extern int pthread_barrier_wait (pthread_barrier_t *__barrier) ; extern int pthread_barrierattr_init (pthread_barrierattr_t *__attr) ; extern int pthread_barrierattr_destroy (pthread_barrierattr_t *__attr) ; extern int pthread_barrierattr_getpshared (const pthread_barrierattr_t * __attr, int * __pshared) ; extern int pthread_barrierattr_setpshared (pthread_barrierattr_t *__attr, int __pshared) ; extern int pthread_key_create (pthread_key_t *__key, void (*__destr_function) (void *)) ; extern int pthread_key_delete (pthread_key_t __key) ; extern void *pthread_getspecific (pthread_key_t __key) ; extern int pthread_setspecific (pthread_key_t __key, const void *__pointer) ; extern int pthread_getcpuclockid (pthread_t __thread_id, __clockid_t *__clock_id) ; extern int pthread_atfork (void (*__prepare) (void), void (*__parent) (void), void (*__child) (void)) ; #line 1116 "/usr/include/pthread.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_PTHREAD_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: setjmp.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/setjmp.h" #line 1 "/usr/include/setjmp.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/setjmp.h" #line 1 "/usr/include/bits/setjmp.h" #line 1 "/usr/include/bits/wordsize.h" #line 28 "/usr/include/bits/setjmp.h" typedef struct __sparc64_jmp_buf { struct __sparc64_jmp_buf *uc_link; unsigned long uc_flags; unsigned long uc_sigmask; struct __sparc64_jmp_buf_mcontext { unsigned long mc_gregs[53]; unsigned long mc_fp; unsigned long mc_i7; struct __sparc64_jmp_buf_fpu { union { unsigned int sregs[512]; unsigned long dregs[256]; long double qregs[128]; } mcfpu_fpregs; unsigned long mcfpu_fsr; unsigned long mcfpu_fprs; unsigned long mcfpu_gsr; unsigned long mcfpu_xasr; void *mcfpu_fq; unsigned char mcfpu_qcnt; unsigned char mcfpu_qentsz; unsigned char mcfpu_enab; } mc_fpregs; } uc_mcontext; } __jmp_buf[1]; #line 70 "/usr/include/bits/setjmp.h" #line 31 "/usr/include/setjmp.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 32 "/usr/include/setjmp.h" struct __jmp_buf_tag { __jmp_buf __jmpbuf; int __mask_was_saved; __sigset_t __saved_mask; }; typedef struct __jmp_buf_tag jmp_buf[1]; extern int setjmp (jmp_buf __env) ; extern int __sigsetjmp (struct __jmp_buf_tag __env[1], int __savemask) ; extern int _setjmp (struct __jmp_buf_tag __env[1]) ; #line 76 "/usr/include/setjmp.h" extern void longjmp (struct __jmp_buf_tag __env[1], int __val) ; extern void _longjmp (struct __jmp_buf_tag __env[1], int __val) ; typedef struct __jmp_buf_tag sigjmp_buf[1]; extern void siglongjmp (sigjmp_buf __env, int __val) ; #line 3 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/setjmp.h" #pragma unknown_control_flow(setjmp) #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(sigsetjmp) #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SETJMP_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/utsname.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/sys/utsname.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/sys/utsname.h" #line 1 "/usr/include/bits/utsname.h" #line 31 "/usr/include/sys/utsname.h" #line 47 "/usr/include/sys/utsname.h" struct utsname { char sysname[65]; char nodename[65]; char release[65]; char version[65]; char machine[65]; char __domainname[65]; }; extern int uname (struct utsname *__name) ; #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_UTSNAME_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: machine/endian.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "machine/endian.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "machine/endian.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "machine/endian.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c".: ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: limits.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 7 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "/usr/include/bits/posix1_lim.h" #line 1 "/usr/include/bits/local_lim.h" #line 34 "/usr/include/bits/local_lim.h" #line 1 "/usr/include/linux/limits.h" #line 17 "/usr/include/linux/limits.h" #line 37 "/usr/include/bits/local_lim.h" #line 154 "/usr/include/bits/posix1_lim.h" #line 62 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "/usr/include/bits/posix2_lim.h" #line 87 "/usr/include/bits/posix2_lim.h" #line 66 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_LIMITS_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: fcntl.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/fcntl.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/fcntl.h" #line 1 "/usr/include/bits/fcntl.h" #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; typedef char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 26 "/usr/include/bits/fcntl.h" #line 1 "/usr/include/bits/wordsize.h" #line 27 "/usr/include/bits/fcntl.h" #line 46 "/usr/include/bits/fcntl.h" #line 54 "/usr/include/bits/fcntl.h" #line 62 "/usr/include/bits/fcntl.h" #line 98 "/usr/include/bits/fcntl.h" #line 111 "/usr/include/bits/fcntl.h" #line 121 "/usr/include/bits/fcntl.h" #line 142 "/usr/include/bits/fcntl.h" #line 149 "/usr/include/bits/fcntl.h" #line 160 "/usr/include/bits/fcntl.h" struct flock { short int l_type; short int l_whence; __off_t l_start; __off_t l_len; __pid_t l_pid; short int __unused; }; #line 187 "/usr/include/bits/fcntl.h" #line 197 "/usr/include/bits/fcntl.h" #line 207 "/usr/include/bits/fcntl.h" #line 229 "/usr/include/bits/fcntl.h" #line 258 "/usr/include/bits/fcntl.h" #line 35 "/usr/include/fcntl.h" #line 51 "/usr/include/fcntl.h" #line 70 "/usr/include/fcntl.h" extern int fcntl (int __fd, int __cmd, ...); extern int open (const char *__file, int __oflag, ...) ; #line 97 "/usr/include/fcntl.h" #line 123 "/usr/include/fcntl.h" extern int creat (const char *__file, __mode_t __mode) ; #line 142 "/usr/include/fcntl.h" extern int lockf (int __fd, int __cmd, __off_t __len); #line 171 "/usr/include/fcntl.h" extern int posix_fadvise (int __fd, __off_t __offset, __off_t __len, int __advise) ; #line 191 "/usr/include/fcntl.h" extern int posix_fallocate (int __fd, __off_t __offset, __off_t __len); #line 212 "/usr/include/fcntl.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_FCNTL_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: string.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/string.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/string.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 34 "/usr/include/string.h" extern void *memcpy (void * __dest, const void * __src, size_t __n) ; extern void *memmove (void *__dest, const void *__src, size_t __n) ; extern void *memccpy (void * __dest, const void * __src, int __c, size_t __n) ; extern void *memset (void *__s, int __c, size_t __n) ; extern int memcmp (const void *__s1, const void *__s2, size_t __n) ; extern void *memchr (const void *__s, int __c, size_t __n) ; #line 80 "/usr/include/string.h" extern char *strcpy (char * __dest, const char * __src) ; extern char *strncpy (char * __dest, const char * __src, size_t __n) ; extern char *strcat (char * __dest, const char * __src) ; extern char *strncat (char * __dest, const char * __src, size_t __n) ; extern int strcmp (const char *__s1, const char *__s2) ; extern int strncmp (const char *__s1, const char *__s2, size_t __n) ; extern int strcoll (const char *__s1, const char *__s2) ; extern size_t strxfrm (char * __dest, const char * __src, size_t __n) ; #line 127 "/usr/include/string.h" extern char *strdup (const char *__s) ; #line 164 "/usr/include/string.h" extern char *strchr (const char *__s, int __c) ; extern char *strrchr (const char *__s, int __c) ; #line 180 "/usr/include/string.h" extern size_t strcspn (const char *__s, const char *__reject) ; extern size_t strspn (const char *__s, const char *__accept) ; extern char *strpbrk (const char *__s, const char *__accept) ; extern char *strstr (const char *__haystack, const char *__needle) ; extern char *strtok (char * __s, const char * __delim) ; extern char *__strtok_r (char * __s, const char * __delim, char ** __save_ptr) ; extern char *strtok_r (char * __s, const char * __delim, char ** __save_ptr) ; #line 238 "/usr/include/string.h" extern size_t strlen (const char *__s) ; #line 252 "/usr/include/string.h" extern char *strerror (int __errnum) ; extern int __xpg_strerror_r (int __errnum, char *__buf, size_t __buflen) ; #line 285 "/usr/include/string.h" extern void __bzero (void *__s, size_t __n) ; extern void bcopy (const void *__src, void *__dest, size_t __n) ; extern void bzero (void *__s, size_t __n) ; extern int bcmp (const void *__s1, const void *__s2, size_t __n) ; extern char *index (const char *__s, int __c) ; extern char *rindex (const char *__s, int __c) ; extern int ffs (int __i) ; #line 329 "/usr/include/string.h" extern int strcasecmp (const char *__s1, const char *__s2) ; extern int strncasecmp (const char *__s1, const char *__s2, size_t __n) ; #line 350 "/usr/include/string.h" extern char *strsep (char ** __stringp, const char * __delim) ; #line 396 "/usr/include/string.h" #line 431 "/usr/include/string.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_STRING_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/times.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/sys/times.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/sys/times.h" #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 58 "/usr/include/time.h" typedef __clock_t clock_t; #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 30 "/usr/include/sys/times.h" struct tms { clock_t tms_utime; clock_t tms_stime; clock_t tms_cutime; clock_t tms_cstime; }; extern clock_t times (struct tms *__buffer) ; #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_TIMES_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: io.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "io.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "io.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "io.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c".: ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: stdint.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/stdint.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/stdint.h" #line 1 "/usr/include/bits/wchar.h" #line 28 "/usr/include/stdint.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/stdint.h" typedef signed char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char uint8_t; typedef unsigned short int uint16_t; typedef unsigned int uint32_t; typedef unsigned long int uint64_t; typedef signed char int_least8_t; typedef short int int_least16_t; typedef int int_least32_t; typedef long int int_least64_t; typedef unsigned char uint_least8_t; typedef unsigned short int uint_least16_t; typedef unsigned int uint_least32_t; typedef unsigned long int uint_least64_t; typedef signed char int_fast8_t; typedef long int int_fast16_t; typedef long int int_fast32_t; typedef long int int_fast64_t; #line 102 "/usr/include/stdint.h" typedef unsigned char uint_fast8_t; typedef unsigned long int uint_fast16_t; typedef unsigned long int uint_fast32_t; typedef unsigned long int uint_fast64_t; #line 115 "/usr/include/stdint.h" typedef long int intptr_t; typedef unsigned long int uintptr_t; #line 131 "/usr/include/stdint.h" typedef long int intmax_t; typedef unsigned long int uintmax_t; #line 143 "/usr/include/stdint.h" #line 156 "/usr/include/stdint.h" #line 205 "/usr/include/stdint.h" #line 215 "/usr/include/stdint.h" #line 226 "/usr/include/stdint.h" #line 238 "/usr/include/stdint.h" #line 259 "/usr/include/stdint.h" #line 298 "/usr/include/stdint.h" #line 308 "/usr/include/stdint.h" #line 317 "/usr/include/stdint.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_STDINT_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: pwd.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/pwd.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/pwd.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 31 "/usr/include/pwd.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 34 "/usr/include/pwd.h" typedef __gid_t gid_t; typedef __uid_t uid_t; struct passwd { char *pw_name; char *pw_passwd; __uid_t pw_uid; __gid_t pw_gid; char *pw_gecos; char *pw_dir; char *pw_shell; }; #line 1 "/usr/include/stdio.h" #line 40 "/usr/include/stdio.h" struct _IO_FILE; typedef struct _IO_FILE FILE; #line 70 "/usr/include/stdio.h" #line 917 "/usr/include/stdio.h" #line 65 "/usr/include/pwd.h" extern void setpwent (void); extern void endpwent (void); extern struct passwd *getpwent (void); extern struct passwd *fgetpwent (FILE *__stream); extern int putpwent (const struct passwd * __p, FILE * __f); extern struct passwd *getpwuid (__uid_t __uid); extern struct passwd *getpwnam (const char *__name); extern int getpwent_r (struct passwd * __resultbuf, char * __buffer, size_t __buflen, struct passwd ** __result); extern int getpwuid_r (__uid_t __uid, struct passwd * __resultbuf, char * __buffer, size_t __buflen, struct passwd ** __result); extern int getpwnam_r (const char * __name, struct passwd * __resultbuf, char * __buffer, size_t __buflen, struct passwd ** __result); extern int fgetpwent_r (FILE * __stream, struct passwd * __resultbuf, char * __buffer, size_t __buflen, struct passwd ** __result); #line 183 "/usr/include/pwd.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_PWD_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: float.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/float.h" #line 65 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/float.h" #line 80 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/float.h" #line 91 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/float.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_FLOAT_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/param.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/sys/param.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 7 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "/usr/include/bits/posix1_lim.h" #line 1 "/usr/include/bits/local_lim.h" #line 34 "/usr/include/bits/local_lim.h" #line 1 "/usr/include/linux/limits.h" #line 17 "/usr/include/linux/limits.h" #line 37 "/usr/include/bits/local_lim.h" #line 154 "/usr/include/bits/posix1_lim.h" #line 62 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "/usr/include/bits/posix2_lim.h" #line 87 "/usr/include/bits/posix2_lim.h" #line 66 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 23 "/usr/include/sys/param.h" #line 1 "/usr/include/linux/param.h" #line 1 "/usr/include/asm/param.h" #line 1 "/usr/include/asm-s64fx/param.h" #line 6 "/usr/include/asm/param.h" #line 5 "/usr/include/linux/param.h" #line 25 "/usr/include/sys/param.h" #line 36 "/usr/include/sys/param.h" #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; typedef char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 43 "/usr/include/sys/param.h" #line 62 "/usr/include/sys/param.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_PARAM_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: netdb.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/netdb.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/netdb.h" #line 1 "/usr/include/netinet/in.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 24 "/usr/include/netinet/in.h" #line 1 "/usr/include/stdint.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/stdint.h" #line 1 "/usr/include/bits/wchar.h" #line 28 "/usr/include/stdint.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/stdint.h" typedef signed char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char uint8_t; typedef unsigned short int uint16_t; typedef unsigned int uint32_t; typedef unsigned long int uint64_t; typedef signed char int_least8_t; typedef short int int_least16_t; typedef int int_least32_t; typedef long int int_least64_t; typedef unsigned char uint_least8_t; typedef unsigned short int uint_least16_t; typedef unsigned int uint_least32_t; typedef unsigned long int uint_least64_t; typedef signed char int_fast8_t; typedef long int int_fast16_t; typedef long int int_fast32_t; typedef long int int_fast64_t; #line 102 "/usr/include/stdint.h" typedef unsigned char uint_fast8_t; typedef unsigned long int uint_fast16_t; typedef unsigned long int uint_fast32_t; typedef unsigned long int uint_fast64_t; #line 115 "/usr/include/stdint.h" typedef long int intptr_t; typedef unsigned long int uintptr_t; #line 131 "/usr/include/stdint.h" typedef long int intmax_t; typedef unsigned long int uintmax_t; #line 143 "/usr/include/stdint.h" #line 156 "/usr/include/stdint.h" #line 205 "/usr/include/stdint.h" #line 215 "/usr/include/stdint.h" #line 226 "/usr/include/stdint.h" #line 238 "/usr/include/stdint.h" #line 259 "/usr/include/stdint.h" #line 298 "/usr/include/stdint.h" #line 308 "/usr/include/stdint.h" #line 317 "/usr/include/stdint.h" #line 25 "/usr/include/netinet/in.h" #line 1 "/usr/include/sys/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/socket.h" #line 1 "/usr/include/sys/uio.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/sys/uio.h" #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; #line 172 "/usr/include/sys/types.h" typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 25 "/usr/include/sys/uio.h" #line 1 "/usr/include/bits/uio.h" struct iovec { void *iov_base; size_t iov_len; }; #line 30 "/usr/include/sys/uio.h" extern ssize_t readv (int __fd, const struct iovec *__iovec, int __count); extern ssize_t writev (int __fd, const struct iovec *__iovec, int __count); #line 29 "/usr/include/sys/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 31 "/usr/include/sys/socket.h" #line 1 "/usr/include/bits/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 31 "/usr/include/bits/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 7 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "/usr/include/bits/posix1_lim.h" #line 1 "/usr/include/bits/local_lim.h" #line 34 "/usr/include/bits/local_lim.h" #line 1 "/usr/include/linux/limits.h" #line 17 "/usr/include/linux/limits.h" #line 37 "/usr/include/bits/local_lim.h" #line 154 "/usr/include/bits/posix1_lim.h" #line 62 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "/usr/include/bits/posix2_lim.h" #line 87 "/usr/include/bits/posix2_lim.h" #line 66 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 33 "/usr/include/bits/socket.h" typedef __socklen_t socklen_t; enum __socket_type { SOCK_STREAM = 1, SOCK_DGRAM = 2, SOCK_RAW = 3, SOCK_RDM = 4, SOCK_SEQPACKET = 5, SOCK_PACKET = 10 }; #line 96 "/usr/include/bits/socket.h" #line 130 "/usr/include/bits/socket.h" #line 142 "/usr/include/bits/socket.h" #line 1 "/usr/include/bits/sockaddr.h" typedef unsigned short int sa_family_t; #line 148 "/usr/include/bits/socket.h" struct sockaddr { sa_family_t sa_family; char sa_data[14]; }; #line 166 "/usr/include/bits/socket.h" struct sockaddr_storage { sa_family_t ss_family; __uint64_t __ss_align; char __ss_padding[(128 - (2 * sizeof (__uint64_t)))]; }; enum { MSG_OOB = 0x01, MSG_PEEK = 0x02, MSG_DONTROUTE = 0x04, #line 189 "/usr/include/bits/socket.h" MSG_CTRUNC = 0x08, MSG_PROXY = 0x10, MSG_TRUNC = 0x20, MSG_DONTWAIT = 0x40, MSG_EOR = 0x80, MSG_WAITALL = 0x100, MSG_FIN = 0x200, MSG_SYN = 0x400, MSG_CONFIRM = 0x800, MSG_RST = 0x1000, MSG_ERRQUEUE = 0x2000, MSG_NOSIGNAL = 0x4000, MSG_MORE = 0x8000, MSG_CMSG_CLOEXEC = 0x40000000 }; struct msghdr { void *msg_name; socklen_t msg_namelen; struct iovec *msg_iov; size_t msg_iovlen; void *msg_control; size_t msg_controllen; int msg_flags; }; struct cmsghdr { size_t cmsg_len; int cmsg_level; int cmsg_type; unsigned char __cmsg_data []; }; #line 272 "/usr/include/bits/socket.h" extern struct cmsghdr *__cmsg_nxthdr (struct msghdr *__mhdr, struct cmsghdr *__cmsg) ; #line 297 "/usr/include/bits/socket.h" enum { SCM_RIGHTS = 0x01 , SCM_CREDENTIALS = 0x02 }; struct ucred { pid_t pid; uid_t uid; gid_t gid; }; #line 1 "/usr/include/asm/socket.h" #line 1 "/usr/include/asm-s64fx/socket.h" #line 1 "/usr/include/asm/sockios.h" #line 1 "/usr/include/asm-s64fx/sockios.h" #line 12 "/usr/include/asm-s64fx/sockios.h" #line 6 "/usr/include/asm/sockios.h" #line 6 "/usr/include/asm-s64fx/socket.h" #line 19 "/usr/include/asm-s64fx/socket.h" #line 26 "/usr/include/asm-s64fx/socket.h" #line 36 "/usr/include/asm-s64fx/socket.h" #line 6 "/usr/include/asm/socket.h" #line 321 "/usr/include/bits/socket.h" struct linger { int l_onoff; int l_linger; }; #line 37 "/usr/include/sys/socket.h" struct osockaddr { unsigned short int sa_family; unsigned char sa_data[14]; }; enum { SHUT_RD = 0, SHUT_WR, SHUT_RDWR }; #line 96 "/usr/include/sys/socket.h" extern int socket (int __domain, int __type, int __protocol) ; extern int socketpair (int __domain, int __type, int __protocol, int __fds[2]) ; extern int bind (int __fd, const struct sockaddr * __addr, socklen_t __len) ; extern int getsockname (int __fd, struct sockaddr * __addr, socklen_t * __len) ; extern int connect (int __fd, const struct sockaddr * __addr, socklen_t __len); extern int getpeername (int __fd, struct sockaddr * __addr, socklen_t * __len) ; extern ssize_t send (int __fd, const void *__buf, size_t __n, int __flags); extern ssize_t recv (int __fd, void *__buf, size_t __n, int __flags); extern ssize_t sendto (int __fd, const void *__buf, size_t __n, int __flags, const struct sockaddr * __addr, socklen_t __addr_len); extern ssize_t recvfrom (int __fd, void * __buf, size_t __n, int __flags, struct sockaddr * __addr, socklen_t * __addr_len); extern ssize_t sendmsg (int __fd, const struct msghdr *__message, int __flags); extern ssize_t recvmsg (int __fd, struct msghdr *__message, int __flags); extern int getsockopt (int __fd, int __level, int __optname, void * __optval, socklen_t * __optlen) ; extern int setsockopt (int __fd, int __level, int __optname, const void *__optval, socklen_t __optlen) ; extern int listen (int __fd, int __n) ; extern int accept (int __fd, struct sockaddr * __addr, socklen_t * __addr_len); extern int shutdown (int __fd, int __how) ; extern int sockatmark (int __fd) ; extern int isfdtype (int __fd, int __fdtype) ; #line 26 "/usr/include/netinet/in.h" enum { IPPROTO_IP = 0, IPPROTO_HOPOPTS = 0, IPPROTO_ICMP = 1, IPPROTO_IGMP = 2, IPPROTO_IPIP = 4, IPPROTO_TCP = 6, IPPROTO_EGP = 8, IPPROTO_PUP = 12, IPPROTO_UDP = 17, IPPROTO_IDP = 22, IPPROTO_TP = 29, IPPROTO_IPV6 = 41, IPPROTO_ROUTING = 43, IPPROTO_FRAGMENT = 44, IPPROTO_RSVP = 46, IPPROTO_GRE = 47, IPPROTO_ESP = 50, IPPROTO_AH = 51, IPPROTO_ICMPV6 = 58, IPPROTO_NONE = 59, IPPROTO_DSTOPTS = 60, IPPROTO_MTP = 92, IPPROTO_ENCAP = 98, IPPROTO_PIM = 103, IPPROTO_COMP = 108, IPPROTO_SCTP = 132, IPPROTO_RAW = 255, IPPROTO_MAX }; typedef uint16_t in_port_t; enum { IPPORT_ECHO = 7, IPPORT_DISCARD = 9, IPPORT_SYSTAT = 11, IPPORT_DAYTIME = 13, IPPORT_NETSTAT = 15, IPPORT_FTP = 21, IPPORT_TELNET = 23, IPPORT_SMTP = 25, IPPORT_TIMESERVER = 37, IPPORT_NAMESERVER = 42, IPPORT_WHOIS = 43, IPPORT_MTP = 57, IPPORT_TFTP = 69, IPPORT_RJE = 77, IPPORT_FINGER = 79, IPPORT_TTYLINK = 87, IPPORT_SUPDUP = 95, IPPORT_EXECSERVER = 512, IPPORT_LOGINSERVER = 513, IPPORT_CMDSERVER = 514, IPPORT_EFSSERVER = 520, IPPORT_BIFFUDP = 512, IPPORT_WHOSERVER = 513, IPPORT_ROUTESERVER = 520, IPPORT_RESERVED = 1024, IPPORT_USERRESERVED = 5000 }; typedef uint32_t in_addr_t; struct in_addr { in_addr_t s_addr; }; struct in6_addr { union { uint8_t u6_addr8[16]; uint16_t u6_addr16[8]; uint32_t u6_addr32[4]; } in6_u; }; extern const struct in6_addr in6addr_any; extern const struct in6_addr in6addr_loopback; struct sockaddr_in { sa_family_t sin_family; in_port_t sin_port; struct in_addr sin_addr; unsigned char sin_zero[sizeof (struct sockaddr) - (sizeof (unsigned short int)) - sizeof (in_port_t) - sizeof (struct in_addr)]; }; struct sockaddr_in6 { sa_family_t sin6_family; in_port_t sin6_port; uint32_t sin6_flowinfo; struct in6_addr sin6_addr; uint32_t sin6_scope_id; }; struct ip_mreq { struct in_addr imr_multiaddr; struct in_addr imr_interface; }; struct ip_mreq_source { struct in_addr imr_multiaddr; struct in_addr imr_interface; struct in_addr imr_sourceaddr; }; struct ipv6_mreq { struct in6_addr ipv6mr_multiaddr; unsigned int ipv6mr_interface; }; struct group_req { uint32_t gr_interface; struct sockaddr_storage gr_group; }; struct group_source_req { uint32_t gsr_interface; struct sockaddr_storage gsr_group; struct sockaddr_storage gsr_source; }; struct ip_msfilter { struct in_addr imsf_multiaddr; struct in_addr imsf_interface; uint32_t imsf_fmode; uint32_t imsf_numsrc; struct in_addr imsf_slist[1]; }; struct group_filter { uint32_t gf_interface; struct sockaddr_storage gf_group; uint32_t gf_fmode; uint32_t gf_numsrc; struct sockaddr_storage gf_slist[1]; }; #line 1 "/usr/include/bits/in.h" #line 53 "/usr/include/bits/in.h" #line 65 "/usr/include/bits/in.h" struct ip_opts { struct in_addr ip_dst; char ip_opts[40]; }; struct ip_mreqn { struct in_addr imr_multiaddr; struct in_addr imr_address; int imr_ifindex; }; struct in_pktinfo { int ipi_ifindex; struct in_addr ipi_spec_dst; struct in_addr ipi_addr; }; #line 115 "/usr/include/bits/in.h" #line 135 "/usr/include/bits/in.h" #line 147 "/usr/include/bits/in.h" #line 344 "/usr/include/netinet/in.h" extern uint32_t ntohl (uint32_t __netlong) ; extern uint16_t ntohs (uint16_t __netshort) ; extern uint32_t htonl (uint32_t __hostlong) ; extern uint16_t htons (uint16_t __hostshort) ; #line 1 "/usr/include/bits/byteswap.h" static unsigned short int __bswap_16 (unsigned short int __bsx) { return ((((__bsx) >> 8) & 0xffu) | (((__bsx) & 0xffu) << 8)); } static unsigned int __bswap_32 (unsigned int __bsx) { return ((((__bsx) & 0xff000000u) >> 24) | (((__bsx) & 0x00ff0000u) >> 8) | (((__bsx) & 0x0000ff00u) << 8) | (((__bsx) & 0x000000ffu) << 24)); } #line 86 "/usr/include/bits/byteswap.h" #line 364 "/usr/include/netinet/in.h" #line 385 "/usr/include/netinet/in.h" extern int bindresvport (int __sockfd, struct sockaddr_in *__sock_in) ; extern int bindresvport6 (int __sockfd, struct sockaddr_in6 *__sock_in) ; struct in6_pktinfo { struct in6_addr ipi6_addr; unsigned int ipi6_ifindex; }; struct ip6_mtuinfo { struct sockaddr_in6 ip6m_addr; uint32_t ip6m_mtu; }; #line 548 "/usr/include/netinet/in.h" #line 29 "/usr/include/netdb.h" #line 1 "/usr/include/rpc/netdb.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 40 "/usr/include/rpc/netdb.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 43 "/usr/include/rpc/netdb.h" struct rpcent { char *r_name; char **r_aliases; int r_number; }; extern void setrpcent (int __stayopen) ; extern void endrpcent (void) ; extern struct rpcent *getrpcbyname (const char *__name) ; extern struct rpcent *getrpcbynumber (int __number) ; extern struct rpcent *getrpcent (void) ; extern int getrpcbyname_r (const char *__name, struct rpcent *__result_buf, char *__buffer, size_t __buflen, struct rpcent **__result) ; extern int getrpcbynumber_r (int __number, struct rpcent *__result_buf, char *__buffer, size_t __buflen, struct rpcent **__result) ; extern int getrpcent_r (struct rpcent *__result_buf, char *__buffer, size_t __buflen, struct rpcent **__result) ; #line 34 "/usr/include/netdb.h" #line 42 "/usr/include/netdb.h" #line 1 "/usr/include/bits/netdb.h" struct netent { char *n_name; char **n_aliases; int n_addrtype; uint32_t n_net; }; #line 44 "/usr/include/netdb.h" #line 52 "/usr/include/netdb.h" extern int *__h_errno_location (void) ; #line 75 "/usr/include/netdb.h" extern void herror (const char *__str) ; extern const char *hstrerror (int __err_num) ; struct hostent { char *h_name; char **h_aliases; int h_addrtype; int h_length; char **h_addr_list; }; extern void sethostent (int __stay_open); extern void endhostent (void); extern struct hostent *gethostent (void); extern struct hostent *gethostbyaddr (const void *__addr, __socklen_t __len, int __type); extern struct hostent *gethostbyname (const char *__name); extern struct hostent *gethostbyname2 (const char *__name, int __af); extern int gethostent_r (struct hostent * __result_buf, char * __buf, size_t __buflen, struct hostent ** __result, int * __h_errnop); extern int gethostbyaddr_r (const void * __addr, __socklen_t __len, int __type, struct hostent * __result_buf, char * __buf, size_t __buflen, struct hostent ** __result, int * __h_errnop); extern int gethostbyname_r (const char * __name, struct hostent * __result_buf, char * __buf, size_t __buflen, struct hostent ** __result, int * __h_errnop); extern int gethostbyname2_r (const char * __name, int __af, struct hostent * __result_buf, char * __buf, size_t __buflen, struct hostent ** __result, int * __h_errnop); extern void setnetent (int __stay_open); extern void endnetent (void); extern struct netent *getnetent (void); extern struct netent *getnetbyaddr (uint32_t __net, int __type); extern struct netent *getnetbyname (const char *__name); extern int getnetent_r (struct netent * __result_buf, char * __buf, size_t __buflen, struct netent ** __result, int * __h_errnop); extern int getnetbyaddr_r (uint32_t __net, int __type, struct netent * __result_buf, char * __buf, size_t __buflen, struct netent ** __result, int * __h_errnop); extern int getnetbyname_r (const char * __name, struct netent * __result_buf, char * __buf, size_t __buflen, struct netent ** __result, int * __h_errnop); struct servent { char *s_name; char **s_aliases; int s_port; char *s_proto; }; extern void setservent (int __stay_open); extern void endservent (void); extern struct servent *getservent (void); extern struct servent *getservbyname (const char *__name, const char *__proto); extern struct servent *getservbyport (int __port, const char *__proto); extern int getservent_r (struct servent * __result_buf, char * __buf, size_t __buflen, struct servent ** __result); extern int getservbyname_r (const char * __name, const char * __proto, struct servent * __result_buf, char * __buf, size_t __buflen, struct servent ** __result); extern int getservbyport_r (int __port, const char * __proto, struct servent * __result_buf, char * __buf, size_t __buflen, struct servent ** __result); struct protoent { char *p_name; char **p_aliases; int p_proto; }; extern void setprotoent (int __stay_open); extern void endprotoent (void); extern struct protoent *getprotoent (void); extern struct protoent *getprotobyname (const char *__name); extern struct protoent *getprotobynumber (int __proto); extern int getprotoent_r (struct protoent * __result_buf, char * __buf, size_t __buflen, struct protoent ** __result); extern int getprotobyname_r (const char * __name, struct protoent * __result_buf, char * __buf, size_t __buflen, struct protoent ** __result); extern int getprotobynumber_r (int __proto, struct protoent * __result_buf, char * __buf, size_t __buflen, struct protoent ** __result); extern int setnetgrent (const char *__netgroup); extern void endnetgrent (void); extern int getnetgrent (char ** __hostp, char ** __userp, char ** __domainp); extern int innetgr (const char *__netgroup, const char *__host, const char *__user, const char *domain); extern int getnetgrent_r (char ** __hostp, char ** __userp, char ** __domainp, char * __buffer, size_t __buflen); extern int rcmd (char ** __ahost, unsigned short int __rport, const char * __locuser, const char * __remuser, const char * __cmd, int * __fd2p); extern int rcmd_af (char ** __ahost, unsigned short int __rport, const char * __locuser, const char * __remuser, const char * __cmd, int * __fd2p, sa_family_t __af); extern int rexec (char ** __ahost, int __rport, const char * __name, const char * __pass, const char * __cmd, int * __fd2p); extern int rexec_af (char ** __ahost, int __rport, const char * __name, const char * __pass, const char * __cmd, int * __fd2p, sa_family_t __af); extern int ruserok (const char *__rhost, int __suser, const char *__remuser, const char *__locuser); extern int ruserok_af (const char *__rhost, int __suser, const char *__remuser, const char *__locuser, sa_family_t __af); extern int rresvport (int *__alport); extern int rresvport_af (int *__alport, sa_family_t __af); struct addrinfo { int ai_flags; int ai_family; int ai_socktype; int ai_protocol; socklen_t ai_addrlen; struct sockaddr *ai_addr; char *ai_canonname; struct addrinfo *ai_next; }; #line 567 "/usr/include/netdb.h" #line 587 "/usr/include/netdb.h" #line 609 "/usr/include/netdb.h" #line 625 "/usr/include/netdb.h" extern int getaddrinfo (const char * __name, const char * __service, const struct addrinfo * __req, struct addrinfo ** __pai); extern void freeaddrinfo (struct addrinfo *__ai) ; extern const char *gai_strerror (int __ecode) ; extern int getnameinfo (const struct sockaddr * __sa, socklen_t __salen, char * __host, socklen_t __hostlen, char * __serv, socklen_t __servlen, unsigned int __flags); #line 681 "/usr/include/netdb.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_NETDB_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: search.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/search.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 24 "/usr/include/search.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 27 "/usr/include/search.h" #line 42 "/usr/include/search.h" extern void insque (void *__elem, void *__prev) ; extern void remque (void *__elem) ; typedef int (*__compar_fn_t) (const void *, const void *); typedef enum { FIND, ENTER } ACTION; typedef struct entry { char *key; void *data; } ENTRY; struct _ENTRY; extern ENTRY *hsearch (ENTRY __item, ACTION __action) ; extern int hcreate (size_t __nel) ; extern void hdestroy (void) ; #line 114 "/usr/include/search.h" typedef enum { preorder, postorder, endorder, leaf } VISIT; extern void *tsearch (const void *__key, void **__rootp, __compar_fn_t __compar); extern void *tfind (const void *__key, void *const *__rootp, __compar_fn_t __compar); extern void *tdelete (const void * __key, void ** __rootp, __compar_fn_t __compar); typedef void (*__action_fn_t) (const void *__nodep, VISIT __value, int __level); extern void twalk (const void *__root, __action_fn_t __action); #line 163 "/usr/include/search.h" extern void *lfind (const void *__key, const void *__base, size_t *__nmemb, size_t __size, __compar_fn_t __compar); extern void *lsearch (const void *__key, void *__base, size_t *__nmemb, size_t __size, __compar_fn_t __compar); #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SEARCH_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: mathimf.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "mathimf.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "mathimf.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "mathimf.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c".: ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/procfs.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/sys/procfs.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/sys/procfs.h" #line 1 "/usr/include/signal.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 30 "/usr/include/signal.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 100 "/usr/include/bits/sigset.h" extern int __sigismember (const __sigset_t *, int); extern int __sigaddset (__sigset_t *, int); extern int __sigdelset (__sigset_t *, int); #line 124 "/usr/include/bits/sigset.h" #line 34 "/usr/include/signal.h" typedef __sig_atomic_t sig_atomic_t; typedef __sigset_t sigset_t; #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 58 "/usr/include/signal.h" #line 1 "/usr/include/bits/signum.h" #line 52 "/usr/include/bits/signum.h" #line 72 "/usr/include/bits/signum.h" #line 59 "/usr/include/signal.h" typedef __pid_t pid_t; typedef __uid_t uid_t; typedef void (*__sighandler_t) (int); extern __sighandler_t __sysv_signal (int __sig, __sighandler_t __handler) ; extern __sighandler_t signal (int __sig, __sighandler_t __handler) ; #line 104 "/usr/include/signal.h" #line 112 "/usr/include/signal.h" extern int kill (__pid_t __pid, int __sig) ; extern int killpg (__pid_t __pgrp, int __sig) ; extern int raise (int __sig) ; extern __sighandler_t ssignal (int __sig, __sighandler_t __handler) ; extern int gsignal (int __sig) ; extern void psignal (int __sig, const char *__s); extern int __sigpause (int __sig_or_mask, int __is_sig); #line 169 "/usr/include/signal.h" extern int sigblock (int __mask) ; extern int sigsetmask (int __mask) ; extern int siggetmask (void) ; typedef __sighandler_t sig_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 210 "/usr/include/signal.h" #line 1 "/usr/include/bits/siginfo.h" #line 1 "/usr/include/bits/wordsize.h" #line 26 "/usr/include/bits/siginfo.h" typedef union sigval { int sival_int; void *sival_ptr; } sigval_t; #line 50 "/usr/include/bits/siginfo.h" typedef struct siginfo { int si_signo; int si_errno; int si_code; union { int _pad[((128 / sizeof (int)) - 4)]; struct { __pid_t si_pid; __uid_t si_uid; } _kill; struct { int si_tid; int si_overrun; sigval_t si_sigval; } _timer; struct { __pid_t si_pid; __uid_t si_uid; sigval_t si_sigval; } _rt; struct { __pid_t si_pid; __uid_t si_uid; int si_status; __clock_t si_utime; __clock_t si_stime; } _sigchld; struct { void *si_addr; int si_trapno; } _sigfault; struct { int si_band; int si_fd; } _sigpoll; } _sifields; } siginfo_t; #line 127 "/usr/include/bits/siginfo.h" enum { SI_ASYNCNL = -60, SI_TKILL = -6, SI_SIGIO, SI_ASYNCIO, SI_MESGQ, SI_TIMER, SI_QUEUE, SI_USER, SI_KERNEL = 0x80 }; enum { ILL_ILLOPC = 1, ILL_ILLOPN, ILL_ILLADR, ILL_ILLTRP, ILL_PRVOPC, ILL_PRVREG, ILL_COPROC, ILL_BADSTK }; enum { FPE_INTDIV = 1, FPE_INTOVF, FPE_FLTDIV, FPE_FLTOVF, FPE_FLTUND, FPE_FLTRES, FPE_FLTINV, FPE_FLTSUB }; enum { SEGV_MAPERR = 1, SEGV_ACCERR }; enum { BUS_ADRALN = 1, BUS_ADRERR, BUS_OBJERR }; enum { TRAP_BRKPT = 1, TRAP_TRACE }; enum { CLD_EXITED = 1, CLD_KILLED, CLD_DUMPED, CLD_TRAPPED, CLD_STOPPED, CLD_CONTINUED }; enum { POLL_IN = 1, POLL_OUT, POLL_MSG, POLL_ERR, POLL_PRI, POLL_HUP }; enum { EMT_TAGOVF = 1 }; #line 281 "/usr/include/bits/siginfo.h" typedef struct sigevent { sigval_t sigev_value; int sigev_signo; int sigev_notify; union { int _pad[((64 / sizeof (int)) - 4)]; struct { void (*_function) (sigval_t); void *_attribute; } _sigev_thread; } _sigev_un; } sigevent_t; enum { SIGEV_SIGNAL = 0, SIGEV_NONE, SIGEV_THREAD, SIGEV_THREAD_ID = 4 }; #line 213 "/usr/include/signal.h" extern int sigemptyset (sigset_t *__set) ; extern int sigfillset (sigset_t *__set) ; extern int sigaddset (sigset_t *__set, int __signo) ; extern int sigdelset (sigset_t *__set, int __signo) ; extern int sigismember (const sigset_t *__set, int __signo) ; #line 243 "/usr/include/signal.h" #line 1 "/usr/include/bits/sigaction.h" struct sigaction { union { __sighandler_t sa_handler; void (*sa_sigaction) (int, siginfo_t *, void *); } __sigaction_handler; __sigset_t sa_mask; unsigned long sa_flags; void (*sa_restorer) (void); }; #line 66 "/usr/include/bits/sigaction.h" #line 247 "/usr/include/signal.h" extern int sigprocmask (int __how, const sigset_t * __set, sigset_t * __oset) ; extern int sigsuspend (const sigset_t *__set) ; extern int sigaction (int __sig, const struct sigaction * __act, struct sigaction * __oact) ; extern int sigpending (sigset_t *__set) ; extern int sigwait (const sigset_t * __set, int * __sig) ; extern int sigwaitinfo (const sigset_t * __set, siginfo_t * __info) ; extern int sigtimedwait (const sigset_t * __set, siginfo_t * __info, const struct timespec * __timeout) ; extern int sigqueue (__pid_t __pid, int __sig, const union sigval __val) ; extern const char *const _sys_siglist[65]; extern const char *const sys_siglist[65]; struct sigvec { __sighandler_t sv_handler; int sv_mask; int sv_flags; }; extern int sigvec (int __sig, const struct sigvec *__vec, struct sigvec *__ovec) ; #line 1 "/usr/include/bits/sigcontext.h" #line 1 "/usr/include/bits/wordsize.h" #line 24 "/usr/include/bits/sigcontext.h" #line 1 "/usr/include/stdint.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/stdint.h" #line 1 "/usr/include/bits/wchar.h" #line 28 "/usr/include/stdint.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/stdint.h" typedef signed char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char uint8_t; typedef unsigned short int uint16_t; typedef unsigned int uint32_t; typedef unsigned long int uint64_t; typedef signed char int_least8_t; typedef short int int_least16_t; typedef int int_least32_t; typedef long int int_least64_t; typedef unsigned char uint_least8_t; typedef unsigned short int uint_least16_t; typedef unsigned int uint_least32_t; typedef unsigned long int uint_least64_t; typedef signed char int_fast8_t; typedef long int int_fast16_t; typedef long int int_fast32_t; typedef long int int_fast64_t; #line 102 "/usr/include/stdint.h" typedef unsigned char uint_fast8_t; typedef unsigned long int uint_fast16_t; typedef unsigned long int uint_fast32_t; typedef unsigned long int uint_fast64_t; #line 115 "/usr/include/stdint.h" typedef long int intptr_t; typedef unsigned long int uintptr_t; #line 131 "/usr/include/stdint.h" typedef long int intmax_t; typedef unsigned long int uintmax_t; #line 143 "/usr/include/stdint.h" #line 156 "/usr/include/stdint.h" #line 205 "/usr/include/stdint.h" #line 215 "/usr/include/stdint.h" #line 226 "/usr/include/stdint.h" #line 238 "/usr/include/stdint.h" #line 259 "/usr/include/stdint.h" #line 298 "/usr/include/stdint.h" #line 308 "/usr/include/stdint.h" #line 317 "/usr/include/stdint.h" #line 25 "/usr/include/bits/sigcontext.h" #line 48 "/usr/include/bits/sigcontext.h" typedef struct { unsigned int si_float_regs [64]; unsigned long si_fsr; unsigned long si_gsr; unsigned long si_fprs; uint64_t si_xglob_regs[32]; uint32_t si_xfloat_regs[448]; uint64_t si_xasr; } __siginfo_fpu_t; struct sigcontext { char sigc_info[128]; struct { unsigned long u_regs[16]; unsigned long tstate; unsigned long tpc; unsigned long tnpc; unsigned int y; unsigned int fprs; } sigc_regs; __siginfo_fpu_t * sigc_fpu_save; uint64_t si_txar; uint64_t si_sccr; struct { void * ss_sp; int ss_flags; unsigned long ss_size; } sigc_stack; unsigned long sigc_mask; }; #line 334 "/usr/include/signal.h" extern int sigreturn (struct sigcontext *__scp) ; #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 344 "/usr/include/signal.h" extern int siginterrupt (int __sig, int __interrupt) ; #line 1 "/usr/include/bits/sigstack.h" struct sigstack { void *ss_sp; int ss_onstack; }; enum { SS_ONSTACK = 1, SS_DISABLE }; typedef struct sigaltstack { void *ss_sp; int ss_flags; size_t ss_size; } stack_t; #line 351 "/usr/include/signal.h" extern int sigstack (struct sigstack *__ss, struct sigstack *__oss) ; extern int sigaltstack (const struct sigaltstack * __ss, struct sigaltstack * __oss) ; #line 384 "/usr/include/signal.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 389 "/usr/include/signal.h" #line 1 "/usr/include/bits/sigthread.h" extern int pthread_sigmask (int __how, const __sigset_t * __newmask, __sigset_t * __oldmask); extern int pthread_kill (pthread_t __threadid, int __signo) ; #line 390 "/usr/include/signal.h" extern int __libc_current_sigrtmin (void) ; extern int __libc_current_sigrtmax (void) ; #line 28 "/usr/include/sys/procfs.h" #line 1 "/usr/include/sys/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 24 "/usr/include/sys/time.h" #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 28 "/usr/include/sys/time.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 30 "/usr/include/sys/time.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" #line 35 "/usr/include/bits/sigset.h" #line 35 "/usr/include/sys/select.h" #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 32 "/usr/include/sys/time.h" #line 52 "/usr/include/sys/time.h" struct timezone { int tz_minuteswest; int tz_dsttime; }; typedef struct timezone * __timezone_ptr_t; extern int gettimeofday (struct timeval * __tv, __timezone_ptr_t __tz) ; extern int settimeofday (const struct timeval *__tv, const struct timezone *__tz) ; extern int adjtime (const struct timeval *__delta, struct timeval *__olddelta) ; enum __itimer_which { ITIMER_REAL = 0, ITIMER_VIRTUAL = 1, ITIMER_PROF = 2 }; struct itimerval { struct timeval it_interval; struct timeval it_value; }; typedef int __itimer_which_t; extern int getitimer (__itimer_which_t __which, struct itimerval *__value) ; extern int setitimer (__itimer_which_t __which, const struct itimerval * __new, struct itimerval * __old) ; extern int utimes (const char *__file, const struct timeval __tvp[2]) ; extern int lutimes (const char *__file, const struct timeval __tvp[2]) ; extern int futimes (int __fd, const struct timeval __tvp[2]) ; #line 159 "/usr/include/sys/time.h" #line 190 "/usr/include/sys/time.h" #line 29 "/usr/include/sys/procfs.h" #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; #line 172 "/usr/include/sys/types.h" typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 30 "/usr/include/sys/procfs.h" #line 1 "/usr/include/sys/ucontext.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/sys/ucontext.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/sys/ucontext.h" #line 82 "/usr/include/sys/ucontext.h" typedef unsigned long mc_greg_t; typedef mc_greg_t mc_gregset_t[53]; struct mc_fq { unsigned long *mcfq_addr; unsigned int mcfq_insn; }; struct mc_fpu { union { unsigned int sregs[512]; unsigned long dregs[256]; long double qregs[128]; } mcfpu_fregs; unsigned long mcfpu_fsr; unsigned long mcfpu_fprs; unsigned long mcfpu_gsr; unsigned long mcfpu_xasr; struct mc_fq *mcfpu_fq; unsigned char mcfpu_qcnt; unsigned char mcfpu_qentsz; unsigned char mcfpu_enab; unsigned char pad[5]; }; typedef struct mc_fpu mc_fpu_t; typedef struct { mc_gregset_t mc_gregs; mc_greg_t mc_fp; mc_greg_t mc_i7; mc_fpu_t mc_fpregs; } mcontext_t; typedef struct ucontext { struct ucontext *uc_link; unsigned long uc_flags; unsigned long __uc_sigmask; mcontext_t uc_mcontext; stack_t uc_stack; __sigset_t uc_sigmask; } ucontext_t; #line 186 "/usr/include/sys/ucontext.h" typedef long greg_t; #line 211 "/usr/include/sys/ucontext.h" typedef greg_t gregset_t[21]; struct rwindow { greg_t rw_local[8]; greg_t rw_in[8]; }; typedef struct gwindows { int wbcnt; int *spbuf[31]; struct rwindow wbuf[31]; } gwindows_t; struct fpq { unsigned long *fpq_addr; unsigned long fpq_instr; }; struct fq { union { double whole; struct fpq fpq; } FQu; }; typedef struct fpu { union { unsigned fpu_regs[512]; double fpu_dregs[256]; long double fpu_qregs[128]; } fpu_fr; struct fq *fpu_q; unsigned long fpu_fsr; unsigned char fpu_qcnt; unsigned char fpu_q_entrysize; unsigned char fpu_en; unsigned long fpu_xasr; } fpregset_t; #line 31 "/usr/include/sys/procfs.h" #line 1 "/usr/include/sys/user.h" struct sunos_regs { unsigned int psr, pc, npc, y; unsigned int regs[15]; }; struct sunos_fpqueue { unsigned int *addr; unsigned int inst; }; struct sunos_fp { union { unsigned int regs[32]; double reg_dbls[16]; } fregs; unsigned int fsr; unsigned int flags; unsigned int extra; unsigned int fpq_count; struct sunos_fpqueue fpq[16]; }; struct sunos_fpu { struct sunos_fp fpstatus; }; struct user { unsigned int magic; unsigned int len; struct sunos_regs regs; struct { unsigned char a_dynamic :1; unsigned char a_toolversion :7; unsigned char a_machtype; unsigned short a_info; unsigned int a_text; unsigned int a_data; unsigned int a_bss; unsigned int a_syms; unsigned int a_entry; unsigned int a_trsize; unsigned int a_drsize; } uexec; int signal; size_t u_tsize; size_t u_dsize; size_t u_ssize; char u_comm[17]; struct sunos_fpu fpu; unsigned int sigcode; }; #line 32 "/usr/include/sys/procfs.h" #line 1 "/usr/include/bits/wordsize.h" #line 33 "/usr/include/sys/procfs.h" typedef struct { unsigned long pr_regs[32]; unsigned long pr_fsr; unsigned long pr_gsr; unsigned long pr_fprs; } elf_fpregset_t; #line 68 "/usr/include/sys/procfs.h" typedef unsigned long elf_greg_t; typedef elf_greg_t elf_gregset_t[36]; struct elf_siginfo { int si_signo; int si_code; int si_errno; }; struct elf_prstatus { struct elf_siginfo pr_info; short int pr_cursig; unsigned long int pr_sigpend; unsigned long int pr_sighold; __pid_t pr_pid; __pid_t pr_ppid; __pid_t pr_pgrp; __pid_t pr_sid; struct timeval pr_utime; struct timeval pr_stime; struct timeval pr_cutime; struct timeval pr_cstime; elf_gregset_t pr_reg; int pr_fpvalid; }; struct elf_prpsinfo { char pr_state; char pr_sname; char pr_zomb; char pr_nice; unsigned long int pr_flag; unsigned int pr_uid; unsigned int pr_gid; int pr_pid, pr_ppid, pr_pgrp, pr_sid; char pr_fname[16]; char pr_psargs[(80)]; }; typedef void *psaddr_t; typedef elf_gregset_t prgregset_t; typedef elf_fpregset_t prfpregset_t; #line 1 "/usr/include/xos_sft/asm/xreg.h" struct xregs { uint64_t xregs[32]; uint64_t txar; uint64_t sccr; uint64_t watchpoint; uint64_t dcucr; uint64_t rsv[12]; }; struct xfpregs { uint64_t xfpregs[224]; uint64_t xasr; uint64_t fprs; }; #line 136 "/usr/include/sys/procfs.h" typedef struct xregs prxgregset_t; typedef struct xfpregs prxfpregset_t; typedef __pid_t lwpid_t; typedef struct elf_prstatus prstatus_t; typedef struct elf_prpsinfo prpsinfo_t; typedef struct { union { unsigned int pr_regs[32]; double pr_dregs[16]; } pr_fr; unsigned int __unused; unsigned int pr_fsr; unsigned char pr_qcnt; unsigned char pr_q_entrysize; unsigned char pr_en; unsigned int pr_q[64]; } elf_fpregset_t32; typedef unsigned int elf_greg_t32; typedef elf_greg_t32 elf_gregset_t32[38]; struct elf_prstatus32 { struct elf_siginfo pr_info; short int pr_cursig; unsigned int pr_sigpend; unsigned int pr_sighold; __pid_t pr_pid; __pid_t pr_ppid; __pid_t pr_pgrp; __pid_t pr_sid; struct { int tv_sec, tv_usec; } pr_utime, pr_stime, pr_cutime, pr_cstime; elf_gregset_t32 pr_reg; int pr_fpvalid; }; struct elf_prpsinfo32 { char pr_state; char pr_sname; char pr_zomb; char pr_nice; unsigned int pr_flag; unsigned short int pr_uid; unsigned short int pr_gid; int pr_pid, pr_ppid, pr_pgrp, pr_sid; char pr_fname[16]; char pr_psargs[(80)]; }; typedef elf_gregset_t32 prgregset32_t; typedef elf_fpregset_t32 prfpregset32_t; typedef struct elf_prstatus32 prstatus32_t; typedef struct elf_prpsinfo32 prpsinfo32_t; #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_PROCFS_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/resource.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/sys/resource.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/sys/resource.h" #line 1 "/usr/include/bits/resource.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 26 "/usr/include/bits/resource.h" enum __rlimit_resource { RLIMIT_CPU = 0, RLIMIT_FSIZE = 1, RLIMIT_DATA = 2, RLIMIT_STACK = 3, RLIMIT_CORE = 4, __RLIMIT_RSS = 5, RLIMIT_NOFILE = 6, __RLIMIT_OFILE = RLIMIT_NOFILE, RLIMIT_AS = 9, __RLIMIT_NPROC = 7, __RLIMIT_MEMLOCK = 8, __RLIMIT_LOCKS = 10, __RLIMIT_SIGPENDING = 11, __RLIMIT_MSGQUEUE = 12, __RLIMIT_NICE = 13, __RLIMIT_RTPRIO = 14, __RLIMIT_NLIMITS = 15, __RLIM_NLIMITS = __RLIMIT_NLIMITS }; #line 135 "/usr/include/bits/resource.h" typedef __rlim_t rlim_t; #line 150 "/usr/include/bits/resource.h" struct rlimit { rlim_t rlim_cur; rlim_t rlim_max; }; #line 168 "/usr/include/bits/resource.h" enum __rusage_who { RUSAGE_SELF = 0, RUSAGE_CHILDREN = -1 }; #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 183 "/usr/include/bits/resource.h" struct rusage { struct timeval ru_utime; struct timeval ru_stime; long int ru_maxrss; long int ru_ixrss; long int ru_idrss; long int ru_isrss; long int ru_minflt; long int ru_majflt; long int ru_nswap; long int ru_inblock; long int ru_oublock; long int ru_msgsnd; long int ru_msgrcv; long int ru_nsignals; long int ru_nvcsw; long int ru_nivcsw; }; enum __priority_which { PRIO_PROCESS = 0, PRIO_PGRP = 1, PRIO_USER = 2 }; #line 26 "/usr/include/sys/resource.h" typedef __id_t id_t; typedef int __rlimit_resource_t; typedef int __rusage_who_t; typedef int __priority_which_t; extern int getrlimit (__rlimit_resource_t __resource, struct rlimit *__rlimits) ; #line 65 "/usr/include/sys/resource.h" extern int setrlimit (__rlimit_resource_t __resource, const struct rlimit *__rlimits) ; #line 85 "/usr/include/sys/resource.h" extern int getrusage (__rusage_who_t __who, struct rusage *__usage) ; extern int getpriority (__priority_which_t __which, id_t __who) ; extern int setpriority (__priority_which_t __which, id_t __who, int __prio) ; #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_RESOURCE_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: unistd.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/unistd.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/unistd.h" #line 66 "/usr/include/unistd.h" #line 1 "/usr/include/bits/posix_opt.h" #line 174 "/usr/include/unistd.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 189 "/usr/include/unistd.h" typedef __ssize_t ssize_t; #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 198 "/usr/include/unistd.h" typedef __gid_t gid_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 224 "/usr/include/unistd.h" typedef __useconds_t useconds_t; typedef __pid_t pid_t; typedef __intptr_t intptr_t; typedef __socklen_t socklen_t; extern int access (const char *__name, int __type) ; #line 270 "/usr/include/unistd.h" #line 278 "/usr/include/unistd.h" extern __off_t lseek (int __fd, __off_t __offset, int __whence) ; #line 315 "/usr/include/unistd.h" extern int close (int __fd); extern ssize_t read (int __fd, void *__buf, size_t __nbytes) ; extern ssize_t write (int __fd, const void *__buf, size_t __n) ; #line 379 "/usr/include/unistd.h" extern int pipe (int __pipedes[2]) ; extern unsigned int alarm (unsigned int __seconds) ; extern unsigned int sleep (unsigned int __seconds); extern __useconds_t ualarm (__useconds_t __value, __useconds_t __interval) ; extern int usleep (__useconds_t __useconds); extern int pause (void); extern int chown (const char *__file, __uid_t __owner, __gid_t __group) ; extern int fchown (int __fd, __uid_t __owner, __gid_t __group) ; extern int lchown (const char *__file, __uid_t __owner, __gid_t __group) ; #line 455 "/usr/include/unistd.h" extern int chdir (const char *__path) ; extern int fchdir (int __fd) ; extern char *getcwd (char *__buf, size_t __size) ; #line 479 "/usr/include/unistd.h" extern char *getwd (char *__buf) ; extern int dup (int __fd) ; extern int dup2 (int __fd, int __fd2) ; extern char **__environ; extern int execve (const char *__path, char *const __argv[], char *const __envp[]) ; #line 513 "/usr/include/unistd.h" extern int execv (const char *__path, char *const __argv[]) ; extern int execle (const char *__path, const char *__arg, ...) ; extern int execl (const char *__path, const char *__arg, ...) ; extern int execvp (const char *__file, char *const __argv[]) ; extern int execlp (const char *__file, const char *__arg, ...) ; extern int nice (int __inc) ; extern void _exit (int __status) ; #line 1 "/usr/include/bits/confname.h" enum { _PC_LINK_MAX, _PC_MAX_CANON, _PC_MAX_INPUT, _PC_NAME_MAX, _PC_PATH_MAX, _PC_PIPE_BUF, _PC_CHOWN_RESTRICTED, _PC_NO_TRUNC, _PC_VDISABLE, _PC_SYNC_IO, _PC_ASYNC_IO, _PC_PRIO_IO, _PC_SOCK_MAXBUF, _PC_FILESIZEBITS, _PC_REC_INCR_XFER_SIZE, _PC_REC_MAX_XFER_SIZE, _PC_REC_MIN_XFER_SIZE, _PC_REC_XFER_ALIGN, _PC_ALLOC_SIZE_MIN, _PC_SYMLINK_MAX, _PC_2_SYMLINKS }; enum { _SC_ARG_MAX, _SC_CHILD_MAX, _SC_CLK_TCK, _SC_NGROUPS_MAX, _SC_OPEN_MAX, _SC_STREAM_MAX, _SC_TZNAME_MAX, _SC_JOB_CONTROL, _SC_SAVED_IDS, _SC_REALTIME_SIGNALS, _SC_PRIORITY_SCHEDULING, _SC_TIMERS, _SC_ASYNCHRONOUS_IO, _SC_PRIORITIZED_IO, _SC_SYNCHRONIZED_IO, _SC_FSYNC, _SC_MAPPED_FILES, _SC_MEMLOCK, _SC_MEMLOCK_RANGE, _SC_MEMORY_PROTECTION, _SC_MESSAGE_PASSING, _SC_SEMAPHORES, _SC_SHARED_MEMORY_OBJECTS, _SC_AIO_LISTIO_MAX, _SC_AIO_MAX, _SC_AIO_PRIO_DELTA_MAX, _SC_DELAYTIMER_MAX, _SC_MQ_OPEN_MAX, _SC_MQ_PRIO_MAX, _SC_VERSION, _SC_PAGESIZE, _SC_RTSIG_MAX, _SC_SEM_NSEMS_MAX, _SC_SEM_VALUE_MAX, _SC_SIGQUEUE_MAX, _SC_TIMER_MAX, _SC_BC_BASE_MAX, _SC_BC_DIM_MAX, _SC_BC_SCALE_MAX, _SC_BC_STRING_MAX, _SC_COLL_WEIGHTS_MAX, _SC_EQUIV_CLASS_MAX, _SC_EXPR_NEST_MAX, _SC_LINE_MAX, _SC_RE_DUP_MAX, _SC_CHARCLASS_NAME_MAX, _SC_2_VERSION, _SC_2_C_BIND, _SC_2_C_DEV, _SC_2_FORT_DEV, _SC_2_FORT_RUN, _SC_2_SW_DEV, _SC_2_LOCALEDEF, _SC_PII, _SC_PII_XTI, _SC_PII_SOCKET, _SC_PII_INTERNET, _SC_PII_OSI, _SC_POLL, _SC_SELECT, _SC_UIO_MAXIOV, _SC_IOV_MAX = _SC_UIO_MAXIOV, _SC_PII_INTERNET_STREAM, _SC_PII_INTERNET_DGRAM, _SC_PII_OSI_COTS, _SC_PII_OSI_CLTS, _SC_PII_OSI_M, _SC_T_IOV_MAX, _SC_THREADS, _SC_THREAD_SAFE_FUNCTIONS, _SC_GETGR_R_SIZE_MAX, _SC_GETPW_R_SIZE_MAX, _SC_LOGIN_NAME_MAX, _SC_TTY_NAME_MAX, _SC_THREAD_DESTRUCTOR_ITERATIONS, _SC_THREAD_KEYS_MAX, _SC_THREAD_STACK_MIN, _SC_THREAD_THREADS_MAX, _SC_THREAD_ATTR_STACKADDR, _SC_THREAD_ATTR_STACKSIZE, _SC_THREAD_PRIORITY_SCHEDULING, _SC_THREAD_PRIO_INHERIT, _SC_THREAD_PRIO_PROTECT, _SC_THREAD_PROCESS_SHARED, _SC_NPROCESSORS_CONF, _SC_NPROCESSORS_ONLN, _SC_PHYS_PAGES, _SC_AVPHYS_PAGES, _SC_ATEXIT_MAX, _SC_PASS_MAX, _SC_XOPEN_VERSION, _SC_XOPEN_XCU_VERSION, _SC_XOPEN_UNIX, _SC_XOPEN_CRYPT, _SC_XOPEN_ENH_I18N, _SC_XOPEN_SHM, _SC_2_CHAR_TERM, _SC_2_C_VERSION, _SC_2_UPE, _SC_XOPEN_XPG2, _SC_XOPEN_XPG3, _SC_XOPEN_XPG4, _SC_CHAR_BIT, _SC_CHAR_MAX, _SC_CHAR_MIN, _SC_INT_MAX, _SC_INT_MIN, _SC_LONG_BIT, _SC_WORD_BIT, _SC_MB_LEN_MAX, _SC_NZERO, _SC_SSIZE_MAX, _SC_SCHAR_MAX, _SC_SCHAR_MIN, _SC_SHRT_MAX, _SC_SHRT_MIN, _SC_UCHAR_MAX, _SC_UINT_MAX, _SC_ULONG_MAX, _SC_USHRT_MAX, _SC_NL_ARGMAX, _SC_NL_LANGMAX, _SC_NL_MSGMAX, _SC_NL_NMAX, _SC_NL_SETMAX, _SC_NL_TEXTMAX, _SC_XBS5_ILP32_OFF32, _SC_XBS5_ILP32_OFFBIG, _SC_XBS5_LP64_OFF64, _SC_XBS5_LPBIG_OFFBIG, _SC_XOPEN_LEGACY, _SC_XOPEN_REALTIME, _SC_XOPEN_REALTIME_THREADS, _SC_ADVISORY_INFO, _SC_BARRIERS, _SC_BASE, _SC_C_LANG_SUPPORT, _SC_C_LANG_SUPPORT_R, _SC_CLOCK_SELECTION, _SC_CPUTIME, _SC_THREAD_CPUTIME, _SC_DEVICE_IO, _SC_DEVICE_SPECIFIC, _SC_DEVICE_SPECIFIC_R, _SC_FD_MGMT, _SC_FIFO, _SC_PIPE, _SC_FILE_ATTRIBUTES, _SC_FILE_LOCKING, _SC_FILE_SYSTEM, _SC_MONOTONIC_CLOCK, _SC_MULTI_PROCESS, _SC_SINGLE_PROCESS, _SC_NETWORKING, _SC_READER_WRITER_LOCKS, _SC_SPIN_LOCKS, _SC_REGEXP, _SC_REGEX_VERSION, _SC_SHELL, _SC_SIGNALS, _SC_SPAWN, _SC_SPORADIC_SERVER, _SC_THREAD_SPORADIC_SERVER, _SC_SYSTEM_DATABASE, _SC_SYSTEM_DATABASE_R, _SC_TIMEOUTS, _SC_TYPED_MEMORY_OBJECTS, _SC_USER_GROUPS, _SC_USER_GROUPS_R, _SC_2_PBS, _SC_2_PBS_ACCOUNTING, _SC_2_PBS_LOCATE, _SC_2_PBS_MESSAGE, _SC_2_PBS_TRACK, _SC_SYMLOOP_MAX, _SC_STREAMS, _SC_2_PBS_CHECKPOINT, _SC_V6_ILP32_OFF32, _SC_V6_ILP32_OFFBIG, _SC_V6_LP64_OFF64, _SC_V6_LPBIG_OFFBIG, _SC_HOST_NAME_MAX, _SC_TRACE, _SC_TRACE_EVENT_FILTER, _SC_TRACE_INHERIT, _SC_TRACE_LOG, _SC_LEVEL1_ICACHE_SIZE, _SC_LEVEL1_ICACHE_ASSOC, _SC_LEVEL1_ICACHE_LINESIZE, _SC_LEVEL1_DCACHE_SIZE, _SC_LEVEL1_DCACHE_ASSOC, _SC_LEVEL1_DCACHE_LINESIZE, _SC_LEVEL2_CACHE_SIZE, _SC_LEVEL2_CACHE_ASSOC, _SC_LEVEL2_CACHE_LINESIZE, _SC_LEVEL3_CACHE_SIZE, _SC_LEVEL3_CACHE_ASSOC, _SC_LEVEL3_CACHE_LINESIZE, _SC_LEVEL4_CACHE_SIZE, _SC_LEVEL4_CACHE_ASSOC, _SC_LEVEL4_CACHE_LINESIZE, _SC_IPV6 = _SC_LEVEL1_ICACHE_SIZE + 50, _SC_RAW_SOCKETS }; enum { _CS_PATH, _CS_V6_WIDTH_RESTRICTED_ENVS, _CS_GNU_LIBC_VERSION, _CS_GNU_LIBPTHREAD_VERSION, _CS_LFS_CFLAGS = 1000, _CS_LFS_LDFLAGS, _CS_LFS_LIBS, _CS_LFS_LINTFLAGS, _CS_LFS64_CFLAGS, _CS_LFS64_LDFLAGS, _CS_LFS64_LIBS, _CS_LFS64_LINTFLAGS, _CS_XBS5_ILP32_OFF32_CFLAGS = 1100, _CS_XBS5_ILP32_OFF32_LDFLAGS, _CS_XBS5_ILP32_OFF32_LIBS, _CS_XBS5_ILP32_OFF32_LINTFLAGS, _CS_XBS5_ILP32_OFFBIG_CFLAGS, _CS_XBS5_ILP32_OFFBIG_LDFLAGS, _CS_XBS5_ILP32_OFFBIG_LIBS, _CS_XBS5_ILP32_OFFBIG_LINTFLAGS, _CS_XBS5_LP64_OFF64_CFLAGS, _CS_XBS5_LP64_OFF64_LDFLAGS, _CS_XBS5_LP64_OFF64_LIBS, _CS_XBS5_LP64_OFF64_LINTFLAGS, _CS_XBS5_LPBIG_OFFBIG_CFLAGS, _CS_XBS5_LPBIG_OFFBIG_LDFLAGS, _CS_XBS5_LPBIG_OFFBIG_LIBS, _CS_XBS5_LPBIG_OFFBIG_LINTFLAGS, _CS_POSIX_V6_ILP32_OFF32_CFLAGS, _CS_POSIX_V6_ILP32_OFF32_LDFLAGS, _CS_POSIX_V6_ILP32_OFF32_LIBS, _CS_POSIX_V6_ILP32_OFF32_LINTFLAGS, _CS_POSIX_V6_ILP32_OFFBIG_CFLAGS, _CS_POSIX_V6_ILP32_OFFBIG_LDFLAGS, _CS_POSIX_V6_ILP32_OFFBIG_LIBS, _CS_POSIX_V6_ILP32_OFFBIG_LINTFLAGS, _CS_POSIX_V6_LP64_OFF64_CFLAGS, _CS_POSIX_V6_LP64_OFF64_LDFLAGS, _CS_POSIX_V6_LP64_OFF64_LIBS, _CS_POSIX_V6_LP64_OFF64_LINTFLAGS, _CS_POSIX_V6_LPBIG_OFFBIG_CFLAGS, _CS_POSIX_V6_LPBIG_OFFBIG_LDFLAGS, _CS_POSIX_V6_LPBIG_OFFBIG_LIBS, _CS_POSIX_V6_LPBIG_OFFBIG_LINTFLAGS }; #line 555 "/usr/include/unistd.h" extern long int pathconf (const char *__path, int __name) ; extern long int fpathconf (int __fd, int __name) ; extern long int sysconf (int __name) ; extern size_t confstr (int __name, char *__buf, size_t __len) ; extern __pid_t getpid (void) ; extern __pid_t getppid (void) ; extern __pid_t getpgrp (void) ; #line 589 "/usr/include/unistd.h" extern __pid_t __getpgid (__pid_t __pid) ; extern int setpgid (__pid_t __pid, __pid_t __pgid) ; extern int setpgrp (void) ; #line 630 "/usr/include/unistd.h" extern __pid_t setsid (void) ; extern __uid_t getuid (void) ; extern __uid_t geteuid (void) ; extern __gid_t getgid (void) ; extern __gid_t getegid (void) ; extern int getgroups (int __size, __gid_t __list[]) ; extern int setuid (__uid_t __uid) ; extern int setreuid (__uid_t __ruid, __uid_t __euid) ; extern int seteuid (__uid_t __uid) ; extern int setgid (__gid_t __gid) ; extern int setregid (__gid_t __rgid, __gid_t __egid) ; extern int setegid (__gid_t __gid) ; #line 718 "/usr/include/unistd.h" extern __pid_t fork (void) ; extern __pid_t vfork (void) ; extern char *ttyname (int __fd) ; extern int ttyname_r (int __fd, char *__buf, size_t __buflen) ; extern int isatty (int __fd) ; extern int ttyslot (void) ; extern int link (const char *__from, const char *__to) ; #line 766 "/usr/include/unistd.h" extern int symlink (const char *__from, const char *__to) ; extern ssize_t readlink (const char * __path, char * __buf, size_t __len) ; #line 790 "/usr/include/unistd.h" extern int unlink (const char *__name) ; extern int rmdir (const char *__path) ; extern __pid_t tcgetpgrp (int __fd) ; extern int tcsetpgrp (int __fd, __pid_t __pgrp_id) ; extern char *getlogin (void); extern int getlogin_r (char *__name, size_t __name_len) ; extern int setlogin (const char *__name) ; #line 1 "/usr/include/getopt.h" #line 48 "/usr/include/getopt.h" extern char *optarg; extern int optind; extern int opterr; extern int optopt; #line 122 "/usr/include/getopt.h" extern int getopt (int ___argc, char *const *___argv, const char *__shortopts) ; #line 169 "/usr/include/getopt.h" #line 838 "/usr/include/unistd.h" extern int gethostname (char *__name, size_t __len) ; extern int sethostname (const char *__name, size_t __len) ; extern int sethostid (long int __id) ; extern int getdomainname (char *__name, size_t __len) ; extern int setdomainname (const char *__name, size_t __len) ; extern int vhangup (void) ; extern int revoke (const char *__file) ; extern int profil (unsigned short int *__sample_buffer, size_t __size, size_t __offset, unsigned int __scale) ; extern int acct (const char *__name) ; extern char *getusershell (void) ; extern void endusershell (void) ; extern void setusershell (void) ; extern int daemon (int __nochdir, int __noclose) ; extern int chroot (const char *__path) ; extern char *getpass (const char *__prompt) ; extern int fsync (int __fd); extern long int gethostid (void); extern void sync (void) ; extern int getpagesize (void) ; extern int getdtablesize (void) ; extern int truncate (const char *__file, __off_t __length) ; #line 963 "/usr/include/unistd.h" extern int ftruncate (int __fd, __off_t __length) ; #line 982 "/usr/include/unistd.h" extern int brk (void *__addr) ; extern void *sbrk (intptr_t __delta) ; extern long int syscall (long int __sysno, ...) ; extern int lockf (int __fd, int __cmd, __off_t __len) ; #line 1047 "/usr/include/unistd.h" #line 1061 "/usr/include/unistd.h" extern int fdatasync (int __fildes); #line 1088 "/usr/include/unistd.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_UNISTD_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: netinet/in.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/netinet/in.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 24 "/usr/include/netinet/in.h" #line 1 "/usr/include/stdint.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/stdint.h" #line 1 "/usr/include/bits/wchar.h" #line 28 "/usr/include/stdint.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/stdint.h" typedef signed char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char uint8_t; typedef unsigned short int uint16_t; typedef unsigned int uint32_t; typedef unsigned long int uint64_t; typedef signed char int_least8_t; typedef short int int_least16_t; typedef int int_least32_t; typedef long int int_least64_t; typedef unsigned char uint_least8_t; typedef unsigned short int uint_least16_t; typedef unsigned int uint_least32_t; typedef unsigned long int uint_least64_t; typedef signed char int_fast8_t; typedef long int int_fast16_t; typedef long int int_fast32_t; typedef long int int_fast64_t; #line 102 "/usr/include/stdint.h" typedef unsigned char uint_fast8_t; typedef unsigned long int uint_fast16_t; typedef unsigned long int uint_fast32_t; typedef unsigned long int uint_fast64_t; #line 115 "/usr/include/stdint.h" typedef long int intptr_t; typedef unsigned long int uintptr_t; #line 131 "/usr/include/stdint.h" typedef long int intmax_t; typedef unsigned long int uintmax_t; #line 143 "/usr/include/stdint.h" #line 156 "/usr/include/stdint.h" #line 205 "/usr/include/stdint.h" #line 215 "/usr/include/stdint.h" #line 226 "/usr/include/stdint.h" #line 238 "/usr/include/stdint.h" #line 259 "/usr/include/stdint.h" #line 298 "/usr/include/stdint.h" #line 308 "/usr/include/stdint.h" #line 317 "/usr/include/stdint.h" #line 25 "/usr/include/netinet/in.h" #line 1 "/usr/include/sys/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/socket.h" #line 1 "/usr/include/sys/uio.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/sys/uio.h" #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; #line 172 "/usr/include/sys/types.h" typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 25 "/usr/include/sys/uio.h" #line 1 "/usr/include/bits/uio.h" struct iovec { void *iov_base; size_t iov_len; }; #line 30 "/usr/include/sys/uio.h" extern ssize_t readv (int __fd, const struct iovec *__iovec, int __count); extern ssize_t writev (int __fd, const struct iovec *__iovec, int __count); #line 29 "/usr/include/sys/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 31 "/usr/include/sys/socket.h" #line 1 "/usr/include/bits/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 31 "/usr/include/bits/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 7 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "/usr/include/bits/posix1_lim.h" #line 1 "/usr/include/bits/local_lim.h" #line 34 "/usr/include/bits/local_lim.h" #line 1 "/usr/include/linux/limits.h" #line 17 "/usr/include/linux/limits.h" #line 37 "/usr/include/bits/local_lim.h" #line 154 "/usr/include/bits/posix1_lim.h" #line 62 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "/usr/include/bits/posix2_lim.h" #line 87 "/usr/include/bits/posix2_lim.h" #line 66 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 33 "/usr/include/bits/socket.h" typedef __socklen_t socklen_t; enum __socket_type { SOCK_STREAM = 1, SOCK_DGRAM = 2, SOCK_RAW = 3, SOCK_RDM = 4, SOCK_SEQPACKET = 5, SOCK_PACKET = 10 }; #line 96 "/usr/include/bits/socket.h" #line 130 "/usr/include/bits/socket.h" #line 142 "/usr/include/bits/socket.h" #line 1 "/usr/include/bits/sockaddr.h" typedef unsigned short int sa_family_t; #line 148 "/usr/include/bits/socket.h" struct sockaddr { sa_family_t sa_family; char sa_data[14]; }; #line 166 "/usr/include/bits/socket.h" struct sockaddr_storage { sa_family_t ss_family; __uint64_t __ss_align; char __ss_padding[(128 - (2 * sizeof (__uint64_t)))]; }; enum { MSG_OOB = 0x01, MSG_PEEK = 0x02, MSG_DONTROUTE = 0x04, #line 189 "/usr/include/bits/socket.h" MSG_CTRUNC = 0x08, MSG_PROXY = 0x10, MSG_TRUNC = 0x20, MSG_DONTWAIT = 0x40, MSG_EOR = 0x80, MSG_WAITALL = 0x100, MSG_FIN = 0x200, MSG_SYN = 0x400, MSG_CONFIRM = 0x800, MSG_RST = 0x1000, MSG_ERRQUEUE = 0x2000, MSG_NOSIGNAL = 0x4000, MSG_MORE = 0x8000, MSG_CMSG_CLOEXEC = 0x40000000 }; struct msghdr { void *msg_name; socklen_t msg_namelen; struct iovec *msg_iov; size_t msg_iovlen; void *msg_control; size_t msg_controllen; int msg_flags; }; struct cmsghdr { size_t cmsg_len; int cmsg_level; int cmsg_type; unsigned char __cmsg_data []; }; #line 272 "/usr/include/bits/socket.h" extern struct cmsghdr *__cmsg_nxthdr (struct msghdr *__mhdr, struct cmsghdr *__cmsg) ; #line 297 "/usr/include/bits/socket.h" enum { SCM_RIGHTS = 0x01 , SCM_CREDENTIALS = 0x02 }; struct ucred { pid_t pid; uid_t uid; gid_t gid; }; #line 1 "/usr/include/asm/socket.h" #line 1 "/usr/include/asm-s64fx/socket.h" #line 1 "/usr/include/asm/sockios.h" #line 1 "/usr/include/asm-s64fx/sockios.h" #line 12 "/usr/include/asm-s64fx/sockios.h" #line 6 "/usr/include/asm/sockios.h" #line 6 "/usr/include/asm-s64fx/socket.h" #line 19 "/usr/include/asm-s64fx/socket.h" #line 26 "/usr/include/asm-s64fx/socket.h" #line 36 "/usr/include/asm-s64fx/socket.h" #line 6 "/usr/include/asm/socket.h" #line 321 "/usr/include/bits/socket.h" struct linger { int l_onoff; int l_linger; }; #line 37 "/usr/include/sys/socket.h" struct osockaddr { unsigned short int sa_family; unsigned char sa_data[14]; }; enum { SHUT_RD = 0, SHUT_WR, SHUT_RDWR }; #line 96 "/usr/include/sys/socket.h" extern int socket (int __domain, int __type, int __protocol) ; extern int socketpair (int __domain, int __type, int __protocol, int __fds[2]) ; extern int bind (int __fd, const struct sockaddr * __addr, socklen_t __len) ; extern int getsockname (int __fd, struct sockaddr * __addr, socklen_t * __len) ; extern int connect (int __fd, const struct sockaddr * __addr, socklen_t __len); extern int getpeername (int __fd, struct sockaddr * __addr, socklen_t * __len) ; extern ssize_t send (int __fd, const void *__buf, size_t __n, int __flags); extern ssize_t recv (int __fd, void *__buf, size_t __n, int __flags); extern ssize_t sendto (int __fd, const void *__buf, size_t __n, int __flags, const struct sockaddr * __addr, socklen_t __addr_len); extern ssize_t recvfrom (int __fd, void * __buf, size_t __n, int __flags, struct sockaddr * __addr, socklen_t * __addr_len); extern ssize_t sendmsg (int __fd, const struct msghdr *__message, int __flags); extern ssize_t recvmsg (int __fd, struct msghdr *__message, int __flags); extern int getsockopt (int __fd, int __level, int __optname, void * __optval, socklen_t * __optlen) ; extern int setsockopt (int __fd, int __level, int __optname, const void *__optval, socklen_t __optlen) ; extern int listen (int __fd, int __n) ; extern int accept (int __fd, struct sockaddr * __addr, socklen_t * __addr_len); extern int shutdown (int __fd, int __how) ; extern int sockatmark (int __fd) ; extern int isfdtype (int __fd, int __fdtype) ; #line 26 "/usr/include/netinet/in.h" enum { IPPROTO_IP = 0, IPPROTO_HOPOPTS = 0, IPPROTO_ICMP = 1, IPPROTO_IGMP = 2, IPPROTO_IPIP = 4, IPPROTO_TCP = 6, IPPROTO_EGP = 8, IPPROTO_PUP = 12, IPPROTO_UDP = 17, IPPROTO_IDP = 22, IPPROTO_TP = 29, IPPROTO_IPV6 = 41, IPPROTO_ROUTING = 43, IPPROTO_FRAGMENT = 44, IPPROTO_RSVP = 46, IPPROTO_GRE = 47, IPPROTO_ESP = 50, IPPROTO_AH = 51, IPPROTO_ICMPV6 = 58, IPPROTO_NONE = 59, IPPROTO_DSTOPTS = 60, IPPROTO_MTP = 92, IPPROTO_ENCAP = 98, IPPROTO_PIM = 103, IPPROTO_COMP = 108, IPPROTO_SCTP = 132, IPPROTO_RAW = 255, IPPROTO_MAX }; typedef uint16_t in_port_t; enum { IPPORT_ECHO = 7, IPPORT_DISCARD = 9, IPPORT_SYSTAT = 11, IPPORT_DAYTIME = 13, IPPORT_NETSTAT = 15, IPPORT_FTP = 21, IPPORT_TELNET = 23, IPPORT_SMTP = 25, IPPORT_TIMESERVER = 37, IPPORT_NAMESERVER = 42, IPPORT_WHOIS = 43, IPPORT_MTP = 57, IPPORT_TFTP = 69, IPPORT_RJE = 77, IPPORT_FINGER = 79, IPPORT_TTYLINK = 87, IPPORT_SUPDUP = 95, IPPORT_EXECSERVER = 512, IPPORT_LOGINSERVER = 513, IPPORT_CMDSERVER = 514, IPPORT_EFSSERVER = 520, IPPORT_BIFFUDP = 512, IPPORT_WHOSERVER = 513, IPPORT_ROUTESERVER = 520, IPPORT_RESERVED = 1024, IPPORT_USERRESERVED = 5000 }; typedef uint32_t in_addr_t; struct in_addr { in_addr_t s_addr; }; struct in6_addr { union { uint8_t u6_addr8[16]; uint16_t u6_addr16[8]; uint32_t u6_addr32[4]; } in6_u; }; extern const struct in6_addr in6addr_any; extern const struct in6_addr in6addr_loopback; struct sockaddr_in { sa_family_t sin_family; in_port_t sin_port; struct in_addr sin_addr; unsigned char sin_zero[sizeof (struct sockaddr) - (sizeof (unsigned short int)) - sizeof (in_port_t) - sizeof (struct in_addr)]; }; struct sockaddr_in6 { sa_family_t sin6_family; in_port_t sin6_port; uint32_t sin6_flowinfo; struct in6_addr sin6_addr; uint32_t sin6_scope_id; }; struct ip_mreq { struct in_addr imr_multiaddr; struct in_addr imr_interface; }; struct ip_mreq_source { struct in_addr imr_multiaddr; struct in_addr imr_interface; struct in_addr imr_sourceaddr; }; struct ipv6_mreq { struct in6_addr ipv6mr_multiaddr; unsigned int ipv6mr_interface; }; struct group_req { uint32_t gr_interface; struct sockaddr_storage gr_group; }; struct group_source_req { uint32_t gsr_interface; struct sockaddr_storage gsr_group; struct sockaddr_storage gsr_source; }; struct ip_msfilter { struct in_addr imsf_multiaddr; struct in_addr imsf_interface; uint32_t imsf_fmode; uint32_t imsf_numsrc; struct in_addr imsf_slist[1]; }; struct group_filter { uint32_t gf_interface; struct sockaddr_storage gf_group; uint32_t gf_fmode; uint32_t gf_numsrc; struct sockaddr_storage gf_slist[1]; }; #line 1 "/usr/include/bits/in.h" #line 53 "/usr/include/bits/in.h" #line 65 "/usr/include/bits/in.h" struct ip_opts { struct in_addr ip_dst; char ip_opts[40]; }; struct ip_mreqn { struct in_addr imr_multiaddr; struct in_addr imr_address; int imr_ifindex; }; struct in_pktinfo { int ipi_ifindex; struct in_addr ipi_spec_dst; struct in_addr ipi_addr; }; #line 115 "/usr/include/bits/in.h" #line 135 "/usr/include/bits/in.h" #line 147 "/usr/include/bits/in.h" #line 344 "/usr/include/netinet/in.h" extern uint32_t ntohl (uint32_t __netlong) ; extern uint16_t ntohs (uint16_t __netshort) ; extern uint32_t htonl (uint32_t __hostlong) ; extern uint16_t htons (uint16_t __hostshort) ; #line 1 "/usr/include/bits/byteswap.h" static unsigned short int __bswap_16 (unsigned short int __bsx) { return ((((__bsx) >> 8) & 0xffu) | (((__bsx) & 0xffu) << 8)); } static unsigned int __bswap_32 (unsigned int __bsx) { return ((((__bsx) & 0xff000000u) >> 24) | (((__bsx) & 0x00ff0000u) >> 8) | (((__bsx) & 0x0000ff00u) << 8) | (((__bsx) & 0x000000ffu) << 24)); } #line 86 "/usr/include/bits/byteswap.h" #line 364 "/usr/include/netinet/in.h" #line 385 "/usr/include/netinet/in.h" extern int bindresvport (int __sockfd, struct sockaddr_in *__sock_in) ; extern int bindresvport6 (int __sockfd, struct sockaddr_in6 *__sock_in) ; struct in6_pktinfo { struct in6_addr ipi6_addr; unsigned int ipi6_ifindex; }; struct ip6_mtuinfo { struct sockaddr_in6 ip6m_addr; uint32_t ip6m_mtu; }; #line 548 "/usr/include/netinet/in.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_NETINET_IN_H" to "1" ================================================================================ TEST checkRecursiveMacros from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:218) TESTING: checkRecursiveMacros from config.headers(config/BuildSystem/config/headers.py:218) Checks that the preprocessor allows recursive macros, and if not defines HAVE_BROKEN_RECURSIVE_MACRO Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" void a(int i, int j) {} #define a(b) a(b,__LINE__) int main() { a(0); ; return 0; } ================================================================================ TEST configureCacheDetails from config.utilities.cacheDetails(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/cacheDetails.py:78) TESTING: configureCacheDetails from config.utilities.cacheDetails(config/BuildSystem/config/utilities/cacheDetails.py:78) Try to determine the size and associativity of the cache. Pushing language C All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include long getconf_LEVEL1_DCACHE_SIZE() { long val = sysconf(_SC_LEVEL1_DCACHE_SIZE); return (16 <= val && val <= 2147483647) ? val : 32768; } int main() { ; return 0; } Popping language C Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include long getconf_LEVEL1_DCACHE_SIZE() { long val = sysconf(_SC_LEVEL1_DCACHE_SIZE); return (16 <= val && val <= 2147483647) ? val : 32768; } int main() { FILE *output = fopen("conftestval","w"); if (!output) return 1; fprintf(output,"%ld",getconf_LEVEL1_DCACHE_SIZE()); fclose(output);; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest Popping language C Defined "LEVEL1_DCACHE_SIZE" to "32768" Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include long getconf_LEVEL1_DCACHE_LINESIZE() { long val = sysconf(_SC_LEVEL1_DCACHE_LINESIZE); return (16 <= val && val <= 2147483647) ? val : 32; } int main() { FILE *output = fopen("conftestval","w"); if (!output) return 1; fprintf(output,"%ld",getconf_LEVEL1_DCACHE_LINESIZE()); fclose(output);; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest Popping language C Defined "LEVEL1_DCACHE_LINESIZE" to "32" Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include long getconf_LEVEL1_DCACHE_ASSOC() { long val = sysconf(_SC_LEVEL1_DCACHE_ASSOC); return (0 <= val && val <= 2147483647) ? val : 2; } int main() { FILE *output = fopen("conftestval","w"); if (!output) return 1; fprintf(output,"%ld",getconf_LEVEL1_DCACHE_ASSOC()); fclose(output);; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest Popping language C Defined "LEVEL1_DCACHE_ASSOC" to "0" ================================================================================ TEST check_siginfo_t from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:46) TESTING: check_siginfo_t from config.types(config/BuildSystem/config/types.py:46) Checks if siginfo_t exists in signal.h. This check is for windows, and C89 check. Checking for type: siginfo_t All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c", line 13: warning: variable "a" was declared but never referenced siginfo_t a;; ^ Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { siginfo_t a;; return 0; } siginfo_t found Defined "HAVE_SIGINFO_T" to "1" ================================================================================ TEST check__int64 from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:52) TESTING: check__int64 from config.types(config/BuildSystem/config/types.py:52) Checks if __int64 exists. This is primarily for windows. Checking for type: __int64 Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Possible ERROR while running compiler: exit code 512 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c", line 13: error: identifier "__int64" is undefined __int64 a;; ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { __int64 a;; return 0; } __int64 found ================================================================================ TEST checkSizeTypes from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:58) TESTING: checkSizeTypes from config.types(config/BuildSystem/config/types.py:58) Checks for types associated with sizes, such as size_t. Checking for type: size_t Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c", line 13: warning: variable "a" was declared but never referenced size_t a;; ^ Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { size_t a;; return 0; } size_t found ================================================================================ TEST checkFileTypes from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:68) TESTING: checkFileTypes from config.types(config/BuildSystem/config/types.py:68) Checks for types associated with files, such as mode_t, off_t, etc. Checking for type: mode_t Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c", line 13: warning: variable "a" was declared but never referenced mode_t a;; ^ Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { mode_t a;; return 0; } mode_t found Checking for type: off_t Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c", line 13: warning: variable "a" was declared but never referenced off_t a;; ^ Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { off_t a;; return 0; } off_t found ================================================================================ TEST checkIntegerTypes from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:63) TESTING: checkIntegerTypes from config.types(config/BuildSystem/config/types.py:63) Checks for types associated with integers, such as int32_t. Checking for type: int32_t Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c", line 13: warning: variable "a" was declared but never referenced int32_t a;; ^ Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { int32_t a;; return 0; } int32_t found ================================================================================ TEST checkPID from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:74) TESTING: checkPID from config.types(config/BuildSystem/config/types.py:74) Checks for pid_t, and defines it if necessary Checking for type: pid_t Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c", line 13: warning: variable "a" was declared but never referenced pid_t a;; ^ Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { pid_t a;; return 0; } pid_t found ================================================================================ TEST checkUID from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:78) TESTING: checkUID from config.types(config/BuildSystem/config/types.py:78) Checks for uid_t and gid_t, and defines them if necessary Source: #include "confdefs.h" #include "conffix.h" #include Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c" #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; typedef char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c" ================================================================================ TEST checkSignal from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:85) TESTING: checkSignal from config.types(config/BuildSystem/config/types.py:85) Checks the return type of signal() and defines RETSIGTYPE to that type name Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #ifdef signal #undef signal #endif #ifdef __cplusplus extern "C" void (*signal (int, void(*)(int)))(int); #else void (*signal())(); #endif int main() { ; return 0; } Defined "RETSIGTYPE" to "void" ================================================================================ TEST checkC99Complex from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:106) TESTING: checkC99Complex from config.types(config/BuildSystem/config/types.py:106) Check for complex numbers in in C99 std Note that since PETSc source code uses _Complex we test specifically for that, not complex Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c", line 6: warning: variable "x" was set but never used double _Complex x; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { double _Complex x; x = I; ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c", line 6: warning: variable "x" was set but never used double _Complex x; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { double _Complex x; x = I; ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_C99_COMPLEX" to "1" ================================================================================ TEST checkCxxComplex from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:117) TESTING: checkCxxComplex from config.types(config/BuildSystem/config/types.py:117) Check for complex numbers in namespace std Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { std::complex x; ; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_CXX_COMPLEX" to "1" Popping language Cxx ================================================================================ TEST checkFortranKind from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:138) TESTING: checkFortranKind from config.types(config/BuildSystem/config/types.py:138) Checks whether selected_int_kind etc work USE_FORTRANKIND Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.F Possible ERROR while running compiler: stderr: Fortran diagnostic messages: program name(main) jwd2006i-i "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.F", line 3: 'i' is declared but never referenced. jwd2006i-i "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.F", line 4: 'd' is declared but never referenced. Source: program main integer(kind=selected_int_kind(10)) i real(kind=selected_real_kind(10)) d end Defined "USE_FORTRANKIND" to "1" Popping language FC ================================================================================ TEST checkConst from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:150) TESTING: checkConst from config.types(config/BuildSystem/config/types.py:150) Checks for working const, and if not found defines it to empty string Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c", line 25: warning: variable "x" is used before its value is set if (x[0]); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c", line 30: warning: variable "t" is used before its value is set *t++ = 0; ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c", line 46: warning: variable "b" is used before its value is set struct s *b; b->j = 5; ^ Source: #include "confdefs.h" #include "conffix.h" int main() { /* Ultrix mips cc rejects this. */ typedef int charset[2]; const charset x; /* SunOS 4.1.1 cc rejects this. */ char const *const *ccp; char **p; /* NEC SVR4.0.2 mips cc rejects this. */ struct point {int x, y;}; static struct point const zero = {0,0}; /* AIX XL C 1.02.0.0 rejects this. It does not let you subtract one const X* pointer from another in an arm of an if-expression whose if-part is not a constant expression */ const char *g = "string"; ccp = &g + (g ? g-g : 0); /* HPUX 7.0 cc rejects these. */ ++ccp; p = (char**) ccp; ccp = (char const *const *) p; /* This section avoids unused variable warnings */ if (zero.x); if (x[0]); { /* SCO 3.2v4 cc rejects this. */ char *t; char const *s = 0 ? (char *) 0 : (char const *) 0; *t++ = 0; if (*s); } { /* Someone thinks the Sun supposedly-ANSI compiler will reject this. */ int x[] = {25, 17}; const int *foo = &x[0]; ++foo; } { /* Sun SC1.0 ANSI compiler rejects this -- but not the above. */ typedef const int *iptr; iptr p = 0; ++p; } { /* AIX XL C 1.02.0.0 rejects this saying "k.c", line 2.27: 1506-025 (S) Operand must be a modifiable lvalue. */ struct s { int j; const int *ap[3]; }; struct s *b; b->j = 5; } { /* ULTRIX-32 V3.1 (Rev 9) vcc rejects this */ const int foo = 10; /* Get rid of unused variable warning */ if (foo); } ; return 0; } ================================================================================ TEST checkEndian from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:206) TESTING: checkEndian from config.types(config/BuildSystem/config/types.py:206) If the machine is big endian, defines WORDS_BIGENDIAN Defined "WORDS_BIGENDIAN" to "1" ================================================================================ TEST checkSizeof from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:259) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:259) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: char Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(char)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Popping language C Defined "SIZEOF_CHAR" to "1" ================================================================================ TEST checkSizeof from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:259) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:259) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: void * Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(void *)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Popping language C Defined "SIZEOF_VOID_P" to "8" ================================================================================ TEST checkSizeof from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:259) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:259) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: short Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(short)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Popping language C Defined "SIZEOF_SHORT" to "2" ================================================================================ TEST checkSizeof from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:259) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:259) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: int Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(int)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Popping language C Defined "SIZEOF_INT" to "4" ================================================================================ TEST checkSizeof from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:259) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:259) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: long Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(long)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Popping language C Defined "SIZEOF_LONG" to "8" ================================================================================ TEST checkSizeof from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:259) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:259) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: long long Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(long long)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Popping language C Defined "SIZEOF_LONG_LONG" to "8" ================================================================================ TEST checkSizeof from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:259) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:259) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: float Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(float)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Popping language C Defined "SIZEOF_FLOAT" to "4" ================================================================================ TEST checkSizeof from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:259) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:259) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: double Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(double)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Popping language C Defined "SIZEOF_DOUBLE" to "8" ================================================================================ TEST checkSizeof from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:259) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:259) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: size_t Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(size_t)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Popping language C Defined "SIZEOF_SIZE_T" to "8" ================================================================================ TEST checkBitsPerByte from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:310) TESTING: checkBitsPerByte from config.types(config/BuildSystem/config/types.py:310) Determine the nubmer of bits per byte and define BITS_PER_BYTE Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #if STDC_HEADERS #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); char val[2]; int i = 0; if (!f) exit(1); val[0]='\1'; val[1]='\0'; while(val[0]) {val[0] <<= 1; i++;} fprintf(f, "%d\n", i); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Defined "BITS_PER_BYTE" to "8" ================================================================================ TEST checkVisibility from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:356) TESTING: checkVisibility from config.types(config/BuildSystem/config/types.py:356) ================================================================================ TEST configureMemAlign from PETSc.options.memAlign(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/memAlign.py:30) TESTING: configureMemAlign from PETSc.options.memAlign(config/PETSc/options/memAlign.py:30) Choose alignment Defined "MEMALIGN" to "16" Memory alignment is 16 ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [socket] in library ['socket', 'nsl'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char socket(); static void _check_socket() { socket(); } int main() { _check_socket();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -lsocket -lnsl -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lsocket Popping language C ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [handle_sigfpes] in library ['fpe'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char handle_sigfpes(); static void _check_handle_sigfpes() { handle_sigfpes(); } int main() { _check_handle_sigfpes();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -lfpe -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lfpe Popping language C ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [socket] in library ['socket', 'nsl'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char socket(); static void _check_socket() { socket(); } int main() { _check_socket();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -lsocket -lnsl -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lsocket Popping language C ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [handle_sigfpes] in library ['fpe'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char handle_sigfpes(); static void _check_handle_sigfpes() { handle_sigfpes(); } int main() { _check_handle_sigfpes();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -lfpe -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lfpe Popping language C ================================================================================ TEST checkMath from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:251) TESTING: checkMath from config.libraries(config/BuildSystem/config/libraries.py:251) Check for sin() in libm, the math library Checking for functions [sin floor log10 pow] in library [''] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c", line 5: warning: variable "y" was set but never used static void _check_sin() { double x = 0,y; y = sin(x); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c", line 8: warning: variable "y" was set but never used static void _check_floor() { double x = 0,y; y = floor(x); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c", line 11: warning: variable "y" was set but never used static void _check_log10() { double x = 0,y; y = log10(x); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c", line 14: warning: variable "y" was set but never used static void _check_pow() { double x = 0,y ; y = pow(x, x); ^ Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double sin(double); static void _check_sin() { double x = 0,y; y = sin(x); ; } double floor(double); static void _check_floor() { double x = 0,y; y = floor(x); ; } double log10(double); static void _check_log10() { double x = 0,y; y = log10(x); ; } double pow(double, double); static void _check_pow() { double x = 0,y ; y = pow(x, x); ; } int main() { _check_sin(); _check_floor(); _check_log10(); _check_pow();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Math functions are linked in by default ================================================================================ TEST checkMathErf from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:267) TESTING: checkMathErf from config.libraries(config/BuildSystem/config/libraries.py:267) Check for erf() in libm, the math library Checking for functions [erf] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c", line 5: warning: variable "y" was set but never used static void _check_erf() { double x = 0,y; y = erf(x); ^ Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double erf(double); static void _check_erf() { double x = 0,y; y = erf(x); ; } int main() { _check_erf();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C erf() found Defined "HAVE_ERF" to "1" ================================================================================ TEST checkMathTgamma from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:276) TESTING: checkMathTgamma from config.libraries(config/BuildSystem/config/libraries.py:276) Check for tgama() in libm, the math library Checking for functions [tgamma] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c", line 5: warning: variable "y" was set but never used static void _check_tgamma() { double x = 0,y; y = tgamma(x); ^ Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double tgamma(double); static void _check_tgamma() { double x = 0,y; y = tgamma(x); ; } int main() { _check_tgamma();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C tgamma() found Defined "HAVE_TGAMMA" to "1" ================================================================================ TEST checkMathFenv from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:285) TESTING: checkMathFenv from config.libraries(config/BuildSystem/config/libraries.py:285) Checks if can be used with FE_DFL_ENV Checking for functions [fesetenv] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_fesetenv() { fesetenv(FE_DFL_ENV);; } int main() { _check_fesetenv();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Defined "HAVE_FENV_H" to "1" ================================================================================ TEST checkMathLog2 from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:293) TESTING: checkMathLog2 from config.libraries(config/BuildSystem/config/libraries.py:293) Check for log2() in libm, the math library Checking for functions [log2] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c", line 5: warning: variable "y" was set but never used static void _check_log2() { double x = 1,y; y = log2(x); ^ Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double log2(double); static void _check_log2() { double x = 1,y; y = log2(x); ; } int main() { _check_log2();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C log2() found Defined "HAVE_LOG2" to "1" ================================================================================ TEST checkCompression from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:302) TESTING: checkCompression from config.libraries(config/BuildSystem/config/libraries.py:302) Check for libz, the compression library Checking for functions [compress uncompress] in library [''] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c", line 5: warning: variable "ret" was set but never used static void _check_compress() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = compress(dest, &destLen, source, sourceLen); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c", line 8: warning: variable "ret" was set but never used static void _check_uncompress() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = uncompress(dest, &destLen, source, sourceLen); ^ Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ int compress(char *dest, unsigned long *destLen, const char *source, unsigned long sourceLen); static void _check_compress() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = compress(dest, &destLen, source, sourceLen); ; } int uncompress(char *dest, unsigned long *destLen, const char *source, unsigned long sourceLen); static void _check_uncompress() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = uncompress(dest, &destLen, source, sourceLen); ; } int main() { _check_compress(); _check_uncompress();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o: In function `_check_compress': conftest.c:(.text+0x48): undefined reference to `compress' /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o: In function `_check_uncompress': conftest.c:(.text+0xa8): undefined reference to `uncompress' Popping language C Checking for functions [compress uncompress] in library ['z'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c", line 5: warning: variable "ret" was set but never used static void _check_compress() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = compress(dest, &destLen, source, sourceLen); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c", line 8: warning: variable "ret" was set but never used static void _check_uncompress() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = uncompress(dest, &destLen, source, sourceLen); ^ Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ int compress(char *dest, unsigned long *destLen, const char *source, unsigned long sourceLen); static void _check_compress() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = compress(dest, &destLen, source, sourceLen); ; } int uncompress(char *dest, unsigned long *destLen, const char *source, unsigned long sourceLen); static void _check_uncompress() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = uncompress(dest, &destLen, source, sourceLen); ; } int main() { _check_compress(); _check_uncompress();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -lz -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_LIBZ" to "1" Popping language C Using libz for the compression library ================================================================================ TEST checkRealtime from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:323) TESTING: checkRealtime from config.libraries(config/BuildSystem/config/libraries.py:323) Check for presence of clock_gettime() in realtime library (POSIX Realtime extensions) Checking for functions [clock_gettime] in library [''] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_clock_gettime() { struct timespec tp; clock_gettime(CLOCK_REALTIME,&tp);; } int main() { _check_clock_gettime();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C realtime functions are linked in by default ================================================================================ TEST checkDynamic from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:339) TESTING: checkDynamic from config.libraries(config/BuildSystem/config/libraries.py:339) Check for the header and libraries necessary for dynamic library manipulation Checking for functions [dlopen] in library ['dl'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dlopen(); static void _check_dlopen() { dlopen(); } int main() { _check_dlopen();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ldl -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_LIBDL" to "1" Popping language C Checking for header: dlfcn.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/dlfcn.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/dlfcn.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 27 "/usr/include/dlfcn.h" #line 1 "/usr/include/bits/dlfcn.h" #line 30 "/usr/include/dlfcn.h" #line 52 "/usr/include/dlfcn.h" extern void *dlopen (const char *__file, int __mode) ; extern int dlclose (void *__handle) ; extern void *dlsym (void * __handle, const char * __name) ; #line 80 "/usr/include/dlfcn.h" extern char *dlerror (void) ; #line 188 "/usr/include/dlfcn.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_DLFCN_H" to "1" ================================================================================ TEST configureLibraryOptions from PETSc.options.libraryOptions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/libraryOptions.py:37) TESTING: configureLibraryOptions from PETSc.options.libraryOptions(config/PETSc/options/libraryOptions.py:37) Sets PETSC_USE_DEBUG, PETSC_USE_INFO, PETSC_USE_LOG, PETSC_USE_CTABLE and PETSC_USE_FORTRAN_KERNELS Defined "USE_LOG" to "1" Defined "USE_DEBUG" to "1" Defined "USE_INFO" to "1" Defined "USE_CTABLE" to "1" **********Checking if running on BGL/IBM detected Checking for functions [bgl_perfctr_void] in library [''] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char bgl_perfctr_void(); static void _check_bgl_perfctr_void() { bgl_perfctr_void(); } int main() { _check_bgl_perfctr_void();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o: In function `_check_bgl_perfctr_void': conftest.c:(.text+0x4): undefined reference to `bgl_perfctr_void' Popping language C Checking for functions [ADIOI_BGL_Open] in library [''] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ADIOI_BGL_Open(); static void _check_ADIOI_BGL_Open() { ADIOI_BGL_Open(); } int main() { _check_ADIOI_BGL_Open();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o: In function `_check_ADIOI_BGL_Open': conftest.c:(.text+0x4): undefined reference to `ADIOI_BGL_Open' Popping language C *********BGL/IBM test failure Defined "USE_BACKWARD_LOOP" to "1" Defined "Alignx(a,b)" to " " ================================================================================ TEST configureISColorValueType from PETSc.options.libraryOptions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/libraryOptions.py:87) TESTING: configureISColorValueType from PETSc.options.libraryOptions(config/PETSc/options/libraryOptions.py:87) Sets PETSC_IS_COLOR_VALUE_TYPE, MPIU_COLORING_VALUE, IS_COLORING_MAX required by ISColor Defined "MPIU_COLORING_VALUE" to "MPI_UNSIGNED_SHORT" Defined "IS_COLORING_MAX" to "65535" Defined "IS_COLOR_VALUE_TYPE" to "short" Defined "IS_COLOR_VALUE_TYPE_SIZE" to "PETSC_SIZEOF_SHORT" ================================================================================ TEST configureCPURelax from config.atomics(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/atomics.py:17) TESTING: configureCPURelax from config.atomics(config/BuildSystem/config/atomics.py:17) Definitions for cpu relax assembly instructions All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics/conftest.c Possible ERROR while running compiler: exit code 256 stderr: .//FCCatRurp.s: Assembler messages: .//FCCatRurp.s:15: Error: Unknown opcode: `rep' Source: #include "confdefs.h" #include "conffix.h" int main() { asm volatile("rep; nop" ::: "memory");; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics/conftest.c Possible ERROR while running compiler: exit code 512 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics/conftest.c", line 5: error: identifier "HMT_low" is undefined do { HMT_low; HMT_medium; __asm__ __volatile__ ("":::"memory"); } while (0); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics/conftest.c", line 5: error: identifier "HMT_medium" is undefined do { HMT_low; HMT_medium; __asm__ __volatile__ ("":::"memory"); } while (0); ^ 2 errors detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics/conftest.c". Source: #include "confdefs.h" #include "conffix.h" int main() { do { HMT_low; HMT_medium; __asm__ __volatile__ ("":::"memory"); } while (0); return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { __asm__ __volatile__ ("":::"memory");; return 0; } Defined "CPU_RELAX()" to "__asm__ __volatile__ ("":::"memory")" ================================================================================ TEST configureMemoryBarriers from config.atomics(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/atomics.py:36) TESTING: configureMemoryBarriers from config.atomics(config/BuildSystem/config/atomics.py:36) Definitions for memory barrier instructions Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics/conftest.c Possible ERROR while running compiler: exit code 256 stderr: .//FCC5GwppX.s: Assembler messages: .//FCC5GwppX.s:15: Error: Unknown opcode: `mfence' Source: #include "confdefs.h" #include "conffix.h" int main() { asm volatile("mfence":::"memory"); return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics/conftest.c Possible ERROR while running compiler: exit code 256 stderr: .//FCCmdgpR2.s: Assembler messages: .//FCCmdgpR2.s:15: Error: Unknown opcode: `lfence' Source: #include "confdefs.h" #include "conffix.h" int main() { asm volatile("lfence":::"memory"); return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics/conftest.c Possible ERROR while running compiler: exit code 256 stderr: .//FCCmd2Nae.s: Assembler messages: .//FCCmd2Nae.s:15: Error: Unknown opcode: `sfence' Source: #include "confdefs.h" #include "conffix.h" int main() { asm volatile("sfence":::"memory"); return 0; } ================================================================================ TEST checkMemcmp from config.functions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/functions.py:110) TESTING: checkMemcmp from config.functions(config/BuildSystem/config/functions.py:110) Check for 8-bit clean memcmp Making executable to test memcmp() All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include void exit(int); int main() { char c0 = 0x40; char c1 = (char) 0x80; char c2 = (char) 0x81; exit(memcmp(&c0, &c2, 1) < 0 && memcmp(&c1, &c2, 1) < 0 ? 0 : 1); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest ================================================================================ TEST checkSysinfo from config.functions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/functions.py:135) TESTING: checkSysinfo from config.functions(config/BuildSystem/config/functions.py:135) Check whether sysinfo takes three arguments, and if it does define HAVE_SYSINFO_3ARG Checking for functions [sysinfo] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sysinfo(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_sysinfo) || defined (__stub___sysinfo) sysinfo_will_always_fail_with_ENOSYS(); #else sysinfo(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_SYSINFO" to "1" Checking for header: linux/kernel.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/linux/kernel.h" struct sysinfo { long uptime; unsigned long loads[3]; unsigned long totalram; unsigned long freeram; unsigned long sharedram; unsigned long bufferram; unsigned long totalswap; unsigned long freeswap; unsigned short procs; unsigned short pad; unsigned long totalhigh; unsigned long freehigh; unsigned int mem_unit; char _f[20-2*sizeof(long)-sizeof(int)]; }; #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_LINUX_KERNEL_H" to "1" Checking for header: sys/sysinfo.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/sys/sysinfo.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/sys/sysinfo.h" #line 1 "/usr/include/linux/kernel.h" struct sysinfo { long uptime; unsigned long loads[3]; unsigned long totalram; unsigned long freeram; unsigned long sharedram; unsigned long bufferram; unsigned long totalswap; unsigned long freeswap; unsigned short procs; unsigned short pad; unsigned long totalhigh; unsigned long freehigh; unsigned int mem_unit; char _f[20-2*sizeof(long)-sizeof(int)]; }; #line 26 "/usr/include/sys/sysinfo.h" extern int sysinfo (struct sysinfo *__info) ; extern int get_nprocs_conf (void) ; extern int get_nprocs (void) ; extern long int get_phys_pages (void) ; extern long int get_avphys_pages (void) ; #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_SYSINFO_H" to "1" Checking for header: sys/systeminfo.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "sys/systeminfo.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "sys/systeminfo.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "sys/systeminfo.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c".: Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c", line 13: catastrophic error: #error directive: "Cannot check sysinfo without special headers" # error "Cannot check sysinfo without special headers" ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" #ifdef HAVE_LINUX_KERNEL_H # include # include # ifdef HAVE_SYS_SYSINFO_H # include # endif #elif defined(HAVE_SYS_SYSTEMINFO_H) # include #else # error "Cannot check sysinfo without special headers" #endif int main() { char buf[10]; long count=10; sysinfo(1, buf, count); ; return 0; } Compile failed inside link ================================================================================ TEST checkVPrintf from config.functions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/functions.py:158) TESTING: checkVPrintf from config.functions(config/BuildSystem/config/functions.py:158) Checks whether vprintf requires a char * last argument, and if it does defines HAVE_VPRINTF_CHAR Checking for functions [vprintf] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char vprintf(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_vprintf) || defined (__stub___vprintf) vprintf_will_always_fail_with_ENOSYS(); #else vprintf(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_VPRINTF" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c", line 8: warning: variable "Argp" is used before its value is set vprintf( "%d", Argp ); ^ Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { va_list Argp; vprintf( "%d", Argp ); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl ================================================================================ TEST checkVFPrintf from config.functions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/functions.py:165) TESTING: checkVFPrintf from config.functions(config/BuildSystem/config/functions.py:165) Checks whether vfprintf requires a char * last argument, and if it does defines HAVE_VFPRINTF_CHAR Checking for functions [vfprintf] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char vfprintf(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_vfprintf) || defined (__stub___vfprintf) vfprintf_will_always_fail_with_ENOSYS(); #else vfprintf(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_VFPRINTF" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c", line 8: warning: variable "Argp" is used before its value is set vfprintf(stdout, "%d", Argp ); ^ Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { va_list Argp; vfprintf(stdout, "%d", Argp ); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl ================================================================================ TEST checkVSNPrintf from config.functions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/functions.py:172) TESTING: checkVSNPrintf from config.functions(config/BuildSystem/config/functions.py:172) Checks whether vsnprintf requires a char * last argument, and if it does defines HAVE_VSNPRINTF_CHAR Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { _vsnprintf(0,0,0,0); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o: In function `main': conftest.c:(.text+0x34): undefined reference to `_vsnprintf' Checking for functions [vsnprintf] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char vsnprintf(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_vsnprintf) || defined (__stub___vsnprintf) vsnprintf_will_always_fail_with_ENOSYS(); #else vsnprintf(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_VSNPRINTF" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c", line 8: warning: variable "Argp" is used before its value is set vsnprintf(str,5, "%d", Argp ); ^ Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { va_list Argp;char str[6]; vsnprintf(str,5, "%d", Argp ); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl ================================================================================ TEST checkNanosleep from config.functions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/functions.py:206) TESTING: checkNanosleep from config.functions(config/BuildSystem/config/functions.py:206) Check for functional nanosleep() - as time.h behaves differently for different compiler flags - like -std=c89 Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { struct timespec tp; tp.tv_sec = 0; tp.tv_nsec = (long)(1e9); nanosleep(&tp,0); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_NANOSLEEP" to "1" ================================================================================ TEST checkSignalHandlerType from config.functions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/functions.py:182) TESTING: checkSignalHandlerType from config.functions(config/BuildSystem/config/functions.py:182) Checks the type of C++ signals handlers, and defines SIGNAL_CAST to the correct value Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include static void myhandler(int sig) {} int main() { signal(SIGFPE,myhandler); ; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "SIGNAL_CAST" to " " Popping language Cxx ================================================================================ TEST checkFreeReturnType from config.functions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/functions.py:192) TESTING: checkFreeReturnType from config.functions(config/BuildSystem/config/functions.py:192) Checks whether free returns void or int, and defines HAVE_FREE_RETURN_INT Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Possible ERROR while running compiler: exit code 512 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c", line 6: warning: variable "p" is used before its value is set int ierr; void *p; ierr = free(p); return 0; ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c", line 6: error: a value of type "void" cannot be assigned to an entity of type "int" int ierr; void *p; ierr = free(p); return 0; ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c", line 8: warning: statement is unreachable return 0; ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c", line 6: warning: variable "ierr" was set but never used int ierr; void *p; ierr = free(p); return 0; ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include int main() { int ierr; void *p; ierr = free(p); return 0; ; return 0; } Compile failed inside link ================================================================================ TEST checkVariableArgumentLists from config.functions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/functions.py:198) TESTING: checkVariableArgumentLists from config.functions(config/BuildSystem/config/functions.py:198) Checks whether the variable argument list functionality is working Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c", line 7: warning: variable "l2" is used before its value is set va_copy(l1, l2); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c", line 10: warning: statement is unreachable return 0; ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c", line 6: warning: variable "l1" was set but never used va_list l1, l2; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { va_list l1, l2; va_copy(l1, l2); return 0; ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_VA_COPY" to "1" ================================================================================ TEST checkClassify from config.functions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/functions.py:89) TESTING: checkClassify from config.functions(config/BuildSystem/config/functions.py:89) Recursive decompose to rapidly classify functions as found or missing To confirm that a function is missing, we require a compile/link failure with only that function in a compilation unit. In contrast, we can confirm that many functions are present by compiling them all together in a large compilation unit. We optimistically compile everything together, then trim all functions that were named in the error message and bisect the result. The trimming is only an optimization to increase the likelihood of a big-batch compile succeeding; we do not rely on the compiler naming missing functions. Checking for functions [rand getdomainname _sleep snprintf realpath dlsym bzero _getcwd getwd uname _lseek sleep _access lseek usleep dlclose gethostname clock get_nprocs access _snprintf dlerror mkstemp fork getpagesize sbreak memalign sigset getcwd gethostbyname gettimeofday readlink _set_output_format PXFGETARG sigaction strcasecmp dlopen drand48 socket memmove signal popen getrusage times time sysctlbyname stricmp] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char rand(); char getdomainname(); char _sleep(); char snprintf(); char realpath(); char dlsym(); char bzero(); char _getcwd(); char getwd(); char uname(); char _lseek(); char sleep(); char _access(); char lseek(); char usleep(); char dlclose(); char gethostname(); char clock(); char get_nprocs(); char access(); char _snprintf(); char dlerror(); char mkstemp(); char fork(); char getpagesize(); char sbreak(); char memalign(); char sigset(); char getcwd(); char gethostbyname(); char gettimeofday(); char readlink(); char _set_output_format(); char PXFGETARG(); char sigaction(); char strcasecmp(); char dlopen(); char drand48(); char socket(); char memmove(); char signal(); char popen(); char getrusage(); char times(); char time(); char sysctlbyname(); char stricmp(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_rand) || defined (__stub___rand) rand_will_always_fail_with_ENOSYS(); #else rand(); #endif #if defined (__stub_getdomainname) || defined (__stub___getdomainname) getdomainname_will_always_fail_with_ENOSYS(); #else getdomainname(); #endif #if defined (__stub__sleep) || defined (__stub____sleep) _sleep_will_always_fail_with_ENOSYS(); #else _sleep(); #endif #if defined (__stub_snprintf) || defined (__stub___snprintf) snprintf_will_always_fail_with_ENOSYS(); #else snprintf(); #endif #if defined (__stub_realpath) || defined (__stub___realpath) realpath_will_always_fail_with_ENOSYS(); #else realpath(); #endif #if defined (__stub_dlsym) || defined (__stub___dlsym) dlsym_will_always_fail_with_ENOSYS(); #else dlsym(); #endif #if defined (__stub_bzero) || defined (__stub___bzero) bzero_will_always_fail_with_ENOSYS(); #else bzero(); #endif #if defined (__stub__getcwd) || defined (__stub____getcwd) _getcwd_will_always_fail_with_ENOSYS(); #else _getcwd(); #endif #if defined (__stub_getwd) || defined (__stub___getwd) getwd_will_always_fail_with_ENOSYS(); #else getwd(); #endif #if defined (__stub_uname) || defined (__stub___uname) uname_will_always_fail_with_ENOSYS(); #else uname(); #endif #if defined (__stub__lseek) || defined (__stub____lseek) _lseek_will_always_fail_with_ENOSYS(); #else _lseek(); #endif #if defined (__stub_sleep) || defined (__stub___sleep) sleep_will_always_fail_with_ENOSYS(); #else sleep(); #endif #if defined (__stub__access) || defined (__stub____access) _access_will_always_fail_with_ENOSYS(); #else _access(); #endif #if defined (__stub_lseek) || defined (__stub___lseek) lseek_will_always_fail_with_ENOSYS(); #else lseek(); #endif #if defined (__stub_usleep) || defined (__stub___usleep) usleep_will_always_fail_with_ENOSYS(); #else usleep(); #endif #if defined (__stub_dlclose) || defined (__stub___dlclose) dlclose_will_always_fail_with_ENOSYS(); #else dlclose(); #endif #if defined (__stub_gethostname) || defined (__stub___gethostname) gethostname_will_always_fail_with_ENOSYS(); #else gethostname(); #endif #if defined (__stub_clock) || defined (__stub___clock) clock_will_always_fail_with_ENOSYS(); #else clock(); #endif #if defined (__stub_get_nprocs) || defined (__stub___get_nprocs) get_nprocs_will_always_fail_with_ENOSYS(); #else get_nprocs(); #endif #if defined (__stub_access) || defined (__stub___access) access_will_always_fail_with_ENOSYS(); #else access(); #endif #if defined (__stub__snprintf) || defined (__stub____snprintf) _snprintf_will_always_fail_with_ENOSYS(); #else _snprintf(); #endif #if defined (__stub_dlerror) || defined (__stub___dlerror) dlerror_will_always_fail_with_ENOSYS(); #else dlerror(); #endif #if defined (__stub_mkstemp) || defined (__stub___mkstemp) mkstemp_will_always_fail_with_ENOSYS(); #else mkstemp(); #endif #if defined (__stub_fork) || defined (__stub___fork) fork_will_always_fail_with_ENOSYS(); #else fork(); #endif #if defined (__stub_getpagesize) || defined (__stub___getpagesize) getpagesize_will_always_fail_with_ENOSYS(); #else getpagesize(); #endif #if defined (__stub_sbreak) || defined (__stub___sbreak) sbreak_will_always_fail_with_ENOSYS(); #else sbreak(); #endif #if defined (__stub_memalign) || defined (__stub___memalign) memalign_will_always_fail_with_ENOSYS(); #else memalign(); #endif #if defined (__stub_sigset) || defined (__stub___sigset) sigset_will_always_fail_with_ENOSYS(); #else sigset(); #endif #if defined (__stub_getcwd) || defined (__stub___getcwd) getcwd_will_always_fail_with_ENOSYS(); #else getcwd(); #endif #if defined (__stub_gethostbyname) || defined (__stub___gethostbyname) gethostbyname_will_always_fail_with_ENOSYS(); #else gethostbyname(); #endif #if defined (__stub_gettimeofday) || defined (__stub___gettimeofday) gettimeofday_will_always_fail_with_ENOSYS(); #else gettimeofday(); #endif #if defined (__stub_readlink) || defined (__stub___readlink) readlink_will_always_fail_with_ENOSYS(); #else readlink(); #endif #if defined (__stub__set_output_format) || defined (__stub____set_output_format) _set_output_format_will_always_fail_with_ENOSYS(); #else _set_output_format(); #endif #if defined (__stub_PXFGETARG) || defined (__stub___PXFGETARG) PXFGETARG_will_always_fail_with_ENOSYS(); #else PXFGETARG(); #endif #if defined (__stub_sigaction) || defined (__stub___sigaction) sigaction_will_always_fail_with_ENOSYS(); #else sigaction(); #endif #if defined (__stub_strcasecmp) || defined (__stub___strcasecmp) strcasecmp_will_always_fail_with_ENOSYS(); #else strcasecmp(); #endif #if defined (__stub_dlopen) || defined (__stub___dlopen) dlopen_will_always_fail_with_ENOSYS(); #else dlopen(); #endif #if defined (__stub_drand48) || defined (__stub___drand48) drand48_will_always_fail_with_ENOSYS(); #else drand48(); #endif #if defined (__stub_socket) || defined (__stub___socket) socket_will_always_fail_with_ENOSYS(); #else socket(); #endif #if defined (__stub_memmove) || defined (__stub___memmove) memmove_will_always_fail_with_ENOSYS(); #else memmove(); #endif #if defined (__stub_signal) || defined (__stub___signal) signal_will_always_fail_with_ENOSYS(); #else signal(); #endif #if defined (__stub_popen) || defined (__stub___popen) popen_will_always_fail_with_ENOSYS(); #else popen(); #endif #if defined (__stub_getrusage) || defined (__stub___getrusage) getrusage_will_always_fail_with_ENOSYS(); #else getrusage(); #endif #if defined (__stub_times) || defined (__stub___times) times_will_always_fail_with_ENOSYS(); #else times(); #endif #if defined (__stub_time) || defined (__stub___time) time_will_always_fail_with_ENOSYS(); #else time(); #endif #if defined (__stub_sysctlbyname) || defined (__stub___sysctlbyname) sysctlbyname_will_always_fail_with_ENOSYS(); #else sysctlbyname(); #endif #if defined (__stub_stricmp) || defined (__stub___stricmp) stricmp_will_always_fail_with_ENOSYS(); #else stricmp(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o: In function `main': conftest.c:(.text+0x64): warning: the `getwd' function is dangerous and should not be used. conftest.c:(.text+0x1c): undefined reference to `_sleep' conftest.c:(.text+0x58): undefined reference to `_getcwd' conftest.c:(.text+0x7c): undefined reference to `_lseek' conftest.c:(.text+0x94): undefined reference to `_access' conftest.c:(.text+0xf4): undefined reference to `_snprintf' conftest.c:(.text+0x130): undefined reference to `sbreak' conftest.c:(.text+0x184): undefined reference to `_set_output_format' conftest.c:(.text+0x190): undefined reference to `PXFGETARG' conftest.c:(.text+0x220): undefined reference to `sysctlbyname' conftest.c:(.text+0x22c): undefined reference to `stricmp' Checking for functions [rand getdomainname realpath dlsym bzero uname usleep dlclose gethostname clock get_nprocs dlerror mkstemp fork getpagesize] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char rand(); char getdomainname(); char realpath(); char dlsym(); char bzero(); char uname(); char usleep(); char dlclose(); char gethostname(); char clock(); char get_nprocs(); char dlerror(); char mkstemp(); char fork(); char getpagesize(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_rand) || defined (__stub___rand) rand_will_always_fail_with_ENOSYS(); #else rand(); #endif #if defined (__stub_getdomainname) || defined (__stub___getdomainname) getdomainname_will_always_fail_with_ENOSYS(); #else getdomainname(); #endif #if defined (__stub_realpath) || defined (__stub___realpath) realpath_will_always_fail_with_ENOSYS(); #else realpath(); #endif #if defined (__stub_dlsym) || defined (__stub___dlsym) dlsym_will_always_fail_with_ENOSYS(); #else dlsym(); #endif #if defined (__stub_bzero) || defined (__stub___bzero) bzero_will_always_fail_with_ENOSYS(); #else bzero(); #endif #if defined (__stub_uname) || defined (__stub___uname) uname_will_always_fail_with_ENOSYS(); #else uname(); #endif #if defined (__stub_usleep) || defined (__stub___usleep) usleep_will_always_fail_with_ENOSYS(); #else usleep(); #endif #if defined (__stub_dlclose) || defined (__stub___dlclose) dlclose_will_always_fail_with_ENOSYS(); #else dlclose(); #endif #if defined (__stub_gethostname) || defined (__stub___gethostname) gethostname_will_always_fail_with_ENOSYS(); #else gethostname(); #endif #if defined (__stub_clock) || defined (__stub___clock) clock_will_always_fail_with_ENOSYS(); #else clock(); #endif #if defined (__stub_get_nprocs) || defined (__stub___get_nprocs) get_nprocs_will_always_fail_with_ENOSYS(); #else get_nprocs(); #endif #if defined (__stub_dlerror) || defined (__stub___dlerror) dlerror_will_always_fail_with_ENOSYS(); #else dlerror(); #endif #if defined (__stub_mkstemp) || defined (__stub___mkstemp) mkstemp_will_always_fail_with_ENOSYS(); #else mkstemp(); #endif #if defined (__stub_fork) || defined (__stub___fork) fork_will_always_fail_with_ENOSYS(); #else fork(); #endif #if defined (__stub_getpagesize) || defined (__stub___getpagesize) getpagesize_will_always_fail_with_ENOSYS(); #else getpagesize(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_RAND" to "1" Defined "HAVE_GETDOMAINNAME" to "1" Defined "HAVE_REALPATH" to "1" Defined "HAVE_DLSYM" to "1" Defined "HAVE_BZERO" to "1" Defined "HAVE_UNAME" to "1" Defined "HAVE_USLEEP" to "1" Defined "HAVE_DLCLOSE" to "1" Defined "HAVE_GETHOSTNAME" to "1" Defined "HAVE_CLOCK" to "1" Defined "HAVE_GET_NPROCS" to "1" Defined "HAVE_DLERROR" to "1" Defined "HAVE_MKSTEMP" to "1" Defined "HAVE_FORK" to "1" Defined "HAVE_GETPAGESIZE" to "1" Checking for functions [memalign sigset gethostbyname gettimeofday readlink sigaction strcasecmp dlopen drand48 socket memmove signal popen getrusage times time] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char memalign(); char sigset(); char gethostbyname(); char gettimeofday(); char readlink(); char sigaction(); char strcasecmp(); char dlopen(); char drand48(); char socket(); char memmove(); char signal(); char popen(); char getrusage(); char times(); char time(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_memalign) || defined (__stub___memalign) memalign_will_always_fail_with_ENOSYS(); #else memalign(); #endif #if defined (__stub_sigset) || defined (__stub___sigset) sigset_will_always_fail_with_ENOSYS(); #else sigset(); #endif #if defined (__stub_gethostbyname) || defined (__stub___gethostbyname) gethostbyname_will_always_fail_with_ENOSYS(); #else gethostbyname(); #endif #if defined (__stub_gettimeofday) || defined (__stub___gettimeofday) gettimeofday_will_always_fail_with_ENOSYS(); #else gettimeofday(); #endif #if defined (__stub_readlink) || defined (__stub___readlink) readlink_will_always_fail_with_ENOSYS(); #else readlink(); #endif #if defined (__stub_sigaction) || defined (__stub___sigaction) sigaction_will_always_fail_with_ENOSYS(); #else sigaction(); #endif #if defined (__stub_strcasecmp) || defined (__stub___strcasecmp) strcasecmp_will_always_fail_with_ENOSYS(); #else strcasecmp(); #endif #if defined (__stub_dlopen) || defined (__stub___dlopen) dlopen_will_always_fail_with_ENOSYS(); #else dlopen(); #endif #if defined (__stub_drand48) || defined (__stub___drand48) drand48_will_always_fail_with_ENOSYS(); #else drand48(); #endif #if defined (__stub_socket) || defined (__stub___socket) socket_will_always_fail_with_ENOSYS(); #else socket(); #endif #if defined (__stub_memmove) || defined (__stub___memmove) memmove_will_always_fail_with_ENOSYS(); #else memmove(); #endif #if defined (__stub_signal) || defined (__stub___signal) signal_will_always_fail_with_ENOSYS(); #else signal(); #endif #if defined (__stub_popen) || defined (__stub___popen) popen_will_always_fail_with_ENOSYS(); #else popen(); #endif #if defined (__stub_getrusage) || defined (__stub___getrusage) getrusage_will_always_fail_with_ENOSYS(); #else getrusage(); #endif #if defined (__stub_times) || defined (__stub___times) times_will_always_fail_with_ENOSYS(); #else times(); #endif #if defined (__stub_time) || defined (__stub___time) time_will_always_fail_with_ENOSYS(); #else time(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_MEMALIGN" to "1" Defined "HAVE_SIGSET" to "1" Defined "HAVE_GETHOSTBYNAME" to "1" Defined "HAVE_GETTIMEOFDAY" to "1" Defined "HAVE_READLINK" to "1" Defined "HAVE_SIGACTION" to "1" Defined "HAVE_STRCASECMP" to "1" Defined "HAVE_DLOPEN" to "1" Defined "HAVE_DRAND48" to "1" Defined "HAVE_SOCKET" to "1" Defined "HAVE_MEMMOVE" to "1" Defined "HAVE_SIGNAL" to "1" Defined "HAVE_POPEN" to "1" Defined "HAVE_GETRUSAGE" to "1" Defined "HAVE_TIMES" to "1" Defined "HAVE_TIME" to "1" Checking for functions [_sleep] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _sleep(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__sleep) || defined (__stub____sleep) _sleep_will_always_fail_with_ENOSYS(); #else _sleep(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `_sleep' Checking for functions [snprintf] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char snprintf(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_snprintf) || defined (__stub___snprintf) snprintf_will_always_fail_with_ENOSYS(); #else snprintf(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_SNPRINTF" to "1" Checking for functions [_getcwd] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _getcwd(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__getcwd) || defined (__stub____getcwd) _getcwd_will_always_fail_with_ENOSYS(); #else _getcwd(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `_getcwd' Checking for functions [getwd] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getwd(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_getwd) || defined (__stub___getwd) getwd_will_always_fail_with_ENOSYS(); #else getwd(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): warning: the `getwd' function is dangerous and should not be used. Defined "HAVE_GETWD" to "1" Checking for functions [_lseek] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _lseek(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__lseek) || defined (__stub____lseek) _lseek_will_always_fail_with_ENOSYS(); #else _lseek(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `_lseek' Checking for functions [sleep] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sleep(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_sleep) || defined (__stub___sleep) sleep_will_always_fail_with_ENOSYS(); #else sleep(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_SLEEP" to "1" Checking for functions [_access] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _access(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__access) || defined (__stub____access) _access_will_always_fail_with_ENOSYS(); #else _access(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `_access' Checking for functions [lseek] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char lseek(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_lseek) || defined (__stub___lseek) lseek_will_always_fail_with_ENOSYS(); #else lseek(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_LSEEK" to "1" Checking for functions [access] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char access(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_access) || defined (__stub___access) access_will_always_fail_with_ENOSYS(); #else access(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_ACCESS" to "1" Checking for functions [_snprintf] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _snprintf(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__snprintf) || defined (__stub____snprintf) _snprintf_will_always_fail_with_ENOSYS(); #else _snprintf(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `_snprintf' Checking for functions [sbreak] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sbreak(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_sbreak) || defined (__stub___sbreak) sbreak_will_always_fail_with_ENOSYS(); #else sbreak(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `sbreak' Checking for functions [getcwd] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getcwd(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_getcwd) || defined (__stub___getcwd) getcwd_will_always_fail_with_ENOSYS(); #else getcwd(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_GETCWD" to "1" Checking for functions [_set_output_format] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _set_output_format(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__set_output_format) || defined (__stub____set_output_format) _set_output_format_will_always_fail_with_ENOSYS(); #else _set_output_format(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `_set_output_format' Checking for functions [PXFGETARG] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char PXFGETARG(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_PXFGETARG) || defined (__stub___PXFGETARG) PXFGETARG_will_always_fail_with_ENOSYS(); #else PXFGETARG(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `PXFGETARG' Checking for functions [sysctlbyname] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sysctlbyname(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_sysctlbyname) || defined (__stub___sysctlbyname) sysctlbyname_will_always_fail_with_ENOSYS(); #else sysctlbyname(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `sysctlbyname' Checking for functions [stricmp] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char stricmp(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_stricmp) || defined (__stub___stricmp) stricmp_will_always_fail_with_ENOSYS(); #else stricmp(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `stricmp' ================================================================================ TEST configureMemorySize from config.utilities.getResidentSetSize(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/getResidentSetSize.py:31) TESTING: configureMemorySize from config.utilities.getResidentSetSize(config/BuildSystem/config/utilities/getResidentSetSize.py:31) Try to determine how to measure the memory usage Defined "USE_PROC_FOR_SIZE" to "1" Using /proc for PetscMemoryGetCurrentUsage() ================================================================================ TEST configureFortranCommandLine from config.utilities.fortranCommandLine(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/fortranCommandLine.py:27) TESTING: configureFortranCommandLine from config.utilities.fortranCommandLine(config/BuildSystem/config/utilities/fortranCommandLine.py:27) Check for the mechanism to retrieve command line arguments in Fortran Pushing language FC Checking for functions [] in library [''] [] Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.F Possible ERROR while running compiler: stderr: Fortran diagnostic messages: program name(main) jwd2005i-w "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.F", line 4: 'i' is used but never set. Source: program main integer i character*(80) arg call get_command_argument(i,arg) end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language FC Defined "HAVE_FORTRAN_GET_COMMAND_ARGUMENT" to "1" Popping language FC Pushing language C Checking for functions [get_command_argument_] in library [''] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char get_command_argument_(); static void _check_get_command_argument_() { get_command_argument_(); } int main() { _check_get_command_argument_();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o: In function `_check_get_command_argument_': conftest.c:(.text+0x4): undefined reference to `get_command_argument_' Popping language C Checking for functions [getarg_] in library [''] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char getarg_(); static void _check_getarg_() { getarg_(); } int main() { _check_getarg_();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o: In function `_check_getarg_': conftest.c:(.text+0x4): undefined reference to `getarg_' Popping language C Checking for functions [ipxfargc_] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char ipxfargc_(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_ipxfargc_) || defined (__stub___ipxfargc_) ipxfargc__will_always_fail_with_ENOSYS(); #else ipxfargc_(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `ipxfargc_' Checking for functions [f90_unix_MP_iargc] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char f90_unix_MP_iargc(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_f90_unix_MP_iargc) || defined (__stub___f90_unix_MP_iargc) f90_unix_MP_iargc_will_always_fail_with_ENOSYS(); #else f90_unix_MP_iargc(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `f90_unix_MP_iargc' Checking for functions [PXFGETARG] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char PXFGETARG(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_PXFGETARG) || defined (__stub___PXFGETARG) PXFGETARG_will_always_fail_with_ENOSYS(); #else PXFGETARG(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `PXFGETARG' Checking for functions [iargc_] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char iargc_(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_iargc_) || defined (__stub___iargc_) iargc__will_always_fail_with_ENOSYS(); #else iargc_(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `iargc_' Checking for functions [GETARG at 16] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Possible ERROR while running compiler: exit code 512 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c", line 13: error: unrecognized token char GETARG at 16(); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c", line 13: error: expected a ";" char GETARG at 16(); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c", line 21: error: unrecognized token #if defined (__stub_GETARG at 16) || defined (__stub___GETARG at 16) ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c", line 21: error: expected a ")" #if defined (__stub_GETARG at 16) || defined (__stub___GETARG at 16) ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c", line 21: error: extra text after expected end of preprocessing directive #if defined (__stub_GETARG at 16) || defined (__stub___GETARG at 16) ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c", line 24: error: unrecognized token GETARG at 16(); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c", line 24: warning: expression has no effect GETARG at 16(); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c", line 24: error: expected a ";" GETARG at 16(); ^ 7 errors detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c". Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char GETARG at 16(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_GETARG at 16) || defined (__stub___GETARG at 16) GETARG at 16_will_always_fail_with_ENOSYS(); #else GETARG at 16(); #endif ; return 0; } Compile failed inside link Checking for functions [_gfortran_iargc] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _gfortran_iargc(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__gfortran_iargc) || defined (__stub____gfortran_iargc) _gfortran_iargc_will_always_fail_with_ENOSYS(); #else _gfortran_iargc(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `_gfortran_iargc' Popping language C ================================================================================ TEST configureFeatureTestMacros from config.utilities.featureTestMacros(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/featureTestMacros.py:13) TESTING: configureFeatureTestMacros from config.utilities.featureTestMacros(config/BuildSystem/config/utilities/featureTestMacros.py:13) Checks if certain feature test macros are support All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros/conftest.c", line 4: catastrophic error: cannot open source file "sysctl.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" #define _POSIX_C_SOURCE 200112L #include int main() { ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #define _BSD_SOURCE #include int main() { ; return 0; } Defined "_BSD_SOURCE" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #define _DEFAULT_SOURCE #include int main() { ; return 0; } Defined "_DEFAULT_SOURCE" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #define _GNU_SOURCE #include int main() { cpu_set_t mset; CPU_ZERO(&mset);; return 0; } Defined "_GNU_SOURCE" to "1" ================================================================================ TEST configureMissingDefines from config.utilities.missing(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/missing.py:57) TESTING: configureMissingDefines from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:57) Checks for limits All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_LIMITS_H #include #endif int main() { int i=INT_MAX; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_FLOAT_H #include #endif int main() { double d=DBL_MAX; if (d); ; return 0; } ================================================================================ TEST configureMissingUtypeTypedefs from config.utilities.missing(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/missing.py:67) TESTING: configureMissingUtypeTypedefs from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:67) Checks if u_short is undefined Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c", line 6: warning: variable "foo" was declared but never referenced u_short foo; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { u_short foo; ; return 0; } ================================================================================ TEST configureMissingFunctions from config.utilities.missing(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/missing.py:73) TESTING: configureMissingFunctions from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:73) Checks for SOCKETS ================================================================================ TEST configureMissingSignals from config.utilities.missing(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/missing.py:93) TESTING: configureMissingSignals from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:93) Check for missing signals, and define MISSING_ if necessary Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGABRT; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGALRM; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGBUS; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGCHLD; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGCONT; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGFPE; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGHUP; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGILL; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGINT; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGKILL; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGPIPE; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGQUIT; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGSEGV; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGSTOP; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGSYS; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGTERM; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGTRAP; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGTSTP; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGURG; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGUSR1; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGUSR2; if (i); ; return 0; } ================================================================================ TEST configureMissingGetdomainnamePrototype from config.utilities.missing(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/missing.py:110) TESTING: configureMissingGetdomainnamePrototype from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:110) Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #if !defined(_BSD_SOURCE) #define _BSD_SOURCE #endif #if !defined(_DEFAULT_SOURCE) #define _DEFAULT_SOURCE #endif #if !defined(_GNU_SOURCE) #define _GNU_SOURCE #endif #ifdef PETSC_HAVE_UNISTD_H #include #endif #ifdef PETSC_HAVE_NETDB_H #include #endif int main() { int (*getdomainname_ptr)(char*,size_t) = getdomainname; char test[10]; if (getdomainname_ptr(test,10)) return 1; ; return 0; } Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #if !defined(_BSD_SOURCE) #define _BSD_SOURCE #endif #if !defined(_DEFAULT_SOURCE) #define _DEFAULT_SOURCE #endif #if !defined(_GNU_SOURCE) #define _GNU_SOURCE #endif #ifdef PETSC_HAVE_UNISTD_H #include #endif #ifdef PETSC_HAVE_NETDB_H #include #endif int main() { int (*getdomainname_ptr)(char*,size_t) = getdomainname; char test[10]; if (getdomainname_ptr(test,10)) return 1; ; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language Cxx ================================================================================ TEST configureMissingSrandPrototype from config.utilities.missing(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/missing.py:135) TESTING: configureMissingSrandPrototype from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:135) Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #if !defined(_BSD_SOURCE) #define _BSD_SOURCE #endif #if !defined(_DEFAULT_SOURCE) #define _DEFAULT_SOURCE #endif #if !defined(_GNU_SOURCE) #define _GNU_SOURCE #endif #ifdef PETSC_HAVE_STDLIB_H #include #endif int main() { double (*drand48_ptr)(void) = drand48; void (*srand48_ptr)(long int) = srand48; long int seed=10; srand48_ptr(seed); if (drand48_ptr() > 0.5) return 1; ; return 0; } Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #if !defined(_BSD_SOURCE) #define _BSD_SOURCE #endif #if !defined(_DEFAULT_SOURCE) #define _DEFAULT_SOURCE #endif #if !defined(_GNU_SOURCE) #define _GNU_SOURCE #endif #ifdef PETSC_HAVE_STDLIB_H #include #endif int main() { double (*drand48_ptr)(void) = drand48; void (*srand48_ptr)(long int) = srand48; long int seed=10; srand48_ptr(seed); if (drand48_ptr() > 0.5) return 1; ; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language Cxx ================================================================================ TEST configureFPTrap from config.utilities.FPTrap(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/FPTrap.py:27) TESTING: configureFPTrap from config.utilities.FPTrap(config/BuildSystem/config/utilities/FPTrap.py:27) Checking the handling of floating point traps Checking for header: sigfpe.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "sigfpe.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "sigfpe.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "sigfpe.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c".: Checking for header: fpxcp.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "fpxcp.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "fpxcp.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "fpxcp.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c".: Checking for header: floatingpoint.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "floatingpoint.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "floatingpoint.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "floatingpoint.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c".: ================================================================================ TEST configureMkdir from config.programs(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/programs.py:22) TESTING: configureMkdir from config.programs(config/BuildSystem/config/programs.py:22) Make sure we can have mkdir automatically make intermediate directories Checking for program /opt/FJSVtclang/check/mkdir...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/mkdir...not found Checking for program /opt/kusu/bin/mkdir...not found Checking for program /opt/kusu/sbin/mkdir...not found Checking for program /usr/pgsql-9.0/bin/mkdir...not found Checking for program /usr/local/bin/mkdir...not found Checking for program /bin/mkdir...found Executing: /bin/mkdir -p .conftest/tmp Adding -p flag to /bin/mkdir -p to automatically create directories Defined make macro "MKDIR" to "/bin/mkdir -p" ================================================================================ TEST configureAutoreconf from config.programs(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/programs.py:44) TESTING: configureAutoreconf from config.programs(config/BuildSystem/config/programs.py:44) Check for autoreconf Checking for program /opt/FJSVtclang/check/autoreconf...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/autoreconf...not found Checking for program /opt/kusu/bin/autoreconf...not found Checking for program /opt/kusu/sbin/autoreconf...not found Checking for program /usr/pgsql-9.0/bin/autoreconf...not found Checking for program /usr/local/bin/autoreconf...not found Checking for program /bin/autoreconf...not found Checking for program /usr/bin/autoreconf...found All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.programs Executing: cd /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.programs/autoconfdir&&/usr/bin/autoreconf autoreconf test successful! ================================================================================ TEST configurePrograms from config.programs(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/programs.py:66) TESTING: configurePrograms from config.programs(config/BuildSystem/config/programs.py:66) Check for the programs needed to build and run PETSc Checking for program /opt/FJSVtclang/check/sh...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/sh...not found Checking for program /opt/kusu/bin/sh...not found Checking for program /opt/kusu/sbin/sh...not found Checking for program /usr/pgsql-9.0/bin/sh...not found Checking for program /usr/local/bin/sh...not found Checking for program /bin/sh...found Defined make macro "SHELL" to "/bin/sh" Checking for program /opt/FJSVtclang/check/sed...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/sed...not found Checking for program /opt/kusu/bin/sed...not found Checking for program /opt/kusu/sbin/sed...not found Checking for program /usr/pgsql-9.0/bin/sed...not found Checking for program /usr/local/bin/sed...not found Checking for program /bin/sed...found Defined make macro "SED" to "/bin/sed" Executing: /bin/sed -i s/sed/sd/g "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.programs/sed1" Adding SEDINPLACE cmd: /bin/sed -i Defined make macro "SEDINPLACE" to "/bin/sed -i" Checking for program /opt/FJSVtclang/check/mv...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/mv...not found Checking for program /opt/kusu/bin/mv...not found Checking for program /opt/kusu/sbin/mv...not found Checking for program /usr/pgsql-9.0/bin/mv...not found Checking for program /usr/local/bin/mv...not found Checking for program /bin/mv...found Defined make macro "MV" to "/bin/mv" Checking for program /opt/FJSVtclang/check/cp...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/cp...not found Checking for program /opt/kusu/bin/cp...not found Checking for program /opt/kusu/sbin/cp...not found Checking for program /usr/pgsql-9.0/bin/cp...not found Checking for program /usr/local/bin/cp...not found Checking for program /bin/cp...found Defined make macro "CP" to "/bin/cp" Checking for program /opt/FJSVtclang/check/grep...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/grep...not found Checking for program /opt/kusu/bin/grep...not found Checking for program /opt/kusu/sbin/grep...not found Checking for program /usr/pgsql-9.0/bin/grep...not found Checking for program /usr/local/bin/grep...not found Checking for program /bin/grep...found Defined make macro "GREP" to "/bin/grep" Checking for program /opt/FJSVtclang/check/rm...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/rm...not found Checking for program /opt/kusu/bin/rm...not found Checking for program /opt/kusu/sbin/rm...not found Checking for program /usr/pgsql-9.0/bin/rm...not found Checking for program /usr/local/bin/rm...not found Checking for program /bin/rm...found Defined make macro "RM" to "/bin/rm -f" Checking for program /opt/FJSVtclang/check/diff...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/diff...not found Checking for program /opt/kusu/bin/diff...not found Checking for program /opt/kusu/sbin/diff...not found Checking for program /usr/pgsql-9.0/bin/diff...not found Checking for program /usr/local/bin/diff...not found Checking for program /bin/diff...not found Checking for program /usr/bin/diff...found Executing: "/usr/bin/diff" -w "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.programs/diff1" "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.programs/diff2" Defined make macro "DIFF" to "/usr/bin/diff -w" Checking for program /usr/ucb/ps...not found Checking for program /usr/usb/ps...not found Checking for program /home/hp150306/t00196/ps...not found Checking for program /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/bin/win32fe/ps...not found Checking for program /opt/FJSVtclang/check/gzip...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/gzip...not found Checking for program /opt/kusu/bin/gzip...not found Checking for program /opt/kusu/sbin/gzip...not found Checking for program /usr/pgsql-9.0/bin/gzip...not found Checking for program /usr/local/bin/gzip...not found Checking for program /bin/gzip...found Defined make macro "GZIP" to "/bin/gzip" Defined "HAVE_GZIP" to "1" Defined make macro "PYTHON" to "/usr/bin/python" ================================================================================ TEST configureMake from config.packages.make(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/make.py:66) TESTING: configureMake from config.packages.make(config/BuildSystem/config/packages/make.py:66) Check for user specified make - or gmake, make Checking for program /opt/FJSVtclang/check/gmake...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/gmake...not found Checking for program /opt/kusu/bin/gmake...not found Checking for program /opt/kusu/sbin/gmake...not found Checking for program /usr/pgsql-9.0/bin/gmake...not found Checking for program /usr/local/bin/gmake...not found Checking for program /bin/gmake...not found Checking for program /usr/bin/gmake...found Defined make macro "MAKE" to "/usr/bin/gmake" ================================================================================ TEST configureCheckGNUMake from config.packages.make(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/make.py:84) TESTING: configureCheckGNUMake from config.packages.make(config/BuildSystem/config/packages/make.py:84) Check for GNU make Executing: /usr/bin/gmake --version stdout: GNU Make 3.81 Copyright (C) 2006 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. This program built for sparc64-unknown-linux-gnu Defined make macro "MAKE_IS_GNUMAKE" to "1" Defined make rule "libc" with dependencies "${LIBNAME}(${OBJSC})" and code [] Defined make rule "libcxx" with dependencies "${LIBNAME}(${OBJSCXX})" and code [] Defined make rule "libcu" with dependencies "${LIBNAME}(${OBJSCU})" and code [] Defined make rule "libf" with dependencies "${OBJSF}" and code -${AR} ${AR_FLAGS} ${LIBNAME} ${OBJSF} ================================================================================ TEST configureMakeNP from config.packages.make(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/make.py:119) TESTING: configureMakeNP from config.packages.make(config/BuildSystem/config/packages/make.py:119) check no of cores on the build machine [perhaps to do make '-j ncores'] module multiprocessing found 8 cores: using make_np = 7 Defined make macro "MAKE_NP" to "7" Defined make macro "OMAKE_PRINTDIR " to "/usr/bin/gmake --print-directory" Defined make macro "OMAKE" to "/usr/bin/gmake --no-print-directory" ================================================================================ TEST alternateConfigureLibrary from config.packages.OpenMPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.OpenMPI(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.MPICH(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.MPICH(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default Pushing language C ================================================================================ TEST configureLibrary from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:476) TESTING: configureLibrary from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:476) Calls the regular package configureLibrary and then does an additional test needed by MPI ================================================================================== Checking for a functional MPI Checking for library in Compiler specific search MPI: [] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [MPI_Init MPI_Comm_create] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Init(); static void _check_MPI_Init() { MPI_Init(); } char MPI_Comm_create(); static void _check_MPI_Comm_create() { MPI_Comm_create(); } int main() { _check_MPI_Init(); _check_MPI_Comm_create();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Checking for headers Compiler specific search MPI: [] Pushing language C ================================================================================ TEST checkInclude from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['mpi.h'] in [] Checking include with compiler flags var CPPFLAGS [] Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 212 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef long ptrdiff_t; #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef int wchar_t; #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 225 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 1 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi_portable_platform.h" #line 343 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi_portable_platform.h" #line 386 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi_portable_platform.h" #line 258 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 278 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" typedef ptrdiff_t MPI_Aint; typedef long long MPI_Offset; typedef struct ompi_communicator_t *MPI_Comm; typedef struct ompi_datatype_t *MPI_Datatype; typedef struct ompi_errhandler_t *MPI_Errhandler; typedef struct ompi_file_t *MPI_File; typedef struct ompi_group_t *MPI_Group; typedef struct ompi_info_t *MPI_Info; typedef struct ompi_op_t *MPI_Op; typedef struct ompi_request_t *MPI_Request; typedef struct ompi_message_t *MPI_Message; typedef struct ompi_status_public_t MPI_Status; typedef struct ompi_win_t *MPI_Win; #pragma pack(4) struct ompi_status_public_t { int MPI_SOURCE; int MPI_TAG; int MPI_ERROR; unsigned long _cancelled : 1; unsigned long _ucount : 63; }; #pragma pack() typedef struct ompi_status_public_t ompi_status_public_t; typedef int (MPI_Copy_function)(MPI_Comm, int, void *, void *, void *, int *); typedef int (MPI_Delete_function)(MPI_Comm, int, void *, void *); typedef int (MPI_Datarep_extent_function)(MPI_Datatype, MPI_Aint *, void *); typedef int (MPI_Datarep_conversion_function)(void *, MPI_Datatype, int, void *, MPI_Offset, void *); typedef void (MPI_Comm_errhandler_function)(MPI_Comm *, int *, ...); typedef MPI_Comm_errhandler_function MPI_Comm_errhandler_fn ; typedef void (ompi_file_errhandler_fn)(MPI_File *, int *, ...); typedef ompi_file_errhandler_fn MPI_File_errhandler_fn ; typedef ompi_file_errhandler_fn MPI_File_errhandler_function; typedef void (MPI_Win_errhandler_function)(MPI_Win *, int *, ...); typedef MPI_Win_errhandler_function MPI_Win_errhandler_fn ; typedef void (MPI_Handler_function)(MPI_Comm *, int *, ...); typedef void (MPI_User_function)(void *, void *, int *, MPI_Datatype *); typedef int (MPI_Comm_copy_attr_function)(MPI_Comm, int, void *, void *, void *, int *); typedef int (MPI_Comm_delete_attr_function)(MPI_Comm, int, void *, void *); typedef int (MPI_Type_copy_attr_function)(MPI_Datatype, int, void *, void *, void *, int *); typedef int (MPI_Type_delete_attr_function)(MPI_Datatype, int, void *, void *); typedef int (MPI_Win_copy_attr_function)(MPI_Win, int, void *, void *, void *, int *); typedef int (MPI_Win_delete_attr_function)(MPI_Win, int, void *, void *); typedef int (MPI_Grequest_query_function)(void *, MPI_Status *); typedef int (MPI_Grequest_free_function)(void *); typedef int (MPI_Grequest_cancel_function)(void *, int); #line 432 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 453 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 469 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" enum { MPI_TAG_UB, MPI_HOST, MPI_IO, MPI_WTIME_IS_GLOBAL, MPI_APPNUM, MPI_LASTUSEDCODE, MPI_UNIVERSE_SIZE, MPI_WIN_BASE, MPI_WIN_SIZE, MPI_WIN_DISP_UNIT, IMPI_CLIENT_SIZE, IMPI_CLIENT_COLOR, IMPI_HOST_SIZE, IMPI_HOST_COLOR }; #line 582 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" enum { MPI_IDENT, MPI_CONGRUENT, MPI_SIMILAR, MPI_UNEQUAL }; enum { MPI_THREAD_SINGLE, MPI_THREAD_FUNNELED, MPI_THREAD_SERIALIZED, MPI_THREAD_MULTIPLE }; enum { MPI_COMBINER_NAMED, MPI_COMBINER_DUP, MPI_COMBINER_CONTIGUOUS, MPI_COMBINER_VECTOR, MPI_COMBINER_HVECTOR_INTEGER, MPI_COMBINER_HVECTOR, MPI_COMBINER_INDEXED, MPI_COMBINER_HINDEXED_INTEGER, MPI_COMBINER_HINDEXED, MPI_COMBINER_INDEXED_BLOCK, MPI_COMBINER_STRUCT_INTEGER, MPI_COMBINER_STRUCT, MPI_COMBINER_SUBARRAY, MPI_COMBINER_DARRAY, MPI_COMBINER_F90_REAL, MPI_COMBINER_F90_COMPLEX, MPI_COMBINER_F90_INTEGER, MPI_COMBINER_RESIZED, MPI_COMBINER_HINDEXED_BLOCK }; #line 649 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" int OMPI_C_MPI_TYPE_NULL_DELETE_FN( MPI_Datatype datatype, int type_keyval, void* attribute_val_out, void* extra_state ); int OMPI_C_MPI_TYPE_NULL_COPY_FN( MPI_Datatype datatype, int type_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); int OMPI_C_MPI_TYPE_DUP_FN( MPI_Datatype datatype, int type_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); int OMPI_C_MPI_COMM_NULL_DELETE_FN( MPI_Comm comm, int comm_keyval, void* attribute_val_out, void* extra_state ); int OMPI_C_MPI_COMM_NULL_COPY_FN( MPI_Comm comm, int comm_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); int OMPI_C_MPI_COMM_DUP_FN( MPI_Comm comm, int comm_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); int OMPI_C_MPI_NULL_DELETE_FN( MPI_Comm comm, int comm_keyval, void* attribute_val_out, void* extra_state ) ; int OMPI_C_MPI_NULL_COPY_FN( MPI_Comm comm, int comm_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ) ; int OMPI_C_MPI_DUP_FN( MPI_Comm comm, int comm_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ) ; int OMPI_C_MPI_WIN_NULL_DELETE_FN( MPI_Win window, int win_keyval, void* attribute_val_out, void* extra_state ); int OMPI_C_MPI_WIN_NULL_COPY_FN( MPI_Win window, int win_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); int OMPI_C_MPI_WIN_DUP_FN( MPI_Win window, int win_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); extern struct ompi_predefined_communicator_t ompi_mpi_comm_world; extern struct ompi_predefined_communicator_t ompi_mpi_comm_self; extern struct ompi_predefined_communicator_t ompi_mpi_comm_null; extern struct ompi_predefined_group_t ompi_mpi_group_empty; extern struct ompi_predefined_group_t ompi_mpi_group_null; extern struct ompi_predefined_request_t ompi_request_null; extern struct ompi_predefined_message_t ompi_message_null; extern struct ompi_predefined_message_t ompi_message_no_proc; extern struct ompi_predefined_op_t ompi_mpi_op_null; extern struct ompi_predefined_op_t ompi_mpi_op_min; extern struct ompi_predefined_op_t ompi_mpi_op_max; extern struct ompi_predefined_op_t ompi_mpi_op_sum; extern struct ompi_predefined_op_t ompi_mpi_op_prod; extern struct ompi_predefined_op_t ompi_mpi_op_land; extern struct ompi_predefined_op_t ompi_mpi_op_band; extern struct ompi_predefined_op_t ompi_mpi_op_lor; extern struct ompi_predefined_op_t ompi_mpi_op_bor; extern struct ompi_predefined_op_t ompi_mpi_op_lxor; extern struct ompi_predefined_op_t ompi_mpi_op_bxor; extern struct ompi_predefined_op_t ompi_mpi_op_maxloc; extern struct ompi_predefined_op_t ompi_mpi_op_minloc; extern struct ompi_predefined_op_t ompi_mpi_op_replace; extern struct ompi_predefined_datatype_t ompi_mpi_datatype_null; extern struct ompi_predefined_datatype_t ompi_mpi_lb ; extern struct ompi_predefined_datatype_t ompi_mpi_ub ; extern struct ompi_predefined_datatype_t ompi_mpi_char; extern struct ompi_predefined_datatype_t ompi_mpi_signed_char; extern struct ompi_predefined_datatype_t ompi_mpi_unsigned_char; extern struct ompi_predefined_datatype_t ompi_mpi_byte; extern struct ompi_predefined_datatype_t ompi_mpi_short; extern struct ompi_predefined_datatype_t ompi_mpi_unsigned_short; extern struct ompi_predefined_datatype_t ompi_mpi_int; extern struct ompi_predefined_datatype_t ompi_mpi_unsigned; extern struct ompi_predefined_datatype_t ompi_mpi_long; extern struct ompi_predefined_datatype_t ompi_mpi_unsigned_long; extern struct ompi_predefined_datatype_t ompi_mpi_long_long_int; extern struct ompi_predefined_datatype_t ompi_mpi_unsigned_long_long; extern struct ompi_predefined_datatype_t ompi_mpi_float; extern struct ompi_predefined_datatype_t ompi_mpi_double; extern struct ompi_predefined_datatype_t ompi_mpi_long_double; extern struct ompi_predefined_datatype_t ompi_mpi_wchar; extern struct ompi_predefined_datatype_t ompi_mpi_packed; extern struct ompi_predefined_datatype_t ompi_mpi_cxx_bool; extern struct ompi_predefined_datatype_t ompi_mpi_cxx_cplex; extern struct ompi_predefined_datatype_t ompi_mpi_cxx_dblcplex; extern struct ompi_predefined_datatype_t ompi_mpi_cxx_ldblcplex; extern struct ompi_predefined_datatype_t ompi_mpi_logic; extern struct ompi_predefined_datatype_t ompi_mpi_character; extern struct ompi_predefined_datatype_t ompi_mpi_integer; extern struct ompi_predefined_datatype_t ompi_mpi_real; extern struct ompi_predefined_datatype_t ompi_mpi_dblprec; extern struct ompi_predefined_datatype_t ompi_mpi_cplex; extern struct ompi_predefined_datatype_t ompi_mpi_dblcplex; extern struct ompi_predefined_datatype_t ompi_mpi_ldblcplex; extern struct ompi_predefined_datatype_t ompi_mpi_2int; extern struct ompi_predefined_datatype_t ompi_mpi_2integer; extern struct ompi_predefined_datatype_t ompi_mpi_2real; extern struct ompi_predefined_datatype_t ompi_mpi_2dblprec; extern struct ompi_predefined_datatype_t ompi_mpi_2cplex; extern struct ompi_predefined_datatype_t ompi_mpi_2dblcplex; extern struct ompi_predefined_datatype_t ompi_mpi_float_int; extern struct ompi_predefined_datatype_t ompi_mpi_double_int; extern struct ompi_predefined_datatype_t ompi_mpi_longdbl_int; extern struct ompi_predefined_datatype_t ompi_mpi_short_int; extern struct ompi_predefined_datatype_t ompi_mpi_long_int; extern struct ompi_predefined_datatype_t ompi_mpi_logical1; extern struct ompi_predefined_datatype_t ompi_mpi_logical2; extern struct ompi_predefined_datatype_t ompi_mpi_logical4; extern struct ompi_predefined_datatype_t ompi_mpi_logical8; extern struct ompi_predefined_datatype_t ompi_mpi_integer1; extern struct ompi_predefined_datatype_t ompi_mpi_integer2; extern struct ompi_predefined_datatype_t ompi_mpi_integer4; extern struct ompi_predefined_datatype_t ompi_mpi_integer8; extern struct ompi_predefined_datatype_t ompi_mpi_integer16; extern struct ompi_predefined_datatype_t ompi_mpi_real2; extern struct ompi_predefined_datatype_t ompi_mpi_real4; extern struct ompi_predefined_datatype_t ompi_mpi_real8; extern struct ompi_predefined_datatype_t ompi_mpi_real16; extern struct ompi_predefined_datatype_t ompi_mpi_complex8; extern struct ompi_predefined_datatype_t ompi_mpi_complex16; extern struct ompi_predefined_datatype_t ompi_mpi_complex32; extern struct ompi_predefined_datatype_t ompi_mpi_int8_t; extern struct ompi_predefined_datatype_t ompi_mpi_uint8_t; extern struct ompi_predefined_datatype_t ompi_mpi_int16_t; extern struct ompi_predefined_datatype_t ompi_mpi_uint16_t; extern struct ompi_predefined_datatype_t ompi_mpi_int32_t; extern struct ompi_predefined_datatype_t ompi_mpi_uint32_t; extern struct ompi_predefined_datatype_t ompi_mpi_int64_t; extern struct ompi_predefined_datatype_t ompi_mpi_uint64_t; extern struct ompi_predefined_datatype_t ompi_mpi_aint; extern struct ompi_predefined_datatype_t ompi_mpi_offset; extern struct ompi_predefined_datatype_t ompi_mpi_c_bool; extern struct ompi_predefined_datatype_t ompi_mpi_c_complex; extern struct ompi_predefined_datatype_t ompi_mpi_c_float_complex; extern struct ompi_predefined_datatype_t ompi_mpi_c_double_complex; extern struct ompi_predefined_datatype_t ompi_mpi_c_long_double_complex; extern struct ompi_predefined_errhandler_t ompi_mpi_errhandler_null; extern struct ompi_predefined_errhandler_t ompi_mpi_errors_are_fatal; extern struct ompi_predefined_errhandler_t ompi_mpi_errors_return; extern struct ompi_predefined_win_t ompi_mpi_win_null; extern struct ompi_predefined_file_t ompi_mpi_file_null; extern struct ompi_predefined_info_t ompi_mpi_info_null; extern int *MPI_F_STATUS_IGNORE; extern int *MPI_F_STATUSES_IGNORE; #line 921 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 954 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 1011 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 1038 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" int MPI_Abort(MPI_Comm comm, int errorcode); int MPI_Accumulate(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Op op, MPI_Win win); int MPI_Add_error_class(int *errorclass); int MPI_Add_error_code(int errorclass, int *errorcode); int MPI_Add_error_string(int errorcode, char *string); int MPI_Address(void *location, MPI_Aint *address) ; int MPI_Allgather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm); int MPI_Iallgather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int MPI_Allgatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, MPI_Comm comm); int MPI_Iallgatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int MPI_Alloc_mem(MPI_Aint size, MPI_Info info, void *baseptr); int MPI_Allreduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int MPI_Iallreduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int MPI_Alltoall(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm); int MPI_Ialltoall(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int MPI_Alltoallv(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype recvtype, MPI_Comm comm); int MPI_Ialltoallv(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int MPI_Alltoallw(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype *sendtypes, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype *recvtypes, MPI_Comm comm); int MPI_Ialltoallw(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype *sendtypes, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype *recvtypes, MPI_Comm comm, MPI_Request *request); int MPI_Attr_delete(MPI_Comm comm, int keyval) ; int MPI_Attr_get(MPI_Comm comm, int keyval, void *attribute_val, int *flag) ; int MPI_Attr_put(MPI_Comm comm, int keyval, void *attribute_val) ; int MPI_Barrier(MPI_Comm comm); int MPI_Ibarrier(MPI_Comm comm, MPI_Request *request); int MPI_Bcast(void *buffer, int count, MPI_Datatype datatype, int root, MPI_Comm comm); int MPI_Bsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int MPI_Ibcast(void *buffer, int count, MPI_Datatype datatype, int root, MPI_Comm comm, MPI_Request *request); int MPI_Bsend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Buffer_attach(void *buffer, int size); int MPI_Buffer_detach(void *buffer, int *size); int MPI_Cancel(MPI_Request *request); int MPI_Cart_coords(MPI_Comm comm, int rank, int maxdims, int *coords); int MPI_Cart_create(MPI_Comm old_comm, int ndims, int *dims, int *periods, int reorder, MPI_Comm *comm_cart); int MPI_Cart_get(MPI_Comm comm, int maxdims, int *dims, int *periods, int *coords); int MPI_Cart_map(MPI_Comm comm, int ndims, int *dims, int *periods, int *newrank); int MPI_Cart_rank(MPI_Comm comm, int *coords, int *rank); int MPI_Cart_shift(MPI_Comm comm, int direction, int disp, int *rank_source, int *rank_dest); int MPI_Cart_sub(MPI_Comm comm, int *remain_dims, MPI_Comm *new_comm); int MPI_Cartdim_get(MPI_Comm comm, int *ndims); int MPI_Close_port(char *port_name); int MPI_Comm_accept(char *port_name, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *newcomm); int MPI_Comm_c2f(MPI_Comm comm); int MPI_Comm_call_errhandler(MPI_Comm comm, int errorcode); int MPI_Comm_compare(MPI_Comm comm1, MPI_Comm comm2, int *result); int MPI_Comm_connect(char *port_name, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *newcomm); int MPI_Comm_create_errhandler(MPI_Comm_errhandler_function *function, MPI_Errhandler *errhandler); int MPI_Comm_create_keyval(MPI_Comm_copy_attr_function *comm_copy_attr_fn, MPI_Comm_delete_attr_function *comm_delete_attr_fn, int *comm_keyval, void *extra_state); int MPI_Comm_create(MPI_Comm comm, MPI_Group group, MPI_Comm *newcomm); int MPI_Comm_delete_attr(MPI_Comm comm, int comm_keyval); int MPI_Comm_disconnect(MPI_Comm *comm); int MPI_Comm_dup(MPI_Comm comm, MPI_Comm *newcomm); MPI_Comm MPI_Comm_f2c(int comm); int MPI_Comm_free_keyval(int *comm_keyval); int MPI_Comm_free(MPI_Comm *comm); int MPI_Comm_get_attr(MPI_Comm comm, int comm_keyval, void *attribute_val, int *flag); int MPI_Dist_graph_create(MPI_Comm comm_old, int n, int nodes[], int degrees[], int targets[], int weights[], MPI_Info info, int reorder, MPI_Comm * newcomm); int MPI_Dist_graph_create_adjacent(MPI_Comm comm_old, int indegree, int sources[], int sourceweights[], int outdegree, int destinations[], int destweights[], MPI_Info info, int reorder, MPI_Comm *comm_dist_graph); int MPI_Dist_graph_neighbors(MPI_Comm comm, int maxindegree, int sources[], int sourceweights[], int maxoutdegree, int destinations[], int destweights[]); int MPI_Dist_graph_neighbors_count(MPI_Comm comm, int *inneighbors, int *outneighbors, int *weighted); int MPI_Comm_get_errhandler(MPI_Comm comm, MPI_Errhandler *erhandler); int MPI_Comm_get_name(MPI_Comm comm, char *comm_name, int *resultlen); int MPI_Comm_get_parent(MPI_Comm *parent); int MPI_Comm_group(MPI_Comm comm, MPI_Group *group); int MPI_Comm_join(int fd, MPI_Comm *intercomm); int MPI_Comm_rank(MPI_Comm comm, int *rank); int MPI_Comm_remote_group(MPI_Comm comm, MPI_Group *group); int MPI_Comm_remote_size(MPI_Comm comm, int *size); int MPI_Comm_set_attr(MPI_Comm comm, int comm_keyval, void *attribute_val); int MPI_Comm_set_errhandler(MPI_Comm comm, MPI_Errhandler errhandler); int MPI_Comm_set_name(MPI_Comm comm, char *comm_name); int MPI_Comm_size(MPI_Comm comm, int *size); int MPI_Comm_spawn(char *command, char **argv, int maxprocs, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *intercomm, int *array_of_errcodes); int MPI_Comm_spawn_multiple(int count, char **array_of_commands, char ***array_of_argv, int *array_of_maxprocs, MPI_Info *array_of_info, int root, MPI_Comm comm, MPI_Comm *intercomm, int *array_of_errcodes); int MPI_Comm_split(MPI_Comm comm, int color, int key, MPI_Comm *newcomm); int MPI_Comm_test_inter(MPI_Comm comm, int *flag); int MPI_Dims_create(int nnodes, int ndims, int *dims); int MPI_Errhandler_c2f(MPI_Errhandler errhandler); int MPI_Errhandler_create(MPI_Handler_function *function, MPI_Errhandler *errhandler) ; MPI_Errhandler MPI_Errhandler_f2c(int errhandler); int MPI_Errhandler_free(MPI_Errhandler *errhandler); int MPI_Errhandler_get(MPI_Comm comm, MPI_Errhandler *errhandler) ; int MPI_Errhandler_set(MPI_Comm comm, MPI_Errhandler errhandler) ; int MPI_Error_class(int errorcode, int *errorclass); int MPI_Error_string(int errorcode, char *string, int *resultlen); int MPI_Exscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int MPI_Iexscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int MPI_File_c2f(MPI_File file); MPI_File MPI_File_f2c(int file); int MPI_File_call_errhandler(MPI_File fh, int errorcode); int MPI_File_create_errhandler(MPI_File_errhandler_function *function, MPI_Errhandler *errhandler); int MPI_File_set_errhandler( MPI_File file, MPI_Errhandler errhandler); int MPI_File_get_errhandler( MPI_File file, MPI_Errhandler *errhandler); int MPI_File_open(MPI_Comm comm, char *filename, int amode, MPI_Info info, MPI_File *fh); int MPI_File_close(MPI_File *fh); int MPI_File_delete(char *filename, MPI_Info info); int MPI_File_set_size(MPI_File fh, MPI_Offset size); int MPI_File_preallocate(MPI_File fh, MPI_Offset size); int MPI_File_get_size(MPI_File fh, MPI_Offset *size); int MPI_File_get_group(MPI_File fh, MPI_Group *group); int MPI_File_get_amode(MPI_File fh, int *amode); int MPI_File_set_info(MPI_File fh, MPI_Info info); int MPI_File_get_info(MPI_File fh, MPI_Info *info_used); int MPI_File_set_view(MPI_File fh, MPI_Offset disp, MPI_Datatype etype, MPI_Datatype filetype, char *datarep, MPI_Info info); int MPI_File_get_view(MPI_File fh, MPI_Offset *disp, MPI_Datatype *etype, MPI_Datatype *filetype, char *datarep); int MPI_File_read_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_read_at_all(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write_at_all(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_iread_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_iwrite_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_read(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_read_all(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write_all(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_iread(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_iwrite(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_seek(MPI_File fh, MPI_Offset offset, int whence); int MPI_File_get_position(MPI_File fh, MPI_Offset *offset); int MPI_File_get_byte_offset(MPI_File fh, MPI_Offset offset, MPI_Offset *disp); int MPI_File_read_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_iread_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_iwrite_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_read_ordered(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write_ordered(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_seek_shared(MPI_File fh, MPI_Offset offset, int whence); int MPI_File_get_position_shared(MPI_File fh, MPI_Offset *offset); int MPI_File_read_at_all_begin(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype); int MPI_File_read_at_all_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_write_at_all_begin(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype); int MPI_File_write_at_all_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_read_all_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int MPI_File_read_all_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_write_all_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int MPI_File_write_all_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_read_ordered_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int MPI_File_read_ordered_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_write_ordered_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int MPI_File_write_ordered_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_get_type_extent(MPI_File fh, MPI_Datatype datatype, MPI_Aint *extent); int MPI_File_set_atomicity(MPI_File fh, int flag); int MPI_File_get_atomicity(MPI_File fh, int *flag); int MPI_File_sync(MPI_File fh); int MPI_Finalize(void); int MPI_Finalized(int *flag); int MPI_Free_mem(void *base); int MPI_Gather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int MPI_Igather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int MPI_Gatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, int root, MPI_Comm comm); int MPI_Igatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int MPI_Get_address(void *location, MPI_Aint *address); int MPI_Get_count(MPI_Status *status, MPI_Datatype datatype, int *count); int MPI_Get_elements(MPI_Status *status, MPI_Datatype datatype, int *count); int MPI_Get(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Win win); int MPI_Get_processor_name(char *name, int *resultlen); int MPI_Get_version(int *version, int *subversion); int MPI_Graph_create(MPI_Comm comm_old, int nnodes, int *index, int *edges, int reorder, MPI_Comm *comm_graph); int MPI_Graph_get(MPI_Comm comm, int maxindex, int maxedges, int *index, int *edges); int MPI_Graph_map(MPI_Comm comm, int nnodes, int *index, int *edges, int *newrank); int MPI_Graph_neighbors_count(MPI_Comm comm, int rank, int *nneighbors); int MPI_Graph_neighbors(MPI_Comm comm, int rank, int maxneighbors, int *neighbors); int MPI_Graphdims_get(MPI_Comm comm, int *nnodes, int *nedges); int MPI_Grequest_complete(MPI_Request request); int MPI_Grequest_start(MPI_Grequest_query_function *query_fn, MPI_Grequest_free_function *free_fn, MPI_Grequest_cancel_function *cancel_fn, void *extra_state, MPI_Request *request); int MPI_Group_c2f(MPI_Group group); int MPI_Group_compare(MPI_Group group1, MPI_Group group2, int *result); int MPI_Group_difference(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int MPI_Group_excl(MPI_Group group, int n, int *ranks, MPI_Group *newgroup); MPI_Group MPI_Group_f2c(int group); int MPI_Group_free(MPI_Group *group); int MPI_Group_incl(MPI_Group group, int n, int *ranks, MPI_Group *newgroup); int MPI_Group_intersection(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int MPI_Group_range_excl(MPI_Group group, int n, int ranges[][3], MPI_Group *newgroup); int MPI_Group_range_incl(MPI_Group group, int n, int ranges[][3], MPI_Group *newgroup); int MPI_Group_rank(MPI_Group group, int *rank); int MPI_Group_size(MPI_Group group, int *size); int MPI_Group_translate_ranks(MPI_Group group1, int n, int *ranks1, MPI_Group group2, int *ranks2); int MPI_Group_union(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int MPI_Ibsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Improbe(int source, int tag, MPI_Comm comm, int *flag, MPI_Message *message, MPI_Status *status); int MPI_Imrecv(void *buf, int count, MPI_Datatype type, MPI_Message *message, MPI_Request *request); int MPI_Info_c2f(MPI_Info info); int MPI_Info_create(MPI_Info *info); int MPI_Info_delete(MPI_Info info, char *key); int MPI_Info_dup(MPI_Info info, MPI_Info *newinfo); MPI_Info MPI_Info_f2c(int info); int MPI_Info_free(MPI_Info *info); int MPI_Info_get(MPI_Info info, char *key, int valuelen, char *value, int *flag); int MPI_Info_get_nkeys(MPI_Info info, int *nkeys); int MPI_Info_get_nthkey(MPI_Info info, int n, char *key); int MPI_Info_get_valuelen(MPI_Info info, char *key, int *valuelen, int *flag); int MPI_Info_set(MPI_Info info, char *key, char *value); int MPI_Init(int *argc, char ***argv); int MPI_Initialized(int *flag); int MPI_Init_thread(int *argc, char ***argv, int required, int *provided); int MPI_Intercomm_create(MPI_Comm local_comm, int local_leader, MPI_Comm bridge_comm, int remote_leader, int tag, MPI_Comm *newintercomm); int MPI_Intercomm_merge(MPI_Comm intercomm, int high, MPI_Comm *newintercomm); int MPI_Iprobe(int source, int tag, MPI_Comm comm, int *flag, MPI_Status *status); int MPI_Irecv(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Irsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Isend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Issend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Is_thread_main(int *flag); int MPI_Keyval_create(MPI_Copy_function *copy_fn, MPI_Delete_function *delete_fn, int *keyval, void *extra_state) ; int MPI_Keyval_free(int *keyval) ; int MPI_Lookup_name(char *service_name, MPI_Info info, char *port_name); int MPI_Message_c2f(MPI_Message message); MPI_Message MPI_Message_f2c(int message); int MPI_Mprobe(int source, int tag, MPI_Comm comm, MPI_Message *message, MPI_Status *status); int MPI_Mrecv(void *buf, int count, MPI_Datatype type, MPI_Message *message, MPI_Status *status); int MPI_Op_c2f(MPI_Op op); int MPI_Op_commutative(MPI_Op op, int *commute); int MPI_Op_create(MPI_User_function *function, int commute, MPI_Op *op); int MPI_Open_port(MPI_Info info, char *port_name); MPI_Op MPI_Op_f2c(int op); int MPI_Op_free(MPI_Op *op); int MPI_Pack_external(char *datarep, void *inbuf, int incount, MPI_Datatype datatype, void *outbuf, MPI_Aint outsize, MPI_Aint *position); int MPI_Pack_external_size(char *datarep, int incount, MPI_Datatype datatype, MPI_Aint *size); int MPI_Pack(void *inbuf, int incount, MPI_Datatype datatype, void *outbuf, int outsize, int *position, MPI_Comm comm); int MPI_Pack_size(int incount, MPI_Datatype datatype, MPI_Comm comm, int *size); int MPI_Pcontrol(const int level, ...); int MPI_Probe(int source, int tag, MPI_Comm comm, MPI_Status *status); int MPI_Publish_name(char *service_name, MPI_Info info, char *port_name); int MPI_Put(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Win win); int MPI_Query_thread(int *provided); int MPI_Recv_init(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Recv(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Status *status); int MPI_Reduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, int root, MPI_Comm comm); int MPI_Ireduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, int root, MPI_Comm comm, MPI_Request *request); int MPI_Reduce_local(void *inbuf, void *inoutbuf, int count, MPI_Datatype datatype, MPI_Op op); int MPI_Reduce_scatter(void *sendbuf, void *recvbuf, int *recvcounts, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int MPI_Ireduce_scatter(void *sendbuf, void *recvbuf, int *recvcounts, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int MPI_Reduce_scatter_block(void *sendbuf, void *recvbuf, int recvcount, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int MPI_Ireduce_scatter_block(void *sendbuf, void *recvbuf, int recvcount, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int MPI_Register_datarep(char *datarep, MPI_Datarep_conversion_function *read_conversion_fn, MPI_Datarep_conversion_function *write_conversion_fn, MPI_Datarep_extent_function *dtype_file_extent_fn, void *extra_state); int MPI_Request_c2f(MPI_Request request); MPI_Request MPI_Request_f2c(int request); int MPI_Request_free(MPI_Request *request); int MPI_Request_get_status(MPI_Request request, int *flag, MPI_Status *status); int MPI_Rsend(void *ibuf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int MPI_Rsend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Scan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int MPI_Iscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int MPI_Scatter(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int MPI_Iscatter(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int MPI_Scatterv(void *sendbuf, int *sendcounts, int *displs, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int MPI_Iscatterv(void *sendbuf, int *sendcounts, int *displs, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int MPI_Send_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Send(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int MPI_Sendrecv(void *sendbuf, int sendcount, MPI_Datatype sendtype, int dest, int sendtag, void *recvbuf, int recvcount, MPI_Datatype recvtype, int source, int recvtag, MPI_Comm comm, MPI_Status *status); int MPI_Sendrecv_replace(void * buf, int count, MPI_Datatype datatype, int dest, int sendtag, int source, int recvtag, MPI_Comm comm, MPI_Status *status); int MPI_Ssend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Ssend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int MPI_Start(MPI_Request *request); int MPI_Startall(int count, MPI_Request *array_of_requests); int MPI_Status_c2f(MPI_Status *c_status, int *f_status); int MPI_Status_f2c(int *f_status, MPI_Status *c_status); int MPI_Status_set_cancelled(MPI_Status *status, int flag); int MPI_Status_set_elements(MPI_Status *status, MPI_Datatype datatype, int count); int MPI_Testall(int count, MPI_Request array_of_requests[], int *flag, MPI_Status array_of_statuses[]); int MPI_Testany(int count, MPI_Request array_of_requests[], int *index, int *flag, MPI_Status *status); int MPI_Test(MPI_Request *request, int *flag, MPI_Status *status); int MPI_Test_cancelled(MPI_Status *status, int *flag); int MPI_Testsome(int incount, MPI_Request array_of_requests[], int *outcount, int array_of_indices[], MPI_Status array_of_statuses[]); int MPI_Topo_test(MPI_Comm comm, int *status); int MPI_Type_c2f(MPI_Datatype datatype); int MPI_Type_commit(MPI_Datatype *type); int MPI_Type_contiguous(int count, MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_darray(int size, int rank, int ndims, int gsize_array[], int distrib_array[], int darg_array[], int psize_array[], int order, MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_f90_complex(int p, int r, MPI_Datatype *newtype); int MPI_Type_create_f90_integer(int r, MPI_Datatype *newtype); int MPI_Type_create_f90_real(int p, int r, MPI_Datatype *newtype); int MPI_Type_create_hindexed(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_hvector(int count, int blocklength, MPI_Aint stride, MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_keyval(MPI_Type_copy_attr_function *type_copy_attr_fn, MPI_Type_delete_attr_function *type_delete_attr_fn, int *type_keyval, void *extra_state); int MPI_Type_create_indexed_block(int count, int blocklength, int array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_struct(int count, int array_of_block_lengths[], MPI_Aint array_of_displacements[], MPI_Datatype array_of_types[], MPI_Datatype *newtype); int MPI_Type_create_subarray(int ndims, int size_array[], int subsize_array[], int start_array[], int order, MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_resized(MPI_Datatype oldtype, MPI_Aint lb, MPI_Aint extent, MPI_Datatype *newtype); int MPI_Type_delete_attr(MPI_Datatype type, int type_keyval); int MPI_Type_dup(MPI_Datatype type, MPI_Datatype *newtype); int MPI_Type_extent(MPI_Datatype type, MPI_Aint *extent) ; int MPI_Type_free(MPI_Datatype *type); int MPI_Type_free_keyval(int *type_keyval); MPI_Datatype MPI_Type_f2c(int datatype); int MPI_Type_get_attr(MPI_Datatype type, int type_keyval, void *attribute_val, int *flag); int MPI_Type_get_contents(MPI_Datatype mtype, int max_integers, int max_addresses, int max_datatypes, int array_of_integers[], MPI_Aint array_of_addresses[], MPI_Datatype array_of_datatypes[]); int MPI_Type_get_envelope(MPI_Datatype type, int *num_integers, int *num_addresses, int *num_datatypes, int *combiner); int MPI_Type_get_extent(MPI_Datatype type, MPI_Aint *lb, MPI_Aint *extent); int MPI_Type_get_name(MPI_Datatype type, char *type_name, int *resultlen); int MPI_Type_get_true_extent(MPI_Datatype datatype, MPI_Aint *true_lb, MPI_Aint *true_extent); int MPI_Type_hindexed(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype) ; int MPI_Type_hvector(int count, int blocklength, MPI_Aint stride, MPI_Datatype oldtype, MPI_Datatype *newtype) ; int MPI_Type_indexed(int count, int array_of_blocklengths[], int array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_lb(MPI_Datatype type, MPI_Aint *lb) ; int MPI_Type_match_size(int typeclass, int size, MPI_Datatype *type); int MPI_Type_set_attr(MPI_Datatype type, int type_keyval, void *attr_val); int MPI_Type_set_name(MPI_Datatype type, char *type_name); int MPI_Type_size(MPI_Datatype type, int *size); int MPI_Type_struct(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype array_of_types[], MPI_Datatype *newtype) ; int MPI_Type_ub(MPI_Datatype mtype, MPI_Aint *ub) ; int MPI_Type_vector(int count, int blocklength, int stride, MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Unpack(void *inbuf, int insize, int *position, void *outbuf, int outcount, MPI_Datatype datatype, MPI_Comm comm); int MPI_Unpublish_name(char *service_name, MPI_Info info, char *port_name); int MPI_Unpack_external (char *datarep, void *inbuf, MPI_Aint insize, MPI_Aint *position, void *outbuf, int outcount, MPI_Datatype datatype); int MPI_Waitall(int count, MPI_Request *array_of_requests, MPI_Status *array_of_statuses); int MPI_Waitany(int count, MPI_Request *array_of_requests, int *index, MPI_Status *status); int MPI_Wait(MPI_Request *request, MPI_Status *status); int MPI_Waitsome(int incount, MPI_Request *array_of_requests, int *outcount, int *array_of_indices, MPI_Status *array_of_statuses); int MPI_Win_c2f(MPI_Win win); int MPI_Win_call_errhandler(MPI_Win win, int errorcode); int MPI_Win_complete(MPI_Win win); int MPI_Win_create(void *base, MPI_Aint size, int disp_unit, MPI_Info info, MPI_Comm comm, MPI_Win *win); int MPI_Win_create_errhandler(MPI_Win_errhandler_function *function, MPI_Errhandler *errhandler); int MPI_Win_create_keyval(MPI_Win_copy_attr_function *win_copy_attr_fn, MPI_Win_delete_attr_function *win_delete_attr_fn, int *win_keyval, void *extra_state); int MPI_Win_delete_attr(MPI_Win win, int win_keyval); MPI_Win MPI_Win_f2c(int win); int MPI_Win_fence(int assert, MPI_Win win); int MPI_Win_free(MPI_Win *win); int MPI_Win_free_keyval(int *win_keyval); int MPI_Win_get_attr(MPI_Win win, int win_keyval, void *attribute_val, int *flag); int MPI_Win_get_errhandler(MPI_Win win, MPI_Errhandler *errhandler); int MPI_Win_get_group(MPI_Win win, MPI_Group *group); int MPI_Win_get_name(MPI_Win win, char *win_name, int *resultlen); int MPI_Win_lock(int lock_type, int rank, int assert, MPI_Win win); int MPI_Win_post(MPI_Group group, int assert, MPI_Win win); int MPI_Win_set_attr(MPI_Win win, int win_keyval, void *attribute_val); int MPI_Win_set_errhandler(MPI_Win win, MPI_Errhandler errhandler); int MPI_Win_set_name(MPI_Win win, char *win_name); int MPI_Win_start(MPI_Group group, int assert, MPI_Win win); int MPI_Win_test(MPI_Win win, int *flag); int MPI_Win_unlock(int rank, MPI_Win win); int MPI_Win_wait(MPI_Win win); double MPI_Wtick(void); double MPI_Wtime(void); int PMPI_Abort(MPI_Comm comm, int errorcode); int PMPI_Accumulate(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Op op, MPI_Win win); int PMPI_Add_error_class(int *errorclass); int PMPI_Add_error_code(int errorclass, int *errorcode); int PMPI_Add_error_string(int errorcode, char *string); int PMPI_Address(void *location, MPI_Aint *address) ; int PMPI_Allgather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm); int PMPI_Iallgather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int PMPI_Allgatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, MPI_Comm comm); int PMPI_Iallgatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int PMPI_Alloc_mem(MPI_Aint size, MPI_Info info, void *baseptr); int PMPI_Allreduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int PMPI_Iallreduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int PMPI_Alltoall(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm); int PMPI_Ialltoall(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int PMPI_Alltoallv(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype recvtype, MPI_Comm comm); int PMPI_Ialltoallv(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int PMPI_Alltoallw(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype *sendtypes, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype *recvtypes, MPI_Comm comm); int PMPI_Ialltoallw(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype *sendtypes, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype *recvtypes, MPI_Comm comm, MPI_Request *request); int PMPI_Attr_delete(MPI_Comm comm, int keyval) ; int PMPI_Attr_get(MPI_Comm comm, int keyval, void *attribute_val, int *flag) ; int PMPI_Dist_graph_create(MPI_Comm comm_old, int n, int nodes[], int degrees[], int targets[], int weights[], MPI_Info info, int reorder, MPI_Comm * newcomm); int PMPI_Dist_graph_create_adjacent(MPI_Comm comm_old, int indegree, int sources[], int sourceweights[], int outdegree, int destinations[], int destweights[], MPI_Info info, int reorder, MPI_Comm *comm_dist_graph); int PMPI_Dist_graph_neighbors(MPI_Comm comm, int maxindegree, int sources[], int sourceweights[], int maxoutdegree, int destinations[], int destweights[]); int PMPI_Dist_graph_neighbors_count(MPI_Comm comm, int *inneighbors, int *outneighbors, int *weighted); int PMPI_Attr_put(MPI_Comm comm, int keyval, void *attribute_val) ; int PMPI_Barrier(MPI_Comm comm); int PMPI_Ibarrier(MPI_Comm comm, MPI_Request *request); int PMPI_Bcast(void *buffer, int count, MPI_Datatype datatype, int root, MPI_Comm comm); int PMPI_Ibcast(void *buffer, int count, MPI_Datatype datatype, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Bsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int PMPI_Bsend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Buffer_attach(void *buffer, int size); int PMPI_Buffer_detach(void *buffer, int *size); int PMPI_Cancel(MPI_Request *request); int PMPI_Cart_coords(MPI_Comm comm, int rank, int maxdims, int *coords); int PMPI_Cart_create(MPI_Comm old_comm, int ndims, int *dims, int *periods, int reorder, MPI_Comm *comm_cart); int PMPI_Cart_get(MPI_Comm comm, int maxdims, int *dims, int *periods, int *coords); int PMPI_Cart_map(MPI_Comm comm, int ndims, int *dims, int *periods, int *newrank); int PMPI_Cart_rank(MPI_Comm comm, int *coords, int *rank); int PMPI_Cart_shift(MPI_Comm comm, int direction, int disp, int *rank_source, int *rank_dest); int PMPI_Cart_sub(MPI_Comm comm, int *remain_dims, MPI_Comm *new_comm); int PMPI_Cartdim_get(MPI_Comm comm, int *ndims); int PMPI_Close_port(char *port_name); int PMPI_Comm_accept(char *port_name, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *newcomm); int PMPI_Comm_c2f(MPI_Comm comm); int PMPI_Comm_call_errhandler(MPI_Comm comm, int errorcode); int PMPI_Comm_compare(MPI_Comm comm1, MPI_Comm comm2, int *result); int PMPI_Comm_connect(char *port_name, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *newcomm); int PMPI_Comm_create_errhandler(MPI_Comm_errhandler_function *function, MPI_Errhandler *errhandler); int PMPI_Comm_create_keyval(MPI_Comm_copy_attr_function *comm_copy_attr_fn, MPI_Comm_delete_attr_function *comm_delete_attr_fn, int *comm_keyval, void *extra_state); int PMPI_Comm_create(MPI_Comm comm, MPI_Group group, MPI_Comm *newcomm); int PMPI_Comm_delete_attr(MPI_Comm comm, int comm_keyval); int PMPI_Comm_disconnect(MPI_Comm *comm); int PMPI_Comm_dup(MPI_Comm comm, MPI_Comm *newcomm); MPI_Comm PMPI_Comm_f2c(int comm); int PMPI_Comm_free_keyval(int *comm_keyval); int PMPI_Comm_free(MPI_Comm *comm); int PMPI_Comm_get_attr(MPI_Comm comm, int comm_keyval, void *attribute_val, int *flag); int PMPI_Comm_get_errhandler(MPI_Comm comm, MPI_Errhandler *erhandler); int PMPI_Comm_get_name(MPI_Comm comm, char *comm_name, int *resultlen); int PMPI_Comm_get_parent(MPI_Comm *parent); int PMPI_Comm_group(MPI_Comm comm, MPI_Group *group); int PMPI_Comm_join(int fd, MPI_Comm *intercomm); int PMPI_Comm_rank(MPI_Comm comm, int *rank); int PMPI_Comm_remote_group(MPI_Comm comm, MPI_Group *group); int PMPI_Comm_remote_size(MPI_Comm comm, int *size); int PMPI_Comm_set_attr(MPI_Comm comm, int comm_keyval, void *attribute_val); int PMPI_Comm_set_errhandler(MPI_Comm comm, MPI_Errhandler errhandler); int PMPI_Comm_set_name(MPI_Comm comm, char *comm_name); int PMPI_Comm_size(MPI_Comm comm, int *size); int PMPI_Comm_spawn(char *command, char **argv, int maxprocs, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *intercomm, int *array_of_errcodes); int PMPI_Comm_spawn_multiple(int count, char **array_of_commands, char ***array_of_argv, int *array_of_maxprocs, MPI_Info *array_of_info, int root, MPI_Comm comm, MPI_Comm *intercomm, int *array_of_errcodes); int PMPI_Comm_split(MPI_Comm comm, int color, int key, MPI_Comm *newcomm); int PMPI_Comm_test_inter(MPI_Comm comm, int *flag); int PMPI_Dims_create(int nnodes, int ndims, int *dims); int PMPI_Errhandler_c2f(MPI_Errhandler errhandler); int PMPI_Errhandler_create(MPI_Handler_function *function, MPI_Errhandler *errhandler) ; MPI_Errhandler PMPI_Errhandler_f2c(int errhandler); int PMPI_Errhandler_free(MPI_Errhandler *errhandler); int PMPI_Errhandler_get(MPI_Comm comm, MPI_Errhandler *errhandler) ; int PMPI_Errhandler_set(MPI_Comm comm, MPI_Errhandler errhandler) ; int PMPI_Error_class(int errorcode, int *errorclass); int PMPI_Error_string(int errorcode, char *string, int *resultlen); int PMPI_Exscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int PMPI_Iexscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int PMPI_File_c2f(MPI_File file); MPI_File PMPI_File_f2c(int file); int PMPI_File_call_errhandler(MPI_File fh, int errorcode); int PMPI_File_create_errhandler(MPI_File_errhandler_function *function, MPI_Errhandler *errhandler); int PMPI_File_set_errhandler( MPI_File file, MPI_Errhandler errhandler); int PMPI_File_get_errhandler( MPI_File file, MPI_Errhandler *errhandler); int PMPI_File_open(MPI_Comm comm, char *filename, int amode, MPI_Info info, MPI_File *fh); int PMPI_File_close(MPI_File *fh); int PMPI_File_delete(char *filename, MPI_Info info); int PMPI_File_set_size(MPI_File fh, MPI_Offset size); int PMPI_File_preallocate(MPI_File fh, MPI_Offset size); int PMPI_File_get_size(MPI_File fh, MPI_Offset *size); int PMPI_File_get_group(MPI_File fh, MPI_Group *group); int PMPI_File_get_amode(MPI_File fh, int *amode); int PMPI_File_set_info(MPI_File fh, MPI_Info info); int PMPI_File_get_info(MPI_File fh, MPI_Info *info_used); int PMPI_File_set_view(MPI_File fh, MPI_Offset disp, MPI_Datatype etype, MPI_Datatype filetype, char *datarep, MPI_Info info); int PMPI_File_get_view(MPI_File fh, MPI_Offset *disp, MPI_Datatype *etype, MPI_Datatype *filetype, char *datarep); int PMPI_File_read_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_read_at_all(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write_at_all(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_iread_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_iwrite_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_read(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_read_all(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write_all(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_iread(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_iwrite(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_seek(MPI_File fh, MPI_Offset offset, int whence); int PMPI_File_get_position(MPI_File fh, MPI_Offset *offset); int PMPI_File_get_byte_offset(MPI_File fh, MPI_Offset offset, MPI_Offset *disp); int PMPI_File_read_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_iread_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_iwrite_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_read_ordered(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write_ordered(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_seek_shared(MPI_File fh, MPI_Offset offset, int whence); int PMPI_File_get_position_shared(MPI_File fh, MPI_Offset *offset); int PMPI_File_read_at_all_begin(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype); int PMPI_File_read_at_all_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_write_at_all_begin(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype); int PMPI_File_write_at_all_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_read_all_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int PMPI_File_read_all_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_write_all_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int PMPI_File_write_all_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_read_ordered_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int PMPI_File_read_ordered_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_write_ordered_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int PMPI_File_write_ordered_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_get_type_extent(MPI_File fh, MPI_Datatype datatype, MPI_Aint *extent); int PMPI_File_set_atomicity(MPI_File fh, int flag); int PMPI_File_get_atomicity(MPI_File fh, int *flag); int PMPI_File_sync(MPI_File fh); int PMPI_Finalize(void); int PMPI_Finalized(int *flag); int PMPI_Free_mem(void *base); int PMPI_Gather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int PMPI_Igather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Gatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, int root, MPI_Comm comm); int PMPI_Igatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Get_address(void *location, MPI_Aint *address); int PMPI_Get_count(MPI_Status *status, MPI_Datatype datatype, int *count); int PMPI_Get_elements(MPI_Status *status, MPI_Datatype datatype, int *count); int PMPI_Get(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Win win); int PMPI_Get_processor_name(char *name, int *resultlen); int PMPI_Get_version(int *version, int *subversion); int PMPI_Graph_create(MPI_Comm comm_old, int nnodes, int *index, int *edges, int reorder, MPI_Comm *comm_graph); int PMPI_Graph_get(MPI_Comm comm, int maxindex, int maxedges, int *index, int *edges); int PMPI_Graph_map(MPI_Comm comm, int nnodes, int *index, int *edges, int *newrank); int PMPI_Graph_neighbors_count(MPI_Comm comm, int rank, int *nneighbors); int PMPI_Graph_neighbors(MPI_Comm comm, int rank, int maxneighbors, int *neighbors); int PMPI_Graphdims_get(MPI_Comm comm, int *nnodes, int *nedges); int PMPI_Grequest_complete(MPI_Request request); int PMPI_Grequest_start(MPI_Grequest_query_function *query_fn, MPI_Grequest_free_function *free_fn, MPI_Grequest_cancel_function *cancel_fn, void *extra_state, MPI_Request *request); int PMPI_Group_c2f(MPI_Group group); int PMPI_Group_compare(MPI_Group group1, MPI_Group group2, int *result); int PMPI_Group_difference(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int PMPI_Group_excl(MPI_Group group, int n, int *ranks, MPI_Group *newgroup); MPI_Group PMPI_Group_f2c(int group); int PMPI_Group_free(MPI_Group *group); int PMPI_Group_incl(MPI_Group group, int n, int *ranks, MPI_Group *newgroup); int PMPI_Group_intersection(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int PMPI_Group_range_excl(MPI_Group group, int n, int ranges[][3], MPI_Group *newgroup); int PMPI_Group_range_incl(MPI_Group group, int n, int ranges[][3], MPI_Group *newgroup); int PMPI_Group_rank(MPI_Group group, int *rank); int PMPI_Group_size(MPI_Group group, int *size); int PMPI_Group_translate_ranks(MPI_Group group1, int n, int *ranks1, MPI_Group group2, int *ranks2); int PMPI_Group_union(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int PMPI_Ibsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Improbe(int source, int tag, MPI_Comm comm, int *flag, MPI_Message *message, MPI_Status *status); int PMPI_Imrecv(void *buf, int count, MPI_Datatype type, MPI_Message *message, MPI_Request *request); int PMPI_Info_c2f(MPI_Info info); int PMPI_Info_create(MPI_Info *info); int PMPI_Info_delete(MPI_Info info, char *key); int PMPI_Info_dup(MPI_Info info, MPI_Info *newinfo); MPI_Info PMPI_Info_f2c(int info); int PMPI_Info_free(MPI_Info *info); int PMPI_Info_get(MPI_Info info, char *key, int valuelen, char *value, int *flag); int PMPI_Info_get_nkeys(MPI_Info info, int *nkeys); int PMPI_Info_get_nthkey(MPI_Info info, int n, char *key); int PMPI_Info_get_valuelen(MPI_Info info, char *key, int *valuelen, int *flag); int PMPI_Info_set(MPI_Info info, char *key, char *value); int PMPI_Init(int *argc, char ***argv); int PMPI_Initialized(int *flag); int PMPI_Init_thread(int *argc, char ***argv, int required, int *provided); int PMPI_Intercomm_create(MPI_Comm local_comm, int local_leader, MPI_Comm bridge_comm, int remote_leader, int tag, MPI_Comm *newintercomm); int PMPI_Intercomm_merge(MPI_Comm intercomm, int high, MPI_Comm *newintercomm); int PMPI_Iprobe(int source, int tag, MPI_Comm comm, int *flag, MPI_Status *status); int PMPI_Irecv(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Irsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Isend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Issend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Is_thread_main(int *flag); int PMPI_Keyval_create(MPI_Copy_function *copy_fn, MPI_Delete_function *delete_fn, int *keyval, void *extra_state) ; int PMPI_Keyval_free(int *keyval) ; int PMPI_Lookup_name(char *service_name, MPI_Info info, char *port_name); int PMPI_Message_c2f(MPI_Message message); MPI_Message PMPI_Message_f2c(int message); int PMPI_Mprobe(int source, int tag, MPI_Comm comm, MPI_Message *message, MPI_Status *status); int PMPI_Mrecv(void *buf, int count, MPI_Datatype type, MPI_Message *message, MPI_Status *status); int PMPI_Op_c2f(MPI_Op op); int PMPI_Op_commutative(MPI_Op op, int *commute); int PMPI_Op_create(MPI_User_function *function, int commute, MPI_Op *op); int PMPI_Open_port(MPI_Info info, char *port_name); MPI_Op PMPI_Op_f2c(int op); int PMPI_Op_free(MPI_Op *op); int PMPI_Pack_external(char *datarep, void *inbuf, int incount, MPI_Datatype datatype, void *outbuf, MPI_Aint outsize, MPI_Aint *position); int PMPI_Pack_external_size(char *datarep, int incount, MPI_Datatype datatype, MPI_Aint *size); int PMPI_Pack(void *inbuf, int incount, MPI_Datatype datatype, void *outbuf, int outsize, int *position, MPI_Comm comm); int PMPI_Pack_size(int incount, MPI_Datatype datatype, MPI_Comm comm, int *size); int PMPI_Pcontrol(const int level, ...); int PMPI_Probe(int source, int tag, MPI_Comm comm, MPI_Status *status); int PMPI_Publish_name(char *service_name, MPI_Info info, char *port_name); int PMPI_Put(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Win win); int PMPI_Query_thread(int *provided); int PMPI_Recv_init(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Recv(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Status *status); int PMPI_Reduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, int root, MPI_Comm comm); int PMPI_Ireduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Reduce_local(void *inbuf, void *inoutbuf, int count, MPI_Datatype datatype, MPI_Op); int PMPI_Reduce_scatter(void *sendbuf, void *recvbuf, int *recvcounts, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int PMPI_Ireduce_scatter(void *sendbuf, void *recvbuf, int *recvcounts, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int PMPI_Reduce_scatter_block(void *sendbuf, void *recvbuf, int recvcount, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int PMPI_Ireduce_scatter_block(void *sendbuf, void *recvbuf, int recvcount, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int PMPI_Register_datarep(char *datarep, MPI_Datarep_conversion_function *read_conversion_fn, MPI_Datarep_conversion_function *write_conversion_fn, MPI_Datarep_extent_function *dtype_file_extent_fn, void *extra_state); int PMPI_Request_c2f(MPI_Request request); MPI_Request PMPI_Request_f2c(int request); int PMPI_Request_free(MPI_Request *request); int PMPI_Request_get_status(MPI_Request request, int *flag, MPI_Status *status); int PMPI_Rsend(void *ibuf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int PMPI_Rsend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Scan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int PMPI_Iscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int PMPI_Scatter(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int PMPI_Iscatter(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Scatterv(void *sendbuf, int *sendcounts, int *displs, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int PMPI_Iscatterv(void *sendbuf, int *sendcounts, int *displs, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Send_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Send(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int PMPI_Sendrecv(void *sendbuf, int sendcount, MPI_Datatype sendtype, int dest, int sendtag, void *recvbuf, int recvcount, MPI_Datatype recvtype, int source, int recvtag, MPI_Comm comm, MPI_Status *status); int PMPI_Sendrecv_replace(void * buf, int count, MPI_Datatype datatype, int dest, int sendtag, int source, int recvtag, MPI_Comm comm, MPI_Status *status); int PMPI_Ssend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Ssend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int PMPI_Start(MPI_Request *request); int PMPI_Startall(int count, MPI_Request *array_of_requests); int PMPI_Status_c2f(MPI_Status *c_status, int *f_status); int PMPI_Status_f2c(int *f_status, MPI_Status *c_status); int PMPI_Status_set_cancelled(MPI_Status *status, int flag); int PMPI_Status_set_elements(MPI_Status *status, MPI_Datatype datatype, int count); int PMPI_Testall(int count, MPI_Request array_of_requests[], int *flag, MPI_Status array_of_statuses[]); int PMPI_Testany(int count, MPI_Request array_of_requests[], int *index, int *flag, MPI_Status *status); int PMPI_Test(MPI_Request *request, int *flag, MPI_Status *status); int PMPI_Test_cancelled(MPI_Status *status, int *flag); int PMPI_Testsome(int incount, MPI_Request array_of_requests[], int *outcount, int array_of_indices[], MPI_Status array_of_statuses[]); int PMPI_Topo_test(MPI_Comm comm, int *status); int PMPI_Type_c2f(MPI_Datatype datatype); int PMPI_Type_commit(MPI_Datatype *type); int PMPI_Type_contiguous(int count, MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_darray(int size, int rank, int ndims, int gsize_array[], int distrib_array[], int darg_array[], int psize_array[], int order, MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_f90_complex(int p, int r, MPI_Datatype *newtype); int PMPI_Type_create_f90_integer(int r, MPI_Datatype *newtype); int PMPI_Type_create_f90_real(int p, int r, MPI_Datatype *newtype); int PMPI_Type_create_hindexed(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_hvector(int count, int blocklength, MPI_Aint stride, MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_keyval(MPI_Type_copy_attr_function *type_copy_attr_fn, MPI_Type_delete_attr_function *type_delete_attr_fn, int *type_keyval, void *extra_state); int PMPI_Type_create_indexed_block(int count, int blocklength, int array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_struct(int count, int array_of_block_lengths[], MPI_Aint array_of_displacements[], MPI_Datatype array_of_types[], MPI_Datatype *newtype); int PMPI_Type_create_subarray(int ndims, int size_array[], int subsize_array[], int start_array[], int order, MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_resized(MPI_Datatype oldtype, MPI_Aint lb, MPI_Aint extent, MPI_Datatype *newtype); int PMPI_Type_delete_attr(MPI_Datatype type, int type_keyval); int PMPI_Type_dup(MPI_Datatype type, MPI_Datatype *newtype); int PMPI_Type_extent(MPI_Datatype type, MPI_Aint *extent) ; int PMPI_Type_free(MPI_Datatype *type); int PMPI_Type_free_keyval(int *type_keyval); MPI_Datatype PMPI_Type_f2c(int datatype); int PMPI_Type_get_attr(MPI_Datatype type, int type_keyval, void *attribute_val, int *flag); int PMPI_Type_get_contents(MPI_Datatype mtype, int max_integers, int max_addresses, int max_datatypes, int array_of_integers[], MPI_Aint array_of_addresses[], MPI_Datatype array_of_datatypes[]); int PMPI_Type_get_envelope(MPI_Datatype type, int *num_integers, int *num_addresses, int *num_datatypes, int *combiner); int PMPI_Type_get_extent(MPI_Datatype type, MPI_Aint *lb, MPI_Aint *extent); int PMPI_Type_get_name(MPI_Datatype type, char *type_name, int *resultlen); int PMPI_Type_get_true_extent(MPI_Datatype datatype, MPI_Aint *true_lb, MPI_Aint *true_extent); int PMPI_Type_hindexed(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype) ; int PMPI_Type_hvector(int count, int blocklength, MPI_Aint stride, MPI_Datatype oldtype, MPI_Datatype *newtype) ; int PMPI_Type_indexed(int count, int array_of_blocklengths[], int array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_lb(MPI_Datatype type, MPI_Aint *lb) ; int PMPI_Type_match_size(int typeclass, int size, MPI_Datatype *type); int PMPI_Type_set_attr(MPI_Datatype type, int type_keyval, void *attr_val); int PMPI_Type_set_name(MPI_Datatype type, char *type_name); int PMPI_Type_size(MPI_Datatype type, int *size); int PMPI_Type_struct(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype array_of_types[], MPI_Datatype *newtype) ; int PMPI_Type_ub(MPI_Datatype mtype, MPI_Aint *ub) ; int PMPI_Type_vector(int count, int blocklength, int stride, MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Unpack(void *inbuf, int insize, int *position, void *outbuf, int outcount, MPI_Datatype datatype, MPI_Comm comm); int PMPI_Unpublish_name(char *service_name, MPI_Info info, char *port_name); int PMPI_Unpack_external (char *datarep, void *inbuf, MPI_Aint insize, MPI_Aint *position, void *outbuf, int outcount, MPI_Datatype datatype); int PMPI_Waitall(int count, MPI_Request *array_of_requests, MPI_Status *array_of_statuses); int PMPI_Waitany(int count, MPI_Request *array_of_requests, int *index, MPI_Status *status); int PMPI_Wait(MPI_Request *request, MPI_Status *status); int PMPI_Waitsome(int incount, MPI_Request *array_of_requests, int *outcount, int *array_of_indices, MPI_Status *array_of_statuses); int PMPI_Win_c2f(MPI_Win win); int PMPI_Win_call_errhandler(MPI_Win win, int errorcode); int PMPI_Win_complete(MPI_Win win); int PMPI_Win_create(void *base, MPI_Aint size, int disp_unit, MPI_Info info, MPI_Comm comm, MPI_Win *win); int PMPI_Win_create_errhandler(MPI_Win_errhandler_function *function, MPI_Errhandler *errhandler); int PMPI_Win_create_keyval(MPI_Win_copy_attr_function *win_copy_attr_fn, MPI_Win_delete_attr_function *win_delete_attr_fn, int *win_keyval, void *extra_state); int PMPI_Win_delete_attr(MPI_Win win, int win_keyval); MPI_Win PMPI_Win_f2c(int win); int PMPI_Win_fence(int assert, MPI_Win win); int PMPI_Win_free(MPI_Win *win); int PMPI_Win_free_keyval(int *win_keyval); int PMPI_Win_get_attr(MPI_Win win, int win_keyval, void *attribute_val, int *flag); int PMPI_Win_get_errhandler(MPI_Win win, MPI_Errhandler *errhandler); int PMPI_Win_get_group(MPI_Win win, MPI_Group *group); int PMPI_Win_get_name(MPI_Win win, char *win_name, int *resultlen); int PMPI_Win_lock(int lock_type, int rank, int assert, MPI_Win win); int PMPI_Win_post(MPI_Group group, int assert, MPI_Win win); int PMPI_Win_set_attr(MPI_Win win, int win_keyval, void *attribute_val); int PMPI_Win_set_errhandler(MPI_Win win, MPI_Errhandler errhandler); int PMPI_Win_set_name(MPI_Win win, char *win_name); int PMPI_Win_start(MPI_Group group, int assert, MPI_Win win); int PMPI_Win_test(MPI_Win win, int *flag); int PMPI_Win_unlock(int rank, MPI_Win win); int PMPI_Win_wait(MPI_Win win); double PMPI_Wtick(void); double PMPI_Wtime(void); #line 2281 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Found header files ['mpi.h'] in [] Popping language C ================================================================================ TEST configureConversion from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:212) TESTING: configureConversion from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:212) Check for the functions which convert communicators between C and Fortran - Define HAVE_MPI_COMM_F2C and HAVE_MPI_COMM_C2F if they are present - Some older MPI 1 implementations are missing these All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { if (MPI_Comm_f2c((MPI_Fint)0)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_MPI_COMM_F2C" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { if (MPI_Comm_c2f(MPI_COMM_WORLD)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_MPI_COMM_C2F" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c", line 6: warning: variable "a" was declared but never referenced MPI_Fint a; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_Fint a; ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_MPI_FINT" to "1" ================================================================================ TEST configureMPI2 from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:180) TESTING: configureMPI2 from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:180) Check for functions added to the interface in MPI-2 Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int flag;if (MPI_Finalized(&flag)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_MPI_FINALIZED" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { if (MPI_Allreduce(MPI_IN_PLACE,0, 1, MPI_INT, MPI_SUM, MPI_COMM_SELF)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_MPI_IN_PLACE" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c", line 6: warning: a value of type "int" cannot be used to initialize an entity of type "MPI_Datatype" int count=2; int blocklens[2]={0,1}; MPI_Aint indices[2]={0,1}; MPI_Datatype old_types[2]={0,1}; MPI_Datatype *newtype = 0; ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c", line 6: warning: conversion of nonzero integer to pointer int count=2; int blocklens[2]={0,1}; MPI_Aint indices[2]={0,1}; MPI_Datatype old_types[2]={0,1}; MPI_Datatype *newtype = 0; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { int count=2; int blocklens[2]={0,1}; MPI_Aint indices[2]={0,1}; MPI_Datatype old_types[2]={0,1}; MPI_Datatype *newtype = 0; if (MPI_Type_create_struct(count, blocklens, indices, old_types, newtype)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_Comm_errhandler_fn * p_err_fun = 0; MPI_Errhandler * p_errhandler = 0; if (MPI_Comm_create_errhandler(p_err_fun,p_errhandler)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { if (MPI_Comm_set_errhandler(MPI_COMM_WORLD,MPI_ERRORS_RETURN)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl ================================================================================ TEST configureTypes from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:232) TESTING: configureTypes from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:232) Checking for MPI types Checking for size of type: MPI_Comm Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif #define MPICH_IGNORE_CXX_SEEK #define MPICH_SKIP_MPICXX 1 #define OMPI_SKIP_MPICXX 1 #include int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(MPI_Comm)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Popping language C Defined "SIZEOF_MPI_COMM" to "8" Checking for size of type: MPI_Fint Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif #define MPICH_IGNORE_CXX_SEEK #define MPICH_SKIP_MPICXX 1 #define OMPI_SKIP_MPICXX 1 #include int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(MPI_Fint)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Popping language C Defined "SIZEOF_MPI_FINT" to "4" ================================================================================ TEST configureMPITypes from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:244) TESTING: configureMPITypes from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:244) Checking for MPI Datatype handles Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif #include int main() { MPI_Aint size; int ierr; MPI_Init(0,0); ierr = MPI_Type_extent(MPI_LONG_DOUBLE, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif #include int main() { MPI_Aint size; int ierr; MPI_Init(0,0); ierr = MPI_Type_extent(MPI_LONG_DOUBLE, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest ERROR while running executable: Could not execute "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest": [o05-037:09371] [mpi::ess-ple::jrm-init-failure] [[INVALID],INVALID] Error caused by PLE. [errno:26674688] [o05-037:09371] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_errmgr_base_error_abort+0x84) [0xffffffff10e58404] [o05-037:09371] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0 [0xffffffff10e5b220] [o05-037:09371] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_init+0x120) [0xffffffff10e1aa60] [o05-037:09371] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(ompi_mpi_init+0x228) [0xffffffff10bfbe28] [o05-037:09371] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(MPI_Init+0x144) [0xffffffff10c2c804] [o05-037:09371] /opt/FJSVtclang/GM-1.2.0-20/lib64/libtrtmet_c.so.1(MPI_Init+0x2c) [0xffffffff0015d668] [o05-037:09371] /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest(main+0x14) [0x100d14] [o05-037:09371] /lib64/libc.so.6(__libc_start_main+0x194) [0xffffffff1261b81c] [o05-037:09371] /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest [0x100bac] [o05-037:09371] [mpi::ess-ple::init-failure] [[INVALID],INVALID] PLE is not yet initialized. Popping language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif #include int main() { MPI_Aint size; int ierr; MPI_Init(0,0); ierr = MPI_Type_extent(MPI_INT64_T, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif #include int main() { MPI_Aint size; int ierr; MPI_Init(0,0); ierr = MPI_Type_extent(MPI_INT64_T, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest ERROR while running executable: Could not execute "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest": [o05-037:09400] [mpi::ess-ple::jrm-init-failure] [[INVALID],INVALID] Error caused by PLE. [errno:26674688] [o05-037:09400] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_errmgr_base_error_abort+0x84) [0xffffffff10e58404] [o05-037:09400] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0 [0xffffffff10e5b220] [o05-037:09400] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_init+0x120) [0xffffffff10e1aa60] [o05-037:09400] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(ompi_mpi_init+0x228) [0xffffffff10bfbe28] [o05-037:09400] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(MPI_Init+0x144) [0xffffffff10c2c804] [o05-037:09400] /opt/FJSVtclang/GM-1.2.0-20/lib64/libtrtmet_c.so.1(MPI_Init+0x2c) [0xffffffff0015d668] [o05-037:09400] /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest(main+0x14) [0x100d14] [o05-037:09400] /lib64/libc.so.6(__libc_start_main+0x194) [0xffffffff1261b81c] [o05-037:09400] /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest [0x100bac] [o05-037:09400] [mpi::ess-ple::init-failure] [[INVALID],INVALID] PLE is not yet initialized. Popping language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif #include int main() { MPI_Aint size; int ierr; MPI_Init(0,0); ierr = MPI_Type_extent(MPI_C_DOUBLE_COMPLEX, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif #include int main() { MPI_Aint size; int ierr; MPI_Init(0,0); ierr = MPI_Type_extent(MPI_C_DOUBLE_COMPLEX, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest ERROR while running executable: Could not execute "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest": [o05-037:09429] [mpi::ess-ple::jrm-init-failure] [[INVALID],INVALID] Error caused by PLE. [errno:26674688] [o05-037:09429] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_errmgr_base_error_abort+0x84) [0xffffffff10e58404] [o05-037:09429] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0 [0xffffffff10e5b220] [o05-037:09429] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_init+0x120) [0xffffffff10e1aa60] [o05-037:09429] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(ompi_mpi_init+0x228) [0xffffffff10bfbe28] [o05-037:09429] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(MPI_Init+0x144) [0xffffffff10c2c804] [o05-037:09429] /opt/FJSVtclang/GM-1.2.0-20/lib64/libtrtmet_c.so.1(MPI_Init+0x2c) [0xffffffff0015d668] [o05-037:09429] /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest(main+0x14) [0x100d14] [o05-037:09429] /lib64/libc.so.6(__libc_start_main+0x194) [0xffffffff1261b81c] [o05-037:09429] /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest [0x100bac] [o05-037:09429] [mpi::ess-ple::init-failure] [[INVALID],INVALID] PLE is not yet initialized. Popping language C ================================================================================ TEST configureMissingPrototypes from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:318) TESTING: configureMissingPrototypes from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:318) Checks for missing prototypes, which it adds to petscfix.h ================================================================================ TEST SGIMPICheck from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:337) TESTING: SGIMPICheck from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:337) Returns true if SGI MPI is used Checking for functions [MPI_SGI_barrier] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_SGI_barrier(); static void _check_MPI_SGI_barrier() { MPI_SGI_barrier(); } int main() { _check_MPI_SGI_barrier();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o: In function `_check_MPI_SGI_barrier': conftest.c:(.text+0x4): undefined reference to `MPI_SGI_barrier' Popping language C SGI MPI test failure ================================================================================ TEST CxxMPICheck from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:347) TESTING: CxxMPICheck from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:347) Make sure C++ can compile and link Pushing language Cxx Checking for header mpi.h Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { ; return 0; } Checking for C++ MPI_Finalize() Checking for functions [MPI_Finalize] in library [] [] Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.cc Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.cc", line 5: warning: variable "ierr" was set but never used static void _check_MPI_Finalize() { int ierr; ^ Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_MPI_Finalize() { int ierr; ierr = MPI_Finalize();; } int main() { _check_MPI_Finalize();; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language Cxx Popping language Cxx ================================================================================ TEST FortranMPICheck from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:365) TESTING: FortranMPICheck from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:365) Make sure fortran include [mpif.h] and library symbols are found Pushing language FC Checking for header mpif.h Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.F Successful compile: Source: program main #include "mpif.h" end Checking for fortran mpi_init() Checking for functions [] in library [] [] Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.F Successful compile: Source: program main #include "mpif.h" integer ierr call mpi_init(ierr) end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language FC Checking for mpi.mod Checking for functions [] in library [] [] Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.F Successful compile: Source: program main use mpi integer ierr,rank call mpi_init(ierr) call mpi_comm_rank(MPI_COMM_WORLD,rank,ierr) end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language FC Defined "HAVE_MPI_F90MODULE" to "1" Popping language FC ================================================================================ TEST configureIO from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:390) TESTING: configureIO from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:390) Check for the functions in MPI/IO - Define HAVE_MPIIO if they are present - Some older MPI 1 implementations are missing these Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_Aint lb, extent; if (MPI_Type_get_extent(MPI_INT, &lb, &extent)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c", line 9: warning: variable "fh" is used before its value is set if (MPI_File_write_all(fh, buf, 1, MPI_INT, &status)); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c", line 9: warning: variable "buf" is used before its value is set if (MPI_File_write_all(fh, buf, 1, MPI_INT, &status)); ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_File fh; void *buf; MPI_Status status; if (MPI_File_write_all(fh, buf, 1, MPI_INT, &status)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c", line 9: warning: variable "fh" is used before its value is set if (MPI_File_read_all(fh, buf, 1, MPI_INT, &status)); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c", line 9: warning: variable "buf" is used before its value is set if (MPI_File_read_all(fh, buf, 1, MPI_INT, &status)); ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_File fh; void *buf; MPI_Status status; if (MPI_File_read_all(fh, buf, 1, MPI_INT, &status)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c", line 9: warning: variable "fh" is used before its value is set if (MPI_File_set_view(fh, disp, MPI_INT, MPI_INT, "", info)); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c", line 9: warning: variable "disp" is used before its value is set if (MPI_File_set_view(fh, disp, MPI_INT, MPI_INT, "", info)); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c", line 9: warning: variable "info" is used before its value is set if (MPI_File_set_view(fh, disp, MPI_INT, MPI_INT, "", info)); ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_File fh; MPI_Offset disp; MPI_Info info; if (MPI_File_set_view(fh, disp, MPI_INT, MPI_INT, "", info)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c", line 8: warning: variable "info" is used before its value is set if (MPI_File_open(MPI_COMM_SELF, "", 0, info, &fh)); ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_File fh; MPI_Info info; if (MPI_File_open(MPI_COMM_SELF, "", 0, info, &fh)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c", line 7: warning: variable "info" was declared but never referenced MPI_Info info; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_File fh; MPI_Info info; if (MPI_File_close(&fh)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_MPIIO" to "1" ================================================================================ TEST findMPIInc from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:452) TESTING: findMPIInc from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:452) Find MPI include paths from "mpicc -show" Executing: mpifcc -show stdout: /opt/FJSVtclang/GM-1.2.0-20/bin/fcc -Kident_mpi -mt -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lm -lnsl -lutil compilers: Checking arg /opt/FJSVtclang/GM-1.2.0-20/bin/fcc compilers: Checking arg -Kident_mpi compilers: Checking arg -mt compilers: Checking arg -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu compilers: Found include directory: /opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu compilers: Checking arg -L/opt/FJSVpxtof/sparc64fx/lib64 compilers: Checking arg -L/opt/FJSVtclang/GM-1.2.0-20/lib64 compilers: Checking arg -lmpi compilers: Checking arg -ltofucom compilers: Checking arg -ltofutop compilers: Checking arg -lm compilers: Checking arg -lnsl compilers: Checking arg -lutil ================================================================================ TEST checkMPICHorOpenMPI from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:427) TESTING: checkMPICHorOpenMPI from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:427) Determine if MPICH_NUMVERSION or OMPI_MAJOR_VERSION exist in mpi.h Used for consistency checking of MPI installation at compile time Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Possible ERROR while running compiler: exit code 512 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c", line 4: error: identifier "MPICH_NUMVERSION" is undefined int mpich_ver = MPICH_NUMVERSION; ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include int mpich_ver = MPICH_NUMVERSION; int main() { ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int ompi_major = OMPI_MAJOR_VERSION; int ompi_minor = OMPI_MINOR_VERSION; int ompi_release = OMPI_RELEASE_VERSION; int main() { ; return 0; } Source: #include "confdefs.h" #include "conffix.h" #include int ompi_major = OMPI_MAJOR_VERSION; int ompi_minor = OMPI_MINOR_VERSION; int ompi_release = OMPI_RELEASE_VERSION; Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c" #line 1 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 212 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef long ptrdiff_t; #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef int wchar_t; #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 225 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 1 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi_portable_platform.h" #line 343 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi_portable_platform.h" #line 386 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi_portable_platform.h" #line 258 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 278 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" typedef ptrdiff_t MPI_Aint; typedef long long MPI_Offset; typedef struct ompi_communicator_t *MPI_Comm; typedef struct ompi_datatype_t *MPI_Datatype; typedef struct ompi_errhandler_t *MPI_Errhandler; typedef struct ompi_file_t *MPI_File; typedef struct ompi_group_t *MPI_Group; typedef struct ompi_info_t *MPI_Info; typedef struct ompi_op_t *MPI_Op; typedef struct ompi_request_t *MPI_Request; typedef struct ompi_message_t *MPI_Message; typedef struct ompi_status_public_t MPI_Status; typedef struct ompi_win_t *MPI_Win; #pragma pack(4) struct ompi_status_public_t { int MPI_SOURCE; int MPI_TAG; int MPI_ERROR; unsigned long _cancelled : 1; unsigned long _ucount : 63; }; #pragma pack() typedef struct ompi_status_public_t ompi_status_public_t; typedef int (MPI_Copy_function)(MPI_Comm, int, void *, void *, void *, int *); typedef int (MPI_Delete_function)(MPI_Comm, int, void *, void *); typedef int (MPI_Datarep_extent_function)(MPI_Datatype, MPI_Aint *, void *); typedef int (MPI_Datarep_conversion_function)(void *, MPI_Datatype, int, void *, MPI_Offset, void *); typedef void (MPI_Comm_errhandler_function)(MPI_Comm *, int *, ...); typedef MPI_Comm_errhandler_function MPI_Comm_errhandler_fn ; typedef void (ompi_file_errhandler_fn)(MPI_File *, int *, ...); typedef ompi_file_errhandler_fn MPI_File_errhandler_fn ; typedef ompi_file_errhandler_fn MPI_File_errhandler_function; typedef void (MPI_Win_errhandler_function)(MPI_Win *, int *, ...); typedef MPI_Win_errhandler_function MPI_Win_errhandler_fn ; typedef void (MPI_Handler_function)(MPI_Comm *, int *, ...); typedef void (MPI_User_function)(void *, void *, int *, MPI_Datatype *); typedef int (MPI_Comm_copy_attr_function)(MPI_Comm, int, void *, void *, void *, int *); typedef int (MPI_Comm_delete_attr_function)(MPI_Comm, int, void *, void *); typedef int (MPI_Type_copy_attr_function)(MPI_Datatype, int, void *, void *, void *, int *); typedef int (MPI_Type_delete_attr_function)(MPI_Datatype, int, void *, void *); typedef int (MPI_Win_copy_attr_function)(MPI_Win, int, void *, void *, void *, int *); typedef int (MPI_Win_delete_attr_function)(MPI_Win, int, void *, void *); typedef int (MPI_Grequest_query_function)(void *, MPI_Status *); typedef int (MPI_Grequest_free_function)(void *); typedef int (MPI_Grequest_cancel_function)(void *, int); #line 432 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 453 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 469 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" enum { MPI_TAG_UB, MPI_HOST, MPI_IO, MPI_WTIME_IS_GLOBAL, MPI_APPNUM, MPI_LASTUSEDCODE, MPI_UNIVERSE_SIZE, MPI_WIN_BASE, MPI_WIN_SIZE, MPI_WIN_DISP_UNIT, IMPI_CLIENT_SIZE, IMPI_CLIENT_COLOR, IMPI_HOST_SIZE, IMPI_HOST_COLOR }; #line 582 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" enum { MPI_IDENT, MPI_CONGRUENT, MPI_SIMILAR, MPI_UNEQUAL }; enum { MPI_THREAD_SINGLE, MPI_THREAD_FUNNELED, MPI_THREAD_SERIALIZED, MPI_THREAD_MULTIPLE }; enum { MPI_COMBINER_NAMED, MPI_COMBINER_DUP, MPI_COMBINER_CONTIGUOUS, MPI_COMBINER_VECTOR, MPI_COMBINER_HVECTOR_INTEGER, MPI_COMBINER_HVECTOR, MPI_COMBINER_INDEXED, MPI_COMBINER_HINDEXED_INTEGER, MPI_COMBINER_HINDEXED, MPI_COMBINER_INDEXED_BLOCK, MPI_COMBINER_STRUCT_INTEGER, MPI_COMBINER_STRUCT, MPI_COMBINER_SUBARRAY, MPI_COMBINER_DARRAY, MPI_COMBINER_F90_REAL, MPI_COMBINER_F90_COMPLEX, MPI_COMBINER_F90_INTEGER, MPI_COMBINER_RESIZED, MPI_COMBINER_HINDEXED_BLOCK }; #line 649 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" int OMPI_C_MPI_TYPE_NULL_DELETE_FN( MPI_Datatype datatype, int type_keyval, void* attribute_val_out, void* extra_state ); int OMPI_C_MPI_TYPE_NULL_COPY_FN( MPI_Datatype datatype, int type_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); int OMPI_C_MPI_TYPE_DUP_FN( MPI_Datatype datatype, int type_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); int OMPI_C_MPI_COMM_NULL_DELETE_FN( MPI_Comm comm, int comm_keyval, void* attribute_val_out, void* extra_state ); int OMPI_C_MPI_COMM_NULL_COPY_FN( MPI_Comm comm, int comm_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); int OMPI_C_MPI_COMM_DUP_FN( MPI_Comm comm, int comm_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); int OMPI_C_MPI_NULL_DELETE_FN( MPI_Comm comm, int comm_keyval, void* attribute_val_out, void* extra_state ) ; int OMPI_C_MPI_NULL_COPY_FN( MPI_Comm comm, int comm_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ) ; int OMPI_C_MPI_DUP_FN( MPI_Comm comm, int comm_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ) ; int OMPI_C_MPI_WIN_NULL_DELETE_FN( MPI_Win window, int win_keyval, void* attribute_val_out, void* extra_state ); int OMPI_C_MPI_WIN_NULL_COPY_FN( MPI_Win window, int win_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); int OMPI_C_MPI_WIN_DUP_FN( MPI_Win window, int win_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); extern struct ompi_predefined_communicator_t ompi_mpi_comm_world; extern struct ompi_predefined_communicator_t ompi_mpi_comm_self; extern struct ompi_predefined_communicator_t ompi_mpi_comm_null; extern struct ompi_predefined_group_t ompi_mpi_group_empty; extern struct ompi_predefined_group_t ompi_mpi_group_null; extern struct ompi_predefined_request_t ompi_request_null; extern struct ompi_predefined_message_t ompi_message_null; extern struct ompi_predefined_message_t ompi_message_no_proc; extern struct ompi_predefined_op_t ompi_mpi_op_null; extern struct ompi_predefined_op_t ompi_mpi_op_min; extern struct ompi_predefined_op_t ompi_mpi_op_max; extern struct ompi_predefined_op_t ompi_mpi_op_sum; extern struct ompi_predefined_op_t ompi_mpi_op_prod; extern struct ompi_predefined_op_t ompi_mpi_op_land; extern struct ompi_predefined_op_t ompi_mpi_op_band; extern struct ompi_predefined_op_t ompi_mpi_op_lor; extern struct ompi_predefined_op_t ompi_mpi_op_bor; extern struct ompi_predefined_op_t ompi_mpi_op_lxor; extern struct ompi_predefined_op_t ompi_mpi_op_bxor; extern struct ompi_predefined_op_t ompi_mpi_op_maxloc; extern struct ompi_predefined_op_t ompi_mpi_op_minloc; extern struct ompi_predefined_op_t ompi_mpi_op_replace; extern struct ompi_predefined_datatype_t ompi_mpi_datatype_null; extern struct ompi_predefined_datatype_t ompi_mpi_lb ; extern struct ompi_predefined_datatype_t ompi_mpi_ub ; extern struct ompi_predefined_datatype_t ompi_mpi_char; extern struct ompi_predefined_datatype_t ompi_mpi_signed_char; extern struct ompi_predefined_datatype_t ompi_mpi_unsigned_char; extern struct ompi_predefined_datatype_t ompi_mpi_byte; extern struct ompi_predefined_datatype_t ompi_mpi_short; extern struct ompi_predefined_datatype_t ompi_mpi_unsigned_short; extern struct ompi_predefined_datatype_t ompi_mpi_int; extern struct ompi_predefined_datatype_t ompi_mpi_unsigned; extern struct ompi_predefined_datatype_t ompi_mpi_long; extern struct ompi_predefined_datatype_t ompi_mpi_unsigned_long; extern struct ompi_predefined_datatype_t ompi_mpi_long_long_int; extern struct ompi_predefined_datatype_t ompi_mpi_unsigned_long_long; extern struct ompi_predefined_datatype_t ompi_mpi_float; extern struct ompi_predefined_datatype_t ompi_mpi_double; extern struct ompi_predefined_datatype_t ompi_mpi_long_double; extern struct ompi_predefined_datatype_t ompi_mpi_wchar; extern struct ompi_predefined_datatype_t ompi_mpi_packed; extern struct ompi_predefined_datatype_t ompi_mpi_cxx_bool; extern struct ompi_predefined_datatype_t ompi_mpi_cxx_cplex; extern struct ompi_predefined_datatype_t ompi_mpi_cxx_dblcplex; extern struct ompi_predefined_datatype_t ompi_mpi_cxx_ldblcplex; extern struct ompi_predefined_datatype_t ompi_mpi_logic; extern struct ompi_predefined_datatype_t ompi_mpi_character; extern struct ompi_predefined_datatype_t ompi_mpi_integer; extern struct ompi_predefined_datatype_t ompi_mpi_real; extern struct ompi_predefined_datatype_t ompi_mpi_dblprec; extern struct ompi_predefined_datatype_t ompi_mpi_cplex; extern struct ompi_predefined_datatype_t ompi_mpi_dblcplex; extern struct ompi_predefined_datatype_t ompi_mpi_ldblcplex; extern struct ompi_predefined_datatype_t ompi_mpi_2int; extern struct ompi_predefined_datatype_t ompi_mpi_2integer; extern struct ompi_predefined_datatype_t ompi_mpi_2real; extern struct ompi_predefined_datatype_t ompi_mpi_2dblprec; extern struct ompi_predefined_datatype_t ompi_mpi_2cplex; extern struct ompi_predefined_datatype_t ompi_mpi_2dblcplex; extern struct ompi_predefined_datatype_t ompi_mpi_float_int; extern struct ompi_predefined_datatype_t ompi_mpi_double_int; extern struct ompi_predefined_datatype_t ompi_mpi_longdbl_int; extern struct ompi_predefined_datatype_t ompi_mpi_short_int; extern struct ompi_predefined_datatype_t ompi_mpi_long_int; extern struct ompi_predefined_datatype_t ompi_mpi_logical1; extern struct ompi_predefined_datatype_t ompi_mpi_logical2; extern struct ompi_predefined_datatype_t ompi_mpi_logical4; extern struct ompi_predefined_datatype_t ompi_mpi_logical8; extern struct ompi_predefined_datatype_t ompi_mpi_integer1; extern struct ompi_predefined_datatype_t ompi_mpi_integer2; extern struct ompi_predefined_datatype_t ompi_mpi_integer4; extern struct ompi_predefined_datatype_t ompi_mpi_integer8; extern struct ompi_predefined_datatype_t ompi_mpi_integer16; extern struct ompi_predefined_datatype_t ompi_mpi_real2; extern struct ompi_predefined_datatype_t ompi_mpi_real4; extern struct ompi_predefined_datatype_t ompi_mpi_real8; extern struct ompi_predefined_datatype_t ompi_mpi_real16; extern struct ompi_predefined_datatype_t ompi_mpi_complex8; extern struct ompi_predefined_datatype_t ompi_mpi_complex16; extern struct ompi_predefined_datatype_t ompi_mpi_complex32; extern struct ompi_predefined_datatype_t ompi_mpi_int8_t; extern struct ompi_predefined_datatype_t ompi_mpi_uint8_t; extern struct ompi_predefined_datatype_t ompi_mpi_int16_t; extern struct ompi_predefined_datatype_t ompi_mpi_uint16_t; extern struct ompi_predefined_datatype_t ompi_mpi_int32_t; extern struct ompi_predefined_datatype_t ompi_mpi_uint32_t; extern struct ompi_predefined_datatype_t ompi_mpi_int64_t; extern struct ompi_predefined_datatype_t ompi_mpi_uint64_t; extern struct ompi_predefined_datatype_t ompi_mpi_aint; extern struct ompi_predefined_datatype_t ompi_mpi_offset; extern struct ompi_predefined_datatype_t ompi_mpi_c_bool; extern struct ompi_predefined_datatype_t ompi_mpi_c_complex; extern struct ompi_predefined_datatype_t ompi_mpi_c_float_complex; extern struct ompi_predefined_datatype_t ompi_mpi_c_double_complex; extern struct ompi_predefined_datatype_t ompi_mpi_c_long_double_complex; extern struct ompi_predefined_errhandler_t ompi_mpi_errhandler_null; extern struct ompi_predefined_errhandler_t ompi_mpi_errors_are_fatal; extern struct ompi_predefined_errhandler_t ompi_mpi_errors_return; extern struct ompi_predefined_win_t ompi_mpi_win_null; extern struct ompi_predefined_file_t ompi_mpi_file_null; extern struct ompi_predefined_info_t ompi_mpi_info_null; extern int *MPI_F_STATUS_IGNORE; extern int *MPI_F_STATUSES_IGNORE; #line 921 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 954 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 1011 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 1038 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" int MPI_Abort(MPI_Comm comm, int errorcode); int MPI_Accumulate(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Op op, MPI_Win win); int MPI_Add_error_class(int *errorclass); int MPI_Add_error_code(int errorclass, int *errorcode); int MPI_Add_error_string(int errorcode, char *string); int MPI_Address(void *location, MPI_Aint *address) ; int MPI_Allgather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm); int MPI_Iallgather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int MPI_Allgatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, MPI_Comm comm); int MPI_Iallgatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int MPI_Alloc_mem(MPI_Aint size, MPI_Info info, void *baseptr); int MPI_Allreduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int MPI_Iallreduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int MPI_Alltoall(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm); int MPI_Ialltoall(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int MPI_Alltoallv(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype recvtype, MPI_Comm comm); int MPI_Ialltoallv(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int MPI_Alltoallw(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype *sendtypes, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype *recvtypes, MPI_Comm comm); int MPI_Ialltoallw(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype *sendtypes, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype *recvtypes, MPI_Comm comm, MPI_Request *request); int MPI_Attr_delete(MPI_Comm comm, int keyval) ; int MPI_Attr_get(MPI_Comm comm, int keyval, void *attribute_val, int *flag) ; int MPI_Attr_put(MPI_Comm comm, int keyval, void *attribute_val) ; int MPI_Barrier(MPI_Comm comm); int MPI_Ibarrier(MPI_Comm comm, MPI_Request *request); int MPI_Bcast(void *buffer, int count, MPI_Datatype datatype, int root, MPI_Comm comm); int MPI_Bsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int MPI_Ibcast(void *buffer, int count, MPI_Datatype datatype, int root, MPI_Comm comm, MPI_Request *request); int MPI_Bsend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Buffer_attach(void *buffer, int size); int MPI_Buffer_detach(void *buffer, int *size); int MPI_Cancel(MPI_Request *request); int MPI_Cart_coords(MPI_Comm comm, int rank, int maxdims, int *coords); int MPI_Cart_create(MPI_Comm old_comm, int ndims, int *dims, int *periods, int reorder, MPI_Comm *comm_cart); int MPI_Cart_get(MPI_Comm comm, int maxdims, int *dims, int *periods, int *coords); int MPI_Cart_map(MPI_Comm comm, int ndims, int *dims, int *periods, int *newrank); int MPI_Cart_rank(MPI_Comm comm, int *coords, int *rank); int MPI_Cart_shift(MPI_Comm comm, int direction, int disp, int *rank_source, int *rank_dest); int MPI_Cart_sub(MPI_Comm comm, int *remain_dims, MPI_Comm *new_comm); int MPI_Cartdim_get(MPI_Comm comm, int *ndims); int MPI_Close_port(char *port_name); int MPI_Comm_accept(char *port_name, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *newcomm); int MPI_Comm_c2f(MPI_Comm comm); int MPI_Comm_call_errhandler(MPI_Comm comm, int errorcode); int MPI_Comm_compare(MPI_Comm comm1, MPI_Comm comm2, int *result); int MPI_Comm_connect(char *port_name, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *newcomm); int MPI_Comm_create_errhandler(MPI_Comm_errhandler_function *function, MPI_Errhandler *errhandler); int MPI_Comm_create_keyval(MPI_Comm_copy_attr_function *comm_copy_attr_fn, MPI_Comm_delete_attr_function *comm_delete_attr_fn, int *comm_keyval, void *extra_state); int MPI_Comm_create(MPI_Comm comm, MPI_Group group, MPI_Comm *newcomm); int MPI_Comm_delete_attr(MPI_Comm comm, int comm_keyval); int MPI_Comm_disconnect(MPI_Comm *comm); int MPI_Comm_dup(MPI_Comm comm, MPI_Comm *newcomm); MPI_Comm MPI_Comm_f2c(int comm); int MPI_Comm_free_keyval(int *comm_keyval); int MPI_Comm_free(MPI_Comm *comm); int MPI_Comm_get_attr(MPI_Comm comm, int comm_keyval, void *attribute_val, int *flag); int MPI_Dist_graph_create(MPI_Comm comm_old, int n, int nodes[], int degrees[], int targets[], int weights[], MPI_Info info, int reorder, MPI_Comm * newcomm); int MPI_Dist_graph_create_adjacent(MPI_Comm comm_old, int indegree, int sources[], int sourceweights[], int outdegree, int destinations[], int destweights[], MPI_Info info, int reorder, MPI_Comm *comm_dist_graph); int MPI_Dist_graph_neighbors(MPI_Comm comm, int maxindegree, int sources[], int sourceweights[], int maxoutdegree, int destinations[], int destweights[]); int MPI_Dist_graph_neighbors_count(MPI_Comm comm, int *inneighbors, int *outneighbors, int *weighted); int MPI_Comm_get_errhandler(MPI_Comm comm, MPI_Errhandler *erhandler); int MPI_Comm_get_name(MPI_Comm comm, char *comm_name, int *resultlen); int MPI_Comm_get_parent(MPI_Comm *parent); int MPI_Comm_group(MPI_Comm comm, MPI_Group *group); int MPI_Comm_join(int fd, MPI_Comm *intercomm); int MPI_Comm_rank(MPI_Comm comm, int *rank); int MPI_Comm_remote_group(MPI_Comm comm, MPI_Group *group); int MPI_Comm_remote_size(MPI_Comm comm, int *size); int MPI_Comm_set_attr(MPI_Comm comm, int comm_keyval, void *attribute_val); int MPI_Comm_set_errhandler(MPI_Comm comm, MPI_Errhandler errhandler); int MPI_Comm_set_name(MPI_Comm comm, char *comm_name); int MPI_Comm_size(MPI_Comm comm, int *size); int MPI_Comm_spawn(char *command, char **argv, int maxprocs, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *intercomm, int *array_of_errcodes); int MPI_Comm_spawn_multiple(int count, char **array_of_commands, char ***array_of_argv, int *array_of_maxprocs, MPI_Info *array_of_info, int root, MPI_Comm comm, MPI_Comm *intercomm, int *array_of_errcodes); int MPI_Comm_split(MPI_Comm comm, int color, int key, MPI_Comm *newcomm); int MPI_Comm_test_inter(MPI_Comm comm, int *flag); int MPI_Dims_create(int nnodes, int ndims, int *dims); int MPI_Errhandler_c2f(MPI_Errhandler errhandler); int MPI_Errhandler_create(MPI_Handler_function *function, MPI_Errhandler *errhandler) ; MPI_Errhandler MPI_Errhandler_f2c(int errhandler); int MPI_Errhandler_free(MPI_Errhandler *errhandler); int MPI_Errhandler_get(MPI_Comm comm, MPI_Errhandler *errhandler) ; int MPI_Errhandler_set(MPI_Comm comm, MPI_Errhandler errhandler) ; int MPI_Error_class(int errorcode, int *errorclass); int MPI_Error_string(int errorcode, char *string, int *resultlen); int MPI_Exscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int MPI_Iexscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int MPI_File_c2f(MPI_File file); MPI_File MPI_File_f2c(int file); int MPI_File_call_errhandler(MPI_File fh, int errorcode); int MPI_File_create_errhandler(MPI_File_errhandler_function *function, MPI_Errhandler *errhandler); int MPI_File_set_errhandler( MPI_File file, MPI_Errhandler errhandler); int MPI_File_get_errhandler( MPI_File file, MPI_Errhandler *errhandler); int MPI_File_open(MPI_Comm comm, char *filename, int amode, MPI_Info info, MPI_File *fh); int MPI_File_close(MPI_File *fh); int MPI_File_delete(char *filename, MPI_Info info); int MPI_File_set_size(MPI_File fh, MPI_Offset size); int MPI_File_preallocate(MPI_File fh, MPI_Offset size); int MPI_File_get_size(MPI_File fh, MPI_Offset *size); int MPI_File_get_group(MPI_File fh, MPI_Group *group); int MPI_File_get_amode(MPI_File fh, int *amode); int MPI_File_set_info(MPI_File fh, MPI_Info info); int MPI_File_get_info(MPI_File fh, MPI_Info *info_used); int MPI_File_set_view(MPI_File fh, MPI_Offset disp, MPI_Datatype etype, MPI_Datatype filetype, char *datarep, MPI_Info info); int MPI_File_get_view(MPI_File fh, MPI_Offset *disp, MPI_Datatype *etype, MPI_Datatype *filetype, char *datarep); int MPI_File_read_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_read_at_all(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write_at_all(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_iread_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_iwrite_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_read(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_read_all(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write_all(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_iread(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_iwrite(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_seek(MPI_File fh, MPI_Offset offset, int whence); int MPI_File_get_position(MPI_File fh, MPI_Offset *offset); int MPI_File_get_byte_offset(MPI_File fh, MPI_Offset offset, MPI_Offset *disp); int MPI_File_read_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_iread_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_iwrite_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_read_ordered(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write_ordered(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_seek_shared(MPI_File fh, MPI_Offset offset, int whence); int MPI_File_get_position_shared(MPI_File fh, MPI_Offset *offset); int MPI_File_read_at_all_begin(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype); int MPI_File_read_at_all_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_write_at_all_begin(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype); int MPI_File_write_at_all_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_read_all_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int MPI_File_read_all_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_write_all_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int MPI_File_write_all_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_read_ordered_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int MPI_File_read_ordered_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_write_ordered_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int MPI_File_write_ordered_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_get_type_extent(MPI_File fh, MPI_Datatype datatype, MPI_Aint *extent); int MPI_File_set_atomicity(MPI_File fh, int flag); int MPI_File_get_atomicity(MPI_File fh, int *flag); int MPI_File_sync(MPI_File fh); int MPI_Finalize(void); int MPI_Finalized(int *flag); int MPI_Free_mem(void *base); int MPI_Gather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int MPI_Igather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int MPI_Gatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, int root, MPI_Comm comm); int MPI_Igatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int MPI_Get_address(void *location, MPI_Aint *address); int MPI_Get_count(MPI_Status *status, MPI_Datatype datatype, int *count); int MPI_Get_elements(MPI_Status *status, MPI_Datatype datatype, int *count); int MPI_Get(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Win win); int MPI_Get_processor_name(char *name, int *resultlen); int MPI_Get_version(int *version, int *subversion); int MPI_Graph_create(MPI_Comm comm_old, int nnodes, int *index, int *edges, int reorder, MPI_Comm *comm_graph); int MPI_Graph_get(MPI_Comm comm, int maxindex, int maxedges, int *index, int *edges); int MPI_Graph_map(MPI_Comm comm, int nnodes, int *index, int *edges, int *newrank); int MPI_Graph_neighbors_count(MPI_Comm comm, int rank, int *nneighbors); int MPI_Graph_neighbors(MPI_Comm comm, int rank, int maxneighbors, int *neighbors); int MPI_Graphdims_get(MPI_Comm comm, int *nnodes, int *nedges); int MPI_Grequest_complete(MPI_Request request); int MPI_Grequest_start(MPI_Grequest_query_function *query_fn, MPI_Grequest_free_function *free_fn, MPI_Grequest_cancel_function *cancel_fn, void *extra_state, MPI_Request *request); int MPI_Group_c2f(MPI_Group group); int MPI_Group_compare(MPI_Group group1, MPI_Group group2, int *result); int MPI_Group_difference(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int MPI_Group_excl(MPI_Group group, int n, int *ranks, MPI_Group *newgroup); MPI_Group MPI_Group_f2c(int group); int MPI_Group_free(MPI_Group *group); int MPI_Group_incl(MPI_Group group, int n, int *ranks, MPI_Group *newgroup); int MPI_Group_intersection(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int MPI_Group_range_excl(MPI_Group group, int n, int ranges[][3], MPI_Group *newgroup); int MPI_Group_range_incl(MPI_Group group, int n, int ranges[][3], MPI_Group *newgroup); int MPI_Group_rank(MPI_Group group, int *rank); int MPI_Group_size(MPI_Group group, int *size); int MPI_Group_translate_ranks(MPI_Group group1, int n, int *ranks1, MPI_Group group2, int *ranks2); int MPI_Group_union(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int MPI_Ibsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Improbe(int source, int tag, MPI_Comm comm, int *flag, MPI_Message *message, MPI_Status *status); int MPI_Imrecv(void *buf, int count, MPI_Datatype type, MPI_Message *message, MPI_Request *request); int MPI_Info_c2f(MPI_Info info); int MPI_Info_create(MPI_Info *info); int MPI_Info_delete(MPI_Info info, char *key); int MPI_Info_dup(MPI_Info info, MPI_Info *newinfo); MPI_Info MPI_Info_f2c(int info); int MPI_Info_free(MPI_Info *info); int MPI_Info_get(MPI_Info info, char *key, int valuelen, char *value, int *flag); int MPI_Info_get_nkeys(MPI_Info info, int *nkeys); int MPI_Info_get_nthkey(MPI_Info info, int n, char *key); int MPI_Info_get_valuelen(MPI_Info info, char *key, int *valuelen, int *flag); int MPI_Info_set(MPI_Info info, char *key, char *value); int MPI_Init(int *argc, char ***argv); int MPI_Initialized(int *flag); int MPI_Init_thread(int *argc, char ***argv, int required, int *provided); int MPI_Intercomm_create(MPI_Comm local_comm, int local_leader, MPI_Comm bridge_comm, int remote_leader, int tag, MPI_Comm *newintercomm); int MPI_Intercomm_merge(MPI_Comm intercomm, int high, MPI_Comm *newintercomm); int MPI_Iprobe(int source, int tag, MPI_Comm comm, int *flag, MPI_Status *status); int MPI_Irecv(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Irsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Isend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Issend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Is_thread_main(int *flag); int MPI_Keyval_create(MPI_Copy_function *copy_fn, MPI_Delete_function *delete_fn, int *keyval, void *extra_state) ; int MPI_Keyval_free(int *keyval) ; int MPI_Lookup_name(char *service_name, MPI_Info info, char *port_name); int MPI_Message_c2f(MPI_Message message); MPI_Message MPI_Message_f2c(int message); int MPI_Mprobe(int source, int tag, MPI_Comm comm, MPI_Message *message, MPI_Status *status); int MPI_Mrecv(void *buf, int count, MPI_Datatype type, MPI_Message *message, MPI_Status *status); int MPI_Op_c2f(MPI_Op op); int MPI_Op_commutative(MPI_Op op, int *commute); int MPI_Op_create(MPI_User_function *function, int commute, MPI_Op *op); int MPI_Open_port(MPI_Info info, char *port_name); MPI_Op MPI_Op_f2c(int op); int MPI_Op_free(MPI_Op *op); int MPI_Pack_external(char *datarep, void *inbuf, int incount, MPI_Datatype datatype, void *outbuf, MPI_Aint outsize, MPI_Aint *position); int MPI_Pack_external_size(char *datarep, int incount, MPI_Datatype datatype, MPI_Aint *size); int MPI_Pack(void *inbuf, int incount, MPI_Datatype datatype, void *outbuf, int outsize, int *position, MPI_Comm comm); int MPI_Pack_size(int incount, MPI_Datatype datatype, MPI_Comm comm, int *size); int MPI_Pcontrol(const int level, ...); int MPI_Probe(int source, int tag, MPI_Comm comm, MPI_Status *status); int MPI_Publish_name(char *service_name, MPI_Info info, char *port_name); int MPI_Put(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Win win); int MPI_Query_thread(int *provided); int MPI_Recv_init(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Recv(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Status *status); int MPI_Reduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, int root, MPI_Comm comm); int MPI_Ireduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, int root, MPI_Comm comm, MPI_Request *request); int MPI_Reduce_local(void *inbuf, void *inoutbuf, int count, MPI_Datatype datatype, MPI_Op op); int MPI_Reduce_scatter(void *sendbuf, void *recvbuf, int *recvcounts, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int MPI_Ireduce_scatter(void *sendbuf, void *recvbuf, int *recvcounts, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int MPI_Reduce_scatter_block(void *sendbuf, void *recvbuf, int recvcount, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int MPI_Ireduce_scatter_block(void *sendbuf, void *recvbuf, int recvcount, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int MPI_Register_datarep(char *datarep, MPI_Datarep_conversion_function *read_conversion_fn, MPI_Datarep_conversion_function *write_conversion_fn, MPI_Datarep_extent_function *dtype_file_extent_fn, void *extra_state); int MPI_Request_c2f(MPI_Request request); MPI_Request MPI_Request_f2c(int request); int MPI_Request_free(MPI_Request *request); int MPI_Request_get_status(MPI_Request request, int *flag, MPI_Status *status); int MPI_Rsend(void *ibuf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int MPI_Rsend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Scan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int MPI_Iscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int MPI_Scatter(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int MPI_Iscatter(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int MPI_Scatterv(void *sendbuf, int *sendcounts, int *displs, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int MPI_Iscatterv(void *sendbuf, int *sendcounts, int *displs, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int MPI_Send_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Send(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int MPI_Sendrecv(void *sendbuf, int sendcount, MPI_Datatype sendtype, int dest, int sendtag, void *recvbuf, int recvcount, MPI_Datatype recvtype, int source, int recvtag, MPI_Comm comm, MPI_Status *status); int MPI_Sendrecv_replace(void * buf, int count, MPI_Datatype datatype, int dest, int sendtag, int source, int recvtag, MPI_Comm comm, MPI_Status *status); int MPI_Ssend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Ssend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int MPI_Start(MPI_Request *request); int MPI_Startall(int count, MPI_Request *array_of_requests); int MPI_Status_c2f(MPI_Status *c_status, int *f_status); int MPI_Status_f2c(int *f_status, MPI_Status *c_status); int MPI_Status_set_cancelled(MPI_Status *status, int flag); int MPI_Status_set_elements(MPI_Status *status, MPI_Datatype datatype, int count); int MPI_Testall(int count, MPI_Request array_of_requests[], int *flag, MPI_Status array_of_statuses[]); int MPI_Testany(int count, MPI_Request array_of_requests[], int *index, int *flag, MPI_Status *status); int MPI_Test(MPI_Request *request, int *flag, MPI_Status *status); int MPI_Test_cancelled(MPI_Status *status, int *flag); int MPI_Testsome(int incount, MPI_Request array_of_requests[], int *outcount, int array_of_indices[], MPI_Status array_of_statuses[]); int MPI_Topo_test(MPI_Comm comm, int *status); int MPI_Type_c2f(MPI_Datatype datatype); int MPI_Type_commit(MPI_Datatype *type); int MPI_Type_contiguous(int count, MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_darray(int size, int rank, int ndims, int gsize_array[], int distrib_array[], int darg_array[], int psize_array[], int order, MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_f90_complex(int p, int r, MPI_Datatype *newtype); int MPI_Type_create_f90_integer(int r, MPI_Datatype *newtype); int MPI_Type_create_f90_real(int p, int r, MPI_Datatype *newtype); int MPI_Type_create_hindexed(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_hvector(int count, int blocklength, MPI_Aint stride, MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_keyval(MPI_Type_copy_attr_function *type_copy_attr_fn, MPI_Type_delete_attr_function *type_delete_attr_fn, int *type_keyval, void *extra_state); int MPI_Type_create_indexed_block(int count, int blocklength, int array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_struct(int count, int array_of_block_lengths[], MPI_Aint array_of_displacements[], MPI_Datatype array_of_types[], MPI_Datatype *newtype); int MPI_Type_create_subarray(int ndims, int size_array[], int subsize_array[], int start_array[], int order, MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_resized(MPI_Datatype oldtype, MPI_Aint lb, MPI_Aint extent, MPI_Datatype *newtype); int MPI_Type_delete_attr(MPI_Datatype type, int type_keyval); int MPI_Type_dup(MPI_Datatype type, MPI_Datatype *newtype); int MPI_Type_extent(MPI_Datatype type, MPI_Aint *extent) ; int MPI_Type_free(MPI_Datatype *type); int MPI_Type_free_keyval(int *type_keyval); MPI_Datatype MPI_Type_f2c(int datatype); int MPI_Type_get_attr(MPI_Datatype type, int type_keyval, void *attribute_val, int *flag); int MPI_Type_get_contents(MPI_Datatype mtype, int max_integers, int max_addresses, int max_datatypes, int array_of_integers[], MPI_Aint array_of_addresses[], MPI_Datatype array_of_datatypes[]); int MPI_Type_get_envelope(MPI_Datatype type, int *num_integers, int *num_addresses, int *num_datatypes, int *combiner); int MPI_Type_get_extent(MPI_Datatype type, MPI_Aint *lb, MPI_Aint *extent); int MPI_Type_get_name(MPI_Datatype type, char *type_name, int *resultlen); int MPI_Type_get_true_extent(MPI_Datatype datatype, MPI_Aint *true_lb, MPI_Aint *true_extent); int MPI_Type_hindexed(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype) ; int MPI_Type_hvector(int count, int blocklength, MPI_Aint stride, MPI_Datatype oldtype, MPI_Datatype *newtype) ; int MPI_Type_indexed(int count, int array_of_blocklengths[], int array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_lb(MPI_Datatype type, MPI_Aint *lb) ; int MPI_Type_match_size(int typeclass, int size, MPI_Datatype *type); int MPI_Type_set_attr(MPI_Datatype type, int type_keyval, void *attr_val); int MPI_Type_set_name(MPI_Datatype type, char *type_name); int MPI_Type_size(MPI_Datatype type, int *size); int MPI_Type_struct(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype array_of_types[], MPI_Datatype *newtype) ; int MPI_Type_ub(MPI_Datatype mtype, MPI_Aint *ub) ; int MPI_Type_vector(int count, int blocklength, int stride, MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Unpack(void *inbuf, int insize, int *position, void *outbuf, int outcount, MPI_Datatype datatype, MPI_Comm comm); int MPI_Unpublish_name(char *service_name, MPI_Info info, char *port_name); int MPI_Unpack_external (char *datarep, void *inbuf, MPI_Aint insize, MPI_Aint *position, void *outbuf, int outcount, MPI_Datatype datatype); int MPI_Waitall(int count, MPI_Request *array_of_requests, MPI_Status *array_of_statuses); int MPI_Waitany(int count, MPI_Request *array_of_requests, int *index, MPI_Status *status); int MPI_Wait(MPI_Request *request, MPI_Status *status); int MPI_Waitsome(int incount, MPI_Request *array_of_requests, int *outcount, int *array_of_indices, MPI_Status *array_of_statuses); int MPI_Win_c2f(MPI_Win win); int MPI_Win_call_errhandler(MPI_Win win, int errorcode); int MPI_Win_complete(MPI_Win win); int MPI_Win_create(void *base, MPI_Aint size, int disp_unit, MPI_Info info, MPI_Comm comm, MPI_Win *win); int MPI_Win_create_errhandler(MPI_Win_errhandler_function *function, MPI_Errhandler *errhandler); int MPI_Win_create_keyval(MPI_Win_copy_attr_function *win_copy_attr_fn, MPI_Win_delete_attr_function *win_delete_attr_fn, int *win_keyval, void *extra_state); int MPI_Win_delete_attr(MPI_Win win, int win_keyval); MPI_Win MPI_Win_f2c(int win); int MPI_Win_fence(int assert, MPI_Win win); int MPI_Win_free(MPI_Win *win); int MPI_Win_free_keyval(int *win_keyval); int MPI_Win_get_attr(MPI_Win win, int win_keyval, void *attribute_val, int *flag); int MPI_Win_get_errhandler(MPI_Win win, MPI_Errhandler *errhandler); int MPI_Win_get_group(MPI_Win win, MPI_Group *group); int MPI_Win_get_name(MPI_Win win, char *win_name, int *resultlen); int MPI_Win_lock(int lock_type, int rank, int assert, MPI_Win win); int MPI_Win_post(MPI_Group group, int assert, MPI_Win win); int MPI_Win_set_attr(MPI_Win win, int win_keyval, void *attribute_val); int MPI_Win_set_errhandler(MPI_Win win, MPI_Errhandler errhandler); int MPI_Win_set_name(MPI_Win win, char *win_name); int MPI_Win_start(MPI_Group group, int assert, MPI_Win win); int MPI_Win_test(MPI_Win win, int *flag); int MPI_Win_unlock(int rank, MPI_Win win); int MPI_Win_wait(MPI_Win win); double MPI_Wtick(void); double MPI_Wtime(void); int PMPI_Abort(MPI_Comm comm, int errorcode); int PMPI_Accumulate(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Op op, MPI_Win win); int PMPI_Add_error_class(int *errorclass); int PMPI_Add_error_code(int errorclass, int *errorcode); int PMPI_Add_error_string(int errorcode, char *string); int PMPI_Address(void *location, MPI_Aint *address) ; int PMPI_Allgather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm); int PMPI_Iallgather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int PMPI_Allgatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, MPI_Comm comm); int PMPI_Iallgatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int PMPI_Alloc_mem(MPI_Aint size, MPI_Info info, void *baseptr); int PMPI_Allreduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int PMPI_Iallreduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int PMPI_Alltoall(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm); int PMPI_Ialltoall(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int PMPI_Alltoallv(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype recvtype, MPI_Comm comm); int PMPI_Ialltoallv(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int PMPI_Alltoallw(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype *sendtypes, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype *recvtypes, MPI_Comm comm); int PMPI_Ialltoallw(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype *sendtypes, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype *recvtypes, MPI_Comm comm, MPI_Request *request); int PMPI_Attr_delete(MPI_Comm comm, int keyval) ; int PMPI_Attr_get(MPI_Comm comm, int keyval, void *attribute_val, int *flag) ; int PMPI_Dist_graph_create(MPI_Comm comm_old, int n, int nodes[], int degrees[], int targets[], int weights[], MPI_Info info, int reorder, MPI_Comm * newcomm); int PMPI_Dist_graph_create_adjacent(MPI_Comm comm_old, int indegree, int sources[], int sourceweights[], int outdegree, int destinations[], int destweights[], MPI_Info info, int reorder, MPI_Comm *comm_dist_graph); int PMPI_Dist_graph_neighbors(MPI_Comm comm, int maxindegree, int sources[], int sourceweights[], int maxoutdegree, int destinations[], int destweights[]); int PMPI_Dist_graph_neighbors_count(MPI_Comm comm, int *inneighbors, int *outneighbors, int *weighted); int PMPI_Attr_put(MPI_Comm comm, int keyval, void *attribute_val) ; int PMPI_Barrier(MPI_Comm comm); int PMPI_Ibarrier(MPI_Comm comm, MPI_Request *request); int PMPI_Bcast(void *buffer, int count, MPI_Datatype datatype, int root, MPI_Comm comm); int PMPI_Ibcast(void *buffer, int count, MPI_Datatype datatype, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Bsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int PMPI_Bsend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Buffer_attach(void *buffer, int size); int PMPI_Buffer_detach(void *buffer, int *size); int PMPI_Cancel(MPI_Request *request); int PMPI_Cart_coords(MPI_Comm comm, int rank, int maxdims, int *coords); int PMPI_Cart_create(MPI_Comm old_comm, int ndims, int *dims, int *periods, int reorder, MPI_Comm *comm_cart); int PMPI_Cart_get(MPI_Comm comm, int maxdims, int *dims, int *periods, int *coords); int PMPI_Cart_map(MPI_Comm comm, int ndims, int *dims, int *periods, int *newrank); int PMPI_Cart_rank(MPI_Comm comm, int *coords, int *rank); int PMPI_Cart_shift(MPI_Comm comm, int direction, int disp, int *rank_source, int *rank_dest); int PMPI_Cart_sub(MPI_Comm comm, int *remain_dims, MPI_Comm *new_comm); int PMPI_Cartdim_get(MPI_Comm comm, int *ndims); int PMPI_Close_port(char *port_name); int PMPI_Comm_accept(char *port_name, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *newcomm); int PMPI_Comm_c2f(MPI_Comm comm); int PMPI_Comm_call_errhandler(MPI_Comm comm, int errorcode); int PMPI_Comm_compare(MPI_Comm comm1, MPI_Comm comm2, int *result); int PMPI_Comm_connect(char *port_name, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *newcomm); int PMPI_Comm_create_errhandler(MPI_Comm_errhandler_function *function, MPI_Errhandler *errhandler); int PMPI_Comm_create_keyval(MPI_Comm_copy_attr_function *comm_copy_attr_fn, MPI_Comm_delete_attr_function *comm_delete_attr_fn, int *comm_keyval, void *extra_state); int PMPI_Comm_create(MPI_Comm comm, MPI_Group group, MPI_Comm *newcomm); int PMPI_Comm_delete_attr(MPI_Comm comm, int comm_keyval); int PMPI_Comm_disconnect(MPI_Comm *comm); int PMPI_Comm_dup(MPI_Comm comm, MPI_Comm *newcomm); MPI_Comm PMPI_Comm_f2c(int comm); int PMPI_Comm_free_keyval(int *comm_keyval); int PMPI_Comm_free(MPI_Comm *comm); int PMPI_Comm_get_attr(MPI_Comm comm, int comm_keyval, void *attribute_val, int *flag); int PMPI_Comm_get_errhandler(MPI_Comm comm, MPI_Errhandler *erhandler); int PMPI_Comm_get_name(MPI_Comm comm, char *comm_name, int *resultlen); int PMPI_Comm_get_parent(MPI_Comm *parent); int PMPI_Comm_group(MPI_Comm comm, MPI_Group *group); int PMPI_Comm_join(int fd, MPI_Comm *intercomm); int PMPI_Comm_rank(MPI_Comm comm, int *rank); int PMPI_Comm_remote_group(MPI_Comm comm, MPI_Group *group); int PMPI_Comm_remote_size(MPI_Comm comm, int *size); int PMPI_Comm_set_attr(MPI_Comm comm, int comm_keyval, void *attribute_val); int PMPI_Comm_set_errhandler(MPI_Comm comm, MPI_Errhandler errhandler); int PMPI_Comm_set_name(MPI_Comm comm, char *comm_name); int PMPI_Comm_size(MPI_Comm comm, int *size); int PMPI_Comm_spawn(char *command, char **argv, int maxprocs, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *intercomm, int *array_of_errcodes); int PMPI_Comm_spawn_multiple(int count, char **array_of_commands, char ***array_of_argv, int *array_of_maxprocs, MPI_Info *array_of_info, int root, MPI_Comm comm, MPI_Comm *intercomm, int *array_of_errcodes); int PMPI_Comm_split(MPI_Comm comm, int color, int key, MPI_Comm *newcomm); int PMPI_Comm_test_inter(MPI_Comm comm, int *flag); int PMPI_Dims_create(int nnodes, int ndims, int *dims); int PMPI_Errhandler_c2f(MPI_Errhandler errhandler); int PMPI_Errhandler_create(MPI_Handler_function *function, MPI_Errhandler *errhandler) ; MPI_Errhandler PMPI_Errhandler_f2c(int errhandler); int PMPI_Errhandler_free(MPI_Errhandler *errhandler); int PMPI_Errhandler_get(MPI_Comm comm, MPI_Errhandler *errhandler) ; int PMPI_Errhandler_set(MPI_Comm comm, MPI_Errhandler errhandler) ; int PMPI_Error_class(int errorcode, int *errorclass); int PMPI_Error_string(int errorcode, char *string, int *resultlen); int PMPI_Exscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int PMPI_Iexscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int PMPI_File_c2f(MPI_File file); MPI_File PMPI_File_f2c(int file); int PMPI_File_call_errhandler(MPI_File fh, int errorcode); int PMPI_File_create_errhandler(MPI_File_errhandler_function *function, MPI_Errhandler *errhandler); int PMPI_File_set_errhandler( MPI_File file, MPI_Errhandler errhandler); int PMPI_File_get_errhandler( MPI_File file, MPI_Errhandler *errhandler); int PMPI_File_open(MPI_Comm comm, char *filename, int amode, MPI_Info info, MPI_File *fh); int PMPI_File_close(MPI_File *fh); int PMPI_File_delete(char *filename, MPI_Info info); int PMPI_File_set_size(MPI_File fh, MPI_Offset size); int PMPI_File_preallocate(MPI_File fh, MPI_Offset size); int PMPI_File_get_size(MPI_File fh, MPI_Offset *size); int PMPI_File_get_group(MPI_File fh, MPI_Group *group); int PMPI_File_get_amode(MPI_File fh, int *amode); int PMPI_File_set_info(MPI_File fh, MPI_Info info); int PMPI_File_get_info(MPI_File fh, MPI_Info *info_used); int PMPI_File_set_view(MPI_File fh, MPI_Offset disp, MPI_Datatype etype, MPI_Datatype filetype, char *datarep, MPI_Info info); int PMPI_File_get_view(MPI_File fh, MPI_Offset *disp, MPI_Datatype *etype, MPI_Datatype *filetype, char *datarep); int PMPI_File_read_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_read_at_all(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write_at_all(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_iread_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_iwrite_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_read(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_read_all(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write_all(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_iread(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_iwrite(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_seek(MPI_File fh, MPI_Offset offset, int whence); int PMPI_File_get_position(MPI_File fh, MPI_Offset *offset); int PMPI_File_get_byte_offset(MPI_File fh, MPI_Offset offset, MPI_Offset *disp); int PMPI_File_read_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_iread_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_iwrite_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_read_ordered(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write_ordered(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_seek_shared(MPI_File fh, MPI_Offset offset, int whence); int PMPI_File_get_position_shared(MPI_File fh, MPI_Offset *offset); int PMPI_File_read_at_all_begin(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype); int PMPI_File_read_at_all_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_write_at_all_begin(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype); int PMPI_File_write_at_all_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_read_all_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int PMPI_File_read_all_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_write_all_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int PMPI_File_write_all_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_read_ordered_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int PMPI_File_read_ordered_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_write_ordered_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int PMPI_File_write_ordered_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_get_type_extent(MPI_File fh, MPI_Datatype datatype, MPI_Aint *extent); int PMPI_File_set_atomicity(MPI_File fh, int flag); int PMPI_File_get_atomicity(MPI_File fh, int *flag); int PMPI_File_sync(MPI_File fh); int PMPI_Finalize(void); int PMPI_Finalized(int *flag); int PMPI_Free_mem(void *base); int PMPI_Gather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int PMPI_Igather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Gatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, int root, MPI_Comm comm); int PMPI_Igatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Get_address(void *location, MPI_Aint *address); int PMPI_Get_count(MPI_Status *status, MPI_Datatype datatype, int *count); int PMPI_Get_elements(MPI_Status *status, MPI_Datatype datatype, int *count); int PMPI_Get(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Win win); int PMPI_Get_processor_name(char *name, int *resultlen); int PMPI_Get_version(int *version, int *subversion); int PMPI_Graph_create(MPI_Comm comm_old, int nnodes, int *index, int *edges, int reorder, MPI_Comm *comm_graph); int PMPI_Graph_get(MPI_Comm comm, int maxindex, int maxedges, int *index, int *edges); int PMPI_Graph_map(MPI_Comm comm, int nnodes, int *index, int *edges, int *newrank); int PMPI_Graph_neighbors_count(MPI_Comm comm, int rank, int *nneighbors); int PMPI_Graph_neighbors(MPI_Comm comm, int rank, int maxneighbors, int *neighbors); int PMPI_Graphdims_get(MPI_Comm comm, int *nnodes, int *nedges); int PMPI_Grequest_complete(MPI_Request request); int PMPI_Grequest_start(MPI_Grequest_query_function *query_fn, MPI_Grequest_free_function *free_fn, MPI_Grequest_cancel_function *cancel_fn, void *extra_state, MPI_Request *request); int PMPI_Group_c2f(MPI_Group group); int PMPI_Group_compare(MPI_Group group1, MPI_Group group2, int *result); int PMPI_Group_difference(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int PMPI_Group_excl(MPI_Group group, int n, int *ranks, MPI_Group *newgroup); MPI_Group PMPI_Group_f2c(int group); int PMPI_Group_free(MPI_Group *group); int PMPI_Group_incl(MPI_Group group, int n, int *ranks, MPI_Group *newgroup); int PMPI_Group_intersection(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int PMPI_Group_range_excl(MPI_Group group, int n, int ranges[][3], MPI_Group *newgroup); int PMPI_Group_range_incl(MPI_Group group, int n, int ranges[][3], MPI_Group *newgroup); int PMPI_Group_rank(MPI_Group group, int *rank); int PMPI_Group_size(MPI_Group group, int *size); int PMPI_Group_translate_ranks(MPI_Group group1, int n, int *ranks1, MPI_Group group2, int *ranks2); int PMPI_Group_union(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int PMPI_Ibsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Improbe(int source, int tag, MPI_Comm comm, int *flag, MPI_Message *message, MPI_Status *status); int PMPI_Imrecv(void *buf, int count, MPI_Datatype type, MPI_Message *message, MPI_Request *request); int PMPI_Info_c2f(MPI_Info info); int PMPI_Info_create(MPI_Info *info); int PMPI_Info_delete(MPI_Info info, char *key); int PMPI_Info_dup(MPI_Info info, MPI_Info *newinfo); MPI_Info PMPI_Info_f2c(int info); int PMPI_Info_free(MPI_Info *info); int PMPI_Info_get(MPI_Info info, char *key, int valuelen, char *value, int *flag); int PMPI_Info_get_nkeys(MPI_Info info, int *nkeys); int PMPI_Info_get_nthkey(MPI_Info info, int n, char *key); int PMPI_Info_get_valuelen(MPI_Info info, char *key, int *valuelen, int *flag); int PMPI_Info_set(MPI_Info info, char *key, char *value); int PMPI_Init(int *argc, char ***argv); int PMPI_Initialized(int *flag); int PMPI_Init_thread(int *argc, char ***argv, int required, int *provided); int PMPI_Intercomm_create(MPI_Comm local_comm, int local_leader, MPI_Comm bridge_comm, int remote_leader, int tag, MPI_Comm *newintercomm); int PMPI_Intercomm_merge(MPI_Comm intercomm, int high, MPI_Comm *newintercomm); int PMPI_Iprobe(int source, int tag, MPI_Comm comm, int *flag, MPI_Status *status); int PMPI_Irecv(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Irsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Isend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Issend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Is_thread_main(int *flag); int PMPI_Keyval_create(MPI_Copy_function *copy_fn, MPI_Delete_function *delete_fn, int *keyval, void *extra_state) ; int PMPI_Keyval_free(int *keyval) ; int PMPI_Lookup_name(char *service_name, MPI_Info info, char *port_name); int PMPI_Message_c2f(MPI_Message message); MPI_Message PMPI_Message_f2c(int message); int PMPI_Mprobe(int source, int tag, MPI_Comm comm, MPI_Message *message, MPI_Status *status); int PMPI_Mrecv(void *buf, int count, MPI_Datatype type, MPI_Message *message, MPI_Status *status); int PMPI_Op_c2f(MPI_Op op); int PMPI_Op_commutative(MPI_Op op, int *commute); int PMPI_Op_create(MPI_User_function *function, int commute, MPI_Op *op); int PMPI_Open_port(MPI_Info info, char *port_name); MPI_Op PMPI_Op_f2c(int op); int PMPI_Op_free(MPI_Op *op); int PMPI_Pack_external(char *datarep, void *inbuf, int incount, MPI_Datatype datatype, void *outbuf, MPI_Aint outsize, MPI_Aint *position); int PMPI_Pack_external_size(char *datarep, int incount, MPI_Datatype datatype, MPI_Aint *size); int PMPI_Pack(void *inbuf, int incount, MPI_Datatype datatype, void *outbuf, int outsize, int *position, MPI_Comm comm); int PMPI_Pack_size(int incount, MPI_Datatype datatype, MPI_Comm comm, int *size); int PMPI_Pcontrol(const int level, ...); int PMPI_Probe(int source, int tag, MPI_Comm comm, MPI_Status *status); int PMPI_Publish_name(char *service_name, MPI_Info info, char *port_name); int PMPI_Put(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Win win); int PMPI_Query_thread(int *provided); int PMPI_Recv_init(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Recv(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Status *status); int PMPI_Reduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, int root, MPI_Comm comm); int PMPI_Ireduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Reduce_local(void *inbuf, void *inoutbuf, int count, MPI_Datatype datatype, MPI_Op); int PMPI_Reduce_scatter(void *sendbuf, void *recvbuf, int *recvcounts, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int PMPI_Ireduce_scatter(void *sendbuf, void *recvbuf, int *recvcounts, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int PMPI_Reduce_scatter_block(void *sendbuf, void *recvbuf, int recvcount, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int PMPI_Ireduce_scatter_block(void *sendbuf, void *recvbuf, int recvcount, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int PMPI_Register_datarep(char *datarep, MPI_Datarep_conversion_function *read_conversion_fn, MPI_Datarep_conversion_function *write_conversion_fn, MPI_Datarep_extent_function *dtype_file_extent_fn, void *extra_state); int PMPI_Request_c2f(MPI_Request request); MPI_Request PMPI_Request_f2c(int request); int PMPI_Request_free(MPI_Request *request); int PMPI_Request_get_status(MPI_Request request, int *flag, MPI_Status *status); int PMPI_Rsend(void *ibuf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int PMPI_Rsend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Scan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int PMPI_Iscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int PMPI_Scatter(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int PMPI_Iscatter(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Scatterv(void *sendbuf, int *sendcounts, int *displs, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int PMPI_Iscatterv(void *sendbuf, int *sendcounts, int *displs, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Send_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Send(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int PMPI_Sendrecv(void *sendbuf, int sendcount, MPI_Datatype sendtype, int dest, int sendtag, void *recvbuf, int recvcount, MPI_Datatype recvtype, int source, int recvtag, MPI_Comm comm, MPI_Status *status); int PMPI_Sendrecv_replace(void * buf, int count, MPI_Datatype datatype, int dest, int sendtag, int source, int recvtag, MPI_Comm comm, MPI_Status *status); int PMPI_Ssend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Ssend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int PMPI_Start(MPI_Request *request); int PMPI_Startall(int count, MPI_Request *array_of_requests); int PMPI_Status_c2f(MPI_Status *c_status, int *f_status); int PMPI_Status_f2c(int *f_status, MPI_Status *c_status); int PMPI_Status_set_cancelled(MPI_Status *status, int flag); int PMPI_Status_set_elements(MPI_Status *status, MPI_Datatype datatype, int count); int PMPI_Testall(int count, MPI_Request array_of_requests[], int *flag, MPI_Status array_of_statuses[]); int PMPI_Testany(int count, MPI_Request array_of_requests[], int *index, int *flag, MPI_Status *status); int PMPI_Test(MPI_Request *request, int *flag, MPI_Status *status); int PMPI_Test_cancelled(MPI_Status *status, int *flag); int PMPI_Testsome(int incount, MPI_Request array_of_requests[], int *outcount, int array_of_indices[], MPI_Status array_of_statuses[]); int PMPI_Topo_test(MPI_Comm comm, int *status); int PMPI_Type_c2f(MPI_Datatype datatype); int PMPI_Type_commit(MPI_Datatype *type); int PMPI_Type_contiguous(int count, MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_darray(int size, int rank, int ndims, int gsize_array[], int distrib_array[], int darg_array[], int psize_array[], int order, MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_f90_complex(int p, int r, MPI_Datatype *newtype); int PMPI_Type_create_f90_integer(int r, MPI_Datatype *newtype); int PMPI_Type_create_f90_real(int p, int r, MPI_Datatype *newtype); int PMPI_Type_create_hindexed(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_hvector(int count, int blocklength, MPI_Aint stride, MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_keyval(MPI_Type_copy_attr_function *type_copy_attr_fn, MPI_Type_delete_attr_function *type_delete_attr_fn, int *type_keyval, void *extra_state); int PMPI_Type_create_indexed_block(int count, int blocklength, int array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_struct(int count, int array_of_block_lengths[], MPI_Aint array_of_displacements[], MPI_Datatype array_of_types[], MPI_Datatype *newtype); int PMPI_Type_create_subarray(int ndims, int size_array[], int subsize_array[], int start_array[], int order, MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_resized(MPI_Datatype oldtype, MPI_Aint lb, MPI_Aint extent, MPI_Datatype *newtype); int PMPI_Type_delete_attr(MPI_Datatype type, int type_keyval); int PMPI_Type_dup(MPI_Datatype type, MPI_Datatype *newtype); int PMPI_Type_extent(MPI_Datatype type, MPI_Aint *extent) ; int PMPI_Type_free(MPI_Datatype *type); int PMPI_Type_free_keyval(int *type_keyval); MPI_Datatype PMPI_Type_f2c(int datatype); int PMPI_Type_get_attr(MPI_Datatype type, int type_keyval, void *attribute_val, int *flag); int PMPI_Type_get_contents(MPI_Datatype mtype, int max_integers, int max_addresses, int max_datatypes, int array_of_integers[], MPI_Aint array_of_addresses[], MPI_Datatype array_of_datatypes[]); int PMPI_Type_get_envelope(MPI_Datatype type, int *num_integers, int *num_addresses, int *num_datatypes, int *combiner); int PMPI_Type_get_extent(MPI_Datatype type, MPI_Aint *lb, MPI_Aint *extent); int PMPI_Type_get_name(MPI_Datatype type, char *type_name, int *resultlen); int PMPI_Type_get_true_extent(MPI_Datatype datatype, MPI_Aint *true_lb, MPI_Aint *true_extent); int PMPI_Type_hindexed(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype) ; int PMPI_Type_hvector(int count, int blocklength, MPI_Aint stride, MPI_Datatype oldtype, MPI_Datatype *newtype) ; int PMPI_Type_indexed(int count, int array_of_blocklengths[], int array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_lb(MPI_Datatype type, MPI_Aint *lb) ; int PMPI_Type_match_size(int typeclass, int size, MPI_Datatype *type); int PMPI_Type_set_attr(MPI_Datatype type, int type_keyval, void *attr_val); int PMPI_Type_set_name(MPI_Datatype type, char *type_name); int PMPI_Type_size(MPI_Datatype type, int *size); int PMPI_Type_struct(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype array_of_types[], MPI_Datatype *newtype) ; int PMPI_Type_ub(MPI_Datatype mtype, MPI_Aint *ub) ; int PMPI_Type_vector(int count, int blocklength, int stride, MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Unpack(void *inbuf, int insize, int *position, void *outbuf, int outcount, MPI_Datatype datatype, MPI_Comm comm); int PMPI_Unpublish_name(char *service_name, MPI_Info info, char *port_name); int PMPI_Unpack_external (char *datarep, void *inbuf, MPI_Aint insize, MPI_Aint *position, void *outbuf, int outcount, MPI_Datatype datatype); int PMPI_Waitall(int count, MPI_Request *array_of_requests, MPI_Status *array_of_statuses); int PMPI_Waitany(int count, MPI_Request *array_of_requests, int *index, MPI_Status *status); int PMPI_Wait(MPI_Request *request, MPI_Status *status); int PMPI_Waitsome(int incount, MPI_Request *array_of_requests, int *outcount, int *array_of_indices, MPI_Status *array_of_statuses); int PMPI_Win_c2f(MPI_Win win); int PMPI_Win_call_errhandler(MPI_Win win, int errorcode); int PMPI_Win_complete(MPI_Win win); int PMPI_Win_create(void *base, MPI_Aint size, int disp_unit, MPI_Info info, MPI_Comm comm, MPI_Win *win); int PMPI_Win_create_errhandler(MPI_Win_errhandler_function *function, MPI_Errhandler *errhandler); int PMPI_Win_create_keyval(MPI_Win_copy_attr_function *win_copy_attr_fn, MPI_Win_delete_attr_function *win_delete_attr_fn, int *win_keyval, void *extra_state); int PMPI_Win_delete_attr(MPI_Win win, int win_keyval); MPI_Win PMPI_Win_f2c(int win); int PMPI_Win_fence(int assert, MPI_Win win); int PMPI_Win_free(MPI_Win *win); int PMPI_Win_free_keyval(int *win_keyval); int PMPI_Win_get_attr(MPI_Win win, int win_keyval, void *attribute_val, int *flag); int PMPI_Win_get_errhandler(MPI_Win win, MPI_Errhandler *errhandler); int PMPI_Win_get_group(MPI_Win win, MPI_Group *group); int PMPI_Win_get_name(MPI_Win win, char *win_name, int *resultlen); int PMPI_Win_lock(int lock_type, int rank, int assert, MPI_Win win); int PMPI_Win_post(MPI_Group group, int assert, MPI_Win win); int PMPI_Win_set_attr(MPI_Win win, int win_keyval, void *attribute_val); int PMPI_Win_set_errhandler(MPI_Win win, MPI_Errhandler errhandler); int PMPI_Win_set_name(MPI_Win win, char *win_name); int PMPI_Win_start(MPI_Group group, int assert, MPI_Win win); int PMPI_Win_test(MPI_Win win, int *flag); int PMPI_Win_unlock(int rank, MPI_Win win); int PMPI_Win_wait(MPI_Win win); double PMPI_Wtick(void); double PMPI_Wtime(void); #line 2281 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c" int ompi_major = 1; int ompi_minor = 6; int ompi_release = 3; Defined "HAVE_OMPI_MAJOR_VERSION" to "1" Defined "HAVE_OMPI_MINOR_VERSION" to "6" Defined "HAVE_OMPI_RELEASE_VERSION" to "3" Checking for functions [MPI_Alltoallw] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Alltoallw(); static void _check_MPI_Alltoallw() { MPI_Alltoallw(); } int main() { _check_MPI_Alltoallw();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Checking for functions [MPI_Type_create_indexed_block] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Type_create_indexed_block(); static void _check_MPI_Type_create_indexed_block() { MPI_Type_create_indexed_block(); } int main() { _check_MPI_Type_create_indexed_block();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Defined "HAVE_MPI_ALLTOALLW" to "1" Checking for functions [MPI_Win_create] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Win_create(); static void _check_MPI_Win_create() { MPI_Win_create(); } int main() { _check_MPI_Win_create();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Defined "HAVE_MPI_WIN_CREATE" to "1" Defined "HAVE_MPI_REPLACE" to "1" Checking for functions [MPI_Comm_spawn MPI_Type_get_envelope MPI_Type_get_extent MPI_Type_dup MPI_Init_thread MPI_Iallreduce MPI_Ibarrier MPI_Finalized MPI_Exscan] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Comm_spawn(); static void _check_MPI_Comm_spawn() { MPI_Comm_spawn(); } char MPI_Type_get_envelope(); static void _check_MPI_Type_get_envelope() { MPI_Type_get_envelope(); } char MPI_Type_get_extent(); static void _check_MPI_Type_get_extent() { MPI_Type_get_extent(); } char MPI_Type_dup(); static void _check_MPI_Type_dup() { MPI_Type_dup(); } char MPI_Init_thread(); static void _check_MPI_Init_thread() { MPI_Init_thread(); } char MPI_Iallreduce(); static void _check_MPI_Iallreduce() { MPI_Iallreduce(); } char MPI_Ibarrier(); static void _check_MPI_Ibarrier() { MPI_Ibarrier(); } char MPI_Finalized(); static void _check_MPI_Finalized() { MPI_Finalized(); } char MPI_Exscan(); static void _check_MPI_Exscan() { MPI_Exscan(); } int main() { _check_MPI_Comm_spawn(); _check_MPI_Type_get_envelope(); _check_MPI_Type_get_extent(); _check_MPI_Type_dup(); _check_MPI_Init_thread(); _check_MPI_Iallreduce(); _check_MPI_Ibarrier(); _check_MPI_Finalized(); _check_MPI_Exscan();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Defined "HAVE_MPI_COMM_SPAWN" to "1" Defined "HAVE_MPI_TYPE_GET_ENVELOPE" to "1" Defined "HAVE_MPI_TYPE_GET_EXTENT" to "1" Defined "HAVE_MPI_TYPE_DUP" to "1" Defined "HAVE_MPI_INIT_THREAD" to "1" Defined "HAVE_MPI_IALLREDUCE" to "1" Defined "HAVE_MPI_IBARRIER" to "1" Defined "HAVE_MPI_FINALIZED" to "1" Defined "HAVE_MPI_EXSCAN" to "1" Checking for functions [MPIX_Iallreduce] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPIX_Iallreduce(); static void _check_MPIX_Iallreduce() { MPIX_Iallreduce(); } int main() { _check_MPIX_Iallreduce();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o: In function `_check_MPIX_Iallreduce': conftest.c:(.text+0x4): undefined reference to `MPIX_Iallreduce' Popping language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c", line 6: warning: variable "combiner" was declared but never referenced int combiner = MPI_COMBINER_DUP;; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { int combiner = MPI_COMBINER_DUP;; return 0; } Defined "HAVE_MPI_COMBINER_DUP" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c", line 6: warning: variable "combiner" was declared but never referenced int combiner = MPI_COMBINER_CONTIGUOUS;; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { int combiner = MPI_COMBINER_CONTIGUOUS;; return 0; } Defined "HAVE_MPI_COMBINER_CONTIGUOUS" to "1" Checking for functions [MPIDI_CH3I_sock_set] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPIDI_CH3I_sock_set(); static void _check_MPIDI_CH3I_sock_set() { MPIDI_CH3I_sock_set(); } int main() { _check_MPIDI_CH3I_sock_set();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o: In function `_check_MPIDI_CH3I_sock_set': conftest.c:(.text+0x4): undefined reference to `MPIDI_CH3I_sock_set' Popping language C Checking for functions [MPIDI_CH3I_sock_fixed_nbc_progress] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPIDI_CH3I_sock_fixed_nbc_progress(); static void _check_MPIDI_CH3I_sock_fixed_nbc_progress() { MPIDI_CH3I_sock_fixed_nbc_progress(); } int main() { _check_MPIDI_CH3I_sock_fixed_nbc_progress();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o: In function `_check_MPIDI_CH3I_sock_fixed_nbc_progress': conftest.c:(.text+0x4): undefined reference to `MPIDI_CH3I_sock_fixed_nbc_progress' Popping language C ================================================================================ TEST checkSharedLibrary from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:130) TESTING: checkSharedLibrary from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:130) Sets flag indicating if MPI libraries are shared or not and determines if MPI libraries CANNOT be used by shared libraries ================================================================================ TEST configureMPIEXEC from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:143) TESTING: configureMPIEXEC from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:143) Checking for mpiexec Checking for program /opt/FJSVtclang/check/mpiexec...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/mpiexec...found Defined make macro "MPIEXEC" to "mpiexec" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #ifdef __cplusplus extern "C" #endif int init(int argc, char *argv[]) { int isInitialized; MPI_Init(&argc, &argv); MPI_Initialized(&isInitialized); return (int) isInitialized; } Pushing language C Popping language C Executing: /usr/bin/ar cr /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/libconftest.a /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o ; /usr/bin/ranlib /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/libconftest.a Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #ifdef __cplusplus extern "C" #endif int checkInit(void) { int isInitialized; MPI_Initialized(&isInitialized); if (isInitialized) MPI_Finalize(); return (int) isInitialized; } Pushing language C Popping language C Executing: /usr/bin/ar cr /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/libconftest.a /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o ; /usr/bin/ranlib /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/libconftest.a Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #ifdef PETSC_HAVE_DLFCN_H #include #endif int main() { int argc = 1; char *argv[2] = {(char *) "conftest", NULL}; void *lib; int (*init)(int, char **); int (*checkInit)(void); lib = dlopen("/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/lib1.a", RTLD_LAZY); if (!lib) { fprintf(stderr, "Could not open lib1.so: %s\n", dlerror()); exit(1); } init = (int (*)(int, char **)) dlsym(lib, "init"); if (!init) { fprintf(stderr, "Could not find initialization function\n"); exit(1); } if (!(*init)(argc, argv)) { fprintf(stderr, "Could not initialize library\n"); exit(1); } lib = dlopen("/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/lib2.a", RTLD_LAZY); if (!lib) { fprintf(stderr, "Could not open lib2.so: %s\n", dlerror()); exit(1); } checkInit = (int (*)(void)) dlsym(lib, "checkInit"); if (!checkInit) { fprintf(stderr, "Could not find initialization check function\n"); exit(1); } if (!(*checkInit)()) { fprintf(stderr, "Did not link with shared library\n"); exit(2); } ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest to see if it can be run Executing: mpiexec /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest Executing: mpiexec /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest ERROR while running executable: Could not execute "mpiexec /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest": [ERR.] PLE 0015 plexec cannot execute as sequential job. Library was not shared Popping language C ================================================================================ TEST alternateConfigureLibrary from config.packages.tetgen(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.tetgen(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.yaml(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.yaml(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.ctetgen(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.ctetgen(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.sprng(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.sprng(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default Pushing language C ================================================================================ TEST configureLibrary from config.packages.ssl(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/ssl.py:23) TESTING: configureLibrary from config.packages.ssl(config/BuildSystem/config/packages/ssl.py:23) ================================================================================== Checking for a functional ssl Checking for library in Compiler specific search SSL: [] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [SSLv23_method] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char SSLv23_method(); static void _check_SSLv23_method() { SSLv23_method(); } int main() { _check_SSLv23_method();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o: In function `_check_SSLv23_method': conftest.c:(.text+0x4): undefined reference to `SSLv23_method' Popping language C Checking for library in Compiler specific search SSL: ['libssl.a', 'libcrypto.a'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [SSLv23_method] in library ['libssl.a', 'libcrypto.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char SSLv23_method(); static void _check_SSLv23_method() { SSLv23_method(); } int main() { _check_SSLv23_method();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -lssl -lcrypto -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_LIBSSL" to "1" Defined "HAVE_LIBCRYPTO" to "1" Popping language C Checking for headers Compiler specific search SSL: [] Pushing language C ================================================================================ TEST checkInclude from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['openssl/ssl.h'] in [] Checking include with compiler flags var CPPFLAGS [] Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 128 "/usr/include/openssl/e_os2.h" #line 137 "/usr/include/openssl/e_os2.h" #line 151 "/usr/include/openssl/e_os2.h" #line 165 "/usr/include/openssl/e_os2.h" #line 206 "/usr/include/openssl/e_os2.h" #line 229 "/usr/include/openssl/e_os2.h" #line 264 "/usr/include/openssl/e_os2.h" #line 288 "/usr/include/openssl/e_os2.h" #line 174 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/comp.h" #line 1 "/usr/include/openssl/crypto.h" #line 1 "/usr/include/stdlib.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/stdlib.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef int wchar_t; #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 34 "/usr/include/stdlib.h" #line 95 "/usr/include/stdlib.h" typedef struct { int quot; int rem; } div_t; typedef struct { long int quot; long int rem; } ldiv_t; typedef struct { long long int quot; long long int rem; } lldiv_t; extern size_t __ctype_get_mb_cur_max (void) ; extern double atof (const char *__nptr) ; extern int atoi (const char *__nptr) ; extern long int atol (const char *__nptr) ; extern long long int atoll (const char *__nptr) ; extern double strtod (const char * __nptr, char ** __endptr) ; extern float strtof (const char * __nptr, char ** __endptr) ; extern long double strtold (const char * __nptr, char ** __endptr) ; extern long int strtol (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long int strtoul (const char * __nptr, char ** __endptr, int __base) ; extern long long int strtoq (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long long int strtouq (const char * __nptr, char ** __endptr, int __base) ; extern long long int strtoll (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long long int strtoull (const char * __nptr, char ** __endptr, int __base) ; #line 274 "/usr/include/stdlib.h" #line 305 "/usr/include/stdlib.h" extern char *l64a (long int __n) ; extern long int a64l (const char *__s) ; #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; typedef char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 321 "/usr/include/stdlib.h" extern long int random (void) ; extern void srandom (unsigned int __seed) ; extern char *initstate (unsigned int __seed, char *__statebuf, size_t __statelen) ; extern char *setstate (char *__statebuf) ; struct random_data { int32_t *fptr; int32_t *rptr; int32_t *state; int rand_type; int rand_deg; int rand_sep; int32_t *end_ptr; }; extern int random_r (struct random_data * __buf, int32_t * __result) ; extern int srandom_r (unsigned int __seed, struct random_data *__buf) ; extern int initstate_r (unsigned int __seed, char * __statebuf, size_t __statelen, struct random_data * __buf) ; extern int setstate_r (char * __statebuf, struct random_data * __buf) ; extern int rand (void) ; extern void srand (unsigned int __seed) ; extern int rand_r (unsigned int *__seed) ; extern double drand48 (void) ; extern double erand48 (unsigned short int __xsubi[3]) ; extern long int lrand48 (void) ; extern long int nrand48 (unsigned short int __xsubi[3]) ; extern long int mrand48 (void) ; extern long int jrand48 (unsigned short int __xsubi[3]) ; extern void srand48 (long int __seedval) ; extern unsigned short int *seed48 (unsigned short int __seed16v[3]) ; extern void lcong48 (unsigned short int __param[7]) ; struct drand48_data { unsigned short int __x[3]; unsigned short int __old_x[3]; unsigned short int __c; unsigned short int __init; unsigned long long int __a; }; extern int drand48_r (struct drand48_data * __buffer, double * __result) ; extern int erand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, double * __result) ; extern int lrand48_r (struct drand48_data * __buffer, long int * __result) ; extern int nrand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, long int * __result) ; extern int mrand48_r (struct drand48_data * __buffer, long int * __result) ; extern int jrand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, long int * __result) ; extern int srand48_r (long int __seedval, struct drand48_data *__buffer) ; extern int seed48_r (unsigned short int __seed16v[3], struct drand48_data *__buffer) ; extern int lcong48_r (unsigned short int __param[7], struct drand48_data *__buffer) ; extern void *malloc (size_t __size) ; extern void *calloc (size_t __nmemb, size_t __size) ; extern void *realloc (void *__ptr, size_t __size) ; extern void free (void *__ptr) ; extern void cfree (void *__ptr) ; #line 1 "/usr/include/alloca.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/alloca.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 26 "/usr/include/alloca.h" extern void *alloca (size_t __size) ; #line 498 "/usr/include/stdlib.h" extern void *valloc (size_t __size) ; extern int posix_memalign (void **__memptr, size_t __alignment, size_t __size) ; extern void abort (void) ; extern int atexit (void (*__func) (void)) ; extern int on_exit (void (*__func) (int __status, void *__arg), void *__arg) ; extern void exit (int __status) ; extern void _Exit (int __status) ; extern char *getenv (const char *__name) ; extern char *__secure_getenv (const char *__name) ; extern int putenv (char *__string) ; extern int setenv (const char *__name, const char *__value, int __replace) ; extern int unsetenv (const char *__name) ; extern int clearenv (void) ; extern char *mktemp (char *__template) ; extern int mkstemp (char *__template) ; #line 607 "/usr/include/stdlib.h" extern char *mkdtemp (char *__template) ; #line 638 "/usr/include/stdlib.h" extern int system (const char *__command) ; #line 655 "/usr/include/stdlib.h" extern char *realpath (const char * __name, char * __resolved) ; typedef int (*__compar_fn_t) (const void *, const void *); extern void *bsearch (const void *__key, const void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; extern void qsort (void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; extern int abs (int __x) ; extern long int labs (long int __x) ; extern long long int llabs (long long int __x) ; extern div_t div (int __numer, int __denom) ; extern ldiv_t ldiv (long int __numer, long int __denom) ; extern lldiv_t lldiv (long long int __numer, long long int __denom) ; extern char *ecvt (double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *fcvt (double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *gcvt (double __value, int __ndigit, char *__buf) ; extern char *qecvt (long double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *qfcvt (long double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *qgcvt (long double __value, int __ndigit, char *__buf) ; extern int ecvt_r (double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int fcvt_r (double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int qecvt_r (long double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int qfcvt_r (long double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int mblen (const char *__s, size_t __n) ; extern int mbtowc (wchar_t * __pwc, const char * __s, size_t __n) ; extern int wctomb (char *__s, wchar_t __wchar) ; extern size_t mbstowcs (wchar_t * __pwcs, const char * __s, size_t __n) ; extern size_t wcstombs (char * __s, const wchar_t * __pwcs, size_t __n) ; extern int rpmatch (const char *__response) ; #line 820 "/usr/include/stdlib.h" extern int posix_openpt (int __oflag) ; #line 851 "/usr/include/stdlib.h" #line 862 "/usr/include/stdlib.h" extern int getloadavg (double __loadavg[], int __nelem) ; #line 879 "/usr/include/stdlib.h" #line 121 "/usr/include/openssl/crypto.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 123 "/usr/include/openssl/crypto.h" #line 1 "/usr/include/stdio.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 29 "/usr/include/stdio.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 35 "/usr/include/stdio.h" struct _IO_FILE; typedef struct _IO_FILE FILE; typedef struct _IO_FILE __FILE; #line 1 "/usr/include/libio.h" #line 1 "/usr/include/_G_config.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 16 "/usr/include/_G_config.h" #line 1 "/usr/include/wchar.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned int wint_t; #line 53 "/usr/include/wchar.h" #line 64 "/usr/include/wchar.h" #line 74 "/usr/include/wchar.h" typedef struct { int __count; union { wint_t __wch; char __wchb[4]; } __value; } __mbstate_t; #line 841 "/usr/include/wchar.h" #line 21 "/usr/include/_G_config.h" typedef struct { __off_t __pos; __mbstate_t __state; } _G_fpos_t; typedef struct { __off64_t __pos; __mbstate_t __state; } _G_fpos64_t; #line 52 "/usr/include/_G_config.h" typedef int _G_int16_t ; typedef int _G_int32_t ; typedef unsigned int _G_uint16_t ; typedef unsigned int _G_uint32_t ; #line 74 "/usr/include/_G_config.h" #line 33 "/usr/include/libio.h" #line 49 "/usr/include/libio.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stdarg.h" typedef void *va_list; #line 27 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stdarg.h" #line 38 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stdarg.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stdarg.h" #line 54 "/usr/include/libio.h" #line 73 "/usr/include/libio.h" #line 88 "/usr/include/libio.h" #line 104 "/usr/include/libio.h" #line 113 "/usr/include/libio.h" #line 139 "/usr/include/libio.h" #line 149 "/usr/include/libio.h" #line 168 "/usr/include/libio.h" struct _IO_jump_t; struct _IO_FILE; #line 180 "/usr/include/libio.h" typedef void _IO_lock_t; struct _IO_marker { struct _IO_marker *_next; struct _IO_FILE *_sbuf; int _pos; #line 203 "/usr/include/libio.h" }; enum __codecvt_result { __codecvt_ok, __codecvt_partial, __codecvt_error, __codecvt_noconv }; #line 270 "/usr/include/libio.h" struct _IO_FILE { int _flags; char* _IO_read_ptr; char* _IO_read_end; char* _IO_read_base; char* _IO_write_base; char* _IO_write_ptr; char* _IO_write_end; char* _IO_buf_base; char* _IO_buf_end; char *_IO_save_base; char *_IO_backup_base; char *_IO_save_end; struct _IO_marker *_markers; struct _IO_FILE *_chain; int _fileno; int _flags2; __off_t _old_offset; unsigned short _cur_column; signed char _vtable_offset; char _shortbuf[1]; _IO_lock_t *_lock; #line 319 "/usr/include/libio.h" __off64_t _offset; #line 328 "/usr/include/libio.h" void *__pad1; void *__pad2; void *__pad3; void *__pad4; size_t __pad5; int _mode; char _unused2[15 * sizeof (int) - 4 * sizeof (void *) - sizeof (size_t)]; }; typedef struct _IO_FILE _IO_FILE; struct _IO_FILE_plus; extern struct _IO_FILE_plus _IO_2_1_stdin_; extern struct _IO_FILE_plus _IO_2_1_stdout_; extern struct _IO_FILE_plus _IO_2_1_stderr_; #line 358 "/usr/include/libio.h" typedef __ssize_t __io_read_fn (void *__cookie, char *__buf, size_t __nbytes); typedef __ssize_t __io_write_fn (void *__cookie, const char *__buf, size_t __n); typedef int __io_seek_fn (void *__cookie, __off64_t *__pos, int __w); typedef int __io_close_fn (void *__cookie); #line 410 "/usr/include/libio.h" extern int __underflow (_IO_FILE *); extern int __uflow (_IO_FILE *); extern int __overflow (_IO_FILE *, int); #line 442 "/usr/include/libio.h" #line 454 "/usr/include/libio.h" extern int _IO_getc (_IO_FILE *__fp); extern int _IO_putc (int __c, _IO_FILE *__fp); extern int _IO_feof (_IO_FILE *__fp) ; extern int _IO_ferror (_IO_FILE *__fp) ; extern int _IO_peekc_locked (_IO_FILE *__fp); extern void _IO_flockfile (_IO_FILE *) ; extern void _IO_funlockfile (_IO_FILE *) ; extern int _IO_ftrylockfile (_IO_FILE *) ; #line 487 "/usr/include/libio.h" extern int _IO_vfscanf (_IO_FILE * , const char * , va_list, int *); extern int _IO_vfprintf (_IO_FILE *, const char *, va_list); extern __ssize_t _IO_padn (_IO_FILE *, int, __ssize_t); extern size_t _IO_sgetn (_IO_FILE *, void *, size_t); extern __off64_t _IO_seekoff (_IO_FILE *, __off64_t, int, int); extern __off64_t _IO_seekpos (_IO_FILE *, __off64_t, int); extern void _IO_free_backup_area (_IO_FILE *) ; #line 544 "/usr/include/libio.h" #line 76 "/usr/include/stdio.h" #line 87 "/usr/include/stdio.h" typedef _G_fpos_t fpos_t; #line 1 "/usr/include/bits/stdio_lim.h" #line 142 "/usr/include/stdio.h" extern struct _IO_FILE *stdin; extern struct _IO_FILE *stdout; extern struct _IO_FILE *stderr; extern int remove (const char *__filename) ; extern int rename (const char *__old, const char *__new) ; extern FILE *tmpfile (void) ; #line 182 "/usr/include/stdio.h" extern char *tmpnam (char *__s) ; extern char *tmpnam_r (char *__s) ; extern char *tempnam (const char *__dir, const char *__pfx) ; extern int fclose (FILE *__stream); extern int fflush (FILE *__stream); extern int fflush_unlocked (FILE *__stream); #line 243 "/usr/include/stdio.h" extern FILE *fopen (const char * __filename, const char * __modes) ; extern FILE *freopen (const char * __filename, const char * __modes, FILE * __stream) ; #line 274 "/usr/include/stdio.h" #line 282 "/usr/include/stdio.h" extern FILE *fdopen (int __fd, const char *__modes) ; #line 304 "/usr/include/stdio.h" extern void setbuf (FILE * __stream, char * __buf) ; extern int setvbuf (FILE * __stream, char * __buf, int __modes, size_t __n) ; extern void setbuffer (FILE * __stream, char * __buf, size_t __size) ; extern void setlinebuf (FILE *__stream) ; extern int fprintf (FILE * __stream, const char * __format, ...); extern int printf (const char * __format, ...); extern int sprintf (char * __s, const char * __format, ...) ; extern int vfprintf (FILE * __s, const char * __format, va_list __arg); extern int vprintf (const char * __format, va_list __arg); extern int vsprintf (char * __s, const char * __format, va_list __arg) ; extern int snprintf (char * __s, size_t __maxlen, const char * __format, ...) ; extern int vsnprintf (char * __s, size_t __maxlen, const char * __format, va_list __arg) ; #line 398 "/usr/include/stdio.h" extern int fscanf (FILE * __stream, const char * __format, ...) ; extern int scanf (const char * __format, ...) ; extern int sscanf (const char * __s, const char * __format, ...) ; #line 432 "/usr/include/stdio.h" extern int __isoc99_fscanf (FILE * __stream, const char * __format, ...) ; extern int __isoc99_scanf (const char * __format, ...) ; extern int __isoc99_sscanf (const char * __s, const char * __format, ...) ; extern int vfscanf (FILE * __s, const char * __format, va_list __arg) ; extern int vscanf (const char * __format, va_list __arg) ; extern int vsscanf (const char * __s, const char * __format, va_list __arg) ; #line 488 "/usr/include/stdio.h" extern int __isoc99_vfscanf (FILE * __s, const char * __format, va_list __arg) ; extern int __isoc99_vscanf (const char * __format, va_list __arg) ; extern int __isoc99_vsscanf (const char * __s, const char * __format, va_list __arg) ; extern int fgetc (FILE *__stream); extern int getc (FILE *__stream); extern int getchar (void); extern int getc_unlocked (FILE *__stream); extern int getchar_unlocked (void); extern int fgetc_unlocked (FILE *__stream); extern int fputc (int __c, FILE *__stream); extern int putc (int __c, FILE *__stream); extern int putchar (int __c); extern int fputc_unlocked (int __c, FILE *__stream); extern int putc_unlocked (int __c, FILE *__stream); extern int putchar_unlocked (int __c); extern int getw (FILE *__stream); extern int putw (int __w, FILE *__stream); extern char *fgets (char * __s, int __n, FILE * __stream) ; extern char *gets (char *__s) ; #line 623 "/usr/include/stdio.h" #line 653 "/usr/include/stdio.h" extern int fputs (const char * __s, FILE * __stream); extern int puts (const char *__s); extern int ungetc (int __c, FILE *__stream); extern size_t fread (void * __ptr, size_t __size, size_t __n, FILE * __stream) ; extern size_t fwrite (const void * __ptr, size_t __size, size_t __n, FILE * __s) ; #line 700 "/usr/include/stdio.h" extern size_t fread_unlocked (void * __ptr, size_t __size, size_t __n, FILE * __stream) ; extern size_t fwrite_unlocked (const void * __ptr, size_t __size, size_t __n, FILE * __stream) ; extern int fseek (FILE *__stream, long int __off, int __whence); extern long int ftell (FILE *__stream) ; extern void rewind (FILE *__stream); extern int fseeko (FILE *__stream, __off_t __off, int __whence); extern __off_t ftello (FILE *__stream) ; #line 762 "/usr/include/stdio.h" extern int fgetpos (FILE * __stream, fpos_t * __pos); extern int fsetpos (FILE *__stream, const fpos_t *__pos); #line 786 "/usr/include/stdio.h" #line 794 "/usr/include/stdio.h" extern void clearerr (FILE *__stream) ; extern int feof (FILE *__stream) ; extern int ferror (FILE *__stream) ; extern void clearerr_unlocked (FILE *__stream) ; extern int feof_unlocked (FILE *__stream) ; extern int ferror_unlocked (FILE *__stream) ; extern void perror (const char *__s); #line 1 "/usr/include/bits/sys_errlist.h" extern int sys_nerr; extern const char *const sys_errlist[]; #line 825 "/usr/include/stdio.h" extern int fileno (FILE *__stream) ; extern int fileno_unlocked (FILE *__stream) ; extern FILE *popen (const char *__command, const char *__modes) ; extern int pclose (FILE *__stream); extern char *ctermid (char *__s) ; #line 878 "/usr/include/stdio.h" extern void flockfile (FILE *__stream) ; extern int ftrylockfile (FILE *__stream) ; extern void funlockfile (FILE *__stream) ; #line 901 "/usr/include/stdio.h" #line 913 "/usr/include/stdio.h" #line 126 "/usr/include/openssl/crypto.h" #line 1 "/usr/include/openssl/stack.h" typedef struct stack_st { int num; char **data; int sorted; int num_alloc; int (*comp) (const char *const *, const char *const *); } STACK; int sk_num(const STACK *); char *sk_value(const STACK *, int); char *sk_set(STACK *, int, char *); STACK *sk_new(int (*cmp) (const char *const *, const char *const *)); STACK *sk_new_null(void); void sk_free(STACK *); void sk_pop_free(STACK * st, void (*func) (void *)); int sk_insert(STACK * sk, char *data, int where); char *sk_delete(STACK * st, int loc); char *sk_delete_ptr(STACK * st, char *p); int sk_find(STACK * st, char *data); int sk_find_ex(STACK * st, char *data); int sk_push(STACK * st, char *data); int sk_unshift(STACK * st, char *data); char *sk_shift(STACK * st); char *sk_pop(STACK * st); void sk_zero(STACK * st); int (*sk_set_cmp_func(STACK * sk, int (*c) (const char *const *, const char *const *))) (const char *const *, const char *const *); STACK *sk_dup(STACK * st); void sk_sort(STACK * st); int sk_is_sorted(const STACK * st); #line 129 "/usr/include/openssl/crypto.h" #line 1 "/usr/include/openssl/safestack.h" #line 158 "/usr/include/openssl/safestack.h" #line 207 "/usr/include/openssl/safestack.h" #line 247 "/usr/include/openssl/safestack.h" #line 269 "/usr/include/openssl/safestack.h" #line 291 "/usr/include/openssl/safestack.h" #line 313 "/usr/include/openssl/safestack.h" #line 335 "/usr/include/openssl/safestack.h" #line 357 "/usr/include/openssl/safestack.h" #line 379 "/usr/include/openssl/safestack.h" #line 401 "/usr/include/openssl/safestack.h" #line 423 "/usr/include/openssl/safestack.h" #line 445 "/usr/include/openssl/safestack.h" #line 467 "/usr/include/openssl/safestack.h" #line 489 "/usr/include/openssl/safestack.h" #line 511 "/usr/include/openssl/safestack.h" #line 533 "/usr/include/openssl/safestack.h" #line 555 "/usr/include/openssl/safestack.h" #line 577 "/usr/include/openssl/safestack.h" #line 599 "/usr/include/openssl/safestack.h" #line 621 "/usr/include/openssl/safestack.h" #line 643 "/usr/include/openssl/safestack.h" #line 665 "/usr/include/openssl/safestack.h" #line 687 "/usr/include/openssl/safestack.h" #line 709 "/usr/include/openssl/safestack.h" #line 731 "/usr/include/openssl/safestack.h" #line 753 "/usr/include/openssl/safestack.h" #line 775 "/usr/include/openssl/safestack.h" #line 797 "/usr/include/openssl/safestack.h" #line 819 "/usr/include/openssl/safestack.h" #line 841 "/usr/include/openssl/safestack.h" #line 863 "/usr/include/openssl/safestack.h" #line 885 "/usr/include/openssl/safestack.h" #line 907 "/usr/include/openssl/safestack.h" #line 929 "/usr/include/openssl/safestack.h" #line 951 "/usr/include/openssl/safestack.h" #line 973 "/usr/include/openssl/safestack.h" #line 995 "/usr/include/openssl/safestack.h" #line 1017 "/usr/include/openssl/safestack.h" #line 1039 "/usr/include/openssl/safestack.h" #line 1061 "/usr/include/openssl/safestack.h" #line 1083 "/usr/include/openssl/safestack.h" #line 1105 "/usr/include/openssl/safestack.h" #line 1127 "/usr/include/openssl/safestack.h" #line 1149 "/usr/include/openssl/safestack.h" #line 1171 "/usr/include/openssl/safestack.h" #line 1193 "/usr/include/openssl/safestack.h" #line 1215 "/usr/include/openssl/safestack.h" #line 1237 "/usr/include/openssl/safestack.h" #line 1259 "/usr/include/openssl/safestack.h" #line 1281 "/usr/include/openssl/safestack.h" #line 1303 "/usr/include/openssl/safestack.h" #line 1325 "/usr/include/openssl/safestack.h" #line 1347 "/usr/include/openssl/safestack.h" #line 1369 "/usr/include/openssl/safestack.h" #line 1391 "/usr/include/openssl/safestack.h" #line 1413 "/usr/include/openssl/safestack.h" #line 1435 "/usr/include/openssl/safestack.h" #line 1457 "/usr/include/openssl/safestack.h" #line 1479 "/usr/include/openssl/safestack.h" #line 1501 "/usr/include/openssl/safestack.h" #line 1523 "/usr/include/openssl/safestack.h" #line 1545 "/usr/include/openssl/safestack.h" #line 1567 "/usr/include/openssl/safestack.h" #line 1589 "/usr/include/openssl/safestack.h" #line 1611 "/usr/include/openssl/safestack.h" #line 1633 "/usr/include/openssl/safestack.h" #line 1655 "/usr/include/openssl/safestack.h" #line 1677 "/usr/include/openssl/safestack.h" #line 1699 "/usr/include/openssl/safestack.h" #line 1721 "/usr/include/openssl/safestack.h" #line 1743 "/usr/include/openssl/safestack.h" #line 1765 "/usr/include/openssl/safestack.h" #line 1787 "/usr/include/openssl/safestack.h" #line 1796 "/usr/include/openssl/safestack.h" #line 1805 "/usr/include/openssl/safestack.h" #line 1814 "/usr/include/openssl/safestack.h" #line 1823 "/usr/include/openssl/safestack.h" #line 1832 "/usr/include/openssl/safestack.h" #line 1841 "/usr/include/openssl/safestack.h" #line 1850 "/usr/include/openssl/safestack.h" #line 1859 "/usr/include/openssl/safestack.h" #line 1868 "/usr/include/openssl/safestack.h" #line 1877 "/usr/include/openssl/safestack.h" #line 1886 "/usr/include/openssl/safestack.h" #line 1895 "/usr/include/openssl/safestack.h" #line 1904 "/usr/include/openssl/safestack.h" #line 1913 "/usr/include/openssl/safestack.h" #line 1922 "/usr/include/openssl/safestack.h" #line 1931 "/usr/include/openssl/safestack.h" #line 1940 "/usr/include/openssl/safestack.h" #line 1949 "/usr/include/openssl/safestack.h" #line 1958 "/usr/include/openssl/safestack.h" #line 1967 "/usr/include/openssl/safestack.h" #line 1976 "/usr/include/openssl/safestack.h" #line 1985 "/usr/include/openssl/safestack.h" #line 130 "/usr/include/openssl/crypto.h" #line 1 "/usr/include/openssl/opensslv.h" #line 36 "/usr/include/openssl/opensslv.h" #line 131 "/usr/include/openssl/crypto.h" #line 1 "/usr/include/openssl/ossl_typ.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 59 "/usr/include/openssl/ossl_typ.h" #line 79 "/usr/include/openssl/ossl_typ.h" typedef struct asn1_string_st ASN1_INTEGER; typedef struct asn1_string_st ASN1_ENUMERATED; typedef struct asn1_string_st ASN1_BIT_STRING; typedef struct asn1_string_st ASN1_OCTET_STRING; typedef struct asn1_string_st ASN1_PRINTABLESTRING; typedef struct asn1_string_st ASN1_T61STRING; typedef struct asn1_string_st ASN1_IA5STRING; typedef struct asn1_string_st ASN1_GENERALSTRING; typedef struct asn1_string_st ASN1_UNIVERSALSTRING; typedef struct asn1_string_st ASN1_BMPSTRING; typedef struct asn1_string_st ASN1_UTCTIME; typedef struct asn1_string_st ASN1_TIME; typedef struct asn1_string_st ASN1_GENERALIZEDTIME; typedef struct asn1_string_st ASN1_VISIBLESTRING; typedef struct asn1_string_st ASN1_UTF8STRING; typedef int ASN1_BOOLEAN; typedef int ASN1_NULL; #line 106 "/usr/include/openssl/ossl_typ.h" typedef struct bignum_st BIGNUM; typedef struct bignum_ctx BN_CTX; typedef struct bn_blinding_st BN_BLINDING; typedef struct bn_mont_ctx_st BN_MONT_CTX; typedef struct bn_recp_ctx_st BN_RECP_CTX; typedef struct bn_gencb_st BN_GENCB; typedef struct buf_mem_st BUF_MEM; typedef struct evp_cipher_st EVP_CIPHER; typedef struct evp_cipher_ctx_st EVP_CIPHER_CTX; typedef struct env_md_st EVP_MD; typedef struct env_md_ctx_st EVP_MD_CTX; typedef struct evp_pkey_st EVP_PKEY; typedef struct dh_st DH; typedef struct dh_method DH_METHOD; typedef struct dsa_st DSA; typedef struct dsa_method DSA_METHOD; typedef struct rsa_st RSA; typedef struct rsa_meth_st RSA_METHOD; typedef struct rand_meth_st RAND_METHOD; typedef struct ecdh_method ECDH_METHOD; typedef struct ecdsa_method ECDSA_METHOD; typedef struct x509_st X509; typedef struct X509_algor_st X509_ALGOR; typedef struct X509_crl_st X509_CRL; typedef struct X509_name_st X509_NAME; typedef struct x509_store_st X509_STORE; typedef struct x509_store_ctx_st X509_STORE_CTX; typedef struct ssl_st SSL; typedef struct ssl_ctx_st SSL_CTX; typedef struct v3_ext_ctx X509V3_CTX; typedef struct conf_st CONF; typedef struct store_st STORE; typedef struct store_method_st STORE_METHOD; typedef struct ui_st UI; typedef struct ui_method_st UI_METHOD; typedef struct st_ERR_FNS ERR_FNS; typedef struct engine_st ENGINE; typedef struct X509_POLICY_NODE_st X509_POLICY_NODE; typedef struct X509_POLICY_LEVEL_st X509_POLICY_LEVEL; typedef struct X509_POLICY_TREE_st X509_POLICY_TREE; typedef struct X509_POLICY_CACHE_st X509_POLICY_CACHE; typedef struct crypto_ex_data_st CRYPTO_EX_DATA; typedef int CRYPTO_EX_new (void *parent, void *ptr, CRYPTO_EX_DATA *ad, int idx, long argl, void *argp); typedef void CRYPTO_EX_free (void *parent, void *ptr, CRYPTO_EX_DATA *ad, int idx, long argl, void *argp); typedef int CRYPTO_EX_dup (CRYPTO_EX_DATA *to, CRYPTO_EX_DATA *from, void *from_d, int idx, long argl, void *argp); typedef struct ocsp_req_ctx_st OCSP_REQ_CTX; typedef struct ocsp_response_st OCSP_RESPONSE; typedef struct ocsp_responder_id_st OCSP_RESPID; #line 132 "/usr/include/openssl/crypto.h" #line 1 "/usr/include/openssl/symhacks.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 59 "/usr/include/openssl/symhacks.h" #line 401 "/usr/include/openssl/symhacks.h" #line 434 "/usr/include/openssl/symhacks.h" #line 142 "/usr/include/openssl/crypto.h" #line 173 "/usr/include/openssl/crypto.h" typedef struct openssl_item_st { int code; void *value; size_t value_size; size_t *value_length; } OPENSSL_ITEM; #line 233 "/usr/include/openssl/crypto.h" #line 259 "/usr/include/openssl/crypto.h" typedef struct { int references; struct CRYPTO_dynlock_value *data; } CRYPTO_dynlock; typedef struct bio_st BIO_dummy; struct crypto_ex_data_st { STACK *sk; int dummy; }; typedef struct crypto_ex_data_func_st { long argl; void *argp; CRYPTO_EX_new *new_func; CRYPTO_EX_free *free_func; CRYPTO_EX_dup *dup_func; } CRYPTO_EX_DATA_FUNCS; #line 338 "/usr/include/openssl/crypto.h" void CRYPTO_malloc_debug_init(void); int CRYPTO_mem_ctrl(int mode); int CRYPTO_is_mem_check_on(void); #line 387 "/usr/include/openssl/crypto.h" const char *SSLeay_version(int type); unsigned long SSLeay(void); int OPENSSL_issetugid(void); typedef struct st_CRYPTO_EX_DATA_IMPL CRYPTO_EX_DATA_IMPL; const CRYPTO_EX_DATA_IMPL *CRYPTO_get_ex_data_implementation(void); int CRYPTO_set_ex_data_implementation(const CRYPTO_EX_DATA_IMPL *i); int CRYPTO_ex_data_new_class(void); int CRYPTO_get_ex_new_index(int class_index, long argl, void *argp, CRYPTO_EX_new *new_func, CRYPTO_EX_dup *dup_func, CRYPTO_EX_free *free_func); int CRYPTO_new_ex_data(int class_index, void *obj, CRYPTO_EX_DATA *ad); int CRYPTO_dup_ex_data(int class_index, CRYPTO_EX_DATA *to, CRYPTO_EX_DATA *from); void CRYPTO_free_ex_data(int class_index, void *obj, CRYPTO_EX_DATA *ad); int CRYPTO_set_ex_data(CRYPTO_EX_DATA *ad, int idx, void *val); void *CRYPTO_get_ex_data(const CRYPTO_EX_DATA *ad, int idx); void CRYPTO_cleanup_all_ex_data(void); int CRYPTO_get_new_lockid(char *name); int CRYPTO_num_locks(void); void CRYPTO_lock(int mode, int type, const char *file, int line); void CRYPTO_set_locking_callback(void (*func) (int mode, int type, const char *file, int line)); void (*CRYPTO_get_locking_callback(void)) (int mode, int type, const char *file, int line); void CRYPTO_set_add_lock_callback(int (*func) (int *num, int mount, int type, const char *file, int line)); int (*CRYPTO_get_add_lock_callback(void)) (int *num, int mount, int type, const char *file, int line); void CRYPTO_set_id_callback(unsigned long (*func) (void)); unsigned long (*CRYPTO_get_id_callback(void)) (void); unsigned long CRYPTO_thread_id(void); const char *CRYPTO_get_lock_name(int type); int CRYPTO_add_lock(int *pointer, int amount, int type, const char *file, int line); void int_CRYPTO_set_do_dynlock_callback(void (*do_dynlock_cb) (int mode, int type, const char *file, int line)); int CRYPTO_get_new_dynlockid(void); void CRYPTO_destroy_dynlockid(int i); struct CRYPTO_dynlock_value *CRYPTO_get_dynlock_value(int i); void CRYPTO_set_dynlock_create_callback(struct CRYPTO_dynlock_value *(*dyn_create_function) (const char *file, int line)); void CRYPTO_set_dynlock_lock_callback(void (*dyn_lock_function) (int mode, struct CRYPTO_dynlock_value *l, const char *file, int line)); void CRYPTO_set_dynlock_destroy_callback(void (*dyn_destroy_function) (struct CRYPTO_dynlock_value *l, const char *file, int line)); struct CRYPTO_dynlock_value *(*CRYPTO_get_dynlock_create_callback(void)) (const char *file, int line); void (*CRYPTO_get_dynlock_lock_callback(void)) (int mode, struct CRYPTO_dynlock_value *l, const char *file, int line); void (*CRYPTO_get_dynlock_destroy_callback(void)) (struct CRYPTO_dynlock_value *l, const char *file, int line); int CRYPTO_set_mem_functions(void *(*m) (size_t), void *(*r) (void *, size_t), void (*f) (void *)); int CRYPTO_set_locked_mem_functions(void *(*m) (size_t), void (*free_func) (void *)); int CRYPTO_set_mem_ex_functions(void *(*m) (size_t, const char *, int), void *(*r) (void *, size_t, const char *, int), void (*f) (void *)); int CRYPTO_set_locked_mem_ex_functions(void *(*m) (size_t, const char *, int), void (*free_func) (void *)); int CRYPTO_set_mem_debug_functions(void (*m) (void *, int, const char *, int, int), void (*r) (void *, void *, int, const char *, int, int), void (*f) (void *, int), void (*so) (long), long (*go) (void)); void CRYPTO_set_mem_info_functions(int (*push_info_fn) (const char *info, const char *file, int line), int (*pop_info_fn) (void), int (*remove_all_info_fn) (void)); void CRYPTO_get_mem_functions(void *(**m) (size_t), void *(**r) (void *, size_t), void (**f) (void *)); void CRYPTO_get_locked_mem_functions(void *(**m) (size_t), void (**f) (void *)); void CRYPTO_get_mem_ex_functions(void *(**m) (size_t, const char *, int), void *(**r) (void *, size_t, const char *, int), void (**f) (void *)); void CRYPTO_get_locked_mem_ex_functions(void *(**m) (size_t, const char *, int), void (**f) (void *)); void CRYPTO_get_mem_debug_functions(void (**m) (void *, int, const char *, int, int), void (**r) (void *, void *, int, const char *, int, int), void (**f) (void *, int), void (**so) (long), long (**go) (void)); void *CRYPTO_malloc_locked(int num, const char *file, int line); void CRYPTO_free_locked(void *); void *CRYPTO_malloc(int num, const char *file, int line); char *CRYPTO_strdup(const char *str, const char *file, int line); void CRYPTO_free(void *); void *CRYPTO_realloc(void *addr, int num, const char *file, int line); void *CRYPTO_realloc_clean(void *addr, int old_num, int num, const char *file, int line); void *CRYPTO_remalloc(void *addr, int num, const char *file, int line); void OPENSSL_cleanse(void *ptr, size_t len); void CRYPTO_set_mem_debug_options(long bits); long CRYPTO_get_mem_debug_options(void); int CRYPTO_push_info_(const char *info, const char *file, int line); int CRYPTO_pop_info(void); int CRYPTO_remove_all_info(void); void CRYPTO_dbg_malloc(void *addr, int num, const char *file, int line, int before_p); void CRYPTO_dbg_realloc(void *addr1, void *addr2, int num, const char *file, int line, int before_p); void CRYPTO_dbg_free(void *addr, int before_p); void CRYPTO_dbg_set_options(long bits); long CRYPTO_dbg_get_options(void); int CRYPTO_dbg_push_info(const char *info, const char *file, int line); int CRYPTO_dbg_pop_info(void); int CRYPTO_dbg_remove_all_info(void); void CRYPTO_mem_leaks_fp(FILE *); void CRYPTO_mem_leaks(struct bio_st *bio); typedef void *CRYPTO_MEM_LEAK_CB (unsigned long, const char *, int, int, void *); void CRYPTO_mem_leaks_cb(CRYPTO_MEM_LEAK_CB *cb); void OpenSSLDie(const char *file, int line, const char *assertion); unsigned long *OPENSSL_ia32cap_loc(void); int OPENSSL_isservice(void); #line 633 "/usr/include/openssl/crypto.h" void OPENSSL_init(void); int CRYPTO_memcmp(const void *a, const void *b, size_t len); void ERR_load_CRYPTO_strings(void); #line 673 "/usr/include/openssl/crypto.h" #line 6 "/usr/include/openssl/comp.h" typedef struct comp_ctx_st COMP_CTX; typedef struct comp_method_st { int type; const char *name; int (*init) (COMP_CTX *ctx); void (*finish) (COMP_CTX *ctx); int (*compress) (COMP_CTX *ctx, unsigned char *out, unsigned int olen, unsigned char *in, unsigned int ilen); int (*expand) (COMP_CTX *ctx, unsigned char *out, unsigned int olen, unsigned char *in, unsigned int ilen); long (*ctrl) (void); long (*callback_ctrl) (void); } COMP_METHOD; struct comp_ctx_st { COMP_METHOD *meth; unsigned long compress_in; unsigned long compress_out; unsigned long expand_in; unsigned long expand_out; CRYPTO_EX_DATA ex_data; }; COMP_CTX *COMP_CTX_new(COMP_METHOD *meth); void COMP_CTX_free(COMP_CTX *ctx); int COMP_compress_block(COMP_CTX *ctx, unsigned char *out, int olen, unsigned char *in, int ilen); int COMP_expand_block(COMP_CTX *ctx, unsigned char *out, int olen, unsigned char *in, int ilen); COMP_METHOD *COMP_rle(void); COMP_METHOD *COMP_zlib(void); void COMP_zlib_cleanup(void); void ERR_load_COMP_strings(void); #line 177 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/bio.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 63 "/usr/include/openssl/bio.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stdarg.h" #line 19 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stdarg.h" #line 27 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stdarg.h" #line 38 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stdarg.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stdarg.h" #line 68 "/usr/include/openssl/bio.h" #line 99 "/usr/include/openssl/bio.h" #line 127 "/usr/include/openssl/bio.h" #line 141 "/usr/include/openssl/bio.h" #line 155 "/usr/include/openssl/bio.h" #line 178 "/usr/include/openssl/bio.h" typedef struct bio_st BIO; void BIO_set_flags(BIO *b, int flags); int BIO_test_flags(const BIO *b, int flags); void BIO_clear_flags(BIO *b, int flags); #line 221 "/usr/include/openssl/bio.h" #line 258 "/usr/include/openssl/bio.h" long (*BIO_get_callback(const BIO *b)) (struct bio_st *, int, const char *, int, long, long); void BIO_set_callback(BIO *b, long (*callback) (struct bio_st *, int, const char *, int, long, long)); char *BIO_get_callback_arg(const BIO *b); void BIO_set_callback_arg(BIO *b, char *arg); const char *BIO_method_name(const BIO *b); int BIO_method_type(const BIO *b); typedef void bio_info_cb (struct bio_st *, int, const char *, int, long, long); typedef struct bio_method_st { int type; const char *name; int (*bwrite) (BIO *, const char *, int); int (*bread) (BIO *, char *, int); int (*bputs) (BIO *, const char *); int (*bgets) (BIO *, char *, int); long (*ctrl) (BIO *, int, long, void *); int (*create) (BIO *); int (*destroy) (BIO *); long (*callback_ctrl) (BIO *, int, bio_info_cb *); } BIO_METHOD; #line 309 "/usr/include/openssl/bio.h" struct bio_st { BIO_METHOD *method; long (*callback) (struct bio_st *, int, const char *, int, long, long); char *cb_arg; int init; int shutdown; int flags; int retry_reason; int num; void *ptr; struct bio_st *next_bio; struct bio_st *prev_bio; int references; unsigned long num_read; unsigned long num_write; CRYPTO_EX_DATA ex_data; }; typedef struct bio_f_buffer_ctx_struct { int ibuf_size; int obuf_size; char *ibuf; int ibuf_len; int ibuf_off; char *obuf; int obuf_len; int obuf_off; } BIO_F_BUFFER_CTX; #line 363 "/usr/include/openssl/bio.h" #line 404 "/usr/include/openssl/bio.h" #line 418 "/usr/include/openssl/bio.h" #line 431 "/usr/include/openssl/bio.h" #line 495 "/usr/include/openssl/bio.h" #line 511 "/usr/include/openssl/bio.h" #line 537 "/usr/include/openssl/bio.h" size_t BIO_ctrl_pending(BIO *b); size_t BIO_ctrl_wpending(BIO *b); size_t BIO_ctrl_get_write_guarantee(BIO *b); size_t BIO_ctrl_get_read_request(BIO *b); int BIO_ctrl_reset_read_request(BIO *b); #line 574 "/usr/include/openssl/bio.h" int BIO_set_ex_data(BIO *bio, int idx, void *data); void *BIO_get_ex_data(BIO *bio, int idx); int BIO_get_ex_new_index(long argl, void *argp, CRYPTO_EX_new *new_func, CRYPTO_EX_dup *dup_func, CRYPTO_EX_free *free_func); unsigned long BIO_number_read(BIO *bio); unsigned long BIO_number_written(BIO *bio); #line 594 "/usr/include/openssl/bio.h" BIO_METHOD *BIO_s_file(void); BIO *BIO_new_file(const char *filename, const char *mode); BIO *BIO_new_fp(FILE *stream, int close_flag); BIO *BIO_new(BIO_METHOD *type); int BIO_set(BIO *a, BIO_METHOD *type); int BIO_free(BIO *a); void BIO_vfree(BIO *a); int BIO_read(BIO *b, void *data, int len); int BIO_gets(BIO *bp, char *buf, int size); int BIO_write(BIO *b, const void *data, int len); int BIO_puts(BIO *bp, const char *buf); int BIO_indent(BIO *b, int indent, int max); long BIO_ctrl(BIO *bp, int cmd, long larg, void *parg); long BIO_callback_ctrl(BIO *b, int cmd, void (*fp) (struct bio_st *, int, const char *, int, long, long)); char *BIO_ptr_ctrl(BIO *bp, int cmd, long larg); long BIO_int_ctrl(BIO *bp, int cmd, long larg, int iarg); BIO *BIO_push(BIO *b, BIO *append); BIO *BIO_pop(BIO *b); void BIO_free_all(BIO *a); BIO *BIO_find_type(BIO *b, int bio_type); BIO *BIO_next(BIO *b); BIO *BIO_get_retry_BIO(BIO *bio, int *reason); int BIO_get_retry_reason(BIO *bio); BIO *BIO_dup_chain(BIO *in); int BIO_nread0(BIO *bio, char **buf); int BIO_nread(BIO *bio, char **buf, int num); int BIO_nwrite0(BIO *bio, char **buf); int BIO_nwrite(BIO *bio, char **buf, int num); long BIO_debug_callback(BIO *bio, int cmd, const char *argp, int argi, long argl, long ret); BIO_METHOD *BIO_s_mem(void); BIO *BIO_new_mem_buf(void *buf, int len); BIO_METHOD *BIO_s_socket(void); BIO_METHOD *BIO_s_connect(void); BIO_METHOD *BIO_s_accept(void); BIO_METHOD *BIO_s_fd(void); BIO_METHOD *BIO_s_log(void); BIO_METHOD *BIO_s_bio(void); BIO_METHOD *BIO_s_null(void); BIO_METHOD *BIO_f_null(void); BIO_METHOD *BIO_f_buffer(void); BIO_METHOD *BIO_f_nbio_test(void); BIO_METHOD *BIO_s_datagram(void); int BIO_sock_should_retry(int i); int BIO_sock_non_fatal_error(int error); int BIO_dgram_non_fatal_error(int error); int BIO_fd_should_retry(int i); int BIO_fd_non_fatal_error(int error); int BIO_dump_cb(int (*cb) (const void *data, size_t len, void *u), void *u, const char *s, int len); int BIO_dump_indent_cb(int (*cb) (const void *data, size_t len, void *u), void *u, const char *s, int len, int indent); int BIO_dump(BIO *b, const char *bytes, int len); int BIO_dump_indent(BIO *b, const char *bytes, int len, int indent); int BIO_dump_fp(FILE *fp, const char *s, int len); int BIO_dump_indent_fp(FILE *fp, const char *s, int len, int indent); struct hostent *BIO_gethostbyname(const char *name); int BIO_sock_error(int sock); int BIO_socket_ioctl(int fd, long type, void *arg); int BIO_socket_nbio(int fd, int mode); int BIO_get_port(const char *str, unsigned short *port_ptr); int BIO_get_host_ip(const char *str, unsigned char *ip); int BIO_get_accept_socket(char *host_port, int mode); int BIO_accept(int sock, char **ip_port); int BIO_sock_init(void); void BIO_sock_cleanup(void); int BIO_set_tcp_ndelay(int sock, int turn_on); BIO *BIO_new_socket(int sock, int close_flag); BIO *BIO_new_dgram(int fd, int close_flag); BIO *BIO_new_fd(int fd, int close_flag); BIO *BIO_new_connect(char *host_port); BIO *BIO_new_accept(char *host_port); int BIO_new_bio_pair(BIO **bio1, size_t writebuf1, BIO **bio2, size_t writebuf2); void BIO_copy_next_retry(BIO *b); int BIO_printf(BIO *bio, const char *format, ...) ; int BIO_vprintf(BIO *bio, const char *format, va_list args) ; int BIO_snprintf(char *buf, size_t n, const char *format, ...) ; int BIO_vsnprintf(char *buf, size_t n, const char *format, va_list args) ; void ERR_load_BIO_strings(void); #line 776 "/usr/include/openssl/bio.h" #line 807 "/usr/include/openssl/bio.h" #line 180 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/x509.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 68 "/usr/include/openssl/x509.h" #line 1 "/usr/include/openssl/symhacks.h" #line 436 "/usr/include/openssl/symhacks.h" #line 69 "/usr/include/openssl/x509.h" #line 1 "/usr/include/openssl/buffer.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef long ptrdiff_t; #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 69 "/usr/include/openssl/buffer.h" struct buf_mem_st { int length; char *data; int max; }; BUF_MEM *BUF_MEM_new(void); void BUF_MEM_free(BUF_MEM *a); int BUF_MEM_grow(BUF_MEM *str, int len); int BUF_MEM_grow_clean(BUF_MEM *str, int len); char *BUF_strdup(const char *str); char *BUF_strndup(const char *str, size_t siz); void *BUF_memdup(const void *data, size_t siz); size_t BUF_strlcpy(char *dst, const char *src, size_t siz); size_t BUF_strlcat(char *dst, const char *src, size_t siz); void ERR_load_BUF_strings(void); #line 111 "/usr/include/openssl/buffer.h" #line 71 "/usr/include/openssl/x509.h" #line 1 "/usr/include/openssl/evp.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 67 "/usr/include/openssl/evp.h" #line 1 "/usr/include/openssl/symhacks.h" #line 436 "/usr/include/openssl/symhacks.h" #line 73 "/usr/include/openssl/evp.h" #line 1 "/usr/include/openssl/objects.h" #line 1 "/usr/include/openssl/obj_mac.h" #line 66 "/usr/include/openssl/objects.h" #line 963 "/usr/include/openssl/objects.h" #line 1 "/usr/include/openssl/asn1.h" #line 1 "/usr/include/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 30 "/usr/include/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 40 "/usr/include/time.h" #line 1 "/usr/include/bits/time.h" #line 43 "/usr/include/bits/time.h" #line 44 "/usr/include/time.h" typedef __clock_t clock_t; #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" #line 129 "/usr/include/time.h" struct tm { int tm_sec; int tm_min; int tm_hour; int tm_mday; int tm_mon; int tm_year; int tm_wday; int tm_yday; int tm_isdst; long int tm_gmtoff; const char *tm_zone; }; struct itimerspec { struct timespec it_interval; struct timespec it_value; }; struct sigevent; #line 179 "/usr/include/time.h" extern clock_t clock (void) ; extern time_t time (time_t *__timer) ; extern double difftime (time_t __time1, time_t __time0) ; extern time_t mktime (struct tm *__tp) ; extern size_t strftime (char * __s, size_t __maxsize, const char * __format, const struct tm * __tp) ; #line 212 "/usr/include/time.h" #line 227 "/usr/include/time.h" extern struct tm *gmtime (const time_t *__timer) ; extern struct tm *localtime (const time_t *__timer) ; extern struct tm *gmtime_r (const time_t * __timer, struct tm * __tp) ; extern struct tm *localtime_r (const time_t * __timer, struct tm * __tp) ; extern char *asctime (const struct tm *__tp) ; extern char *ctime (const time_t *__timer) ; extern char *asctime_r (const struct tm * __tp, char * __buf) ; extern char *ctime_r (const time_t * __timer, char * __buf) ; extern char *__tzname[2]; extern int __daylight; extern long int __timezone; extern char *tzname[2]; extern void tzset (void) ; extern int daylight; extern long int timezone; extern int stime (const time_t *__when) ; extern time_t timegm (struct tm *__tp) ; extern time_t timelocal (struct tm *__tp) ; extern int dysize (int __year) ; extern int nanosleep (const struct timespec *__requested_time, struct timespec *__remaining); extern int clock_getres (clockid_t __clock_id, struct timespec *__res) ; extern int clock_gettime (clockid_t __clock_id, struct timespec *__tp) ; extern int clock_settime (clockid_t __clock_id, const struct timespec *__tp) ; extern int clock_nanosleep (clockid_t __clock_id, int __flags, const struct timespec *__req, struct timespec *__rem); extern int clock_getcpuclockid (pid_t __pid, clockid_t *__clock_id) ; extern int timer_create (clockid_t __clock_id, struct sigevent * __evp, timer_t * __timerid) ; extern int timer_delete (timer_t __timerid) ; extern int timer_settime (timer_t __timerid, int __flags, const struct itimerspec * __value, struct itimerspec * __ovalue) ; extern int timer_gettime (timer_t __timerid, struct itimerspec *__value) ; extern int timer_getoverrun (timer_t __timerid) ; #line 400 "/usr/include/time.h" #line 415 "/usr/include/time.h" #line 63 "/usr/include/openssl/asn1.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 64 "/usr/include/openssl/asn1.h" #line 1 "/usr/include/openssl/symhacks.h" #line 436 "/usr/include/openssl/symhacks.h" #line 71 "/usr/include/openssl/asn1.h" #line 1 "/usr/include/openssl/bn.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 76 "/usr/include/openssl/bn.h" #line 119 "/usr/include/openssl/bn.h" #line 143 "/usr/include/openssl/bn.h" #line 169 "/usr/include/openssl/bn.h" #line 200 "/usr/include/openssl/bn.h" #line 223 "/usr/include/openssl/bn.h" #line 246 "/usr/include/openssl/bn.h" #line 268 "/usr/include/openssl/bn.h" #line 288 "/usr/include/openssl/bn.h" #line 299 "/usr/include/openssl/bn.h" struct bignum_st { unsigned long *d; int top; int dmax; int neg; int flags; }; struct bn_mont_ctx_st { int ri; BIGNUM RR; BIGNUM N; BIGNUM Ni; unsigned long n0; int flags; }; struct bn_recp_ctx_st { BIGNUM N; BIGNUM Nr; int num_bits; int shift; int flags; }; struct bn_gencb_st { unsigned int ver; void *arg; union { void (*cb_1) (int, int, void *); int (*cb_2) (int, int, BN_GENCB *); } cb; }; int BN_GENCB_call(BN_GENCB *cb, int a, int b); #line 387 "/usr/include/openssl/bn.h" #line 397 "/usr/include/openssl/bn.h" #line 410 "/usr/include/openssl/bn.h" const BIGNUM *BN_value_one(void); char *BN_options(void); BN_CTX *BN_CTX_new(void); void BN_CTX_init(BN_CTX *c); void BN_CTX_free(BN_CTX *c); void BN_CTX_start(BN_CTX *ctx); BIGNUM *BN_CTX_get(BN_CTX *ctx); void BN_CTX_end(BN_CTX *ctx); int BN_rand(BIGNUM *rnd, int bits, int top, int bottom); int BN_pseudo_rand(BIGNUM *rnd, int bits, int top, int bottom); int BN_rand_range(BIGNUM *rnd, const BIGNUM *range); int BN_pseudo_rand_range(BIGNUM *rnd, const BIGNUM *range); int BN_num_bits(const BIGNUM *a); int BN_num_bits_word(unsigned long); BIGNUM *BN_new(void); void BN_init(BIGNUM *); void BN_clear_free(BIGNUM *a); BIGNUM *BN_copy(BIGNUM *a, const BIGNUM *b); void BN_swap(BIGNUM *a, BIGNUM *b); BIGNUM *BN_bin2bn(const unsigned char *s, int len, BIGNUM *ret); int BN_bn2bin(const BIGNUM *a, unsigned char *to); BIGNUM *BN_mpi2bn(const unsigned char *s, int len, BIGNUM *ret); int BN_bn2mpi(const BIGNUM *a, unsigned char *to); int BN_sub(BIGNUM *r, const BIGNUM *a, const BIGNUM *b); int BN_usub(BIGNUM *r, const BIGNUM *a, const BIGNUM *b); int BN_uadd(BIGNUM *r, const BIGNUM *a, const BIGNUM *b); int BN_add(BIGNUM *r, const BIGNUM *a, const BIGNUM *b); int BN_mul(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, BN_CTX *ctx); int BN_sqr(BIGNUM *r, const BIGNUM *a, BN_CTX *ctx); void BN_set_negative(BIGNUM *b, int n); int BN_div(BIGNUM *dv, BIGNUM *rem, const BIGNUM *m, const BIGNUM *d, BN_CTX *ctx); int BN_nnmod(BIGNUM *r, const BIGNUM *m, const BIGNUM *d, BN_CTX *ctx); int BN_mod_add(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, const BIGNUM *m, BN_CTX *ctx); int BN_mod_add_quick(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, const BIGNUM *m); int BN_mod_sub(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, const BIGNUM *m, BN_CTX *ctx); int BN_mod_sub_quick(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, const BIGNUM *m); int BN_mod_mul(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, const BIGNUM *m, BN_CTX *ctx); int BN_mod_sqr(BIGNUM *r, const BIGNUM *a, const BIGNUM *m, BN_CTX *ctx); int BN_mod_lshift1(BIGNUM *r, const BIGNUM *a, const BIGNUM *m, BN_CTX *ctx); int BN_mod_lshift1_quick(BIGNUM *r, const BIGNUM *a, const BIGNUM *m); int BN_mod_lshift(BIGNUM *r, const BIGNUM *a, int n, const BIGNUM *m, BN_CTX *ctx); int BN_mod_lshift_quick(BIGNUM *r, const BIGNUM *a, int n, const BIGNUM *m); unsigned long BN_mod_word(const BIGNUM *a, unsigned long w); unsigned long BN_div_word(BIGNUM *a, unsigned long w); int BN_mul_word(BIGNUM *a, unsigned long w); int BN_add_word(BIGNUM *a, unsigned long w); int BN_sub_word(BIGNUM *a, unsigned long w); int BN_set_word(BIGNUM *a, unsigned long w); unsigned long BN_get_word(const BIGNUM *a); int BN_cmp(const BIGNUM *a, const BIGNUM *b); void BN_free(BIGNUM *a); int BN_is_bit_set(const BIGNUM *a, int n); int BN_lshift(BIGNUM *r, const BIGNUM *a, int n); int BN_lshift1(BIGNUM *r, const BIGNUM *a); int BN_exp(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, BN_CTX *ctx); int BN_mod_exp(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, const BIGNUM *m, BN_CTX *ctx); int BN_mod_exp_mont(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, const BIGNUM *m, BN_CTX *ctx, BN_MONT_CTX *m_ctx); int BN_mod_exp_mont_consttime(BIGNUM *rr, const BIGNUM *a, const BIGNUM *p, const BIGNUM *m, BN_CTX *ctx, BN_MONT_CTX *in_mont); int BN_mod_exp_mont_word(BIGNUM *r, unsigned long a, const BIGNUM *p, const BIGNUM *m, BN_CTX *ctx, BN_MONT_CTX *m_ctx); int BN_mod_exp2_mont(BIGNUM *r, const BIGNUM *a1, const BIGNUM *p1, const BIGNUM *a2, const BIGNUM *p2, const BIGNUM *m, BN_CTX *ctx, BN_MONT_CTX *m_ctx); int BN_mod_exp_simple(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, const BIGNUM *m, BN_CTX *ctx); int BN_mask_bits(BIGNUM *a, int n); int BN_print_fp(FILE *fp, const BIGNUM *a); int BN_print(BIO *fp, const BIGNUM *a); int BN_reciprocal(BIGNUM *r, const BIGNUM *m, int len, BN_CTX *ctx); int BN_rshift(BIGNUM *r, const BIGNUM *a, int n); int BN_rshift1(BIGNUM *r, const BIGNUM *a); void BN_clear(BIGNUM *a); BIGNUM *BN_dup(const BIGNUM *a); int BN_ucmp(const BIGNUM *a, const BIGNUM *b); int BN_set_bit(BIGNUM *a, int n); int BN_clear_bit(BIGNUM *a, int n); char *BN_bn2hex(const BIGNUM *a); char *BN_bn2dec(const BIGNUM *a); int BN_hex2bn(BIGNUM **a, const char *str); int BN_dec2bn(BIGNUM **a, const char *str); int BN_gcd(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, BN_CTX *ctx); int BN_kronecker(const BIGNUM *a, const BIGNUM *b, BN_CTX *ctx); BIGNUM *BN_mod_inverse(BIGNUM *ret, const BIGNUM *a, const BIGNUM *n, BN_CTX *ctx); BIGNUM *BN_mod_sqrt(BIGNUM *ret, const BIGNUM *a, const BIGNUM *n, BN_CTX *ctx); void BN_consttime_swap(unsigned long swap, BIGNUM *a, BIGNUM *b, int nwords); BIGNUM *BN_generate_prime(BIGNUM *ret, int bits, int safe, const BIGNUM *add, const BIGNUM *rem, void (*callback) (int, int, void *), void *cb_arg); int BN_is_prime(const BIGNUM *p, int nchecks, void (*callback) (int, int, void *), BN_CTX *ctx, void *cb_arg); int BN_is_prime_fasttest(const BIGNUM *p, int nchecks, void (*callback) (int, int, void *), BN_CTX *ctx, void *cb_arg, int do_trial_division); int BN_generate_prime_ex(BIGNUM *ret, int bits, int safe, const BIGNUM *add, const BIGNUM *rem, BN_GENCB *cb); int BN_is_prime_ex(const BIGNUM *p, int nchecks, BN_CTX *ctx, BN_GENCB *cb); int BN_is_prime_fasttest_ex(const BIGNUM *p, int nchecks, BN_CTX *ctx, int do_trial_division, BN_GENCB *cb); int BN_X931_generate_Xpq(BIGNUM *Xp, BIGNUM *Xq, int nbits, BN_CTX *ctx); int BN_X931_derive_prime_ex(BIGNUM *p, BIGNUM *p1, BIGNUM *p2, const BIGNUM *Xp, const BIGNUM *Xp1, const BIGNUM *Xp2, const BIGNUM *e, BN_CTX *ctx, BN_GENCB *cb); int BN_X931_generate_prime_ex(BIGNUM *p, BIGNUM *p1, BIGNUM *p2, BIGNUM *Xp1, BIGNUM *Xp2, const BIGNUM *Xp, const BIGNUM *e, BN_CTX *ctx, BN_GENCB *cb); BN_MONT_CTX *BN_MONT_CTX_new(void); void BN_MONT_CTX_init(BN_MONT_CTX *ctx); int BN_mod_mul_montgomery(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, BN_MONT_CTX *mont, BN_CTX *ctx); int BN_from_montgomery(BIGNUM *r, const BIGNUM *a, BN_MONT_CTX *mont, BN_CTX *ctx); void BN_MONT_CTX_free(BN_MONT_CTX *mont); int BN_MONT_CTX_set(BN_MONT_CTX *mont, const BIGNUM *mod, BN_CTX *ctx); BN_MONT_CTX *BN_MONT_CTX_copy(BN_MONT_CTX *to, BN_MONT_CTX *from); BN_MONT_CTX *BN_MONT_CTX_set_locked(BN_MONT_CTX **pmont, int lock, const BIGNUM *mod, BN_CTX *ctx); BN_BLINDING *BN_BLINDING_new(const BIGNUM *A, const BIGNUM *Ai, BIGNUM *mod); void BN_BLINDING_free(BN_BLINDING *b); int BN_BLINDING_update(BN_BLINDING *b, BN_CTX *ctx); int BN_BLINDING_convert(BIGNUM *n, BN_BLINDING *b, BN_CTX *ctx); int BN_BLINDING_invert(BIGNUM *n, BN_BLINDING *b, BN_CTX *ctx); int BN_BLINDING_convert_ex(BIGNUM *n, BIGNUM *r, BN_BLINDING *b, BN_CTX *); int BN_BLINDING_invert_ex(BIGNUM *n, const BIGNUM *r, BN_BLINDING *b, BN_CTX *); unsigned long BN_BLINDING_get_thread_id(const BN_BLINDING *); void BN_BLINDING_set_thread_id(BN_BLINDING *, unsigned long); unsigned long BN_BLINDING_get_flags(const BN_BLINDING *); void BN_BLINDING_set_flags(BN_BLINDING *, unsigned long); BN_BLINDING *BN_BLINDING_create_param(BN_BLINDING *b, const BIGNUM *e, BIGNUM *m, BN_CTX *ctx, int (*bn_mod_exp) (BIGNUM *r, const BIGNUM *a, const BIGNUM *p, const BIGNUM *m, BN_CTX *ctx, BN_MONT_CTX *m_ctx), BN_MONT_CTX *m_ctx); void BN_set_params(int mul, int high, int low, int mont); int BN_get_params(int which); void BN_RECP_CTX_init(BN_RECP_CTX *recp); BN_RECP_CTX *BN_RECP_CTX_new(void); void BN_RECP_CTX_free(BN_RECP_CTX *recp); int BN_RECP_CTX_set(BN_RECP_CTX *recp, const BIGNUM *rdiv, BN_CTX *ctx); int BN_mod_mul_reciprocal(BIGNUM *r, const BIGNUM *x, const BIGNUM *y, BN_RECP_CTX *recp, BN_CTX *ctx); int BN_mod_exp_recp(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, const BIGNUM *m, BN_CTX *ctx); int BN_div_recp(BIGNUM *dv, BIGNUM *rem, const BIGNUM *m, BN_RECP_CTX *recp, BN_CTX *ctx); int BN_GF2m_add(BIGNUM *r, const BIGNUM *a, const BIGNUM *b); int BN_GF2m_mod(BIGNUM *r, const BIGNUM *a, const BIGNUM *p); int BN_GF2m_mod_mul(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, const BIGNUM *p, BN_CTX *ctx); int BN_GF2m_mod_sqr(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, BN_CTX *ctx); int BN_GF2m_mod_inv(BIGNUM *r, const BIGNUM *b, const BIGNUM *p, BN_CTX *ctx); int BN_GF2m_mod_div(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, const BIGNUM *p, BN_CTX *ctx); int BN_GF2m_mod_exp(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, const BIGNUM *p, BN_CTX *ctx); int BN_GF2m_mod_sqrt(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, BN_CTX *ctx); int BN_GF2m_mod_solve_quad(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, BN_CTX *ctx); int BN_GF2m_mod_arr(BIGNUM *r, const BIGNUM *a, const unsigned int p[]); int BN_GF2m_mod_mul_arr(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, const unsigned int p[], BN_CTX *ctx); int BN_GF2m_mod_sqr_arr(BIGNUM *r, const BIGNUM *a, const unsigned int p[], BN_CTX *ctx); int BN_GF2m_mod_inv_arr(BIGNUM *r, const BIGNUM *b, const unsigned int p[], BN_CTX *ctx); int BN_GF2m_mod_div_arr(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, const unsigned int p[], BN_CTX *ctx); int BN_GF2m_mod_exp_arr(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, const unsigned int p[], BN_CTX *ctx); int BN_GF2m_mod_sqrt_arr(BIGNUM *r, const BIGNUM *a, const unsigned int p[], BN_CTX *ctx); int BN_GF2m_mod_solve_quad_arr(BIGNUM *r, const BIGNUM *a, const unsigned int p[], BN_CTX *ctx); int BN_GF2m_poly2arr(const BIGNUM *a, unsigned int p[], int max); int BN_GF2m_arr2poly(const unsigned int p[], BIGNUM *a); int BN_nist_mod_192(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, BN_CTX *ctx); int BN_nist_mod_224(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, BN_CTX *ctx); int BN_nist_mod_256(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, BN_CTX *ctx); int BN_nist_mod_384(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, BN_CTX *ctx); int BN_nist_mod_521(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, BN_CTX *ctx); const BIGNUM *BN_get0_nist_prime_192(void); const BIGNUM *BN_get0_nist_prime_224(void); const BIGNUM *BN_get0_nist_prime_256(void); const BIGNUM *BN_get0_nist_prime_384(void); const BIGNUM *BN_get0_nist_prime_521(void); BIGNUM *bn_expand2(BIGNUM *a, int words); BIGNUM *bn_dup_expand(const BIGNUM *a, int words); #line 796 "/usr/include/openssl/bn.h" #line 815 "/usr/include/openssl/bn.h" unsigned long bn_mul_add_words(unsigned long *rp, const unsigned long *ap, int num, unsigned long w); unsigned long bn_mul_words(unsigned long *rp, const unsigned long *ap, int num, unsigned long w); void bn_sqr_words(unsigned long *rp, const unsigned long *ap, int num); unsigned long bn_div_words(unsigned long h, unsigned long l, unsigned long d); unsigned long bn_add_words(unsigned long *rp, const unsigned long *ap, const unsigned long *bp, int num); unsigned long bn_sub_words(unsigned long *rp, const unsigned long *ap, const unsigned long *bp, int num); BIGNUM *get_rfc2409_prime_768(BIGNUM *bn); BIGNUM *get_rfc2409_prime_1024(BIGNUM *bn); BIGNUM *get_rfc3526_prime_1536(BIGNUM *bn); BIGNUM *get_rfc3526_prime_2048(BIGNUM *bn); BIGNUM *get_rfc3526_prime_3072(BIGNUM *bn); BIGNUM *get_rfc3526_prime_4096(BIGNUM *bn); BIGNUM *get_rfc3526_prime_6144(BIGNUM *bn); BIGNUM *get_rfc3526_prime_8192(BIGNUM *bn); int BN_bntest_rand(BIGNUM *rnd, int bits, int top, int bottom); void ERR_load_BN_strings(void); #line 892 "/usr/include/openssl/bn.h" #line 913 "/usr/include/openssl/bn.h" #line 75 "/usr/include/openssl/asn1.h" #line 132 "/usr/include/openssl/asn1.h" #line 152 "/usr/include/openssl/asn1.h" #line 161 "/usr/include/openssl/asn1.h" struct X509_algor_st; typedef struct asn1_ctx_st { unsigned char *p; int eos; int error; int inf; int tag; int xclass; long slen; unsigned char *max; unsigned char *q; unsigned char **pp; int line; } ASN1_CTX; typedef struct asn1_const_ctx_st { const unsigned char *p; int eos; int error; int inf; int tag; int xclass; long slen; const unsigned char *max; const unsigned char *q; const unsigned char **pp; int line; } ASN1_const_CTX; typedef struct asn1_object_st { const char *sn, *ln; int nid; int length; unsigned char *data; int flags; } ASN1_OBJECT; typedef struct asn1_string_st { int length; int type; unsigned char *data; long flags; } ASN1_STRING; typedef struct ASN1_ENCODING_st { unsigned char *enc; long len; int modified; } ASN1_ENCODING; typedef struct asn1_string_table_st { int nid; long minsize; long maxsize; unsigned long mask; unsigned long flags; } ASN1_STRING_TABLE; #line 287 "/usr/include/openssl/asn1.h" typedef struct ASN1_TEMPLATE_st ASN1_TEMPLATE; typedef struct ASN1_ITEM_st ASN1_ITEM; typedef struct ASN1_TLC_st ASN1_TLC; typedef struct ASN1_VALUE_st ASN1_VALUE; #line 349 "/usr/include/openssl/asn1.h" typedef void *d2i_of_void(void * *,const unsigned char * *,long); typedef int i2d_of_void(void *,unsigned char * *); typedef const ASN1_ITEM ASN1_ITEM_EXP; #line 430 "/usr/include/openssl/asn1.h" #line 509 "/usr/include/openssl/asn1.h" typedef struct asn1_type_st { int type; union { char *ptr; ASN1_BOOLEAN boolean; ASN1_STRING *asn1_string; ASN1_OBJECT *object; ASN1_INTEGER *integer; ASN1_ENUMERATED *enumerated; ASN1_BIT_STRING *bit_string; ASN1_OCTET_STRING *octet_string; ASN1_PRINTABLESTRING *printablestring; ASN1_T61STRING *t61string; ASN1_IA5STRING *ia5string; ASN1_GENERALSTRING *generalstring; ASN1_BMPSTRING *bmpstring; ASN1_UNIVERSALSTRING *universalstring; ASN1_UTCTIME *utctime; ASN1_GENERALIZEDTIME *generalizedtime; ASN1_VISIBLESTRING *visiblestring; ASN1_UTF8STRING *utf8string; ASN1_STRING *set; ASN1_STRING *sequence; ASN1_VALUE *asn1_value; } value; } ASN1_TYPE; typedef struct asn1_method_st { i2d_of_void *i2d; d2i_of_void *d2i; void *(*create) (void); void (*destroy) (void *); } ASN1_METHOD; typedef struct asn1_header_st { ASN1_OCTET_STRING *header; void *data; ASN1_METHOD *meth; } ASN1_HEADER; typedef struct BIT_STRING_BITNAME_st { int bitnum; const char *lname; const char *sname; } BIT_STRING_BITNAME; #line 584 "/usr/include/openssl/asn1.h" #line 591 "/usr/include/openssl/asn1.h" #line 598 "/usr/include/openssl/asn1.h" #line 611 "/usr/include/openssl/asn1.h" #line 627 "/usr/include/openssl/asn1.h" #line 634 "/usr/include/openssl/asn1.h" #line 648 "/usr/include/openssl/asn1.h" #line 656 "/usr/include/openssl/asn1.h" #line 664 "/usr/include/openssl/asn1.h" #line 674 "/usr/include/openssl/asn1.h" #line 684 "/usr/include/openssl/asn1.h" #line 696 "/usr/include/openssl/asn1.h" #line 722 "/usr/include/openssl/asn1.h" #line 732 "/usr/include/openssl/asn1.h" #line 742 "/usr/include/openssl/asn1.h" #line 752 "/usr/include/openssl/asn1.h" #line 762 "/usr/include/openssl/asn1.h" ASN1_TYPE *ASN1_TYPE_new(void); void ASN1_TYPE_free(ASN1_TYPE *a); ASN1_TYPE *d2i_ASN1_TYPE(ASN1_TYPE * *a, const unsigned char * *in, long len); int i2d_ASN1_TYPE(ASN1_TYPE *a, unsigned char * *out); extern const ASN1_ITEM ASN1_ANY_it; int ASN1_TYPE_get(ASN1_TYPE *a); void ASN1_TYPE_set(ASN1_TYPE *a, int type, void *value); int ASN1_TYPE_set1(ASN1_TYPE *a, int type, const void *value); int ASN1_TYPE_cmp(const ASN1_TYPE *a, const ASN1_TYPE *b); ASN1_OBJECT *ASN1_OBJECT_new(void); void ASN1_OBJECT_free(ASN1_OBJECT *a); int i2d_ASN1_OBJECT(ASN1_OBJECT *a, unsigned char **pp); ASN1_OBJECT *c2i_ASN1_OBJECT(ASN1_OBJECT **a, const unsigned char **pp, long length); ASN1_OBJECT *d2i_ASN1_OBJECT(ASN1_OBJECT **a, const unsigned char **pp, long length); extern const ASN1_ITEM ASN1_OBJECT_it; ASN1_STRING *ASN1_STRING_new(void); void ASN1_STRING_free(ASN1_STRING *a); ASN1_STRING *ASN1_STRING_dup(ASN1_STRING *a); ASN1_STRING *ASN1_STRING_type_new(int type); int ASN1_STRING_cmp(ASN1_STRING *a, ASN1_STRING *b); int ASN1_STRING_set(ASN1_STRING *str, const void *data, int len); void ASN1_STRING_set0(ASN1_STRING *str, void *data, int len); int ASN1_STRING_length(ASN1_STRING *x); void ASN1_STRING_length_set(ASN1_STRING *x, int n); int ASN1_STRING_type(ASN1_STRING *x); unsigned char *ASN1_STRING_data(ASN1_STRING *x); ASN1_BIT_STRING *ASN1_BIT_STRING_new(void); void ASN1_BIT_STRING_free(ASN1_BIT_STRING *a); ASN1_BIT_STRING *d2i_ASN1_BIT_STRING(ASN1_BIT_STRING * *a, const unsigned char * *in, long len); int i2d_ASN1_BIT_STRING(ASN1_BIT_STRING *a, unsigned char * *out); extern const ASN1_ITEM ASN1_BIT_STRING_it; int i2c_ASN1_BIT_STRING(ASN1_BIT_STRING *a, unsigned char **pp); ASN1_BIT_STRING *c2i_ASN1_BIT_STRING(ASN1_BIT_STRING **a, const unsigned char **pp, long length); int ASN1_BIT_STRING_set(ASN1_BIT_STRING *a, unsigned char *d, int length); int ASN1_BIT_STRING_set_bit(ASN1_BIT_STRING *a, int n, int value); int ASN1_BIT_STRING_get_bit(ASN1_BIT_STRING *a, int n); int ASN1_BIT_STRING_name_print(BIO *out, ASN1_BIT_STRING *bs, BIT_STRING_BITNAME *tbl, int indent); int ASN1_BIT_STRING_num_asc(char *name, BIT_STRING_BITNAME *tbl); int ASN1_BIT_STRING_set_asc(ASN1_BIT_STRING *bs, char *name, int value, BIT_STRING_BITNAME *tbl); int i2d_ASN1_BOOLEAN(int a, unsigned char **pp); int d2i_ASN1_BOOLEAN(int *a, const unsigned char **pp, long length); ASN1_INTEGER *ASN1_INTEGER_new(void); void ASN1_INTEGER_free(ASN1_INTEGER *a); ASN1_INTEGER *d2i_ASN1_INTEGER(ASN1_INTEGER * *a, const unsigned char * *in, long len); int i2d_ASN1_INTEGER(ASN1_INTEGER *a, unsigned char * *out); extern const ASN1_ITEM ASN1_INTEGER_it; int i2c_ASN1_INTEGER(ASN1_INTEGER *a, unsigned char **pp); ASN1_INTEGER *c2i_ASN1_INTEGER(ASN1_INTEGER **a, const unsigned char **pp, long length); ASN1_INTEGER *d2i_ASN1_UINTEGER(ASN1_INTEGER **a, const unsigned char **pp, long length); ASN1_INTEGER *ASN1_INTEGER_dup(ASN1_INTEGER *x); int ASN1_INTEGER_cmp(ASN1_INTEGER *x, ASN1_INTEGER *y); ASN1_ENUMERATED *ASN1_ENUMERATED_new(void); void ASN1_ENUMERATED_free(ASN1_ENUMERATED *a); ASN1_ENUMERATED *d2i_ASN1_ENUMERATED(ASN1_ENUMERATED * *a, const unsigned char * *in, long len); int i2d_ASN1_ENUMERATED(ASN1_ENUMERATED *a, unsigned char * *out); extern const ASN1_ITEM ASN1_ENUMERATED_it; int ASN1_UTCTIME_check(ASN1_UTCTIME *a); ASN1_UTCTIME *ASN1_UTCTIME_set(ASN1_UTCTIME *s, time_t t); int ASN1_UTCTIME_set_string(ASN1_UTCTIME *s, const char *str); int ASN1_UTCTIME_cmp_time_t(const ASN1_UTCTIME *s, time_t t); int ASN1_GENERALIZEDTIME_check(ASN1_GENERALIZEDTIME *a); ASN1_GENERALIZEDTIME *ASN1_GENERALIZEDTIME_set(ASN1_GENERALIZEDTIME *s, time_t t); int ASN1_GENERALIZEDTIME_set_string(ASN1_GENERALIZEDTIME *s, const char *str); ASN1_OCTET_STRING *ASN1_OCTET_STRING_new(void); void ASN1_OCTET_STRING_free(ASN1_OCTET_STRING *a); ASN1_OCTET_STRING *d2i_ASN1_OCTET_STRING(ASN1_OCTET_STRING * *a, const unsigned char * *in, long len); int i2d_ASN1_OCTET_STRING(ASN1_OCTET_STRING *a, unsigned char * *out); extern const ASN1_ITEM ASN1_OCTET_STRING_it; ASN1_OCTET_STRING *ASN1_OCTET_STRING_dup(ASN1_OCTET_STRING *a); int ASN1_OCTET_STRING_cmp(ASN1_OCTET_STRING *a, ASN1_OCTET_STRING *b); int ASN1_OCTET_STRING_set(ASN1_OCTET_STRING *str, const unsigned char *data, int len); ASN1_VISIBLESTRING *ASN1_VISIBLESTRING_new(void); void ASN1_VISIBLESTRING_free(ASN1_VISIBLESTRING *a); ASN1_VISIBLESTRING *d2i_ASN1_VISIBLESTRING(ASN1_VISIBLESTRING * *a, const unsigned char * *in, long len); int i2d_ASN1_VISIBLESTRING(ASN1_VISIBLESTRING *a, unsigned char * *out); extern const ASN1_ITEM ASN1_VISIBLESTRING_it; ASN1_UNIVERSALSTRING *ASN1_UNIVERSALSTRING_new(void); void ASN1_UNIVERSALSTRING_free(ASN1_UNIVERSALSTRING *a); ASN1_UNIVERSALSTRING *d2i_ASN1_UNIVERSALSTRING(ASN1_UNIVERSALSTRING * *a, const unsigned char * *in, long len); int i2d_ASN1_UNIVERSALSTRING(ASN1_UNIVERSALSTRING *a, unsigned char * *out); extern const ASN1_ITEM ASN1_UNIVERSALSTRING_it; ASN1_UTF8STRING *ASN1_UTF8STRING_new(void); void ASN1_UTF8STRING_free(ASN1_UTF8STRING *a); ASN1_UTF8STRING *d2i_ASN1_UTF8STRING(ASN1_UTF8STRING * *a, const unsigned char * *in, long len); int i2d_ASN1_UTF8STRING(ASN1_UTF8STRING *a, unsigned char * *out); extern const ASN1_ITEM ASN1_UTF8STRING_it; ASN1_NULL *ASN1_NULL_new(void); void ASN1_NULL_free(ASN1_NULL *a); ASN1_NULL *d2i_ASN1_NULL(ASN1_NULL * *a, const unsigned char * *in, long len); int i2d_ASN1_NULL(ASN1_NULL *a, unsigned char * *out); extern const ASN1_ITEM ASN1_NULL_it; ASN1_BMPSTRING *ASN1_BMPSTRING_new(void); void ASN1_BMPSTRING_free(ASN1_BMPSTRING *a); ASN1_BMPSTRING *d2i_ASN1_BMPSTRING(ASN1_BMPSTRING * *a, const unsigned char * *in, long len); int i2d_ASN1_BMPSTRING(ASN1_BMPSTRING *a, unsigned char * *out); extern const ASN1_ITEM ASN1_BMPSTRING_it; int UTF8_getc(const unsigned char *str, int len, unsigned long *val); int UTF8_putc(unsigned char *str, int len, unsigned long value); ASN1_STRING *ASN1_PRINTABLE_new(void); void ASN1_PRINTABLE_free(ASN1_STRING *a); ASN1_STRING *d2i_ASN1_PRINTABLE(ASN1_STRING * *a, const unsigned char * *in, long len); int i2d_ASN1_PRINTABLE(ASN1_STRING *a, unsigned char * *out); extern const ASN1_ITEM ASN1_PRINTABLE_it; ASN1_STRING *DIRECTORYSTRING_new(void); void DIRECTORYSTRING_free(ASN1_STRING *a); ASN1_STRING *d2i_DIRECTORYSTRING(ASN1_STRING * *a, const unsigned char * *in, long len); int i2d_DIRECTORYSTRING(ASN1_STRING *a, unsigned char * *out); extern const ASN1_ITEM DIRECTORYSTRING_it; ASN1_STRING *DISPLAYTEXT_new(void); void DISPLAYTEXT_free(ASN1_STRING *a); ASN1_STRING *d2i_DISPLAYTEXT(ASN1_STRING * *a, const unsigned char * *in, long len); int i2d_DISPLAYTEXT(ASN1_STRING *a, unsigned char * *out); extern const ASN1_ITEM DISPLAYTEXT_it; ASN1_PRINTABLESTRING *ASN1_PRINTABLESTRING_new(void); void ASN1_PRINTABLESTRING_free(ASN1_PRINTABLESTRING *a); ASN1_PRINTABLESTRING *d2i_ASN1_PRINTABLESTRING(ASN1_PRINTABLESTRING * *a, const unsigned char * *in, long len); int i2d_ASN1_PRINTABLESTRING(ASN1_PRINTABLESTRING *a, unsigned char * *out); extern const ASN1_ITEM ASN1_PRINTABLESTRING_it; ASN1_T61STRING *ASN1_T61STRING_new(void); void ASN1_T61STRING_free(ASN1_T61STRING *a); ASN1_T61STRING *d2i_ASN1_T61STRING(ASN1_T61STRING * *a, const unsigned char * *in, long len); int i2d_ASN1_T61STRING(ASN1_T61STRING *a, unsigned char * *out); extern const ASN1_ITEM ASN1_T61STRING_it; ASN1_IA5STRING *ASN1_IA5STRING_new(void); void ASN1_IA5STRING_free(ASN1_IA5STRING *a); ASN1_IA5STRING *d2i_ASN1_IA5STRING(ASN1_IA5STRING * *a, const unsigned char * *in, long len); int i2d_ASN1_IA5STRING(ASN1_IA5STRING *a, unsigned char * *out); extern const ASN1_ITEM ASN1_IA5STRING_it; ASN1_GENERALSTRING *ASN1_GENERALSTRING_new(void); void ASN1_GENERALSTRING_free(ASN1_GENERALSTRING *a); ASN1_GENERALSTRING *d2i_ASN1_GENERALSTRING(ASN1_GENERALSTRING * *a, const unsigned char * *in, long len); int i2d_ASN1_GENERALSTRING(ASN1_GENERALSTRING *a, unsigned char * *out); extern const ASN1_ITEM ASN1_GENERALSTRING_it; ASN1_UTCTIME *ASN1_UTCTIME_new(void); void ASN1_UTCTIME_free(ASN1_UTCTIME *a); ASN1_UTCTIME *d2i_ASN1_UTCTIME(ASN1_UTCTIME * *a, const unsigned char * *in, long len); int i2d_ASN1_UTCTIME(ASN1_UTCTIME *a, unsigned char * *out); extern const ASN1_ITEM ASN1_UTCTIME_it; ASN1_GENERALIZEDTIME *ASN1_GENERALIZEDTIME_new(void); void ASN1_GENERALIZEDTIME_free(ASN1_GENERALIZEDTIME *a); ASN1_GENERALIZEDTIME *d2i_ASN1_GENERALIZEDTIME(ASN1_GENERALIZEDTIME * *a, const unsigned char * *in, long len); int i2d_ASN1_GENERALIZEDTIME(ASN1_GENERALIZEDTIME *a, unsigned char * *out); extern const ASN1_ITEM ASN1_GENERALIZEDTIME_it; ASN1_TIME *ASN1_TIME_new(void); void ASN1_TIME_free(ASN1_TIME *a); ASN1_TIME *d2i_ASN1_TIME(ASN1_TIME * *a, const unsigned char * *in, long len); int i2d_ASN1_TIME(ASN1_TIME *a, unsigned char * *out); extern const ASN1_ITEM ASN1_TIME_it; extern const ASN1_ITEM ASN1_OCTET_STRING_NDEF_it; ASN1_TIME *ASN1_TIME_set(ASN1_TIME *s, time_t t); int ASN1_TIME_check(ASN1_TIME *t); ASN1_GENERALIZEDTIME *ASN1_TIME_to_generalizedtime(ASN1_TIME *t, ASN1_GENERALIZEDTIME **out); int i2d_ASN1_SET(STACK * a, unsigned char **pp, i2d_of_void *i2d, int ex_tag, int ex_class, int is_set); STACK *d2i_ASN1_SET(STACK ** a, const unsigned char **pp, long length, d2i_of_void *d2i, void (*free_func) (void *), int ex_tag, int ex_class); int i2a_ASN1_INTEGER(BIO *bp, ASN1_INTEGER *a); int a2i_ASN1_INTEGER(BIO *bp, ASN1_INTEGER *bs, char *buf, int size); int i2a_ASN1_ENUMERATED(BIO *bp, ASN1_ENUMERATED *a); int a2i_ASN1_ENUMERATED(BIO *bp, ASN1_ENUMERATED *bs, char *buf, int size); int i2a_ASN1_OBJECT(BIO *bp, ASN1_OBJECT *a); int a2i_ASN1_STRING(BIO *bp, ASN1_STRING *bs, char *buf, int size); int i2a_ASN1_STRING(BIO *bp, ASN1_STRING *a, int type); int i2t_ASN1_OBJECT(char *buf, int buf_len, ASN1_OBJECT *a); int a2d_ASN1_OBJECT(unsigned char *out, int olen, const char *buf, int num); ASN1_OBJECT *ASN1_OBJECT_create(int nid, unsigned char *data, int len, const char *sn, const char *ln); int ASN1_INTEGER_set(ASN1_INTEGER *a, long v); long ASN1_INTEGER_get(ASN1_INTEGER *a); ASN1_INTEGER *BN_to_ASN1_INTEGER(BIGNUM *bn, ASN1_INTEGER *ai); BIGNUM *ASN1_INTEGER_to_BN(ASN1_INTEGER *ai, BIGNUM *bn); int ASN1_ENUMERATED_set(ASN1_ENUMERATED *a, long v); long ASN1_ENUMERATED_get(ASN1_ENUMERATED *a); ASN1_ENUMERATED *BN_to_ASN1_ENUMERATED(BIGNUM *bn, ASN1_ENUMERATED *ai); BIGNUM *ASN1_ENUMERATED_to_BN(ASN1_ENUMERATED *ai, BIGNUM *bn); int ASN1_PRINTABLE_type(const unsigned char *s, int max); int i2d_ASN1_bytes(ASN1_STRING *a, unsigned char **pp, int tag, int xclass); ASN1_STRING *d2i_ASN1_bytes(ASN1_STRING **a, const unsigned char **pp, long length, int Ptag, int Pclass); unsigned long ASN1_tag2bit(int tag); ASN1_STRING *d2i_ASN1_type_bytes(ASN1_STRING **a, const unsigned char **pp, long length, int type); int asn1_Finish(ASN1_CTX *c); int asn1_const_Finish(ASN1_const_CTX *c); int ASN1_get_object(const unsigned char **pp, long *plength, int *ptag, int *pclass, long omax); int ASN1_check_infinite_end(unsigned char **p, long len); int ASN1_const_check_infinite_end(const unsigned char **p, long len); void ASN1_put_object(unsigned char **pp, int constructed, int length, int tag, int xclass); int ASN1_put_eoc(unsigned char **pp); int ASN1_object_size(int constructed, int length, int tag); void *ASN1_dup(i2d_of_void *i2d, d2i_of_void *d2i, char *x); void *ASN1_item_dup(const ASN1_ITEM *it, void *x); void *ASN1_d2i_fp(void *(*xnew) (void), d2i_of_void *d2i, FILE *in, void **x); void *ASN1_item_d2i_fp(const ASN1_ITEM *it, FILE *in, void *x); int ASN1_i2d_fp(i2d_of_void *i2d, FILE *out, void *x); int ASN1_item_i2d_fp(const ASN1_ITEM *it, FILE *out, void *x); int ASN1_STRING_print_ex_fp(FILE *fp, ASN1_STRING *str, unsigned long flags); int ASN1_STRING_to_UTF8(unsigned char **out, ASN1_STRING *in); void *ASN1_d2i_bio(void *(*xnew) (void), d2i_of_void *d2i, BIO *in, void **x); void *ASN1_item_d2i_bio(const ASN1_ITEM *it, BIO *in, void *x); int ASN1_i2d_bio(i2d_of_void *i2d, BIO *out, unsigned char *x); int ASN1_item_i2d_bio(const ASN1_ITEM *it, BIO *out, void *x); int ASN1_UTCTIME_print(BIO *fp, ASN1_UTCTIME *a); int ASN1_GENERALIZEDTIME_print(BIO *fp, ASN1_GENERALIZEDTIME *a); int ASN1_TIME_print(BIO *fp, ASN1_TIME *a); int ASN1_STRING_print(BIO *bp, ASN1_STRING *v); int ASN1_STRING_print_ex(BIO *out, ASN1_STRING *str, unsigned long flags); int ASN1_parse(BIO *bp, const unsigned char *pp, long len, int indent); int ASN1_parse_dump(BIO *bp, const unsigned char *pp, long len, int indent, int dump); const char *ASN1_tag2str(int tag); int i2d_ASN1_HEADER(ASN1_HEADER * a, unsigned char **pp); ASN1_HEADER *d2i_ASN1_HEADER(ASN1_HEADER ** a, const unsigned char **pp, long length); ASN1_HEADER *ASN1_HEADER_new(void); void ASN1_HEADER_free(ASN1_HEADER * a); int ASN1_UNIVERSALSTRING_to_string(ASN1_UNIVERSALSTRING *s); ASN1_METHOD *X509_asn1_meth(void); ASN1_METHOD *RSAPrivateKey_asn1_meth(void); ASN1_METHOD *ASN1_IA5STRING_asn1_meth(void); ASN1_METHOD *ASN1_BIT_STRING_asn1_meth(void); int ASN1_TYPE_set_octetstring(ASN1_TYPE *a, unsigned char *data, int len); int ASN1_TYPE_get_octetstring(ASN1_TYPE *a, unsigned char *data, int max_len); int ASN1_TYPE_set_int_octetstring(ASN1_TYPE *a, long num, unsigned char *data, int len); int ASN1_TYPE_get_int_octetstring(ASN1_TYPE *a, long *num, unsigned char *data, int max_len); STACK *ASN1_seq_unpack(const unsigned char *buf, int len, d2i_of_void *d2i, void (*free_func) (void *)); unsigned char *ASN1_seq_pack(STACK * safes, i2d_of_void *i2d, unsigned char **buf, int *len); void *ASN1_unpack_string(ASN1_STRING *oct, d2i_of_void *d2i); void *ASN1_item_unpack(ASN1_STRING *oct, const ASN1_ITEM *it); ASN1_STRING *ASN1_pack_string(void *obj, i2d_of_void *i2d, ASN1_OCTET_STRING **oct); ASN1_STRING *ASN1_item_pack(void *obj, const ASN1_ITEM *it, ASN1_OCTET_STRING **oct); void ASN1_STRING_set_default_mask(unsigned long mask); int ASN1_STRING_set_default_mask_asc(const char *p); unsigned long ASN1_STRING_get_default_mask(void); int ASN1_mbstring_copy(ASN1_STRING **out, const unsigned char *in, int len, int inform, unsigned long mask); int ASN1_mbstring_ncopy(ASN1_STRING **out, const unsigned char *in, int len, int inform, unsigned long mask, long minsize, long maxsize); ASN1_STRING *ASN1_STRING_set_by_NID(ASN1_STRING **out, const unsigned char *in, int inlen, int inform, int nid); ASN1_STRING_TABLE *ASN1_STRING_TABLE_get(int nid); int ASN1_STRING_TABLE_add(int, long, long, unsigned long, unsigned long); void ASN1_STRING_TABLE_cleanup(void); ASN1_VALUE *ASN1_item_new(const ASN1_ITEM *it); void ASN1_item_free(ASN1_VALUE *val, const ASN1_ITEM *it); ASN1_VALUE *ASN1_item_d2i(ASN1_VALUE **val, const unsigned char **in, long len, const ASN1_ITEM *it); int ASN1_item_i2d(ASN1_VALUE *val, unsigned char **out, const ASN1_ITEM *it); int ASN1_item_ndef_i2d(ASN1_VALUE *val, unsigned char **out, const ASN1_ITEM *it); void ASN1_add_oid_module(void); ASN1_TYPE *ASN1_generate_nconf(char *str, CONF *nconf); ASN1_TYPE *ASN1_generate_v3(char *str, X509V3_CTX *cnf); typedef int asn1_output_data_fn(BIO *out, BIO *data, ASN1_VALUE *val, int flags, const ASN1_ITEM *it); int int_smime_write_ASN1(BIO *bio, ASN1_VALUE *val, BIO *data, int flags, int ctype_nid, int econt_nid, STACK *mdalgs, asn1_output_data_fn * data_fn, const ASN1_ITEM *it); ASN1_VALUE *SMIME_read_ASN1(BIO *bio, BIO **bcont, const ASN1_ITEM *it); void ERR_load_ASN1_strings(void); #line 1222 "/usr/include/openssl/asn1.h" #line 1339 "/usr/include/openssl/asn1.h" #line 966 "/usr/include/openssl/objects.h" #line 973 "/usr/include/openssl/objects.h" typedef struct obj_name_st { int type; int alias; const char *name; const char *data; } OBJ_NAME; int OBJ_NAME_init(void); int OBJ_NAME_new_index(unsigned long (*hash_func) (const char *), int (*cmp_func) (const char *, const char *), void (*free_func) (const char *, int, const char *)); const char *OBJ_NAME_get(const char *name, int type); int OBJ_NAME_add(const char *name, int type, const char *data); int OBJ_NAME_remove(const char *name, int type); void OBJ_NAME_cleanup(int type); void OBJ_NAME_do_all(int type, void (*fn) (const OBJ_NAME *, void *arg), void *arg); void OBJ_NAME_do_all_sorted(int type, void (*fn) (const OBJ_NAME *, void *arg), void *arg); ASN1_OBJECT *OBJ_dup(const ASN1_OBJECT *o); ASN1_OBJECT *OBJ_nid2obj(int n); const char *OBJ_nid2ln(int n); const char *OBJ_nid2sn(int n); int OBJ_obj2nid(const ASN1_OBJECT *o); ASN1_OBJECT *OBJ_txt2obj(const char *s, int no_name); int OBJ_obj2txt(char *buf, int buf_len, const ASN1_OBJECT *a, int no_name); int OBJ_txt2nid(const char *s); int OBJ_ln2nid(const char *s); int OBJ_sn2nid(const char *s); int OBJ_cmp(const ASN1_OBJECT *a, const ASN1_OBJECT *b); const char *OBJ_bsearch(const char *key, const char *base, int num, int size, int (*cmp) (const void *, const void *)); const char *OBJ_bsearch_ex(const char *key, const char *base, int num, int size, int (*cmp) (const void *, const void *), int flags); int OBJ_new_nid(int num); int OBJ_add_object(const ASN1_OBJECT *obj); int OBJ_create(const char *oid, const char *sn, const char *ln); void OBJ_cleanup(void); int OBJ_create_objects(BIO *in); void ERR_load_OBJ_strings(void); #line 1047 "/usr/include/openssl/objects.h" #line 99 "/usr/include/openssl/evp.h" #line 111 "/usr/include/openssl/evp.h" #line 122 "/usr/include/openssl/evp.h" struct evp_pkey_st { int type; int save_type; int references; union { char *ptr; struct rsa_st *rsa; struct dsa_st *dsa; struct dh_st *dh; } pkey; int save_parameters; STACK *attributes; } ; #line 219 "/usr/include/openssl/evp.h" struct env_md_st { int type; int pkey_type; int md_size; unsigned long flags; int (*init) (EVP_MD_CTX *ctx); int (*update) (EVP_MD_CTX *ctx, const void *data, size_t count); int (*final) (EVP_MD_CTX *ctx, unsigned char *md); int (*copy) (EVP_MD_CTX *to, const EVP_MD_CTX *from); int (*cleanup) (EVP_MD_CTX *ctx); int (*sign) (int type, const unsigned char *m, unsigned int m_length, unsigned char *sigret, unsigned int *siglen, void *key); int (*verify) (int type, const unsigned char *m, unsigned int m_length, const unsigned char *sigbuf, unsigned int siglen, void *key); int required_pkey_type[5]; int block_size; int ctx_size; } ; typedef int evp_sign_method(int type, const unsigned char *m, unsigned int m_length, unsigned char *sigret, unsigned int *siglen, void *key); typedef int evp_verify_method(int type, const unsigned char *m, unsigned int m_length, const unsigned char *sigbuf, unsigned int siglen, void *key); typedef struct { EVP_MD_CTX *mctx; void *key; } EVP_MD_SVCTX; #line 274 "/usr/include/openssl/evp.h" #line 288 "/usr/include/openssl/evp.h" struct env_md_ctx_st { const EVP_MD *digest; ENGINE *engine; unsigned long flags; void *md_data; } ; #line 309 "/usr/include/openssl/evp.h" #line 318 "/usr/include/openssl/evp.h" struct evp_cipher_st { int nid; int block_size; int key_len; int iv_len; unsigned long flags; int (*init) (EVP_CIPHER_CTX *ctx, const unsigned char *key, const unsigned char *iv, int enc); int (*do_cipher) (EVP_CIPHER_CTX *ctx, unsigned char *out, const unsigned char *in, unsigned int inl); int (*cleanup) (EVP_CIPHER_CTX *); int ctx_size; int (*set_asn1_parameters) (EVP_CIPHER_CTX *, ASN1_TYPE *); int (*get_asn1_parameters) (EVP_CIPHER_CTX *, ASN1_TYPE *); int (*ctrl) (EVP_CIPHER_CTX *, int type, int arg, void *ptr); void *app_data; } ; #line 357 "/usr/include/openssl/evp.h" #line 389 "/usr/include/openssl/evp.h" typedef struct evp_cipher_info_st { const EVP_CIPHER *cipher; unsigned char iv[16]; } EVP_CIPHER_INFO; struct evp_cipher_ctx_st { const EVP_CIPHER *cipher; ENGINE *engine; int encrypt; int buf_len; unsigned char oiv[16]; unsigned char iv[16]; unsigned char buf[32]; int num; void *app_data; int key_len; unsigned long flags; void *cipher_data; int final_used; int block_mask; unsigned char final[32]; } ; typedef struct evp_Encode_Ctx_st { int num; int length; unsigned char enc_data[80]; int line_num; int expect_nl; } EVP_ENCODE_CTX; typedef int (EVP_PBE_KEYGEN) (EVP_CIPHER_CTX *ctx, const char *pass, int passlen, ASN1_TYPE *param, const EVP_CIPHER *cipher, const EVP_MD *md, int en_de); #line 467 "/usr/include/openssl/evp.h" int EVP_MD_type(const EVP_MD *md); int EVP_MD_pkey_type(const EVP_MD *md); int EVP_MD_size(const EVP_MD *md); int EVP_MD_block_size(const EVP_MD *md); const EVP_MD *EVP_MD_CTX_md(const EVP_MD_CTX *ctx); int EVP_CIPHER_nid(const EVP_CIPHER *cipher); int EVP_CIPHER_block_size(const EVP_CIPHER *cipher); int EVP_CIPHER_key_length(const EVP_CIPHER *cipher); int EVP_CIPHER_iv_length(const EVP_CIPHER *cipher); unsigned long EVP_CIPHER_flags(const EVP_CIPHER *cipher); const EVP_CIPHER *EVP_CIPHER_CTX_cipher(const EVP_CIPHER_CTX *ctx); int EVP_CIPHER_CTX_nid(const EVP_CIPHER_CTX *ctx); int EVP_CIPHER_CTX_block_size(const EVP_CIPHER_CTX *ctx); int EVP_CIPHER_CTX_key_length(const EVP_CIPHER_CTX *ctx); int EVP_CIPHER_CTX_iv_length(const EVP_CIPHER_CTX *ctx); void *EVP_CIPHER_CTX_get_app_data(const EVP_CIPHER_CTX *ctx); void EVP_CIPHER_CTX_set_app_data(EVP_CIPHER_CTX *ctx, void *data); unsigned long EVP_CIPHER_CTX_flags(const EVP_CIPHER_CTX *ctx); #line 512 "/usr/include/openssl/evp.h" #line 523 "/usr/include/openssl/evp.h" int EVP_Cipher(EVP_CIPHER_CTX *c, unsigned char *out, const unsigned char *in, unsigned int inl); #line 535 "/usr/include/openssl/evp.h" void EVP_MD_CTX_init(EVP_MD_CTX *ctx); int EVP_MD_CTX_cleanup(EVP_MD_CTX *ctx); EVP_MD_CTX *EVP_MD_CTX_create(void); void EVP_MD_CTX_destroy(EVP_MD_CTX *ctx); int EVP_MD_CTX_copy_ex(EVP_MD_CTX *out, const EVP_MD_CTX *in); void EVP_MD_CTX_set_flags(EVP_MD_CTX *ctx, int flags); void EVP_MD_CTX_clear_flags(EVP_MD_CTX *ctx, int flags); int EVP_MD_CTX_test_flags(const EVP_MD_CTX *ctx, int flags); int EVP_DigestInit_ex(EVP_MD_CTX *ctx, const EVP_MD *type, ENGINE *impl); int EVP_DigestUpdate(EVP_MD_CTX *ctx, const void *d, size_t cnt); int EVP_DigestFinal_ex(EVP_MD_CTX *ctx, unsigned char *md, unsigned int *s); int EVP_Digest(const void *data, size_t count, unsigned char *md, unsigned int *size, const EVP_MD *type, ENGINE *impl); int EVP_MD_CTX_copy(EVP_MD_CTX *out, const EVP_MD_CTX *in); int EVP_DigestInit(EVP_MD_CTX *ctx, const EVP_MD *type); int EVP_DigestFinal(EVP_MD_CTX *ctx, unsigned char *md, unsigned int *s); int EVP_read_pw_string(char *buf, int length, const char *prompt, int verify); void EVP_set_pw_prompt(const char *prompt); char *EVP_get_pw_prompt(void); int EVP_BytesToKey(const EVP_CIPHER *type, const EVP_MD *md, const unsigned char *salt, const unsigned char *data, int datal, int count, unsigned char *key, unsigned char *iv); void EVP_CIPHER_CTX_set_flags(EVP_CIPHER_CTX *ctx, int flags); void EVP_CIPHER_CTX_clear_flags(EVP_CIPHER_CTX *ctx, int flags); int EVP_CIPHER_CTX_test_flags(const EVP_CIPHER_CTX *ctx, int flags); int EVP_EncryptInit(EVP_CIPHER_CTX *ctx, const EVP_CIPHER *cipher, const unsigned char *key, const unsigned char *iv); int EVP_EncryptInit_ex(EVP_CIPHER_CTX *ctx, const EVP_CIPHER *cipher, ENGINE *impl, const unsigned char *key, const unsigned char *iv); int EVP_EncryptUpdate(EVP_CIPHER_CTX *ctx, unsigned char *out, int *outl, const unsigned char *in, int inl); int EVP_EncryptFinal_ex(EVP_CIPHER_CTX *ctx, unsigned char *out, int *outl); int EVP_EncryptFinal(EVP_CIPHER_CTX *ctx, unsigned char *out, int *outl); int EVP_DecryptInit(EVP_CIPHER_CTX *ctx, const EVP_CIPHER *cipher, const unsigned char *key, const unsigned char *iv); int EVP_DecryptInit_ex(EVP_CIPHER_CTX *ctx, const EVP_CIPHER *cipher, ENGINE *impl, const unsigned char *key, const unsigned char *iv); int EVP_DecryptUpdate(EVP_CIPHER_CTX *ctx, unsigned char *out, int *outl, const unsigned char *in, int inl); int EVP_DecryptFinal(EVP_CIPHER_CTX *ctx, unsigned char *outm, int *outl); int EVP_DecryptFinal_ex(EVP_CIPHER_CTX *ctx, unsigned char *outm, int *outl); int EVP_CipherInit(EVP_CIPHER_CTX *ctx, const EVP_CIPHER *cipher, const unsigned char *key, const unsigned char *iv, int enc); int EVP_CipherInit_ex(EVP_CIPHER_CTX *ctx, const EVP_CIPHER *cipher, ENGINE *impl, const unsigned char *key, const unsigned char *iv, int enc); int EVP_CipherUpdate(EVP_CIPHER_CTX *ctx, unsigned char *out, int *outl, const unsigned char *in, int inl); int EVP_CipherFinal(EVP_CIPHER_CTX *ctx, unsigned char *outm, int *outl); int EVP_CipherFinal_ex(EVP_CIPHER_CTX *ctx, unsigned char *outm, int *outl); int EVP_SignFinal(EVP_MD_CTX *ctx, unsigned char *md, unsigned int *s, EVP_PKEY *pkey); int EVP_VerifyFinal(EVP_MD_CTX *ctx, const unsigned char *sigbuf, unsigned int siglen, EVP_PKEY *pkey); int EVP_OpenInit(EVP_CIPHER_CTX *ctx, const EVP_CIPHER *type, const unsigned char *ek, int ekl, const unsigned char *iv, EVP_PKEY *priv); int EVP_OpenFinal(EVP_CIPHER_CTX *ctx, unsigned char *out, int *outl); int EVP_SealInit(EVP_CIPHER_CTX *ctx, const EVP_CIPHER *type, unsigned char **ek, int *ekl, unsigned char *iv, EVP_PKEY **pubk, int npubk); int EVP_SealFinal(EVP_CIPHER_CTX *ctx, unsigned char *out, int *outl); void EVP_EncodeInit(EVP_ENCODE_CTX *ctx); void EVP_EncodeUpdate(EVP_ENCODE_CTX *ctx, unsigned char *out, int *outl, const unsigned char *in, int inl); void EVP_EncodeFinal(EVP_ENCODE_CTX *ctx, unsigned char *out, int *outl); int EVP_EncodeBlock(unsigned char *t, const unsigned char *f, int n); void EVP_DecodeInit(EVP_ENCODE_CTX *ctx); int EVP_DecodeUpdate(EVP_ENCODE_CTX *ctx, unsigned char *out, int *outl, const unsigned char *in, int inl); int EVP_DecodeFinal(EVP_ENCODE_CTX *ctx, unsigned char *out, int *outl); int EVP_DecodeBlock(unsigned char *t, const unsigned char *f, int n); void EVP_CIPHER_CTX_init(EVP_CIPHER_CTX *a); int EVP_CIPHER_CTX_cleanup(EVP_CIPHER_CTX *a); EVP_CIPHER_CTX *EVP_CIPHER_CTX_new(void); void EVP_CIPHER_CTX_free(EVP_CIPHER_CTX *a); int EVP_CIPHER_CTX_set_key_length(EVP_CIPHER_CTX *x, int keylen); int EVP_CIPHER_CTX_set_padding(EVP_CIPHER_CTX *c, int pad); int EVP_CIPHER_CTX_ctrl(EVP_CIPHER_CTX *ctx, int type, int arg, void *ptr); int EVP_CIPHER_CTX_rand_key(EVP_CIPHER_CTX *ctx, unsigned char *key); BIO_METHOD *BIO_f_md(void); BIO_METHOD *BIO_f_base64(void); BIO_METHOD *BIO_f_cipher(void); BIO_METHOD *BIO_f_reliable(void); void BIO_set_cipher(BIO *b, const EVP_CIPHER *c, const unsigned char *k, const unsigned char *i, int enc); const EVP_MD *EVP_md_null(void); const EVP_MD *EVP_md2(void); const EVP_MD *EVP_md4(void); const EVP_MD *EVP_md5(void); const EVP_MD *EVP_sha(void); const EVP_MD *EVP_sha1(void); const EVP_MD *EVP_dss(void); const EVP_MD *EVP_dss1(void); const EVP_MD *EVP_ecdsa(void); const EVP_MD *EVP_sha224(void); const EVP_MD *EVP_sha256(void); const EVP_MD *EVP_sha384(void); const EVP_MD *EVP_sha512(void); const EVP_MD *EVP_ripemd160(void); const EVP_CIPHER *EVP_enc_null(void); const EVP_CIPHER *EVP_des_ecb(void); const EVP_CIPHER *EVP_des_ede(void); const EVP_CIPHER *EVP_des_ede3(void); const EVP_CIPHER *EVP_des_ede_ecb(void); const EVP_CIPHER *EVP_des_ede3_ecb(void); const EVP_CIPHER *EVP_des_cfb64(void); const EVP_CIPHER *EVP_des_cfb1(void); const EVP_CIPHER *EVP_des_cfb8(void); const EVP_CIPHER *EVP_des_ede_cfb64(void); const EVP_CIPHER *EVP_des_ede3_cfb64(void); const EVP_CIPHER *EVP_des_ede3_cfb1(void); const EVP_CIPHER *EVP_des_ede3_cfb8(void); const EVP_CIPHER *EVP_des_ofb(void); const EVP_CIPHER *EVP_des_ede_ofb(void); const EVP_CIPHER *EVP_des_ede3_ofb(void); const EVP_CIPHER *EVP_des_cbc(void); const EVP_CIPHER *EVP_des_ede_cbc(void); const EVP_CIPHER *EVP_des_ede3_cbc(void); const EVP_CIPHER *EVP_desx_cbc(void); #line 716 "/usr/include/openssl/evp.h" const EVP_CIPHER *EVP_rc4(void); const EVP_CIPHER *EVP_rc4_40(void); const EVP_CIPHER *EVP_rc2_ecb(void); const EVP_CIPHER *EVP_rc2_cbc(void); const EVP_CIPHER *EVP_rc2_40_cbc(void); const EVP_CIPHER *EVP_rc2_64_cbc(void); const EVP_CIPHER *EVP_rc2_cfb64(void); const EVP_CIPHER *EVP_rc2_ofb(void); const EVP_CIPHER *EVP_bf_ecb(void); const EVP_CIPHER *EVP_bf_cbc(void); const EVP_CIPHER *EVP_bf_cfb64(void); const EVP_CIPHER *EVP_bf_ofb(void); const EVP_CIPHER *EVP_cast5_ecb(void); const EVP_CIPHER *EVP_cast5_cbc(void); const EVP_CIPHER *EVP_cast5_cfb64(void); const EVP_CIPHER *EVP_cast5_ofb(void); const EVP_CIPHER *EVP_aes_128_ecb(void); const EVP_CIPHER *EVP_aes_128_cbc(void); const EVP_CIPHER *EVP_aes_128_cfb1(void); const EVP_CIPHER *EVP_aes_128_cfb8(void); const EVP_CIPHER *EVP_aes_128_cfb128(void); const EVP_CIPHER *EVP_aes_128_ofb(void); const EVP_CIPHER *EVP_aes_192_ecb(void); const EVP_CIPHER *EVP_aes_192_cbc(void); const EVP_CIPHER *EVP_aes_192_cfb1(void); const EVP_CIPHER *EVP_aes_192_cfb8(void); const EVP_CIPHER *EVP_aes_192_cfb128(void); const EVP_CIPHER *EVP_aes_192_ofb(void); const EVP_CIPHER *EVP_aes_256_ecb(void); const EVP_CIPHER *EVP_aes_256_cbc(void); const EVP_CIPHER *EVP_aes_256_cfb1(void); const EVP_CIPHER *EVP_aes_256_cfb8(void); const EVP_CIPHER *EVP_aes_256_cfb128(void); const EVP_CIPHER *EVP_aes_256_ofb(void); #line 797 "/usr/include/openssl/evp.h" #line 805 "/usr/include/openssl/evp.h" void OPENSSL_add_all_algorithms_noconf(void); void OPENSSL_add_all_algorithms_conf(void); #line 816 "/usr/include/openssl/evp.h" void OpenSSL_add_all_ciphers(void); void OpenSSL_add_all_digests(void); int EVP_add_cipher(const EVP_CIPHER *cipher); int EVP_add_digest(const EVP_MD *digest); const EVP_CIPHER *EVP_get_cipherbyname(const char *name); const EVP_MD *EVP_get_digestbyname(const char *name); void EVP_cleanup(void); int EVP_PKEY_decrypt(unsigned char *dec_key, const unsigned char *enc_key, int enc_key_len, EVP_PKEY *private_key); int EVP_PKEY_encrypt(unsigned char *enc_key, const unsigned char *key, int key_len, EVP_PKEY *pub_key); int EVP_PKEY_type(int type); int EVP_PKEY_bits(EVP_PKEY *pkey); int EVP_PKEY_size(EVP_PKEY *pkey); int EVP_PKEY_assign(EVP_PKEY *pkey, int type, char *key); struct rsa_st; int EVP_PKEY_set1_RSA(EVP_PKEY *pkey, struct rsa_st *key); struct rsa_st *EVP_PKEY_get1_RSA(EVP_PKEY *pkey); struct dsa_st; int EVP_PKEY_set1_DSA(EVP_PKEY *pkey, struct dsa_st *key); struct dsa_st *EVP_PKEY_get1_DSA(EVP_PKEY *pkey); struct dh_st; int EVP_PKEY_set1_DH(EVP_PKEY *pkey, struct dh_st *key); struct dh_st *EVP_PKEY_get1_DH(EVP_PKEY *pkey); EVP_PKEY *EVP_PKEY_new(void); void EVP_PKEY_free(EVP_PKEY *pkey); EVP_PKEY *d2i_PublicKey(int type, EVP_PKEY **a, const unsigned char **pp, long length); int i2d_PublicKey(EVP_PKEY *a, unsigned char **pp); EVP_PKEY *d2i_PrivateKey(int type, EVP_PKEY **a, const unsigned char **pp, long length); EVP_PKEY *d2i_AutoPrivateKey(EVP_PKEY **a, const unsigned char **pp, long length); int i2d_PrivateKey(EVP_PKEY *a, unsigned char **pp); int EVP_PKEY_copy_parameters(EVP_PKEY *to, const EVP_PKEY *from); int EVP_PKEY_missing_parameters(const EVP_PKEY *pkey); int EVP_PKEY_save_parameters(EVP_PKEY *pkey, int mode); int EVP_PKEY_cmp_parameters(const EVP_PKEY *a, const EVP_PKEY *b); int EVP_PKEY_cmp(const EVP_PKEY *a, const EVP_PKEY *b); int EVP_CIPHER_type(const EVP_CIPHER *ctx); int EVP_CIPHER_param_to_asn1(EVP_CIPHER_CTX *c, ASN1_TYPE *type); int EVP_CIPHER_asn1_to_param(EVP_CIPHER_CTX *c, ASN1_TYPE *type); int EVP_CIPHER_set_asn1_iv(EVP_CIPHER_CTX *c, ASN1_TYPE *type); int EVP_CIPHER_get_asn1_iv(EVP_CIPHER_CTX *c, ASN1_TYPE *type); int PKCS5_PBE_keyivgen(EVP_CIPHER_CTX *ctx, const char *pass, int passlen, ASN1_TYPE *param, const EVP_CIPHER *cipher, const EVP_MD *md, int en_de); int PKCS5_PBKDF2_HMAC_SHA1(const char *pass, int passlen, const unsigned char *salt, int saltlen, int iter, int keylen, unsigned char *out); int PKCS5_v2_PBE_keyivgen(EVP_CIPHER_CTX *ctx, const char *pass, int passlen, ASN1_TYPE *param, const EVP_CIPHER *cipher, const EVP_MD *md, int en_de); void PKCS5_PBE_add(void); int EVP_PBE_CipherInit(ASN1_OBJECT *pbe_obj, const char *pass, int passlen, ASN1_TYPE *param, EVP_CIPHER_CTX *ctx, int en_de); int EVP_PBE_alg_add(int nid, const EVP_CIPHER *cipher, const EVP_MD *md, EVP_PBE_KEYGEN *keygen); void EVP_PBE_cleanup(void); #line 922 "/usr/include/openssl/evp.h" void EVP_add_alg_module(void); void ERR_load_EVP_strings(void); #line 978 "/usr/include/openssl/evp.h" #line 1032 "/usr/include/openssl/evp.h" #line 74 "/usr/include/openssl/x509.h" #line 81 "/usr/include/openssl/x509.h" #line 1 "/usr/include/openssl/rsa.h" #line 72 "/usr/include/openssl/rsa.h" struct rsa_meth_st { const char *name; int (*rsa_pub_enc) (int flen, const unsigned char *from, unsigned char *to, RSA *rsa, int padding); int (*rsa_pub_dec) (int flen, const unsigned char *from, unsigned char *to, RSA *rsa, int padding); int (*rsa_priv_enc) (int flen, const unsigned char *from, unsigned char *to, RSA *rsa, int padding); int (*rsa_priv_dec) (int flen, const unsigned char *from, unsigned char *to, RSA *rsa, int padding); int (*rsa_mod_exp) (BIGNUM *r0, const BIGNUM *I, RSA *rsa, BN_CTX *ctx); int (*bn_mod_exp) (BIGNUM *r, const BIGNUM *a, const BIGNUM *p, const BIGNUM *m, BN_CTX *ctx, BN_MONT_CTX *m_ctx); int (*init) (RSA *rsa); int (*finish) (RSA *rsa); int flags; char *app_data; int (*rsa_sign) (int type, const unsigned char *m, unsigned int m_length, unsigned char *sigret, unsigned int *siglen, const RSA *rsa); int (*rsa_verify) (int dtype, const unsigned char *m, unsigned int m_length, unsigned char *sigbuf, unsigned int siglen, const RSA *rsa); int (*rsa_keygen) (RSA *rsa, int bits, BIGNUM *e, BN_GENCB *cb); }; struct rsa_st { int pad; long version; const RSA_METHOD *meth; ENGINE *engine; BIGNUM *n; BIGNUM *e; BIGNUM *d; BIGNUM *p; BIGNUM *q; BIGNUM *dmp1; BIGNUM *dmq1; BIGNUM *iqmp; CRYPTO_EX_DATA ex_data; int references; int flags; BN_MONT_CTX *_method_mod_n; BN_MONT_CTX *_method_mod_p; BN_MONT_CTX *_method_mod_q; char *bignum_data; BN_BLINDING *blinding; BN_BLINDING *mt_blinding; }; #line 258 "/usr/include/openssl/rsa.h" RSA *RSA_new(void); RSA *RSA_new_method(ENGINE *engine); int RSA_size(const RSA *); RSA *RSA_generate_key(int bits, unsigned long e, void (*callback) (int, int, void *), void *cb_arg); int RSA_generate_key_ex(RSA *rsa, int bits, BIGNUM *e, BN_GENCB *cb); int RSA_X931_derive_ex(RSA *rsa, BIGNUM *p1, BIGNUM *p2, BIGNUM *q1, BIGNUM *q2, const BIGNUM *Xp1, const BIGNUM *Xp2, const BIGNUM *Xp, const BIGNUM *Xq1, const BIGNUM *Xq2, const BIGNUM *Xq, const BIGNUM *e, BN_GENCB *cb); int RSA_X931_generate_key_ex(RSA *rsa, int bits, const BIGNUM *e, BN_GENCB *cb); int RSA_check_key(const RSA *); int RSA_public_encrypt(int flen, const unsigned char *from, unsigned char *to, RSA *rsa, int padding); int RSA_private_encrypt(int flen, const unsigned char *from, unsigned char *to, RSA *rsa, int padding); int RSA_public_decrypt(int flen, const unsigned char *from, unsigned char *to, RSA *rsa, int padding); int RSA_private_decrypt(int flen, const unsigned char *from, unsigned char *to, RSA *rsa, int padding); void RSA_free(RSA *r); int RSA_up_ref(RSA *r); int RSA_flags(const RSA *r); void RSA_set_default_method(const RSA_METHOD *meth); const RSA_METHOD *RSA_get_default_method(void); const RSA_METHOD *RSA_get_method(const RSA *rsa); int RSA_set_method(RSA *rsa, const RSA_METHOD *meth); int RSA_memory_lock(RSA *r); const RSA_METHOD *RSA_PKCS1_SSLeay(void); const RSA_METHOD *RSA_null_method(void); RSA *d2i_RSAPublicKey(RSA * *a, const unsigned char * *in, long len); int i2d_RSAPublicKey(const RSA *a, unsigned char * *out); extern const ASN1_ITEM RSAPublicKey_it; RSA *d2i_RSAPrivateKey(RSA * *a, const unsigned char * *in, long len); int i2d_RSAPrivateKey(const RSA *a, unsigned char * *out); extern const ASN1_ITEM RSAPrivateKey_it; int RSA_print_fp(FILE *fp, const RSA *r, int offset); int RSA_print(BIO *bp, const RSA *r, int offset); int i2d_RSA_NET(const RSA *a, unsigned char **pp, int (*cb) (char *buf, int len, const char *prompt, int verify), int sgckey); RSA *d2i_RSA_NET(RSA **a, const unsigned char **pp, long length, int (*cb) (char *buf, int len, const char *prompt, int verify), int sgckey); int i2d_Netscape_RSA(const RSA *a, unsigned char **pp, int (*cb) (char *buf, int len, const char *prompt, int verify)); RSA *d2i_Netscape_RSA(RSA **a, const unsigned char **pp, long length, int (*cb) (char *buf, int len, const char *prompt, int verify)); int RSA_sign(int type, const unsigned char *m, unsigned int m_length, unsigned char *sigret, unsigned int *siglen, RSA *rsa); int RSA_verify(int type, const unsigned char *m, unsigned int m_length, unsigned char *sigbuf, unsigned int siglen, RSA *rsa); int RSA_sign_ASN1_OCTET_STRING(int type, const unsigned char *m, unsigned int m_length, unsigned char *sigret, unsigned int *siglen, RSA *rsa); int RSA_verify_ASN1_OCTET_STRING(int type, const unsigned char *m, unsigned int m_length, unsigned char *sigbuf, unsigned int siglen, RSA *rsa); int RSA_blinding_on(RSA *rsa, BN_CTX *ctx); void RSA_blinding_off(RSA *rsa); BN_BLINDING *RSA_setup_blinding(RSA *rsa, BN_CTX *ctx); int RSA_padding_add_PKCS1_type_1(unsigned char *to, int tlen, const unsigned char *f, int fl); int RSA_padding_check_PKCS1_type_1(unsigned char *to, int tlen, const unsigned char *f, int fl, int rsa_len); int RSA_padding_add_PKCS1_type_2(unsigned char *to, int tlen, const unsigned char *f, int fl); int RSA_padding_check_PKCS1_type_2(unsigned char *to, int tlen, const unsigned char *f, int fl, int rsa_len); int PKCS1_MGF1(unsigned char *mask, long len, const unsigned char *seed, long seedlen, const EVP_MD *dgst); int RSA_padding_add_PKCS1_OAEP(unsigned char *to, int tlen, const unsigned char *f, int fl, const unsigned char *p, int pl); int RSA_padding_check_PKCS1_OAEP(unsigned char *to, int tlen, const unsigned char *f, int fl, int rsa_len, const unsigned char *p, int pl); int RSA_padding_add_SSLv23(unsigned char *to, int tlen, const unsigned char *f, int fl); int RSA_padding_check_SSLv23(unsigned char *to, int tlen, const unsigned char *f, int fl, int rsa_len); int RSA_padding_add_none(unsigned char *to, int tlen, const unsigned char *f, int fl); int RSA_padding_check_none(unsigned char *to, int tlen, const unsigned char *f, int fl, int rsa_len); int RSA_padding_add_X931(unsigned char *to, int tlen, const unsigned char *f, int fl); int RSA_padding_check_X931(unsigned char *to, int tlen, const unsigned char *f, int fl, int rsa_len); int RSA_X931_hash_id(int nid); int RSA_verify_PKCS1_PSS(RSA *rsa, const unsigned char *mHash, const EVP_MD *Hash, const unsigned char *EM, int sLen); int RSA_padding_add_PKCS1_PSS(RSA *rsa, unsigned char *EM, const unsigned char *mHash, const EVP_MD *Hash, int sLen); int RSA_get_ex_new_index(long argl, void *argp, CRYPTO_EX_new *new_func, CRYPTO_EX_dup *dup_func, CRYPTO_EX_free *free_func); int RSA_set_ex_data(RSA *r, int idx, void *arg); void *RSA_get_ex_data(const RSA *r, int idx); RSA *RSAPublicKey_dup(RSA *rsa); RSA *RSAPrivateKey_dup(RSA *rsa); void ERR_load_RSA_strings(void); #line 475 "/usr/include/openssl/rsa.h" #line 521 "/usr/include/openssl/rsa.h" #line 88 "/usr/include/openssl/x509.h" #line 1 "/usr/include/openssl/dsa.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 69 "/usr/include/openssl/dsa.h" #line 1 "/usr/include/openssl/dh.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 63 "/usr/include/openssl/dh.h" #line 75 "/usr/include/openssl/dh.h" struct dh_method { const char *name; int (*generate_key) (DH *dh); int (*compute_key) (unsigned char *key, const BIGNUM *pub_key, DH *dh); int (*bn_mod_exp) (const DH *dh, BIGNUM *r, const BIGNUM *a, const BIGNUM *p, const BIGNUM *m, BN_CTX *ctx, BN_MONT_CTX *m_ctx); int (*init) (DH *dh); int (*finish) (DH *dh); int flags; char *app_data; int (*generate_params) (DH *dh, int prime_len, int generator, BN_GENCB *cb); }; struct dh_st { int pad; int version; BIGNUM *p; BIGNUM *g; long length; BIGNUM *pub_key; BIGNUM *priv_key; int flags; BN_MONT_CTX *method_mont_p; BIGNUM *q; BIGNUM *j; unsigned char *seed; int seedlen; BIGNUM *counter; int references; CRYPTO_EX_DATA ex_data; const DH_METHOD *meth; ENGINE *engine; }; #line 173 "/usr/include/openssl/dh.h" const DH_METHOD *DH_OpenSSL(void); void DH_set_default_method(const DH_METHOD *meth); const DH_METHOD *DH_get_default_method(void); int DH_set_method(DH *dh, const DH_METHOD *meth); DH *DH_new_method(ENGINE *engine); DH *DH_new(void); void DH_free(DH *dh); int DH_up_ref(DH *dh); int DH_size(const DH *dh); int DH_get_ex_new_index(long argl, void *argp, CRYPTO_EX_new *new_func, CRYPTO_EX_dup *dup_func, CRYPTO_EX_free *free_func); int DH_set_ex_data(DH *d, int idx, void *arg); void *DH_get_ex_data(DH *d, int idx); DH *DH_generate_parameters(int prime_len, int generator, void (*callback) (int, int, void *), void *cb_arg); int DH_generate_parameters_ex(DH *dh, int prime_len, int generator, BN_GENCB *cb); int DH_check(const DH *dh, int *codes); int DH_check_pub_key(const DH *dh, const BIGNUM *pub_key, int *codes); int DH_generate_key(DH *dh); int DH_compute_key(unsigned char *key, const BIGNUM *pub_key, DH *dh); DH *d2i_DHparams(DH **a, const unsigned char **pp, long length); int i2d_DHparams(const DH *a, unsigned char **pp); int DHparams_print_fp(FILE *fp, const DH *x); int DHparams_print(BIO *bp, const DH *x); void ERR_load_DH_strings(void); #line 240 "/usr/include/openssl/dh.h" #line 84 "/usr/include/openssl/dsa.h" typedef struct DSA_SIG_st { BIGNUM *r; BIGNUM *s; } DSA_SIG; struct dsa_method { const char *name; DSA_SIG *(*dsa_do_sign) (const unsigned char *dgst, int dlen, DSA *dsa); int (*dsa_sign_setup) (DSA *dsa, BN_CTX *ctx_in, BIGNUM **kinvp, BIGNUM **rp); int (*dsa_do_verify) (const unsigned char *dgst, int dgst_len, DSA_SIG *sig, DSA *dsa); int (*dsa_mod_exp) (DSA *dsa, BIGNUM *rr, BIGNUM *a1, BIGNUM *p1, BIGNUM *a2, BIGNUM *p2, BIGNUM *m, BN_CTX *ctx, BN_MONT_CTX *in_mont); int (*bn_mod_exp) (DSA *dsa, BIGNUM *r, BIGNUM *a, const BIGNUM *p, const BIGNUM *m, BN_CTX *ctx, BN_MONT_CTX *m_ctx); int (*init) (DSA *dsa); int (*finish) (DSA *dsa); int flags; char *app_data; int (*dsa_paramgen) (DSA *dsa, int bits, unsigned char *seed, int seed_len, int *counter_ret, unsigned long *h_ret, BN_GENCB *cb); int (*dsa_keygen) (DSA *dsa); }; struct dsa_st { int pad; long version; int write_params; BIGNUM *p; BIGNUM *q; BIGNUM *g; BIGNUM *pub_key; BIGNUM *priv_key; BIGNUM *kinv; BIGNUM *r; int flags; BN_MONT_CTX *method_mont_p; int references; CRYPTO_EX_DATA ex_data; const DSA_METHOD *meth; ENGINE *engine; }; #line 193 "/usr/include/openssl/dsa.h" DSA_SIG *DSA_SIG_new(void); void DSA_SIG_free(DSA_SIG *a); int i2d_DSA_SIG(const DSA_SIG *a, unsigned char **pp); DSA_SIG *d2i_DSA_SIG(DSA_SIG **v, const unsigned char **pp, long length); DSA_SIG *DSA_do_sign(const unsigned char *dgst, int dlen, DSA *dsa); int DSA_do_verify(const unsigned char *dgst, int dgst_len, DSA_SIG *sig, DSA *dsa); const DSA_METHOD *DSA_OpenSSL(void); void DSA_set_default_method(const DSA_METHOD *); const DSA_METHOD *DSA_get_default_method(void); int DSA_set_method(DSA *dsa, const DSA_METHOD *); DSA *DSA_new(void); DSA *DSA_new_method(ENGINE *engine); void DSA_free(DSA *r); int DSA_up_ref(DSA *r); int DSA_size(const DSA *); int DSA_sign_setup(DSA *dsa, BN_CTX *ctx_in, BIGNUM **kinvp, BIGNUM **rp); int DSA_sign(int type, const unsigned char *dgst, int dlen, unsigned char *sig, unsigned int *siglen, DSA *dsa); int DSA_verify(int type, const unsigned char *dgst, int dgst_len, const unsigned char *sigbuf, int siglen, DSA *dsa); int DSA_get_ex_new_index(long argl, void *argp, CRYPTO_EX_new *new_func, CRYPTO_EX_dup *dup_func, CRYPTO_EX_free *free_func); int DSA_set_ex_data(DSA *d, int idx, void *arg); void *DSA_get_ex_data(DSA *d, int idx); DSA *d2i_DSAPublicKey(DSA **a, const unsigned char **pp, long length); DSA *d2i_DSAPrivateKey(DSA **a, const unsigned char **pp, long length); DSA *d2i_DSAparams(DSA **a, const unsigned char **pp, long length); DSA *DSA_generate_parameters(int bits, unsigned char *seed, int seed_len, int *counter_ret, unsigned long *h_ret, void (*callback) (int, int, void *), void *cb_arg); int DSA_generate_parameters_ex(DSA *dsa, int bits, unsigned char *seed, int seed_len, int *counter_ret, unsigned long *h_ret, BN_GENCB *cb); int DSA_generate_key(DSA *a); int i2d_DSAPublicKey(const DSA *a, unsigned char **pp); int i2d_DSAPrivateKey(const DSA *a, unsigned char **pp); int i2d_DSAparams(const DSA *a, unsigned char **pp); int DSAparams_print(BIO *bp, const DSA *x); int DSA_print(BIO *bp, const DSA *x, int off); int DSAparams_print_fp(FILE *fp, const DSA *x); int DSA_print_fp(FILE *bp, const DSA *x, int off); DH *DSA_dup_DH(const DSA *r); void ERR_load_DSA_strings(void); #line 313 "/usr/include/openssl/dsa.h" #line 322 "/usr/include/openssl/dsa.h" #line 91 "/usr/include/openssl/x509.h" #line 1 "/usr/include/openssl/sha.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 63 "/usr/include/openssl/sha.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "/usr/include/openssl/sha.h" #line 92 "/usr/include/openssl/sha.h" #line 99 "/usr/include/openssl/sha.h" typedef struct SHAstate_st { unsigned int h0, h1, h2, h3, h4; unsigned int Nl, Nh; unsigned int data[16]; unsigned int num; } SHA_CTX; int SHA_Init(SHA_CTX *c); int SHA_Update(SHA_CTX *c, const void *data, size_t len); int SHA_Final(unsigned char *md, SHA_CTX *c); unsigned char *SHA(const unsigned char *d, size_t n, unsigned char *md); void SHA_Transform(SHA_CTX *c, const unsigned char *data); int SHA1_Init(SHA_CTX *c); int SHA1_Update(SHA_CTX *c, const void *data, size_t len); int SHA1_Final(unsigned char *md, SHA_CTX *c); unsigned char *SHA1(const unsigned char *d, size_t n, unsigned char *md); void SHA1_Transform(SHA_CTX *c, const unsigned char *data); typedef struct SHA256state_st { unsigned int h[8]; unsigned int Nl, Nh; unsigned int data[16]; unsigned int num, md_len; } SHA256_CTX; int SHA224_Init(SHA256_CTX *c); int SHA224_Update(SHA256_CTX *c, const void *data, size_t len); int SHA224_Final(unsigned char *md, SHA256_CTX *c); unsigned char *SHA224(const unsigned char *d, size_t n, unsigned char *md); int SHA256_Init(SHA256_CTX *c); int SHA256_Update(SHA256_CTX *c, const void *data, size_t len); int SHA256_Final(unsigned char *md, SHA256_CTX *c); unsigned char *SHA256(const unsigned char *d, size_t n, unsigned char *md); void SHA256_Transform(SHA256_CTX *c, const unsigned char *data); #line 175 "/usr/include/openssl/sha.h" typedef struct SHA512state_st { unsigned long h[8]; unsigned long Nl, Nh; union { unsigned long d[16]; unsigned char p[(16*8)]; } u; unsigned int num, md_len; } SHA512_CTX; int SHA384_Init(SHA512_CTX *c); int SHA384_Update(SHA512_CTX *c, const void *data, size_t len); int SHA384_Final(unsigned char *md, SHA512_CTX *c); unsigned char *SHA384(const unsigned char *d, size_t n, unsigned char *md); int SHA512_Init(SHA512_CTX *c); int SHA512_Update(SHA512_CTX *c, const void *data, size_t len); int SHA512_Final(unsigned char *md, SHA512_CTX *c); unsigned char *SHA512(const unsigned char *d, size_t n, unsigned char *md); void SHA512_Transform(SHA512_CTX *c, const unsigned char *data); #line 99 "/usr/include/openssl/x509.h" #line 112 "/usr/include/openssl/x509.h" #line 127 "/usr/include/openssl/x509.h" typedef struct X509_objects_st { int nid; int (*a2i) (void); int (*i2a) (void); } X509_OBJECTS; struct X509_algor_st { ASN1_OBJECT *algorithm; ASN1_TYPE *parameter; } ; typedef STACK X509_ALGORS; typedef struct X509_val_st { ASN1_TIME *notBefore; ASN1_TIME *notAfter; } X509_VAL; typedef struct X509_pubkey_st { X509_ALGOR *algor; ASN1_BIT_STRING *public_key; EVP_PKEY *pkey; } X509_PUBKEY; typedef struct X509_sig_st { X509_ALGOR *algor; ASN1_OCTET_STRING *digest; } X509_SIG; typedef struct X509_name_entry_st { ASN1_OBJECT *object; ASN1_STRING *value; int set; int size; } X509_NAME_ENTRY; struct X509_name_st { STACK *entries; int modified; BUF_MEM *bytes; unsigned long hash; } ; typedef struct X509_extension_st { ASN1_OBJECT *object; ASN1_BOOLEAN critical; ASN1_OCTET_STRING *value; } X509_EXTENSION; typedef STACK X509_EXTENSIONS; typedef struct x509_attributes_st { ASN1_OBJECT *object; int single; union { char *ptr; STACK *set; ASN1_TYPE *single; } value; } X509_ATTRIBUTE; typedef struct X509_req_info_st { ASN1_ENCODING enc; ASN1_INTEGER *version; X509_NAME *subject; X509_PUBKEY *pubkey; STACK *attributes; } X509_REQ_INFO; typedef struct X509_req_st { X509_REQ_INFO *req_info; X509_ALGOR *sig_alg; ASN1_BIT_STRING *signature; int references; } X509_REQ; typedef struct x509_cinf_st { ASN1_INTEGER *version; ASN1_INTEGER *serialNumber; X509_ALGOR *signature; X509_NAME *issuer; X509_VAL *validity; X509_NAME *subject; X509_PUBKEY *key; ASN1_BIT_STRING *issuerUID; ASN1_BIT_STRING *subjectUID; STACK *extensions; ASN1_ENCODING enc; } X509_CINF; typedef struct x509_cert_aux_st { STACK *trust; STACK *reject; ASN1_UTF8STRING *alias; ASN1_OCTET_STRING *keyid; STACK *other; } X509_CERT_AUX; struct x509_st { X509_CINF *cert_info; X509_ALGOR *sig_alg; ASN1_BIT_STRING *signature; int valid; int references; char *name; CRYPTO_EX_DATA ex_data; long ex_pathlen; long ex_pcpathlen; unsigned long ex_flags; unsigned long ex_kusage; unsigned long ex_xkusage; unsigned long ex_nscert; ASN1_OCTET_STRING *skid; struct AUTHORITY_KEYID_st *akid; X509_POLICY_CACHE *policy_cache; unsigned char sha1_hash[20]; X509_CERT_AUX *aux; } ; typedef struct x509_trust_st { int trust; int flags; int (*check_trust) (struct x509_trust_st *, X509 *, int); char *name; int arg1; void *arg2; } X509_TRUST; typedef struct x509_cert_pair_st { X509 *forward; X509 *reverse; } X509_CERT_PAIR; #line 319 "/usr/include/openssl/x509.h" #line 349 "/usr/include/openssl/x509.h" #line 362 "/usr/include/openssl/x509.h" #line 410 "/usr/include/openssl/x509.h" typedef struct X509_revoked_st { ASN1_INTEGER *serialNumber; ASN1_TIME *revocationDate; STACK *extensions; int sequence; } X509_REVOKED; typedef struct X509_crl_info_st { ASN1_INTEGER *version; X509_ALGOR *sig_alg; X509_NAME *issuer; ASN1_TIME *lastUpdate; ASN1_TIME *nextUpdate; STACK *revoked; STACK *extensions; ASN1_ENCODING enc; } X509_CRL_INFO; struct X509_crl_st { X509_CRL_INFO *crl; X509_ALGOR *sig_alg; ASN1_BIT_STRING *signature; int references; } ; typedef struct private_key_st { int version; X509_ALGOR *enc_algor; ASN1_OCTET_STRING *enc_pkey; EVP_PKEY *dec_pkey; int key_length; char *key_data; int key_free; EVP_CIPHER_INFO cipher; int references; } X509_PKEY; typedef struct X509_info_st { X509 *x509; X509_CRL *crl; X509_PKEY *x_pkey; EVP_CIPHER_INFO enc_cipher; int enc_len; char *enc_data; int references; } X509_INFO; typedef struct Netscape_spkac_st { X509_PUBKEY *pubkey; ASN1_IA5STRING *challenge; } NETSCAPE_SPKAC; typedef struct Netscape_spki_st { NETSCAPE_SPKAC *spkac; X509_ALGOR *sig_algor; ASN1_BIT_STRING *signature; } NETSCAPE_SPKI; typedef struct Netscape_certificate_sequence { ASN1_OBJECT *type; STACK *certs; } NETSCAPE_CERT_SEQUENCE; typedef struct PBEPARAM_st { ASN1_OCTET_STRING *salt; ASN1_INTEGER *iter; } PBEPARAM; typedef struct PBE2PARAM_st { X509_ALGOR *keyfunc; X509_ALGOR *encryption; } PBE2PARAM; typedef struct PBKDF2PARAM_st { ASN1_TYPE *salt; ASN1_INTEGER *iter; ASN1_INTEGER *keylength; X509_ALGOR *prf; } PBKDF2PARAM; typedef struct pkcs8_priv_key_info_st { int broken; ASN1_INTEGER *version; X509_ALGOR *pkeyalg; ASN1_TYPE *pkey; STACK *attributes; } PKCS8_PRIV_KEY_INFO; #line 1 "/usr/include/openssl/x509_vfy.h" #line 66 "/usr/include/openssl/x509_vfy.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 71 "/usr/include/openssl/x509_vfy.h" #line 1 "/usr/include/openssl/lhash.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 67 "/usr/include/openssl/lhash.h" typedef struct lhash_node_st { void *data; struct lhash_node_st *next; unsigned long hash; } LHASH_NODE; typedef int (*LHASH_COMP_FN_TYPE) (const void *, const void *); typedef unsigned long (*LHASH_HASH_FN_TYPE) (const void *); typedef void (*LHASH_DOALL_FN_TYPE) (void *); typedef void (*LHASH_DOALL_ARG_FN_TYPE) (void *, void *); #line 109 "/usr/include/openssl/lhash.h" #line 119 "/usr/include/openssl/lhash.h" #line 128 "/usr/include/openssl/lhash.h" #line 138 "/usr/include/openssl/lhash.h" typedef struct lhash_st { LHASH_NODE **b; LHASH_COMP_FN_TYPE comp; LHASH_HASH_FN_TYPE hash; unsigned int num_nodes; unsigned int num_alloc_nodes; unsigned int p; unsigned int pmax; unsigned long up_load; unsigned long down_load; unsigned long num_items; unsigned long num_expands; unsigned long num_expand_reallocs; unsigned long num_contracts; unsigned long num_contract_reallocs; unsigned long num_hash_calls; unsigned long num_comp_calls; unsigned long num_insert; unsigned long num_replace; unsigned long num_delete; unsigned long num_no_delete; unsigned long num_retrieve; unsigned long num_retrieve_miss; unsigned long num_hash_comps; int error; } LHASH; LHASH *lh_new(LHASH_HASH_FN_TYPE h, LHASH_COMP_FN_TYPE c); void lh_free(LHASH *lh); void *lh_insert(LHASH *lh, void *data); void *lh_delete(LHASH *lh, const void *data); void *lh_retrieve(LHASH *lh, const void *data); void lh_doall(LHASH *lh, LHASH_DOALL_FN_TYPE func); void lh_doall_arg(LHASH *lh, LHASH_DOALL_ARG_FN_TYPE func, void *arg); unsigned long lh_strhash(const char *c); unsigned long lh_num_items(const LHASH *lh); void lh_stats(const LHASH *lh, FILE *out); void lh_node_stats(const LHASH *lh, FILE *out); void lh_node_usage_stats(const LHASH *lh, FILE *out); void lh_stats_bio(const LHASH *lh, BIO *out); void lh_node_stats_bio(const LHASH *lh, BIO *out); void lh_node_usage_stats_bio(const LHASH *lh, BIO *out); #line 73 "/usr/include/openssl/x509_vfy.h" #line 1 "/usr/include/openssl/symhacks.h" #line 436 "/usr/include/openssl/symhacks.h" #line 77 "/usr/include/openssl/x509_vfy.h" typedef struct x509_hash_dir_st { int num_dirs; char **dirs; int *dirs_type; int num_dirs_alloced; } X509_HASH_DIR_CTX; typedef struct x509_file_st { int num_paths; int num_alloced; char **paths; int *path_type; } X509_CERT_FILE_CTX; typedef struct x509_object_st { int type; union { char *ptr; X509 *x509; X509_CRL *crl; EVP_PKEY *pkey; } data; } X509_OBJECT; typedef struct x509_lookup_st X509_LOOKUP; typedef struct x509_lookup_method_st { const char *name; int (*new_item) (X509_LOOKUP *ctx); void (*free) (X509_LOOKUP *ctx); int (*init) (X509_LOOKUP *ctx); int (*shutdown) (X509_LOOKUP *ctx); int (*ctrl) (X509_LOOKUP *ctx, int cmd, const char *argc, long argl, char **ret); int (*get_by_subject) (X509_LOOKUP *ctx, int type, X509_NAME *name, X509_OBJECT *ret); int (*get_by_issuer_serial) (X509_LOOKUP *ctx, int type, X509_NAME *name, ASN1_INTEGER *serial, X509_OBJECT *ret); int (*get_by_fingerprint) (X509_LOOKUP *ctx, int type, unsigned char *bytes, int len, X509_OBJECT *ret); int (*get_by_alias) (X509_LOOKUP *ctx, int type, char *str, int len, X509_OBJECT *ret); } X509_LOOKUP_METHOD; typedef struct X509_VERIFY_PARAM_st { char *name; time_t check_time; unsigned long inh_flags; unsigned long flags; int purpose; int trust; int depth; STACK *policies; } X509_VERIFY_PARAM; struct x509_store_st { int cache; STACK *objs; STACK *get_cert_methods; X509_VERIFY_PARAM *param; int (*verify) (X509_STORE_CTX *ctx); int (*verify_cb) (int ok, X509_STORE_CTX *ctx); int (*get_issuer) (X509 **issuer, X509_STORE_CTX *ctx, X509 *x); int (*check_issued) (X509_STORE_CTX *ctx, X509 *x, X509 *issuer); int (*check_revocation) (X509_STORE_CTX *ctx); int (*get_crl) (X509_STORE_CTX *ctx, X509_CRL **crl, X509 *x); int (*check_crl) (X509_STORE_CTX *ctx, X509_CRL *crl); int (*cert_crl) (X509_STORE_CTX *ctx, X509_CRL *crl, X509 *x); int (*cleanup) (X509_STORE_CTX *ctx); CRYPTO_EX_DATA ex_data; int references; } ; int X509_STORE_set_depth(X509_STORE *store, int depth); struct x509_lookup_st { int init; int skip; X509_LOOKUP_METHOD *method; char *method_data; X509_STORE *store_ctx; } ; struct x509_store_ctx_st { X509_STORE *ctx; int current_method; X509 *cert; STACK *untrusted; STACK *crls; X509_VERIFY_PARAM *param; void *other_ctx; int (*verify) (X509_STORE_CTX *ctx); int (*verify_cb) (int ok, X509_STORE_CTX *ctx); int (*get_issuer) (X509 **issuer, X509_STORE_CTX *ctx, X509 *x); int (*check_issued) (X509_STORE_CTX *ctx, X509 *x, X509 *issuer); int (*check_revocation) (X509_STORE_CTX *ctx); int (*get_crl) (X509_STORE_CTX *ctx, X509_CRL **crl, X509 *x); int (*check_crl) (X509_STORE_CTX *ctx, X509_CRL *crl); int (*cert_crl) (X509_STORE_CTX *ctx, X509_CRL *crl, X509 *x); int (*check_policy) (X509_STORE_CTX *ctx); int (*cleanup) (X509_STORE_CTX *ctx); int valid; int last_untrusted; STACK *chain; X509_POLICY_TREE *tree; int explicit_policy; int error_depth; int error; X509 *current_cert; X509 *current_issuer; X509_CRL *current_crl; CRYPTO_EX_DATA ex_data; } ; void X509_STORE_CTX_set_depth(X509_STORE_CTX *ctx, int depth); #line 330 "/usr/include/openssl/x509_vfy.h" #line 344 "/usr/include/openssl/x509_vfy.h" int X509_OBJECT_idx_by_subject(STACK *h, int type, X509_NAME *name); X509_OBJECT *X509_OBJECT_retrieve_by_subject(STACK *h, int type, X509_NAME *name); X509_OBJECT *X509_OBJECT_retrieve_match(STACK *h, X509_OBJECT *x); void X509_OBJECT_up_ref_count(X509_OBJECT *a); void X509_OBJECT_free_contents(X509_OBJECT *a); X509_STORE *X509_STORE_new(void); void X509_STORE_free(X509_STORE *v); int X509_STORE_set_flags(X509_STORE *ctx, unsigned long flags); int X509_STORE_set_purpose(X509_STORE *ctx, int purpose); int X509_STORE_set_trust(X509_STORE *ctx, int trust); int X509_STORE_set1_param(X509_STORE *ctx, X509_VERIFY_PARAM *pm); X509_STORE_CTX *X509_STORE_CTX_new(void); int X509_STORE_CTX_get1_issuer(X509 **issuer, X509_STORE_CTX *ctx, X509 *x); void X509_STORE_CTX_free(X509_STORE_CTX *ctx); int X509_STORE_CTX_init(X509_STORE_CTX *ctx, X509_STORE *store, X509 *x509, STACK *chain); void X509_STORE_CTX_trusted_stack(X509_STORE_CTX *ctx, STACK *sk); void X509_STORE_CTX_cleanup(X509_STORE_CTX *ctx); X509_LOOKUP *X509_STORE_add_lookup(X509_STORE *v, X509_LOOKUP_METHOD *m); X509_LOOKUP_METHOD *X509_LOOKUP_hash_dir(void); X509_LOOKUP_METHOD *X509_LOOKUP_file(void); int X509_STORE_add_cert(X509_STORE *ctx, X509 *x); int X509_STORE_add_crl(X509_STORE *ctx, X509_CRL *x); int X509_STORE_get_by_subject(X509_STORE_CTX *vs, int type, X509_NAME *name, X509_OBJECT *ret); int X509_LOOKUP_ctrl(X509_LOOKUP *ctx, int cmd, const char *argc, long argl, char **ret); int X509_load_cert_file(X509_LOOKUP *ctx, const char *file, int type); int X509_load_crl_file(X509_LOOKUP *ctx, const char *file, int type); int X509_load_cert_crl_file(X509_LOOKUP *ctx, const char *file, int type); X509_LOOKUP *X509_LOOKUP_new(X509_LOOKUP_METHOD *method); void X509_LOOKUP_free(X509_LOOKUP *ctx); int X509_LOOKUP_init(X509_LOOKUP *ctx); int X509_LOOKUP_by_subject(X509_LOOKUP *ctx, int type, X509_NAME *name, X509_OBJECT *ret); int X509_LOOKUP_by_issuer_serial(X509_LOOKUP *ctx, int type, X509_NAME *name, ASN1_INTEGER *serial, X509_OBJECT *ret); int X509_LOOKUP_by_fingerprint(X509_LOOKUP *ctx, int type, unsigned char *bytes, int len, X509_OBJECT *ret); int X509_LOOKUP_by_alias(X509_LOOKUP *ctx, int type, char *str, int len, X509_OBJECT *ret); int X509_LOOKUP_shutdown(X509_LOOKUP *ctx); int X509_STORE_load_locations(X509_STORE *ctx, const char *file, const char *dir); int X509_STORE_set_default_paths(X509_STORE *ctx); int X509_STORE_CTX_get_ex_new_index(long argl, void *argp, CRYPTO_EX_new *new_func, CRYPTO_EX_dup *dup_func, CRYPTO_EX_free *free_func); int X509_STORE_CTX_set_ex_data(X509_STORE_CTX *ctx, int idx, void *data); void *X509_STORE_CTX_get_ex_data(X509_STORE_CTX *ctx, int idx); int X509_STORE_CTX_get_error(X509_STORE_CTX *ctx); void X509_STORE_CTX_set_error(X509_STORE_CTX *ctx, int s); int X509_STORE_CTX_get_error_depth(X509_STORE_CTX *ctx); X509 *X509_STORE_CTX_get_current_cert(X509_STORE_CTX *ctx); STACK *X509_STORE_CTX_get_chain(X509_STORE_CTX *ctx); STACK *X509_STORE_CTX_get1_chain(X509_STORE_CTX *ctx); void X509_STORE_CTX_set_cert(X509_STORE_CTX *c, X509 *x); void X509_STORE_CTX_set_chain(X509_STORE_CTX *c, STACK *sk); void X509_STORE_CTX_set0_crls(X509_STORE_CTX *c, STACK *sk); int X509_STORE_CTX_set_purpose(X509_STORE_CTX *ctx, int purpose); int X509_STORE_CTX_set_trust(X509_STORE_CTX *ctx, int trust); int X509_STORE_CTX_purpose_inherit(X509_STORE_CTX *ctx, int def_purpose, int purpose, int trust); void X509_STORE_CTX_set_flags(X509_STORE_CTX *ctx, unsigned long flags); void X509_STORE_CTX_set_time(X509_STORE_CTX *ctx, unsigned long flags, time_t t); void X509_STORE_CTX_set_verify_cb(X509_STORE_CTX *ctx, int (*verify_cb) (int, X509_STORE_CTX *)); X509_POLICY_TREE *X509_STORE_CTX_get0_policy_tree(X509_STORE_CTX *ctx); int X509_STORE_CTX_get_explicit_policy(X509_STORE_CTX *ctx); X509_VERIFY_PARAM *X509_STORE_CTX_get0_param(X509_STORE_CTX *ctx); void X509_STORE_CTX_set0_param(X509_STORE_CTX *ctx, X509_VERIFY_PARAM *param); int X509_STORE_CTX_set_default(X509_STORE_CTX *ctx, const char *name); X509_VERIFY_PARAM *X509_VERIFY_PARAM_new(void); void X509_VERIFY_PARAM_free(X509_VERIFY_PARAM *param); int X509_VERIFY_PARAM_inherit(X509_VERIFY_PARAM *to, const X509_VERIFY_PARAM *from); int X509_VERIFY_PARAM_set1(X509_VERIFY_PARAM *to, const X509_VERIFY_PARAM *from); int X509_VERIFY_PARAM_set1_name(X509_VERIFY_PARAM *param, const char *name); int X509_VERIFY_PARAM_set_flags(X509_VERIFY_PARAM *param, unsigned long flags); int X509_VERIFY_PARAM_clear_flags(X509_VERIFY_PARAM *param, unsigned long flags); unsigned long X509_VERIFY_PARAM_get_flags(X509_VERIFY_PARAM *param); int X509_VERIFY_PARAM_set_purpose(X509_VERIFY_PARAM *param, int purpose); int X509_VERIFY_PARAM_set_trust(X509_VERIFY_PARAM *param, int trust); void X509_VERIFY_PARAM_set_depth(X509_VERIFY_PARAM *param, int depth); void X509_VERIFY_PARAM_set_time(X509_VERIFY_PARAM *param, time_t t); int X509_VERIFY_PARAM_add0_policy(X509_VERIFY_PARAM *param, ASN1_OBJECT *policy); int X509_VERIFY_PARAM_set1_policies(X509_VERIFY_PARAM *param, STACK *policies); int X509_VERIFY_PARAM_get_depth(const X509_VERIFY_PARAM *param); int X509_VERIFY_PARAM_add0_table(X509_VERIFY_PARAM *param); const X509_VERIFY_PARAM *X509_VERIFY_PARAM_lookup(const char *name); void X509_VERIFY_PARAM_table_cleanup(void); int X509_policy_check(X509_POLICY_TREE **ptree, int *pexplicit_policy, STACK *certs, STACK *policy_oids, unsigned int flags); void X509_policy_tree_free(X509_POLICY_TREE *tree); int X509_policy_tree_level_count(const X509_POLICY_TREE *tree); X509_POLICY_LEVEL *X509_policy_tree_get0_level(const X509_POLICY_TREE *tree, int i); STACK *X509_policy_tree_get0_policies(const X509_POLICY_TREE *tree); STACK *X509_policy_tree_get0_user_policies(const X509_POLICY_TREE *tree); int X509_policy_level_node_count(X509_POLICY_LEVEL *level); X509_POLICY_NODE *X509_policy_level_get0_node(X509_POLICY_LEVEL *level, int i); const ASN1_OBJECT *X509_policy_node_get0_policy(const X509_POLICY_NODE *node); STACK *X509_policy_node_get0_qualifiers(const X509_POLICY_NODE *node); const X509_POLICY_NODE *X509_policy_node_get0_parent(const X509_POLICY_NODE *node); #line 545 "/usr/include/openssl/x509.h" #line 1 "/usr/include/openssl/pkcs7.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 65 "/usr/include/openssl/pkcs7.h" #line 1 "/usr/include/openssl/symhacks.h" #line 436 "/usr/include/openssl/symhacks.h" #line 67 "/usr/include/openssl/pkcs7.h" typedef struct pkcs7_issuer_and_serial_st { X509_NAME *issuer; ASN1_INTEGER *serial; } PKCS7_ISSUER_AND_SERIAL; typedef struct pkcs7_signer_info_st { ASN1_INTEGER *version; PKCS7_ISSUER_AND_SERIAL *issuer_and_serial; X509_ALGOR *digest_alg; STACK *auth_attr; X509_ALGOR *digest_enc_alg; ASN1_OCTET_STRING *enc_digest; STACK *unauth_attr; EVP_PKEY *pkey; } PKCS7_SIGNER_INFO; typedef struct pkcs7_recip_info_st { ASN1_INTEGER *version; PKCS7_ISSUER_AND_SERIAL *issuer_and_serial; X509_ALGOR *key_enc_algor; ASN1_OCTET_STRING *enc_key; X509 *cert; } PKCS7_RECIP_INFO; typedef struct pkcs7_signed_st { ASN1_INTEGER *version; STACK *md_algs; STACK *cert; STACK *crl; STACK *signer_info; struct pkcs7_st *contents; } PKCS7_SIGNED; typedef struct pkcs7_enc_content_st { ASN1_OBJECT *content_type; X509_ALGOR *algorithm; ASN1_OCTET_STRING *enc_data; const EVP_CIPHER *cipher; } PKCS7_ENC_CONTENT; typedef struct pkcs7_enveloped_st { ASN1_INTEGER *version; STACK *recipientinfo; PKCS7_ENC_CONTENT *enc_data; } PKCS7_ENVELOPE; typedef struct pkcs7_signedandenveloped_st { ASN1_INTEGER *version; STACK *md_algs; STACK *cert; STACK *crl; STACK *signer_info; PKCS7_ENC_CONTENT *enc_data; STACK *recipientinfo; } PKCS7_SIGN_ENVELOPE; typedef struct pkcs7_digest_st { ASN1_INTEGER *version; X509_ALGOR *md; struct pkcs7_st *contents; ASN1_OCTET_STRING *digest; } PKCS7_DIGEST; typedef struct pkcs7_encrypted_st { ASN1_INTEGER *version; PKCS7_ENC_CONTENT *enc_data; } PKCS7_ENCRYPT; typedef struct pkcs7_st { unsigned char *asn1; long length; int state; int detached; ASN1_OBJECT *type; union { char *ptr; ASN1_OCTET_STRING *data; PKCS7_SIGNED *sign; PKCS7_ENVELOPE *enveloped; PKCS7_SIGN_ENVELOPE *signed_and_enveloped; PKCS7_DIGEST *digest; PKCS7_ENCRYPT *encrypted; ASN1_TYPE *other; } d; } PKCS7; #line 218 "/usr/include/openssl/pkcs7.h" #line 235 "/usr/include/openssl/pkcs7.h" #line 252 "/usr/include/openssl/pkcs7.h" #line 264 "/usr/include/openssl/pkcs7.h" PKCS7_ISSUER_AND_SERIAL *PKCS7_ISSUER_AND_SERIAL_new(void); void PKCS7_ISSUER_AND_SERIAL_free(PKCS7_ISSUER_AND_SERIAL *a); PKCS7_ISSUER_AND_SERIAL *d2i_PKCS7_ISSUER_AND_SERIAL(PKCS7_ISSUER_AND_SERIAL * *a, const unsigned char * *in, long len); int i2d_PKCS7_ISSUER_AND_SERIAL(PKCS7_ISSUER_AND_SERIAL *a, unsigned char * *out); extern const ASN1_ITEM PKCS7_ISSUER_AND_SERIAL_it; int PKCS7_ISSUER_AND_SERIAL_digest(PKCS7_ISSUER_AND_SERIAL *data, const EVP_MD *type, unsigned char *md, unsigned int *len); PKCS7 *d2i_PKCS7_fp(FILE *fp, PKCS7 **p7); int i2d_PKCS7_fp(FILE *fp, PKCS7 *p7); PKCS7 *PKCS7_dup(PKCS7 *p7); PKCS7 *d2i_PKCS7_bio(BIO *bp, PKCS7 **p7); int i2d_PKCS7_bio(BIO *bp, PKCS7 *p7); PKCS7_SIGNER_INFO *PKCS7_SIGNER_INFO_new(void); void PKCS7_SIGNER_INFO_free(PKCS7_SIGNER_INFO *a); PKCS7_SIGNER_INFO *d2i_PKCS7_SIGNER_INFO(PKCS7_SIGNER_INFO * *a, const unsigned char * *in, long len); int i2d_PKCS7_SIGNER_INFO(PKCS7_SIGNER_INFO *a, unsigned char * *out); extern const ASN1_ITEM PKCS7_SIGNER_INFO_it; PKCS7_RECIP_INFO *PKCS7_RECIP_INFO_new(void); void PKCS7_RECIP_INFO_free(PKCS7_RECIP_INFO *a); PKCS7_RECIP_INFO *d2i_PKCS7_RECIP_INFO(PKCS7_RECIP_INFO * *a, const unsigned char * *in, long len); int i2d_PKCS7_RECIP_INFO(PKCS7_RECIP_INFO *a, unsigned char * *out); extern const ASN1_ITEM PKCS7_RECIP_INFO_it; PKCS7_SIGNED *PKCS7_SIGNED_new(void); void PKCS7_SIGNED_free(PKCS7_SIGNED *a); PKCS7_SIGNED *d2i_PKCS7_SIGNED(PKCS7_SIGNED * *a, const unsigned char * *in, long len); int i2d_PKCS7_SIGNED(PKCS7_SIGNED *a, unsigned char * *out); extern const ASN1_ITEM PKCS7_SIGNED_it; PKCS7_ENC_CONTENT *PKCS7_ENC_CONTENT_new(void); void PKCS7_ENC_CONTENT_free(PKCS7_ENC_CONTENT *a); PKCS7_ENC_CONTENT *d2i_PKCS7_ENC_CONTENT(PKCS7_ENC_CONTENT * *a, const unsigned char * *in, long len); int i2d_PKCS7_ENC_CONTENT(PKCS7_ENC_CONTENT *a, unsigned char * *out); extern const ASN1_ITEM PKCS7_ENC_CONTENT_it; PKCS7_ENVELOPE *PKCS7_ENVELOPE_new(void); void PKCS7_ENVELOPE_free(PKCS7_ENVELOPE *a); PKCS7_ENVELOPE *d2i_PKCS7_ENVELOPE(PKCS7_ENVELOPE * *a, const unsigned char * *in, long len); int i2d_PKCS7_ENVELOPE(PKCS7_ENVELOPE *a, unsigned char * *out); extern const ASN1_ITEM PKCS7_ENVELOPE_it; PKCS7_SIGN_ENVELOPE *PKCS7_SIGN_ENVELOPE_new(void); void PKCS7_SIGN_ENVELOPE_free(PKCS7_SIGN_ENVELOPE *a); PKCS7_SIGN_ENVELOPE *d2i_PKCS7_SIGN_ENVELOPE(PKCS7_SIGN_ENVELOPE * *a, const unsigned char * *in, long len); int i2d_PKCS7_SIGN_ENVELOPE(PKCS7_SIGN_ENVELOPE *a, unsigned char * *out); extern const ASN1_ITEM PKCS7_SIGN_ENVELOPE_it; PKCS7_DIGEST *PKCS7_DIGEST_new(void); void PKCS7_DIGEST_free(PKCS7_DIGEST *a); PKCS7_DIGEST *d2i_PKCS7_DIGEST(PKCS7_DIGEST * *a, const unsigned char * *in, long len); int i2d_PKCS7_DIGEST(PKCS7_DIGEST *a, unsigned char * *out); extern const ASN1_ITEM PKCS7_DIGEST_it; PKCS7_ENCRYPT *PKCS7_ENCRYPT_new(void); void PKCS7_ENCRYPT_free(PKCS7_ENCRYPT *a); PKCS7_ENCRYPT *d2i_PKCS7_ENCRYPT(PKCS7_ENCRYPT * *a, const unsigned char * *in, long len); int i2d_PKCS7_ENCRYPT(PKCS7_ENCRYPT *a, unsigned char * *out); extern const ASN1_ITEM PKCS7_ENCRYPT_it; PKCS7 *PKCS7_new(void); void PKCS7_free(PKCS7 *a); PKCS7 *d2i_PKCS7(PKCS7 * *a, const unsigned char * *in, long len); int i2d_PKCS7(PKCS7 *a, unsigned char * *out); extern const ASN1_ITEM PKCS7_it; extern const ASN1_ITEM PKCS7_ATTR_SIGN_it; extern const ASN1_ITEM PKCS7_ATTR_VERIFY_it; int i2d_PKCS7_NDEF(PKCS7 *a, unsigned char * *out); long PKCS7_ctrl(PKCS7 *p7, int cmd, long larg, char *parg); int PKCS7_set_type(PKCS7 *p7, int type); int PKCS7_set0_type_other(PKCS7 *p7, int type, ASN1_TYPE *other); int PKCS7_set_content(PKCS7 *p7, PKCS7 *p7_data); int PKCS7_SIGNER_INFO_set(PKCS7_SIGNER_INFO *p7i, X509 *x509, EVP_PKEY *pkey, const EVP_MD *dgst); int PKCS7_add_signer(PKCS7 *p7, PKCS7_SIGNER_INFO *p7i); int PKCS7_add_certificate(PKCS7 *p7, X509 *x509); int PKCS7_add_crl(PKCS7 *p7, X509_CRL *x509); int PKCS7_content_new(PKCS7 *p7, int nid); int PKCS7_dataVerify(X509_STORE *cert_store, X509_STORE_CTX *ctx, BIO *bio, PKCS7 *p7, PKCS7_SIGNER_INFO *si); int PKCS7_signatureVerify(BIO *bio, PKCS7 *p7, PKCS7_SIGNER_INFO *si, X509 *x509); BIO *PKCS7_dataInit(PKCS7 *p7, BIO *bio); int PKCS7_dataFinal(PKCS7 *p7, BIO *bio); BIO *PKCS7_dataDecode(PKCS7 *p7, EVP_PKEY *pkey, BIO *in_bio, X509 *pcert); PKCS7_SIGNER_INFO *PKCS7_add_signature(PKCS7 *p7, X509 *x509, EVP_PKEY *pkey, const EVP_MD *dgst); X509 *PKCS7_cert_from_signer_info(PKCS7 *p7, PKCS7_SIGNER_INFO *si); int PKCS7_set_digest(PKCS7 *p7, const EVP_MD *md); STACK *PKCS7_get_signer_info(PKCS7 *p7); PKCS7_RECIP_INFO *PKCS7_add_recipient(PKCS7 *p7, X509 *x509); int PKCS7_add_recipient_info(PKCS7 *p7, PKCS7_RECIP_INFO *ri); int PKCS7_RECIP_INFO_set(PKCS7_RECIP_INFO *p7i, X509 *x509); int PKCS7_set_cipher(PKCS7 *p7, const EVP_CIPHER *cipher); PKCS7_ISSUER_AND_SERIAL *PKCS7_get_issuer_and_serial(PKCS7 *p7, int idx); ASN1_OCTET_STRING *PKCS7_digest_from_attributes(STACK *sk); int PKCS7_add_signed_attribute(PKCS7_SIGNER_INFO *p7si, int nid, int type, void *data); int PKCS7_add_attribute(PKCS7_SIGNER_INFO *p7si, int nid, int atrtype, void *value); ASN1_TYPE *PKCS7_get_attribute(PKCS7_SIGNER_INFO *si, int nid); ASN1_TYPE *PKCS7_get_signed_attribute(PKCS7_SIGNER_INFO *si, int nid); int PKCS7_set_signed_attributes(PKCS7_SIGNER_INFO *p7si, STACK *sk); int PKCS7_set_attributes(PKCS7_SIGNER_INFO *p7si, STACK *sk); PKCS7 *PKCS7_sign(X509 *signcert, EVP_PKEY *pkey, STACK *certs, BIO *data, int flags); int PKCS7_verify(PKCS7 *p7, STACK *certs, X509_STORE *store, BIO *indata, BIO *out, int flags); STACK *PKCS7_get0_signers(PKCS7 *p7, STACK *certs, int flags); PKCS7 *PKCS7_encrypt(STACK *certs, BIO *in, const EVP_CIPHER *cipher, int flags); int PKCS7_decrypt(PKCS7 *p7, EVP_PKEY *pkey, X509 *cert, BIO *data, int flags); int PKCS7_add_attrib_smimecap(PKCS7_SIGNER_INFO *si, STACK *cap); STACK *PKCS7_get_smimecap(PKCS7_SIGNER_INFO *si); int PKCS7_simple_smimecap(STACK *sk, int nid, int arg); int SMIME_write_PKCS7(BIO *bio, PKCS7 *p7, BIO *data, int flags); PKCS7 *SMIME_read_PKCS7(BIO *bio, BIO **bcont); int SMIME_crlf_copy(BIO *in, BIO *out, int flags); int SMIME_text(BIO *in, BIO *out); void ERR_load_PKCS7_strings(void); #line 398 "/usr/include/openssl/pkcs7.h" #line 446 "/usr/include/openssl/pkcs7.h" #line 546 "/usr/include/openssl/x509.h" #line 695 "/usr/include/openssl/x509.h" #line 709 "/usr/include/openssl/x509.h" const char *X509_verify_cert_error_string(long n); int X509_verify(X509 *a, EVP_PKEY *r); int X509_REQ_verify(X509_REQ *a, EVP_PKEY *r); int X509_CRL_verify(X509_CRL *a, EVP_PKEY *r); int NETSCAPE_SPKI_verify(NETSCAPE_SPKI *a, EVP_PKEY *r); NETSCAPE_SPKI *NETSCAPE_SPKI_b64_decode(const char *str, int len); char *NETSCAPE_SPKI_b64_encode(NETSCAPE_SPKI *x); EVP_PKEY *NETSCAPE_SPKI_get_pubkey(NETSCAPE_SPKI *x); int NETSCAPE_SPKI_set_pubkey(NETSCAPE_SPKI *x, EVP_PKEY *pkey); int NETSCAPE_SPKI_print(BIO *out, NETSCAPE_SPKI *spki); int X509_signature_print(BIO *bp, X509_ALGOR *alg, ASN1_STRING *sig); int X509_sign(X509 *x, EVP_PKEY *pkey, const EVP_MD *md); int X509_REQ_sign(X509_REQ *x, EVP_PKEY *pkey, const EVP_MD *md); int X509_CRL_sign(X509_CRL *x, EVP_PKEY *pkey, const EVP_MD *md); int NETSCAPE_SPKI_sign(NETSCAPE_SPKI *x, EVP_PKEY *pkey, const EVP_MD *md); int X509_pubkey_digest(const X509 *data, const EVP_MD *type, unsigned char *md, unsigned int *len); int X509_digest(const X509 *data, const EVP_MD *type, unsigned char *md, unsigned int *len); int X509_CRL_digest(const X509_CRL *data, const EVP_MD *type, unsigned char *md, unsigned int *len); int X509_REQ_digest(const X509_REQ *data, const EVP_MD *type, unsigned char *md, unsigned int *len); int X509_NAME_digest(const X509_NAME *data, const EVP_MD *type, unsigned char *md, unsigned int *len); X509 *d2i_X509_fp(FILE *fp, X509 **x509); int i2d_X509_fp(FILE *fp, X509 *x509); X509_CRL *d2i_X509_CRL_fp(FILE *fp, X509_CRL **crl); int i2d_X509_CRL_fp(FILE *fp, X509_CRL *crl); X509_REQ *d2i_X509_REQ_fp(FILE *fp, X509_REQ **req); int i2d_X509_REQ_fp(FILE *fp, X509_REQ *req); RSA *d2i_RSAPrivateKey_fp(FILE *fp, RSA **rsa); int i2d_RSAPrivateKey_fp(FILE *fp, RSA *rsa); RSA *d2i_RSAPublicKey_fp(FILE *fp, RSA **rsa); int i2d_RSAPublicKey_fp(FILE *fp, RSA *rsa); RSA *d2i_RSA_PUBKEY_fp(FILE *fp, RSA **rsa); int i2d_RSA_PUBKEY_fp(FILE *fp, RSA *rsa); DSA *d2i_DSA_PUBKEY_fp(FILE *fp, DSA **dsa); int i2d_DSA_PUBKEY_fp(FILE *fp, DSA *dsa); DSA *d2i_DSAPrivateKey_fp(FILE *fp, DSA **dsa); int i2d_DSAPrivateKey_fp(FILE *fp, DSA *dsa); X509_SIG *d2i_PKCS8_fp(FILE *fp, X509_SIG **p8); int i2d_PKCS8_fp(FILE *fp, X509_SIG *p8); PKCS8_PRIV_KEY_INFO *d2i_PKCS8_PRIV_KEY_INFO_fp(FILE *fp, PKCS8_PRIV_KEY_INFO **p8inf); int i2d_PKCS8_PRIV_KEY_INFO_fp(FILE *fp, PKCS8_PRIV_KEY_INFO *p8inf); int i2d_PKCS8PrivateKeyInfo_fp(FILE *fp, EVP_PKEY *key); int i2d_PrivateKey_fp(FILE *fp, EVP_PKEY *pkey); EVP_PKEY *d2i_PrivateKey_fp(FILE *fp, EVP_PKEY **a); int i2d_PUBKEY_fp(FILE *fp, EVP_PKEY *pkey); EVP_PKEY *d2i_PUBKEY_fp(FILE *fp, EVP_PKEY **a); X509 *d2i_X509_bio(BIO *bp, X509 **x509); int i2d_X509_bio(BIO *bp, X509 *x509); X509_CRL *d2i_X509_CRL_bio(BIO *bp, X509_CRL **crl); int i2d_X509_CRL_bio(BIO *bp, X509_CRL *crl); X509_REQ *d2i_X509_REQ_bio(BIO *bp, X509_REQ **req); int i2d_X509_REQ_bio(BIO *bp, X509_REQ *req); RSA *d2i_RSAPrivateKey_bio(BIO *bp, RSA **rsa); int i2d_RSAPrivateKey_bio(BIO *bp, RSA *rsa); RSA *d2i_RSAPublicKey_bio(BIO *bp, RSA **rsa); int i2d_RSAPublicKey_bio(BIO *bp, RSA *rsa); RSA *d2i_RSA_PUBKEY_bio(BIO *bp, RSA **rsa); int i2d_RSA_PUBKEY_bio(BIO *bp, RSA *rsa); DSA *d2i_DSA_PUBKEY_bio(BIO *bp, DSA **dsa); int i2d_DSA_PUBKEY_bio(BIO *bp, DSA *dsa); DSA *d2i_DSAPrivateKey_bio(BIO *bp, DSA **dsa); int i2d_DSAPrivateKey_bio(BIO *bp, DSA *dsa); X509_SIG *d2i_PKCS8_bio(BIO *bp, X509_SIG **p8); int i2d_PKCS8_bio(BIO *bp, X509_SIG *p8); PKCS8_PRIV_KEY_INFO *d2i_PKCS8_PRIV_KEY_INFO_bio(BIO *bp, PKCS8_PRIV_KEY_INFO **p8inf); int i2d_PKCS8_PRIV_KEY_INFO_bio(BIO *bp, PKCS8_PRIV_KEY_INFO *p8inf); int i2d_PKCS8PrivateKeyInfo_bio(BIO *bp, EVP_PKEY *key); int i2d_PrivateKey_bio(BIO *bp, EVP_PKEY *pkey); EVP_PKEY *d2i_PrivateKey_bio(BIO *bp, EVP_PKEY **a); int i2d_PUBKEY_bio(BIO *bp, EVP_PKEY *pkey); EVP_PKEY *d2i_PUBKEY_bio(BIO *bp, EVP_PKEY **a); X509 *X509_dup(X509 *x509); X509_ATTRIBUTE *X509_ATTRIBUTE_dup(X509_ATTRIBUTE *xa); X509_EXTENSION *X509_EXTENSION_dup(X509_EXTENSION *ex); X509_CRL *X509_CRL_dup(X509_CRL *crl); X509_REQ *X509_REQ_dup(X509_REQ *req); X509_ALGOR *X509_ALGOR_dup(X509_ALGOR *xn); int X509_ALGOR_set0(X509_ALGOR *alg, ASN1_OBJECT *aobj, int ptype, void *pval); void X509_ALGOR_get0(ASN1_OBJECT **paobj, int *pptype, void **ppval, X509_ALGOR *algor); int X509_ALGOR_cmp(const X509_ALGOR *a, const X509_ALGOR *b); X509_NAME *X509_NAME_dup(X509_NAME *xn); X509_NAME_ENTRY *X509_NAME_ENTRY_dup(X509_NAME_ENTRY *ne); int X509_cmp_time(ASN1_TIME *s, time_t *t); int X509_cmp_current_time(ASN1_TIME *s); ASN1_TIME *X509_time_adj(ASN1_TIME *s, long adj, time_t *t); ASN1_TIME *X509_gmtime_adj(ASN1_TIME *s, long adj); const char *X509_get_default_cert_area(void); const char *X509_get_default_cert_dir(void); const char *X509_get_default_cert_file(void); const char *X509_get_default_cert_dir_env(void); const char *X509_get_default_cert_file_env(void); const char *X509_get_default_private_dir(void); X509_REQ *X509_to_X509_REQ(X509 *x, EVP_PKEY *pkey, const EVP_MD *md); X509 *X509_REQ_to_X509(X509_REQ *r, int days, EVP_PKEY *pkey); X509_ALGOR *X509_ALGOR_new(void); void X509_ALGOR_free(X509_ALGOR *a); X509_ALGOR *d2i_X509_ALGOR(X509_ALGOR * *a, const unsigned char * *in, long len); int i2d_X509_ALGOR(X509_ALGOR *a, unsigned char * *out); extern const ASN1_ITEM X509_ALGOR_it; X509_ALGORS *d2i_X509_ALGORS(X509_ALGORS * *a, const unsigned char * *in, long len); int i2d_X509_ALGORS(X509_ALGORS *a, unsigned char * *out); extern const ASN1_ITEM X509_ALGORS_it; X509_VAL *X509_VAL_new(void); void X509_VAL_free(X509_VAL *a); X509_VAL *d2i_X509_VAL(X509_VAL * *a, const unsigned char * *in, long len); int i2d_X509_VAL(X509_VAL *a, unsigned char * *out); extern const ASN1_ITEM X509_VAL_it; X509_PUBKEY *X509_PUBKEY_new(void); void X509_PUBKEY_free(X509_PUBKEY *a); X509_PUBKEY *d2i_X509_PUBKEY(X509_PUBKEY * *a, const unsigned char * *in, long len); int i2d_X509_PUBKEY(X509_PUBKEY *a, unsigned char * *out); extern const ASN1_ITEM X509_PUBKEY_it; int X509_PUBKEY_set(X509_PUBKEY **x, EVP_PKEY *pkey); EVP_PKEY *X509_PUBKEY_get(X509_PUBKEY *key); int X509_get_pubkey_parameters(EVP_PKEY *pkey, STACK *chain); int i2d_PUBKEY(EVP_PKEY *a, unsigned char **pp); EVP_PKEY *d2i_PUBKEY(EVP_PKEY **a, const unsigned char **pp, long length); int i2d_RSA_PUBKEY(RSA *a, unsigned char **pp); RSA *d2i_RSA_PUBKEY(RSA **a, const unsigned char **pp, long length); int i2d_DSA_PUBKEY(DSA *a, unsigned char **pp); DSA *d2i_DSA_PUBKEY(DSA **a, const unsigned char **pp, long length); X509_SIG *X509_SIG_new(void); void X509_SIG_free(X509_SIG *a); X509_SIG *d2i_X509_SIG(X509_SIG * *a, const unsigned char * *in, long len); int i2d_X509_SIG(X509_SIG *a, unsigned char * *out); extern const ASN1_ITEM X509_SIG_it; X509_REQ_INFO *X509_REQ_INFO_new(void); void X509_REQ_INFO_free(X509_REQ_INFO *a); X509_REQ_INFO *d2i_X509_REQ_INFO(X509_REQ_INFO * *a, const unsigned char * *in, long len); int i2d_X509_REQ_INFO(X509_REQ_INFO *a, unsigned char * *out); extern const ASN1_ITEM X509_REQ_INFO_it; X509_REQ *X509_REQ_new(void); void X509_REQ_free(X509_REQ *a); X509_REQ *d2i_X509_REQ(X509_REQ * *a, const unsigned char * *in, long len); int i2d_X509_REQ(X509_REQ *a, unsigned char * *out); extern const ASN1_ITEM X509_REQ_it; X509_ATTRIBUTE *X509_ATTRIBUTE_new(void); void X509_ATTRIBUTE_free(X509_ATTRIBUTE *a); X509_ATTRIBUTE *d2i_X509_ATTRIBUTE(X509_ATTRIBUTE * *a, const unsigned char * *in, long len); int i2d_X509_ATTRIBUTE(X509_ATTRIBUTE *a, unsigned char * *out); extern const ASN1_ITEM X509_ATTRIBUTE_it; X509_ATTRIBUTE *X509_ATTRIBUTE_create(int nid, int atrtype, void *value); X509_EXTENSION *X509_EXTENSION_new(void); void X509_EXTENSION_free(X509_EXTENSION *a); X509_EXTENSION *d2i_X509_EXTENSION(X509_EXTENSION * *a, const unsigned char * *in, long len); int i2d_X509_EXTENSION(X509_EXTENSION *a, unsigned char * *out); extern const ASN1_ITEM X509_EXTENSION_it; X509_EXTENSIONS *d2i_X509_EXTENSIONS(X509_EXTENSIONS * *a, const unsigned char * *in, long len); int i2d_X509_EXTENSIONS(X509_EXTENSIONS *a, unsigned char * *out); extern const ASN1_ITEM X509_EXTENSIONS_it; X509_NAME_ENTRY *X509_NAME_ENTRY_new(void); void X509_NAME_ENTRY_free(X509_NAME_ENTRY *a); X509_NAME_ENTRY *d2i_X509_NAME_ENTRY(X509_NAME_ENTRY * *a, const unsigned char * *in, long len); int i2d_X509_NAME_ENTRY(X509_NAME_ENTRY *a, unsigned char * *out); extern const ASN1_ITEM X509_NAME_ENTRY_it; X509_NAME *X509_NAME_new(void); void X509_NAME_free(X509_NAME *a); X509_NAME *d2i_X509_NAME(X509_NAME * *a, const unsigned char * *in, long len); int i2d_X509_NAME(X509_NAME *a, unsigned char * *out); extern const ASN1_ITEM X509_NAME_it; int X509_NAME_set(X509_NAME **xn, X509_NAME *name); X509_CINF *X509_CINF_new(void); void X509_CINF_free(X509_CINF *a); X509_CINF *d2i_X509_CINF(X509_CINF * *a, const unsigned char * *in, long len); int i2d_X509_CINF(X509_CINF *a, unsigned char * *out); extern const ASN1_ITEM X509_CINF_it; X509 *X509_new(void); void X509_free(X509 *a); X509 *d2i_X509(X509 * *a, const unsigned char * *in, long len); int i2d_X509(X509 *a, unsigned char * *out); extern const ASN1_ITEM X509_it; X509_CERT_AUX *X509_CERT_AUX_new(void); void X509_CERT_AUX_free(X509_CERT_AUX *a); X509_CERT_AUX *d2i_X509_CERT_AUX(X509_CERT_AUX * *a, const unsigned char * *in, long len); int i2d_X509_CERT_AUX(X509_CERT_AUX *a, unsigned char * *out); extern const ASN1_ITEM X509_CERT_AUX_it; X509_CERT_PAIR *X509_CERT_PAIR_new(void); void X509_CERT_PAIR_free(X509_CERT_PAIR *a); X509_CERT_PAIR *d2i_X509_CERT_PAIR(X509_CERT_PAIR * *a, const unsigned char * *in, long len); int i2d_X509_CERT_PAIR(X509_CERT_PAIR *a, unsigned char * *out); extern const ASN1_ITEM X509_CERT_PAIR_it; int X509_get_ex_new_index(long argl, void *argp, CRYPTO_EX_new *new_func, CRYPTO_EX_dup *dup_func, CRYPTO_EX_free *free_func); int X509_set_ex_data(X509 *r, int idx, void *arg); void *X509_get_ex_data(X509 *r, int idx); int i2d_X509_AUX(X509 *a, unsigned char **pp); X509 *d2i_X509_AUX(X509 **a, const unsigned char **pp, long length); int X509_alias_set1(X509 *x, unsigned char *name, int len); int X509_keyid_set1(X509 *x, unsigned char *id, int len); unsigned char *X509_alias_get0(X509 *x, int *len); unsigned char *X509_keyid_get0(X509 *x, int *len); int (*X509_TRUST_set_default(int (*trust) (int, X509 *, int))) (int, X509 *, int); int X509_TRUST_set(int *t, int trust); int X509_add1_trust_object(X509 *x, ASN1_OBJECT *obj); int X509_add1_reject_object(X509 *x, ASN1_OBJECT *obj); void X509_trust_clear(X509 *x); void X509_reject_clear(X509 *x); X509_REVOKED *X509_REVOKED_new(void); void X509_REVOKED_free(X509_REVOKED *a); X509_REVOKED *d2i_X509_REVOKED(X509_REVOKED * *a, const unsigned char * *in, long len); int i2d_X509_REVOKED(X509_REVOKED *a, unsigned char * *out); extern const ASN1_ITEM X509_REVOKED_it; X509_CRL_INFO *X509_CRL_INFO_new(void); void X509_CRL_INFO_free(X509_CRL_INFO *a); X509_CRL_INFO *d2i_X509_CRL_INFO(X509_CRL_INFO * *a, const unsigned char * *in, long len); int i2d_X509_CRL_INFO(X509_CRL_INFO *a, unsigned char * *out); extern const ASN1_ITEM X509_CRL_INFO_it; X509_CRL *X509_CRL_new(void); void X509_CRL_free(X509_CRL *a); X509_CRL *d2i_X509_CRL(X509_CRL * *a, const unsigned char * *in, long len); int i2d_X509_CRL(X509_CRL *a, unsigned char * *out); extern const ASN1_ITEM X509_CRL_it; int X509_CRL_add0_revoked(X509_CRL *crl, X509_REVOKED *rev); X509_PKEY *X509_PKEY_new(void); void X509_PKEY_free(X509_PKEY *a); int i2d_X509_PKEY(X509_PKEY *a, unsigned char **pp); X509_PKEY *d2i_X509_PKEY(X509_PKEY **a, const unsigned char **pp, long length); NETSCAPE_SPKI *NETSCAPE_SPKI_new(void); void NETSCAPE_SPKI_free(NETSCAPE_SPKI *a); NETSCAPE_SPKI *d2i_NETSCAPE_SPKI(NETSCAPE_SPKI * *a, const unsigned char * *in, long len); int i2d_NETSCAPE_SPKI(NETSCAPE_SPKI *a, unsigned char * *out); extern const ASN1_ITEM NETSCAPE_SPKI_it; NETSCAPE_SPKAC *NETSCAPE_SPKAC_new(void); void NETSCAPE_SPKAC_free(NETSCAPE_SPKAC *a); NETSCAPE_SPKAC *d2i_NETSCAPE_SPKAC(NETSCAPE_SPKAC * *a, const unsigned char * *in, long len); int i2d_NETSCAPE_SPKAC(NETSCAPE_SPKAC *a, unsigned char * *out); extern const ASN1_ITEM NETSCAPE_SPKAC_it; NETSCAPE_CERT_SEQUENCE *NETSCAPE_CERT_SEQUENCE_new(void); void NETSCAPE_CERT_SEQUENCE_free(NETSCAPE_CERT_SEQUENCE *a); NETSCAPE_CERT_SEQUENCE *d2i_NETSCAPE_CERT_SEQUENCE(NETSCAPE_CERT_SEQUENCE * *a, const unsigned char * *in, long len); int i2d_NETSCAPE_CERT_SEQUENCE(NETSCAPE_CERT_SEQUENCE *a, unsigned char * *out); extern const ASN1_ITEM NETSCAPE_CERT_SEQUENCE_it; X509_INFO *X509_INFO_new(void); void X509_INFO_free(X509_INFO *a); char *X509_NAME_oneline(X509_NAME *a, char *buf, int size); int ASN1_verify(i2d_of_void *i2d, X509_ALGOR *algor1, ASN1_BIT_STRING *signature, char *data, EVP_PKEY *pkey); int ASN1_digest(i2d_of_void *i2d, const EVP_MD *type, char *data, unsigned char *md, unsigned int *len); int ASN1_sign(i2d_of_void *i2d, X509_ALGOR *algor1, X509_ALGOR *algor2, ASN1_BIT_STRING *signature, char *data, EVP_PKEY *pkey, const EVP_MD *type); int ASN1_item_digest(const ASN1_ITEM *it, const EVP_MD *type, void *data, unsigned char *md, unsigned int *len); int ASN1_item_verify(const ASN1_ITEM *it, X509_ALGOR *algor1, ASN1_BIT_STRING *signature, void *data, EVP_PKEY *pkey); int ASN1_item_sign(const ASN1_ITEM *it, X509_ALGOR *algor1, X509_ALGOR *algor2, ASN1_BIT_STRING *signature, void *data, EVP_PKEY *pkey, const EVP_MD *type); int X509_set_version(X509 *x, long version); int X509_set_serialNumber(X509 *x, ASN1_INTEGER *serial); ASN1_INTEGER *X509_get_serialNumber(X509 *x); int X509_set_issuer_name(X509 *x, X509_NAME *name); X509_NAME *X509_get_issuer_name(X509 *a); int X509_set_subject_name(X509 *x, X509_NAME *name); X509_NAME *X509_get_subject_name(X509 *a); int X509_set_notBefore(X509 *x, ASN1_TIME *tm); int X509_set_notAfter(X509 *x, ASN1_TIME *tm); int X509_set_pubkey(X509 *x, EVP_PKEY *pkey); EVP_PKEY *X509_get_pubkey(X509 *x); ASN1_BIT_STRING *X509_get0_pubkey_bitstr(const X509 *x); int X509_certificate_type(X509 *x, EVP_PKEY *pubkey ); int X509_REQ_set_version(X509_REQ *x, long version); int X509_REQ_set_subject_name(X509_REQ *req, X509_NAME *name); int X509_REQ_set_pubkey(X509_REQ *x, EVP_PKEY *pkey); EVP_PKEY *X509_REQ_get_pubkey(X509_REQ *req); int X509_REQ_extension_nid(int nid); int *X509_REQ_get_extension_nids(void); void X509_REQ_set_extension_nids(int *nids); STACK *X509_REQ_get_extensions(X509_REQ *req); int X509_REQ_add_extensions_nid(X509_REQ *req, STACK *exts, int nid); int X509_REQ_add_extensions(X509_REQ *req, STACK *exts); int X509_REQ_get_attr_count(const X509_REQ *req); int X509_REQ_get_attr_by_NID(const X509_REQ *req, int nid, int lastpos); int X509_REQ_get_attr_by_OBJ(const X509_REQ *req, ASN1_OBJECT *obj, int lastpos); X509_ATTRIBUTE *X509_REQ_get_attr(const X509_REQ *req, int loc); X509_ATTRIBUTE *X509_REQ_delete_attr(X509_REQ *req, int loc); int X509_REQ_add1_attr(X509_REQ *req, X509_ATTRIBUTE *attr); int X509_REQ_add1_attr_by_OBJ(X509_REQ *req, const ASN1_OBJECT *obj, int type, const unsigned char *bytes, int len); int X509_REQ_add1_attr_by_NID(X509_REQ *req, int nid, int type, const unsigned char *bytes, int len); int X509_REQ_add1_attr_by_txt(X509_REQ *req, const char *attrname, int type, const unsigned char *bytes, int len); int X509_CRL_set_version(X509_CRL *x, long version); int X509_CRL_set_issuer_name(X509_CRL *x, X509_NAME *name); int X509_CRL_set_lastUpdate(X509_CRL *x, ASN1_TIME *tm); int X509_CRL_set_nextUpdate(X509_CRL *x, ASN1_TIME *tm); int X509_CRL_sort(X509_CRL *crl); int X509_REVOKED_set_serialNumber(X509_REVOKED *x, ASN1_INTEGER *serial); int X509_REVOKED_set_revocationDate(X509_REVOKED *r, ASN1_TIME *tm); int X509_REQ_check_private_key(X509_REQ *x509, EVP_PKEY *pkey); int X509_check_private_key(X509 *x509, EVP_PKEY *pkey); int X509_issuer_and_serial_cmp(const X509 *a, const X509 *b); unsigned long X509_issuer_and_serial_hash(X509 *a); int X509_issuer_name_cmp(const X509 *a, const X509 *b); unsigned long X509_issuer_name_hash(X509 *a); int X509_subject_name_cmp(const X509 *a, const X509 *b); unsigned long X509_subject_name_hash(X509 *x); int X509_cmp(const X509 *a, const X509 *b); int X509_NAME_cmp(const X509_NAME *a, const X509_NAME *b); unsigned long X509_NAME_hash(X509_NAME *x); int X509_CRL_cmp(const X509_CRL *a, const X509_CRL *b); int X509_print_ex_fp(FILE *bp, X509 *x, unsigned long nmflag, unsigned long cflag); int X509_print_fp(FILE *bp, X509 *x); int X509_CRL_print_fp(FILE *bp, X509_CRL *x); int X509_REQ_print_fp(FILE *bp, X509_REQ *req); int X509_NAME_print_ex_fp(FILE *fp, X509_NAME *nm, int indent, unsigned long flags); int X509_NAME_print(BIO *bp, X509_NAME *name, int obase); int X509_NAME_print_ex(BIO *out, X509_NAME *nm, int indent, unsigned long flags); int X509_print_ex(BIO *bp, X509 *x, unsigned long nmflag, unsigned long cflag); int X509_print(BIO *bp, X509 *x); int X509_ocspid_print(BIO *bp, X509 *x); int X509_CERT_AUX_print(BIO *bp, X509_CERT_AUX *x, int indent); int X509_CRL_print(BIO *bp, X509_CRL *x); int X509_REQ_print_ex(BIO *bp, X509_REQ *x, unsigned long nmflag, unsigned long cflag); int X509_REQ_print(BIO *bp, X509_REQ *req); int X509_NAME_entry_count(X509_NAME *name); int X509_NAME_get_text_by_NID(X509_NAME *name, int nid, char *buf, int len); int X509_NAME_get_text_by_OBJ(X509_NAME *name, ASN1_OBJECT *obj, char *buf, int len); int X509_NAME_get_index_by_NID(X509_NAME *name, int nid, int lastpos); int X509_NAME_get_index_by_OBJ(X509_NAME *name, ASN1_OBJECT *obj, int lastpos); X509_NAME_ENTRY *X509_NAME_get_entry(X509_NAME *name, int loc); X509_NAME_ENTRY *X509_NAME_delete_entry(X509_NAME *name, int loc); int X509_NAME_add_entry(X509_NAME *name, X509_NAME_ENTRY *ne, int loc, int set); int X509_NAME_add_entry_by_OBJ(X509_NAME *name, ASN1_OBJECT *obj, int type, unsigned char *bytes, int len, int loc, int set); int X509_NAME_add_entry_by_NID(X509_NAME *name, int nid, int type, unsigned char *bytes, int len, int loc, int set); X509_NAME_ENTRY *X509_NAME_ENTRY_create_by_txt(X509_NAME_ENTRY **ne, const char *field, int type, const unsigned char *bytes, int len); X509_NAME_ENTRY *X509_NAME_ENTRY_create_by_NID(X509_NAME_ENTRY **ne, int nid, int type, unsigned char *bytes, int len); int X509_NAME_add_entry_by_txt(X509_NAME *name, const char *field, int type, const unsigned char *bytes, int len, int loc, int set); X509_NAME_ENTRY *X509_NAME_ENTRY_create_by_OBJ(X509_NAME_ENTRY **ne, ASN1_OBJECT *obj, int type, const unsigned char *bytes, int len); int X509_NAME_ENTRY_set_object(X509_NAME_ENTRY *ne, ASN1_OBJECT *obj); int X509_NAME_ENTRY_set_data(X509_NAME_ENTRY *ne, int type, const unsigned char *bytes, int len); ASN1_OBJECT *X509_NAME_ENTRY_get_object(X509_NAME_ENTRY *ne); ASN1_STRING *X509_NAME_ENTRY_get_data(X509_NAME_ENTRY *ne); int X509v3_get_ext_count(const STACK *x); int X509v3_get_ext_by_NID(const STACK *x, int nid, int lastpos); int X509v3_get_ext_by_OBJ(const STACK *x, ASN1_OBJECT *obj, int lastpos); int X509v3_get_ext_by_critical(const STACK *x, int crit, int lastpos); X509_EXTENSION *X509v3_get_ext(const STACK *x, int loc); X509_EXTENSION *X509v3_delete_ext(STACK *x, int loc); STACK *X509v3_add_ext(STACK **x, X509_EXTENSION *ex, int loc); int X509_get_ext_count(X509 *x); int X509_get_ext_by_NID(X509 *x, int nid, int lastpos); int X509_get_ext_by_OBJ(X509 *x, ASN1_OBJECT *obj, int lastpos); int X509_get_ext_by_critical(X509 *x, int crit, int lastpos); X509_EXTENSION *X509_get_ext(X509 *x, int loc); X509_EXTENSION *X509_delete_ext(X509 *x, int loc); int X509_add_ext(X509 *x, X509_EXTENSION *ex, int loc); void *X509_get_ext_d2i(X509 *x, int nid, int *crit, int *idx); int X509_add1_ext_i2d(X509 *x, int nid, void *value, int crit, unsigned long flags); int X509_CRL_get_ext_count(X509_CRL *x); int X509_CRL_get_ext_by_NID(X509_CRL *x, int nid, int lastpos); int X509_CRL_get_ext_by_OBJ(X509_CRL *x, ASN1_OBJECT *obj, int lastpos); int X509_CRL_get_ext_by_critical(X509_CRL *x, int crit, int lastpos); X509_EXTENSION *X509_CRL_get_ext(X509_CRL *x, int loc); X509_EXTENSION *X509_CRL_delete_ext(X509_CRL *x, int loc); int X509_CRL_add_ext(X509_CRL *x, X509_EXTENSION *ex, int loc); void *X509_CRL_get_ext_d2i(X509_CRL *x, int nid, int *crit, int *idx); int X509_CRL_add1_ext_i2d(X509_CRL *x, int nid, void *value, int crit, unsigned long flags); int X509_REVOKED_get_ext_count(X509_REVOKED *x); int X509_REVOKED_get_ext_by_NID(X509_REVOKED *x, int nid, int lastpos); int X509_REVOKED_get_ext_by_OBJ(X509_REVOKED *x, ASN1_OBJECT *obj, int lastpos); int X509_REVOKED_get_ext_by_critical(X509_REVOKED *x, int crit, int lastpos); X509_EXTENSION *X509_REVOKED_get_ext(X509_REVOKED *x, int loc); X509_EXTENSION *X509_REVOKED_delete_ext(X509_REVOKED *x, int loc); int X509_REVOKED_add_ext(X509_REVOKED *x, X509_EXTENSION *ex, int loc); void *X509_REVOKED_get_ext_d2i(X509_REVOKED *x, int nid, int *crit, int *idx); int X509_REVOKED_add1_ext_i2d(X509_REVOKED *x, int nid, void *value, int crit, unsigned long flags); X509_EXTENSION *X509_EXTENSION_create_by_NID(X509_EXTENSION **ex, int nid, int crit, ASN1_OCTET_STRING *data); X509_EXTENSION *X509_EXTENSION_create_by_OBJ(X509_EXTENSION **ex, ASN1_OBJECT *obj, int crit, ASN1_OCTET_STRING *data); int X509_EXTENSION_set_object(X509_EXTENSION *ex, ASN1_OBJECT *obj); int X509_EXTENSION_set_critical(X509_EXTENSION *ex, int crit); int X509_EXTENSION_set_data(X509_EXTENSION *ex, ASN1_OCTET_STRING *data); ASN1_OBJECT *X509_EXTENSION_get_object(X509_EXTENSION *ex); ASN1_OCTET_STRING *X509_EXTENSION_get_data(X509_EXTENSION *ne); int X509_EXTENSION_get_critical(X509_EXTENSION *ex); int X509at_get_attr_count(const STACK *x); int X509at_get_attr_by_NID(const STACK *x, int nid, int lastpos); int X509at_get_attr_by_OBJ(const STACK *sk, ASN1_OBJECT *obj, int lastpos); X509_ATTRIBUTE *X509at_get_attr(const STACK *x, int loc); X509_ATTRIBUTE *X509at_delete_attr(STACK *x, int loc); STACK *X509at_add1_attr(STACK **x, X509_ATTRIBUTE *attr); STACK *X509at_add1_attr_by_OBJ(STACK **x, const ASN1_OBJECT *obj, int type, const unsigned char *bytes, int len); STACK *X509at_add1_attr_by_NID(STACK **x, int nid, int type, const unsigned char *bytes, int len); STACK *X509at_add1_attr_by_txt(STACK **x, const char *attrname, int type, const unsigned char *bytes, int len); void *X509at_get0_data_by_OBJ(STACK *x, ASN1_OBJECT *obj, int lastpos, int type); X509_ATTRIBUTE *X509_ATTRIBUTE_create_by_NID(X509_ATTRIBUTE **attr, int nid, int atrtype, const void *data, int len); X509_ATTRIBUTE *X509_ATTRIBUTE_create_by_OBJ(X509_ATTRIBUTE **attr, const ASN1_OBJECT *obj, int atrtype, const void *data, int len); X509_ATTRIBUTE *X509_ATTRIBUTE_create_by_txt(X509_ATTRIBUTE **attr, const char *atrname, int type, const unsigned char *bytes, int len); int X509_ATTRIBUTE_set1_object(X509_ATTRIBUTE *attr, const ASN1_OBJECT *obj); int X509_ATTRIBUTE_set1_data(X509_ATTRIBUTE *attr, int attrtype, const void *data, int len); void *X509_ATTRIBUTE_get0_data(X509_ATTRIBUTE *attr, int idx, int atrtype, void *data); int X509_ATTRIBUTE_count(X509_ATTRIBUTE *attr); ASN1_OBJECT *X509_ATTRIBUTE_get0_object(X509_ATTRIBUTE *attr); ASN1_TYPE *X509_ATTRIBUTE_get0_type(X509_ATTRIBUTE *attr, int idx); int EVP_PKEY_get_attr_count(const EVP_PKEY *key); int EVP_PKEY_get_attr_by_NID(const EVP_PKEY *key, int nid, int lastpos); int EVP_PKEY_get_attr_by_OBJ(const EVP_PKEY *key, ASN1_OBJECT *obj, int lastpos); X509_ATTRIBUTE *EVP_PKEY_get_attr(const EVP_PKEY *key, int loc); X509_ATTRIBUTE *EVP_PKEY_delete_attr(EVP_PKEY *key, int loc); int EVP_PKEY_add1_attr(EVP_PKEY *key, X509_ATTRIBUTE *attr); int EVP_PKEY_add1_attr_by_OBJ(EVP_PKEY *key, const ASN1_OBJECT *obj, int type, const unsigned char *bytes, int len); int EVP_PKEY_add1_attr_by_NID(EVP_PKEY *key, int nid, int type, const unsigned char *bytes, int len); int EVP_PKEY_add1_attr_by_txt(EVP_PKEY *key, const char *attrname, int type, const unsigned char *bytes, int len); int X509_verify_cert(X509_STORE_CTX *ctx); X509 *X509_find_by_issuer_and_serial(STACK *sk, X509_NAME *name, ASN1_INTEGER *serial); X509 *X509_find_by_subject(STACK *sk, X509_NAME *name); PBEPARAM *PBEPARAM_new(void); void PBEPARAM_free(PBEPARAM *a); PBEPARAM *d2i_PBEPARAM(PBEPARAM * *a, const unsigned char * *in, long len); int i2d_PBEPARAM(PBEPARAM *a, unsigned char * *out); extern const ASN1_ITEM PBEPARAM_it; PBE2PARAM *PBE2PARAM_new(void); void PBE2PARAM_free(PBE2PARAM *a); PBE2PARAM *d2i_PBE2PARAM(PBE2PARAM * *a, const unsigned char * *in, long len); int i2d_PBE2PARAM(PBE2PARAM *a, unsigned char * *out); extern const ASN1_ITEM PBE2PARAM_it; PBKDF2PARAM *PBKDF2PARAM_new(void); void PBKDF2PARAM_free(PBKDF2PARAM *a); PBKDF2PARAM *d2i_PBKDF2PARAM(PBKDF2PARAM * *a, const unsigned char * *in, long len); int i2d_PBKDF2PARAM(PBKDF2PARAM *a, unsigned char * *out); extern const ASN1_ITEM PBKDF2PARAM_it; X509_ALGOR *PKCS5_pbe_set(int alg, int iter, unsigned char *salt, int saltlen); X509_ALGOR *PKCS5_pbe2_set(const EVP_CIPHER *cipher, int iter, unsigned char *salt, int saltlen); PKCS8_PRIV_KEY_INFO *PKCS8_PRIV_KEY_INFO_new(void); void PKCS8_PRIV_KEY_INFO_free(PKCS8_PRIV_KEY_INFO *a); PKCS8_PRIV_KEY_INFO *d2i_PKCS8_PRIV_KEY_INFO(PKCS8_PRIV_KEY_INFO * *a, const unsigned char * *in, long len); int i2d_PKCS8_PRIV_KEY_INFO(PKCS8_PRIV_KEY_INFO *a, unsigned char * *out); extern const ASN1_ITEM PKCS8_PRIV_KEY_INFO_it; EVP_PKEY *EVP_PKCS82PKEY(PKCS8_PRIV_KEY_INFO *p8); PKCS8_PRIV_KEY_INFO *EVP_PKEY2PKCS8(EVP_PKEY *pkey); PKCS8_PRIV_KEY_INFO *EVP_PKEY2PKCS8_broken(EVP_PKEY *pkey, int broken); PKCS8_PRIV_KEY_INFO *PKCS8_set_broken(PKCS8_PRIV_KEY_INFO *p8, int broken); int X509_check_trust(X509 *x, int id, int flags); int X509_TRUST_get_count(void); X509_TRUST *X509_TRUST_get0(int idx); int X509_TRUST_get_by_id(int id); int X509_TRUST_add(int id, int flags, int (*ck) (X509_TRUST *, X509 *, int), char *name, int arg1, void *arg2); void X509_TRUST_cleanup(void); int X509_TRUST_get_flags(X509_TRUST *xp); char *X509_TRUST_get0_name(X509_TRUST *xp); int X509_TRUST_get_trust(X509_TRUST *xp); void ERR_load_X509_strings(void); #line 1308 "/usr/include/openssl/x509.h" #line 1333 "/usr/include/openssl/x509.h" #line 184 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/pem.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 63 "/usr/include/openssl/pem.h" #line 1 "/usr/include/openssl/pem2.h" #line 72 "/usr/include/openssl/pem.h" #line 97 "/usr/include/openssl/pem.h" #line 106 "/usr/include/openssl/pem.h" #line 113 "/usr/include/openssl/pem.h" #line 138 "/usr/include/openssl/pem.h" typedef struct PEM_Encode_Seal_st { EVP_ENCODE_CTX encode; EVP_MD_CTX md; EVP_CIPHER_CTX cipher; } PEM_ENCODE_SEAL_CTX; typedef struct pem_recip_st { char *name; X509_NAME *dn; int cipher; int key_enc; } PEM_USER; typedef struct pem_ctx_st { int type; struct { int version; int mode; } proc_type; char *domain; struct { int cipher; } DEK_info; PEM_USER *originator; int num_recipient; PEM_USER **recipient; STACK *x509_chain; EVP_MD *md; int md_enc; int md_len; char *md_data; EVP_CIPHER *dec; int key_len; unsigned char *key; int data_enc; int data_len; unsigned char *data; } PEM_CTX; #line 221 "/usr/include/openssl/pem.h" #line 230 "/usr/include/openssl/pem.h" #line 239 "/usr/include/openssl/pem.h" #line 248 "/usr/include/openssl/pem.h" #line 259 "/usr/include/openssl/pem.h" #line 270 "/usr/include/openssl/pem.h" #line 281 "/usr/include/openssl/pem.h" #line 290 "/usr/include/openssl/pem.h" #line 299 "/usr/include/openssl/pem.h" #line 309 "/usr/include/openssl/pem.h" #line 319 "/usr/include/openssl/pem.h" #line 361 "/usr/include/openssl/pem.h" #line 541 "/usr/include/openssl/pem.h" typedef int pem_password_cb (char *buf, int size, int rwflag, void *userdata); int PEM_get_EVP_CIPHER_INFO(char *header, EVP_CIPHER_INFO *cipher); int PEM_do_header(EVP_CIPHER_INFO *cipher, unsigned char *data, long *len, pem_password_cb *callback, void *u); int PEM_read_bio(BIO *bp, char **name, char **header, unsigned char **data, long *len); int PEM_write_bio(BIO *bp, const char *name, char *hdr, unsigned char *data, long len); int PEM_bytes_read_bio(unsigned char **pdata, long *plen, char **pnm, const char *name, BIO *bp, pem_password_cb *cb, void *u); void *PEM_ASN1_read_bio(d2i_of_void *d2i, const char *name, BIO *bp, void **x, pem_password_cb *cb, void *u); int PEM_ASN1_write_bio(i2d_of_void *i2d, const char *name, BIO *bp, char *x, const EVP_CIPHER *enc, unsigned char *kstr, int klen, pem_password_cb *cb, void *u); STACK *PEM_X509_INFO_read_bio(BIO *bp, STACK *sk, pem_password_cb *cb, void *u); int PEM_X509_INFO_write_bio(BIO *bp, X509_INFO *xi, EVP_CIPHER *enc, unsigned char *kstr, int klen, pem_password_cb *cd, void *u); int PEM_read(FILE *fp, char **name, char **header, unsigned char **data, long *len); int PEM_write(FILE *fp, char *name, char *hdr, unsigned char *data, long len); void *PEM_ASN1_read(d2i_of_void *d2i, const char *name, FILE *fp, void **x, pem_password_cb *cb, void *u); int PEM_ASN1_write(i2d_of_void *i2d, const char *name, FILE *fp, char *x, const EVP_CIPHER *enc, unsigned char *kstr, int klen, pem_password_cb *callback, void *u); STACK *PEM_X509_INFO_read(FILE *fp, STACK *sk, pem_password_cb *cb, void *u); int PEM_SealInit(PEM_ENCODE_SEAL_CTX *ctx, EVP_CIPHER *type, EVP_MD *md_type, unsigned char **ek, int *ekl, unsigned char *iv, EVP_PKEY **pubk, int npubk); void PEM_SealUpdate(PEM_ENCODE_SEAL_CTX *ctx, unsigned char *out, int *outl, unsigned char *in, int inl); int PEM_SealFinal(PEM_ENCODE_SEAL_CTX *ctx, unsigned char *sig, int *sigl, unsigned char *out, int *outl, EVP_PKEY *priv); void PEM_SignInit(EVP_MD_CTX *ctx, EVP_MD *type); void PEM_SignUpdate(EVP_MD_CTX *ctx, unsigned char *d, unsigned int cnt); int PEM_SignFinal(EVP_MD_CTX *ctx, unsigned char *sigret, unsigned int *siglen, EVP_PKEY *pkey); int PEM_def_callback(char *buf, int num, int w, void *key); void PEM_proc_type(char *buf, int type); void PEM_dek_info(char *buf, const char *type, int len, char *str); #line 1 "/usr/include/openssl/symhacks.h" #line 436 "/usr/include/openssl/symhacks.h" #line 619 "/usr/include/openssl/pem.h" X509 *PEM_read_bio_X509(BIO *bp, X509 * *x, pem_password_cb *cb, void *u); X509 *PEM_read_X509(FILE *fp, X509 * *x, pem_password_cb *cb, void *u); int PEM_write_bio_X509(BIO *bp, X509 *x); int PEM_write_X509(FILE *fp, X509 *x); X509 *PEM_read_bio_X509_AUX(BIO *bp, X509 * *x, pem_password_cb *cb, void *u); X509 *PEM_read_X509_AUX(FILE *fp, X509 * *x, pem_password_cb *cb, void *u); int PEM_write_bio_X509_AUX(BIO *bp, X509 *x); int PEM_write_X509_AUX(FILE *fp, X509 *x); X509_CERT_PAIR *PEM_read_bio_X509_CERT_PAIR(BIO *bp, X509_CERT_PAIR * *x, pem_password_cb *cb, void *u); X509_CERT_PAIR *PEM_read_X509_CERT_PAIR(FILE *fp, X509_CERT_PAIR * *x, pem_password_cb *cb, void *u); int PEM_write_bio_X509_CERT_PAIR(BIO *bp, X509_CERT_PAIR *x); int PEM_write_X509_CERT_PAIR(FILE *fp, X509_CERT_PAIR *x); X509_REQ *PEM_read_bio_X509_REQ(BIO *bp, X509_REQ * *x, pem_password_cb *cb, void *u); X509_REQ *PEM_read_X509_REQ(FILE *fp, X509_REQ * *x, pem_password_cb *cb, void *u); int PEM_write_bio_X509_REQ(BIO *bp, X509_REQ *x); int PEM_write_X509_REQ(FILE *fp, X509_REQ *x); int PEM_write_bio_X509_REQ_NEW(BIO *bp, X509_REQ *x); int PEM_write_X509_REQ_NEW(FILE *fp, X509_REQ *x); X509_CRL *PEM_read_bio_X509_CRL(BIO *bp, X509_CRL * *x, pem_password_cb *cb, void *u); X509_CRL *PEM_read_X509_CRL(FILE *fp, X509_CRL * *x, pem_password_cb *cb, void *u); int PEM_write_bio_X509_CRL(BIO *bp, X509_CRL *x); int PEM_write_X509_CRL(FILE *fp, X509_CRL *x); PKCS7 *PEM_read_bio_PKCS7(BIO *bp, PKCS7 * *x, pem_password_cb *cb, void *u); PKCS7 *PEM_read_PKCS7(FILE *fp, PKCS7 * *x, pem_password_cb *cb, void *u); int PEM_write_bio_PKCS7(BIO *bp, PKCS7 *x); int PEM_write_PKCS7(FILE *fp, PKCS7 *x); NETSCAPE_CERT_SEQUENCE *PEM_read_bio_NETSCAPE_CERT_SEQUENCE(BIO *bp, NETSCAPE_CERT_SEQUENCE * *x, pem_password_cb *cb, void *u); NETSCAPE_CERT_SEQUENCE *PEM_read_NETSCAPE_CERT_SEQUENCE(FILE *fp, NETSCAPE_CERT_SEQUENCE * *x, pem_password_cb *cb, void *u); int PEM_write_bio_NETSCAPE_CERT_SEQUENCE(BIO *bp, NETSCAPE_CERT_SEQUENCE *x); int PEM_write_NETSCAPE_CERT_SEQUENCE(FILE *fp, NETSCAPE_CERT_SEQUENCE *x); X509_SIG *PEM_read_bio_PKCS8(BIO *bp, X509_SIG * *x, pem_password_cb *cb, void *u); X509_SIG *PEM_read_PKCS8(FILE *fp, X509_SIG * *x, pem_password_cb *cb, void *u); int PEM_write_bio_PKCS8(BIO *bp, X509_SIG *x); int PEM_write_PKCS8(FILE *fp, X509_SIG *x); PKCS8_PRIV_KEY_INFO *PEM_read_bio_PKCS8_PRIV_KEY_INFO(BIO *bp, PKCS8_PRIV_KEY_INFO * *x, pem_password_cb *cb, void *u); PKCS8_PRIV_KEY_INFO *PEM_read_PKCS8_PRIV_KEY_INFO(FILE *fp, PKCS8_PRIV_KEY_INFO * *x, pem_password_cb *cb, void *u); int PEM_write_bio_PKCS8_PRIV_KEY_INFO(BIO *bp, PKCS8_PRIV_KEY_INFO *x); int PEM_write_PKCS8_PRIV_KEY_INFO(FILE *fp, PKCS8_PRIV_KEY_INFO *x); RSA *PEM_read_bio_RSAPrivateKey(BIO *bp, RSA * *x, pem_password_cb *cb, void *u); RSA *PEM_read_RSAPrivateKey(FILE *fp, RSA * *x, pem_password_cb *cb, void *u); int PEM_write_bio_RSAPrivateKey(BIO *bp, RSA *x, const EVP_CIPHER *enc, unsigned char *kstr, int klen, pem_password_cb *cb, void *u); int PEM_write_RSAPrivateKey(FILE *fp, RSA *x, const EVP_CIPHER *enc, unsigned char *kstr, int klen, pem_password_cb *cb, void *u); RSA *PEM_read_bio_RSAPublicKey(BIO *bp, RSA * *x, pem_password_cb *cb, void *u); RSA *PEM_read_RSAPublicKey(FILE *fp, RSA * *x, pem_password_cb *cb, void *u); int PEM_write_bio_RSAPublicKey(BIO *bp, const RSA *x); int PEM_write_RSAPublicKey(FILE *fp, const RSA *x); RSA *PEM_read_bio_RSA_PUBKEY(BIO *bp, RSA * *x, pem_password_cb *cb, void *u); RSA *PEM_read_RSA_PUBKEY(FILE *fp, RSA * *x, pem_password_cb *cb, void *u); int PEM_write_bio_RSA_PUBKEY(BIO *bp, RSA *x); int PEM_write_RSA_PUBKEY(FILE *fp, RSA *x); DSA *PEM_read_bio_DSAPrivateKey(BIO *bp, DSA * *x, pem_password_cb *cb, void *u); DSA *PEM_read_DSAPrivateKey(FILE *fp, DSA * *x, pem_password_cb *cb, void *u); int PEM_write_bio_DSAPrivateKey(BIO *bp, DSA *x, const EVP_CIPHER *enc, unsigned char *kstr, int klen, pem_password_cb *cb, void *u); int PEM_write_DSAPrivateKey(FILE *fp, DSA *x, const EVP_CIPHER *enc, unsigned char *kstr, int klen, pem_password_cb *cb, void *u); DSA *PEM_read_bio_DSA_PUBKEY(BIO *bp, DSA * *x, pem_password_cb *cb, void *u); DSA *PEM_read_DSA_PUBKEY(FILE *fp, DSA * *x, pem_password_cb *cb, void *u); int PEM_write_bio_DSA_PUBKEY(BIO *bp, DSA *x); int PEM_write_DSA_PUBKEY(FILE *fp, DSA *x); DSA *PEM_read_bio_DSAparams(BIO *bp, DSA * *x, pem_password_cb *cb, void *u); DSA *PEM_read_DSAparams(FILE *fp, DSA * *x, pem_password_cb *cb, void *u); int PEM_write_bio_DSAparams(BIO *bp, const DSA *x); int PEM_write_DSAparams(FILE *fp, const DSA *x); DH *PEM_read_bio_DHparams(BIO *bp, DH * *x, pem_password_cb *cb, void *u); DH *PEM_read_DHparams(FILE *fp, DH * *x, pem_password_cb *cb, void *u); int PEM_write_bio_DHparams(BIO *bp, const DH *x); int PEM_write_DHparams(FILE *fp, const DH *x); EVP_PKEY *PEM_read_bio_PrivateKey(BIO *bp, EVP_PKEY * *x, pem_password_cb *cb, void *u); EVP_PKEY *PEM_read_PrivateKey(FILE *fp, EVP_PKEY * *x, pem_password_cb *cb, void *u); int PEM_write_bio_PrivateKey(BIO *bp, EVP_PKEY *x, const EVP_CIPHER *enc, unsigned char *kstr, int klen, pem_password_cb *cb, void *u); int PEM_write_PrivateKey(FILE *fp, EVP_PKEY *x, const EVP_CIPHER *enc, unsigned char *kstr, int klen, pem_password_cb *cb, void *u); EVP_PKEY *PEM_read_bio_PUBKEY(BIO *bp, EVP_PKEY * *x, pem_password_cb *cb, void *u); EVP_PKEY *PEM_read_PUBKEY(FILE *fp, EVP_PKEY * *x, pem_password_cb *cb, void *u); int PEM_write_bio_PUBKEY(BIO *bp, EVP_PKEY *x); int PEM_write_PUBKEY(FILE *fp, EVP_PKEY *x); int PEM_write_bio_PKCS8PrivateKey_nid(BIO *bp, EVP_PKEY *x, int nid, char *kstr, int klen, pem_password_cb *cb, void *u); int PEM_write_bio_PKCS8PrivateKey(BIO *, EVP_PKEY *, const EVP_CIPHER *, char *, int, pem_password_cb *, void *); int i2d_PKCS8PrivateKey_bio(BIO *bp, EVP_PKEY *x, const EVP_CIPHER *enc, char *kstr, int klen, pem_password_cb *cb, void *u); int i2d_PKCS8PrivateKey_nid_bio(BIO *bp, EVP_PKEY *x, int nid, char *kstr, int klen, pem_password_cb *cb, void *u); EVP_PKEY *d2i_PKCS8PrivateKey_bio(BIO *bp, EVP_PKEY **x, pem_password_cb *cb, void *u); int i2d_PKCS8PrivateKey_fp(FILE *fp, EVP_PKEY *x, const EVP_CIPHER *enc, char *kstr, int klen, pem_password_cb *cb, void *u); int i2d_PKCS8PrivateKey_nid_fp(FILE *fp, EVP_PKEY *x, int nid, char *kstr, int klen, pem_password_cb *cb, void *u); int PEM_write_PKCS8PrivateKey_nid(FILE *fp, EVP_PKEY *x, int nid, char *kstr, int klen, pem_password_cb *cb, void *u); EVP_PKEY *d2i_PKCS8PrivateKey_fp(FILE *fp, EVP_PKEY **x, pem_password_cb *cb, void *u); int PEM_write_PKCS8PrivateKey(FILE *fp, EVP_PKEY *x, const EVP_CIPHER *enc, char *kstr, int klen, pem_password_cb *cd, void *u); void ERR_load_PEM_strings(void); #line 715 "/usr/include/openssl/pem.h" #line 733 "/usr/include/openssl/pem.h" #line 190 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/hmac.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 62 "/usr/include/openssl/hmac.h" typedef struct hmac_ctx_st { const EVP_MD *md; EVP_MD_CTX md_ctx; EVP_MD_CTX i_ctx; EVP_MD_CTX o_ctx; unsigned int key_length; unsigned char key[128]; } HMAC_CTX; void HMAC_CTX_init(HMAC_CTX *ctx); void HMAC_CTX_cleanup(HMAC_CTX *ctx); void HMAC_Init(HMAC_CTX *ctx, const void *key, int len, const EVP_MD *md); void HMAC_Init_ex(HMAC_CTX *ctx, const void *key, int len, const EVP_MD *md, ENGINE *impl); void HMAC_Update(HMAC_CTX *ctx, const unsigned char *data, size_t len); void HMAC_Final(HMAC_CTX *ctx, unsigned char *md, unsigned int *len); unsigned char *HMAC(const EVP_MD *evp_md, const void *key, int key_len, const unsigned char *d, size_t n, unsigned char *md, unsigned int *md_len); void HMAC_CTX_set_flags(HMAC_CTX *ctx, unsigned long flags); #line 191 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/kssl.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 68 "/usr/include/openssl/kssl.h" #line 193 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/symhacks.h" #line 436 "/usr/include/openssl/symhacks.h" #line 195 "/usr/include/openssl/ssl.h" #line 218 "/usr/include/openssl/ssl.h" #line 230 "/usr/include/openssl/ssl.h" #line 237 "/usr/include/openssl/ssl.h" #line 245 "/usr/include/openssl/ssl.h" #line 262 "/usr/include/openssl/ssl.h" #line 304 "/usr/include/openssl/ssl.h" typedef struct ssl_st *ssl_crock_st; typedef struct tls_session_ticket_ext_st TLS_SESSION_TICKET_EXT; typedef struct ssl_cipher_st { int valid; const char *name; unsigned long id; unsigned long algorithms; unsigned long algo_strength; unsigned long algorithm2; int strength_bits; int alg_bits; unsigned long mask; unsigned long mask_strength; } SSL_CIPHER; typedef int (*tls_session_ticket_ext_cb_fn)(SSL *s, const unsigned char *data, int len, void *arg); typedef int (*tls_session_secret_cb_fn)(SSL *s, void *secret, int *secret_len, STACK *peer_ciphers, SSL_CIPHER **cipher, void *arg); typedef struct ssl_method_st { int version; int (*ssl_new) (SSL *s); void (*ssl_clear) (SSL *s); void (*ssl_free) (SSL *s); int (*ssl_accept) (SSL *s); int (*ssl_connect) (SSL *s); int (*ssl_read) (SSL *s, void *buf, int len); int (*ssl_peek) (SSL *s, void *buf, int len); int (*ssl_write) (SSL *s, const void *buf, int len); int (*ssl_shutdown) (SSL *s); int (*ssl_renegotiate) (SSL *s); int (*ssl_renegotiate_check) (SSL *s); long (*ssl_get_message) (SSL *s, int st1, int stn, int mt, long max, int *ok); int (*ssl_read_bytes) (SSL *s, int type, unsigned char *buf, int len, int peek); int (*ssl_write_bytes) (SSL *s, int type, const void *buf_, int len); int (*ssl_dispatch_alert) (SSL *s); long (*ssl_ctrl) (SSL *s, int cmd, long larg, void *parg); long (*ssl_ctx_ctrl) (SSL_CTX *ctx, int cmd, long larg, void *parg); SSL_CIPHER *(*get_cipher_by_char) (const unsigned char *ptr); int (*put_cipher_by_char) (const SSL_CIPHER *cipher, unsigned char *ptr); int (*ssl_pending) (const SSL *s); int (*num_ciphers) (void); SSL_CIPHER *(*get_cipher) (unsigned ncipher); struct ssl_method_st *(*get_ssl_method) (int version); long (*get_timeout) (void); struct ssl3_enc_method *ssl3_enc; int (*ssl_version) (void); long (*ssl_callback_ctrl) (SSL *s, int cb_id, void (*fp) (void)); long (*ssl_ctx_callback_ctrl) (SSL_CTX *s, int cb_id, void (*fp) (void)); } SSL_METHOD; typedef struct ssl_session_st { int ssl_version; unsigned int key_arg_length; unsigned char key_arg[8]; int master_key_length; unsigned char master_key[48]; unsigned int session_id_length; unsigned char session_id[32]; unsigned int sid_ctx_length; unsigned char sid_ctx[32]; int not_resumable; struct sess_cert_st *sess_cert; X509 *peer; long verify_result; int references; long timeout; long time; int compress_meth; SSL_CIPHER *cipher; unsigned long cipher_id; STACK *ciphers; CRYPTO_EX_DATA ex_data; struct ssl_session_st *prev, *next; char *tlsext_hostname; unsigned char *tlsext_tick; size_t tlsext_ticklen; long tlsext_tick_lifetime_hint; } SSL_SESSION; #line 499 "/usr/include/openssl/ssl.h" #line 608 "/usr/include/openssl/ssl.h" #line 623 "/usr/include/openssl/ssl.h" void SSL_CTX_set_msg_callback(SSL_CTX *ctx, void (*cb) (int write_p, int version, int content_type, const void *buf, size_t len, SSL *ssl, void *arg)); void SSL_set_msg_callback(SSL *ssl, void (*cb) (int write_p, int version, int content_type, const void *buf, size_t len, SSL *ssl, void *arg)); typedef int (*GEN_SESSION_CB) (const SSL *ssl, unsigned char *id, unsigned int *id_len); typedef struct ssl_comp_st { int id; const char *name; COMP_METHOD *method; } SSL_COMP; struct ssl_ctx_st { SSL_METHOD *method; STACK *cipher_list; STACK *cipher_list_by_id; struct x509_store_st *cert_store; struct lhash_st *sessions; unsigned long session_cache_size; struct ssl_session_st *session_cache_head; struct ssl_session_st *session_cache_tail; int session_cache_mode; long session_timeout; int (*new_session_cb) (struct ssl_st *ssl, SSL_SESSION *sess); void (*remove_session_cb) (struct ssl_ctx_st *ctx, SSL_SESSION *sess); SSL_SESSION *(*get_session_cb) (struct ssl_st *ssl, unsigned char *data, int len, int *copy); struct { int sess_connect; int sess_connect_renegotiate; int sess_connect_good; int sess_accept; int sess_accept_renegotiate; int sess_accept_good; int sess_miss; int sess_timeout; int sess_cache_full; int sess_hit; int sess_cb_hit; } stats; int references; int (*app_verify_callback) (X509_STORE_CTX *, void *); void *app_verify_arg; pem_password_cb *default_passwd_callback; void *default_passwd_callback_userdata; int (*client_cert_cb) (SSL *ssl, X509 **x509, EVP_PKEY **pkey); int (*app_gen_cookie_cb) (SSL *ssl, unsigned char *cookie, unsigned int *cookie_len); int (*app_verify_cookie_cb) (SSL *ssl, unsigned char *cookie, unsigned int cookie_len); CRYPTO_EX_DATA ex_data; const EVP_MD *rsa_md5; const EVP_MD *md5; const EVP_MD *sha1; STACK *extra_certs; STACK *comp_methods; void (*info_callback) (const SSL *ssl, int type, int val); STACK *client_CA; unsigned long options; unsigned long mode; long max_cert_list; struct cert_st *cert; int read_ahead; void (*msg_callback) (int write_p, int version, int content_type, const void *buf, size_t len, SSL *ssl, void *arg); void *msg_callback_arg; int verify_mode; unsigned int sid_ctx_length; unsigned char sid_ctx[32]; int (*default_verify_callback) (int ok, X509_STORE_CTX *ctx); GEN_SESSION_CB generate_session_id; X509_VERIFY_PARAM *param; int quiet_shutdown; ENGINE *client_cert_engine; int (*tlsext_servername_callback) (SSL *, int *, void *); void *tlsext_servername_arg; unsigned char tlsext_tick_key_name[16]; unsigned char tlsext_tick_hmac_key[16]; unsigned char tlsext_tick_aes_key[16]; int (*tlsext_ticket_key_cb) (SSL *ssl, unsigned char *name, unsigned char *iv, EVP_CIPHER_CTX *ectx, HMAC_CTX *hctx, int enc); int (*tlsext_status_cb) (SSL *ssl, void *arg); void *tlsext_status_arg; }; struct lhash_st *SSL_CTX_sessions(SSL_CTX *ctx); #line 879 "/usr/include/openssl/ssl.h" void SSL_CTX_sess_set_new_cb(SSL_CTX *ctx, int (*new_session_cb) (struct ssl_st *ssl, SSL_SESSION *sess)); int (*SSL_CTX_sess_get_new_cb(SSL_CTX *ctx)) (struct ssl_st *ssl, SSL_SESSION *sess); void SSL_CTX_sess_set_remove_cb(SSL_CTX *ctx, void (*remove_session_cb) (struct ssl_ctx_st *ctx, SSL_SESSION *sess)); void (*SSL_CTX_sess_get_remove_cb(SSL_CTX *ctx)) (struct ssl_ctx_st *ctx, SSL_SESSION *sess); void SSL_CTX_sess_set_get_cb(SSL_CTX *ctx, SSL_SESSION *(*get_session_cb) (struct ssl_st *ssl, unsigned char *data, int len, int *copy)); SSL_SESSION *(*SSL_CTX_sess_get_get_cb(SSL_CTX *ctx)) (struct ssl_st *ssl, unsigned char *Data, int len, int *copy); void SSL_CTX_set_info_callback(SSL_CTX *ctx, void (*cb) (const SSL *ssl, int type, int val)); void (*SSL_CTX_get_info_callback(SSL_CTX *ctx)) (const SSL *ssl, int type, int val); void SSL_CTX_set_client_cert_cb(SSL_CTX *ctx, int (*client_cert_cb) (SSL *ssl, X509 **x509, EVP_PKEY **pkey)); int (*SSL_CTX_get_client_cert_cb(SSL_CTX *ctx)) (SSL *ssl, X509 **x509, EVP_PKEY **pkey); int SSL_CTX_set_client_cert_engine(SSL_CTX *ctx, ENGINE *e); void SSL_CTX_set_cookie_generate_cb(SSL_CTX *ctx, int (*app_gen_cookie_cb) (SSL *ssl, unsigned char *cookie, unsigned int *cookie_len)); void SSL_CTX_set_cookie_verify_cb(SSL_CTX *ctx, int (*app_verify_cookie_cb) (SSL *ssl, unsigned char *cookie, unsigned int cookie_len)); struct ssl_st { int version; int type; SSL_METHOD *method; BIO *rbio; BIO *wbio; BIO *bbio; #line 966 "/usr/include/openssl/ssl.h" int rwstate; int in_handshake; int (*handshake_func) (SSL *); int server; int new_session; int quiet_shutdown; int shutdown; int state; int rstate; BUF_MEM *init_buf; void *init_msg; int init_num; int init_off; unsigned char *packet; unsigned int packet_length; struct ssl2_state_st *s2; struct ssl3_state_st *s3; struct dtls1_state_st *d1; int read_ahead; void (*msg_callback) (int write_p, int version, int content_type, const void *buf, size_t len, SSL *ssl, void *arg); void *msg_callback_arg; int hit; X509_VERIFY_PARAM *param; STACK *cipher_list; STACK *cipher_list_by_id; EVP_CIPHER_CTX *enc_read_ctx; const EVP_MD *read_hash; COMP_CTX *expand; EVP_CIPHER_CTX *enc_write_ctx; const EVP_MD *write_hash; COMP_CTX *compress; struct cert_st *cert; unsigned int sid_ctx_length; unsigned char sid_ctx[32]; SSL_SESSION *session; GEN_SESSION_CB generate_session_id; int verify_mode; int (*verify_callback) (int ok, X509_STORE_CTX *ctx); void (*info_callback) (const SSL *ssl, int type, int val); int error; int error_code; SSL_CTX *ctx; int debug; long verify_result; CRYPTO_EX_DATA ex_data; STACK *client_CA; int references; unsigned long options; unsigned long mode; long max_cert_list; int first_packet; int client_version; void (*tlsext_debug_cb) (SSL *s, int client_server, int type, unsigned char *data, int len, void *arg); void *tlsext_debug_arg; char *tlsext_hostname; int servername_done; int tlsext_status_type; int tlsext_status_expected; STACK *tlsext_ocsp_ids; X509_EXTENSIONS *tlsext_ocsp_exts; unsigned char *tlsext_ocsp_resp; int tlsext_ocsp_resplen; int tlsext_ticket_expected; TLS_SESSION_TICKET_EXT *tlsext_session_ticket; tls_session_ticket_ext_cb_fn tls_session_ticket_ext_cb; void *tls_session_ticket_ext_cb_arg; tls_session_secret_cb_fn tls_session_secret_cb; void *tls_session_secret_cb_arg; SSL_CTX *initial_ctx; }; #line 1 "/usr/include/openssl/ssl2.h" #line 83 "/usr/include/openssl/ssl2.h" #line 103 "/usr/include/openssl/ssl2.h" #line 119 "/usr/include/openssl/ssl2.h" #line 156 "/usr/include/openssl/ssl2.h" typedef struct ssl2_state_st { int three_byte_header; int clear_text; int escape; int ssl2_rollback; unsigned int wnum; int wpend_tot; const unsigned char *wpend_buf; int wpend_off; int wpend_len; int wpend_ret; int rbuf_left; int rbuf_offs; unsigned char *rbuf; unsigned char *wbuf; unsigned char *write_ptr; unsigned int padding; unsigned int rlength; int ract_data_length; unsigned int wlength; int wact_data_length; unsigned char *ract_data; unsigned char *wact_data; unsigned char *mac_data; unsigned char *read_key; unsigned char *write_key; unsigned int challenge_length; unsigned char challenge[32]; unsigned int conn_id_length; unsigned char conn_id[16]; unsigned int key_material_length; unsigned char key_material[24 * 2]; unsigned long read_sequence; unsigned long write_sequence; struct { unsigned int conn_id_length; unsigned int cert_type; unsigned int cert_length; unsigned int csl; unsigned int clear; unsigned int enc; unsigned char ccl[32]; unsigned int cipher_spec_length; unsigned int session_id_length; unsigned int clen; unsigned int rlen; } tmp; } SSL2_STATE; #line 236 "/usr/include/openssl/ssl2.h" #line 257 "/usr/include/openssl/ssl2.h" #line 1147 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/ssl3.h" #line 1 "/usr/include/openssl/ssl.h" #line 126 "/usr/include/openssl/ssl3.h" #line 1 "/usr/include/openssl/pq_compat.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 64 "/usr/include/openssl/pq_compat.h" #line 110 "/usr/include/openssl/pq_compat.h" #line 124 "/usr/include/openssl/pq_compat.h" #line 140 "/usr/include/openssl/pq_compat.h" #line 151 "/usr/include/openssl/pq_compat.h" #line 127 "/usr/include/openssl/ssl3.h" #line 154 "/usr/include/openssl/ssl3.h" #line 161 "/usr/include/openssl/ssl3.h" #line 168 "/usr/include/openssl/ssl3.h" #line 184 "/usr/include/openssl/ssl3.h" #line 196 "/usr/include/openssl/ssl3.h" #line 203 "/usr/include/openssl/ssl3.h" #line 214 "/usr/include/openssl/ssl3.h" #line 221 "/usr/include/openssl/ssl3.h" #line 228 "/usr/include/openssl/ssl3.h" #line 247 "/usr/include/openssl/ssl3.h" #line 254 "/usr/include/openssl/ssl3.h" #line 270 "/usr/include/openssl/ssl3.h" #line 280 "/usr/include/openssl/ssl3.h" #line 308 "/usr/include/openssl/ssl3.h" typedef struct ssl3_record_st { int type; unsigned int length; unsigned int off; unsigned char *data; unsigned char *input; unsigned char *comp; unsigned long epoch; unsigned long seq_num; } SSL3_RECORD; typedef struct ssl3_buffer_st { unsigned char *buf; size_t len; int offset; int left; } SSL3_BUFFER; #line 362 "/usr/include/openssl/ssl3.h" typedef struct ssl3_state_st { long flags; int delay_buf_pop_ret; unsigned char read_sequence[8]; unsigned char read_mac_secret[64]; unsigned char write_sequence[8]; unsigned char write_mac_secret[64]; unsigned char server_random[32]; unsigned char client_random[32]; int need_empty_fragments; int empty_fragment_done; SSL3_BUFFER rbuf; SSL3_BUFFER wbuf; SSL3_RECORD rrec; SSL3_RECORD wrec; unsigned char alert_fragment[2]; unsigned int alert_fragment_len; unsigned char handshake_fragment[4]; unsigned int handshake_fragment_len; unsigned int wnum; int wpend_tot; int wpend_type; int wpend_ret; const unsigned char *wpend_buf; EVP_MD_CTX finish_dgst1; EVP_MD_CTX finish_dgst2; int change_cipher_spec; int warn_alert; int fatal_alert; int alert_dispatch; unsigned char send_alert[2]; int renegotiate; int total_renegotiations; int num_renegotiations; int in_read_app_data; struct { unsigned char cert_verify_md[64 * 2]; unsigned char finish_md[64 * 2]; int finish_md_len; unsigned char peer_finish_md[64 * 2]; int peer_finish_md_len; unsigned long message_size; int message_type; SSL_CIPHER *new_cipher; DH *dh; int next_state; int reuse_message; int cert_req; int ctype_num; char ctype[7]; STACK *ca_names; int use_rsa_tmp; int key_block_length; unsigned char *key_block; const EVP_CIPHER *new_sym_enc; const EVP_MD *new_hash; const SSL_COMP *new_compression; int cert_request; } tmp; unsigned char previous_client_finished[64]; unsigned char previous_client_finished_len; unsigned char previous_server_finished[64]; unsigned char previous_server_finished_len; int send_connection_binding; } SSL3_STATE; #line 507 "/usr/include/openssl/ssl3.h" #line 520 "/usr/include/openssl/ssl3.h" #line 529 "/usr/include/openssl/ssl3.h" #line 554 "/usr/include/openssl/ssl3.h" #line 565 "/usr/include/openssl/ssl3.h" #line 574 "/usr/include/openssl/ssl3.h" #line 588 "/usr/include/openssl/ssl3.h" #line 600 "/usr/include/openssl/ssl3.h" #line 1148 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/tls1.h" #line 122 "/usr/include/openssl/tls1.h" #line 129 "/usr/include/openssl/tls1.h" #line 140 "/usr/include/openssl/tls1.h" const char *SSL_get_servername(const SSL *s, const int type); int SSL_get_servername_type(const SSL *s); #line 226 "/usr/include/openssl/tls1.h" #line 235 "/usr/include/openssl/tls1.h" #line 242 "/usr/include/openssl/tls1.h" #line 250 "/usr/include/openssl/tls1.h" #line 257 "/usr/include/openssl/tls1.h" #line 265 "/usr/include/openssl/tls1.h" #line 314 "/usr/include/openssl/tls1.h" #line 322 "/usr/include/openssl/tls1.h" #line 329 "/usr/include/openssl/tls1.h" #line 368 "/usr/include/openssl/tls1.h" #line 375 "/usr/include/openssl/tls1.h" #line 383 "/usr/include/openssl/tls1.h" #line 392 "/usr/include/openssl/tls1.h" #line 412 "/usr/include/openssl/tls1.h" #line 462 "/usr/include/openssl/tls1.h" struct tls_session_ticket_ext_st { unsigned short length; void *data; }; #line 1149 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/dtls1.h" #line 1 "/usr/include/openssl/pqueue.h" #line 1 "/usr/include/string.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/string.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 34 "/usr/include/string.h" extern void *memcpy (void * __dest, const void * __src, size_t __n) ; extern void *memmove (void *__dest, const void *__src, size_t __n) ; extern void *memccpy (void * __dest, const void * __src, int __c, size_t __n) ; extern void *memset (void *__s, int __c, size_t __n) ; extern int memcmp (const void *__s1, const void *__s2, size_t __n) ; extern void *memchr (const void *__s, int __c, size_t __n) ; #line 80 "/usr/include/string.h" extern char *strcpy (char * __dest, const char * __src) ; extern char *strncpy (char * __dest, const char * __src, size_t __n) ; extern char *strcat (char * __dest, const char * __src) ; extern char *strncat (char * __dest, const char * __src, size_t __n) ; extern int strcmp (const char *__s1, const char *__s2) ; extern int strncmp (const char *__s1, const char *__s2, size_t __n) ; extern int strcoll (const char *__s1, const char *__s2) ; extern size_t strxfrm (char * __dest, const char * __src, size_t __n) ; #line 127 "/usr/include/string.h" extern char *strdup (const char *__s) ; #line 164 "/usr/include/string.h" extern char *strchr (const char *__s, int __c) ; extern char *strrchr (const char *__s, int __c) ; #line 180 "/usr/include/string.h" extern size_t strcspn (const char *__s, const char *__reject) ; extern size_t strspn (const char *__s, const char *__accept) ; extern char *strpbrk (const char *__s, const char *__accept) ; extern char *strstr (const char *__haystack, const char *__needle) ; extern char *strtok (char * __s, const char * __delim) ; extern char *__strtok_r (char * __s, const char * __delim, char ** __save_ptr) ; extern char *strtok_r (char * __s, const char * __delim, char ** __save_ptr) ; #line 238 "/usr/include/string.h" extern size_t strlen (const char *__s) ; #line 252 "/usr/include/string.h" extern char *strerror (int __errnum) ; extern int __xpg_strerror_r (int __errnum, char *__buf, size_t __buflen) ; #line 285 "/usr/include/string.h" extern void __bzero (void *__s, size_t __n) ; extern void bcopy (const void *__src, void *__dest, size_t __n) ; extern void bzero (void *__s, size_t __n) ; extern int bcmp (const void *__s1, const void *__s2, size_t __n) ; extern char *index (const char *__s, int __c) ; extern char *rindex (const char *__s, int __c) ; extern int ffs (int __i) ; #line 329 "/usr/include/string.h" extern int strcasecmp (const char *__s1, const char *__s2) ; extern int strncasecmp (const char *__s1, const char *__s2, size_t __n) ; #line 350 "/usr/include/string.h" extern char *strsep (char ** __stringp, const char * __delim) ; #line 396 "/usr/include/string.h" #line 431 "/usr/include/string.h" #line 66 "/usr/include/openssl/pqueue.h" typedef struct _pqueue *pqueue; typedef struct _pitem { unsigned long priority; void *data; struct _pitem *next; } pitem; typedef struct _pitem *piterator; pitem *pitem_new(unsigned long priority, void *data); void pitem_free(pitem *item); pqueue pqueue_new(void); void pqueue_free(pqueue pq); pitem *pqueue_insert(pqueue pq, pitem *item); pitem *pqueue_peek(pqueue pq); pitem *pqueue_pop(pqueue pq); pitem *pqueue_find(pqueue pq, unsigned long priority); pitem *pqueue_iterator(pqueue pq); pitem *pqueue_next(piterator *iter); void pqueue_print(pqueue pq); int pqueue_size(pqueue pq); #line 65 "/usr/include/openssl/dtls1.h" #line 1 "/usr/include/sys/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 24 "/usr/include/sys/time.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" #line 30 "/usr/include/sys/time.h" #line 52 "/usr/include/sys/time.h" struct timezone { int tz_minuteswest; int tz_dsttime; }; typedef struct timezone * __timezone_ptr_t; extern int gettimeofday (struct timeval * __tv, __timezone_ptr_t __tz) ; extern int settimeofday (const struct timeval *__tv, const struct timezone *__tz) ; extern int adjtime (const struct timeval *__delta, struct timeval *__olddelta) ; enum __itimer_which { ITIMER_REAL = 0, ITIMER_VIRTUAL = 1, ITIMER_PROF = 2 }; struct itimerval { struct timeval it_interval; struct timeval it_value; }; typedef int __itimer_which_t; extern int getitimer (__itimer_which_t __which, struct itimerval *__value) ; extern int setitimer (__itimer_which_t __which, const struct itimerval * __new, struct itimerval * __old) ; extern int utimes (const char *__file, const struct timeval __tvp[2]) ; extern int lutimes (const char *__file, const struct timeval __tvp[2]) ; extern int futimes (int __fd, const struct timeval __tvp[2]) ; #line 159 "/usr/include/sys/time.h" #line 190 "/usr/include/sys/time.h" #line 76 "/usr/include/openssl/dtls1.h" typedef struct dtls1_bitmap_st { unsigned long map; unsigned long length; unsigned long max_seq_num; } DTLS1_BITMAP; struct dtls1_retransmit_state { EVP_CIPHER_CTX *enc_write_ctx; const EVP_MD *write_hash; COMP_CTX *compress; SSL_SESSION *session; unsigned short epoch; }; struct hm_header_st { unsigned char type; unsigned long msg_len; unsigned short seq; unsigned long frag_off; unsigned long frag_len; unsigned int is_ccs; struct dtls1_retransmit_state saved_retransmit_state; }; struct ccs_header_st { unsigned char type; unsigned short seq; }; struct dtls1_timeout_st { unsigned int read_timeouts; unsigned int write_timeouts; unsigned int num_alerts; }; typedef struct record_pqueue_st { unsigned short epoch; pqueue q; } record_pqueue; typedef struct hm_fragment_st { struct hm_header_st msg_header; unsigned char *fragment; unsigned char *reassembly; } hm_fragment; typedef struct dtls1_state_st { unsigned int send_cookie; unsigned char cookie[256]; unsigned char rcvd_cookie[256]; unsigned int cookie_len; unsigned short r_epoch; unsigned short w_epoch; DTLS1_BITMAP bitmap; DTLS1_BITMAP next_bitmap; unsigned short handshake_write_seq; unsigned short next_handshake_write_seq; unsigned short handshake_read_seq; unsigned char last_write_sequence[8]; record_pqueue unprocessed_rcds; record_pqueue processed_rcds; pqueue buffered_messages; pqueue sent_messages; record_pqueue buffered_app_data; unsigned int listen; unsigned int mtu; struct hm_header_st w_msg_hdr; struct hm_header_st r_msg_hdr; struct dtls1_timeout_st timeout; struct timeval next_timeout; unsigned short timeout_duration; unsigned char alert_fragment[2]; unsigned int alert_fragment_len; unsigned char handshake_fragment[12]; unsigned int handshake_fragment_len; unsigned int retransmitting; unsigned int change_cipher_spec_ok; } DTLS1_STATE; typedef struct dtls1_record_data_st { unsigned char *packet; unsigned int packet_length; SSL3_BUFFER rbuf; SSL3_RECORD rrec; } DTLS1_RECORD_DATA; #line 1150 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/ssl23.h" #line 1151 "/usr/include/openssl/ssl.h" #line 1163 "/usr/include/openssl/ssl.h" #line 1179 "/usr/include/openssl/ssl.h" #line 1193 "/usr/include/openssl/ssl.h" #line 1201 "/usr/include/openssl/ssl.h" size_t SSL_get_finished(const SSL *s, void *buf, size_t count); size_t SSL_get_peer_finished(const SSL *s, void *buf, size_t count); #line 1239 "/usr/include/openssl/ssl.h" #line 1252 "/usr/include/openssl/ssl.h" #line 1265 "/usr/include/openssl/ssl.h" #line 1286 "/usr/include/openssl/ssl.h" #line 1310 "/usr/include/openssl/ssl.h" #line 1325 "/usr/include/openssl/ssl.h" #line 1333 "/usr/include/openssl/ssl.h" #line 1341 "/usr/include/openssl/ssl.h" #line 1362 "/usr/include/openssl/ssl.h" #line 1369 "/usr/include/openssl/ssl.h" #line 1382 "/usr/include/openssl/ssl.h" #line 1392 "/usr/include/openssl/ssl.h" #line 1412 "/usr/include/openssl/ssl.h" #line 1421 "/usr/include/openssl/ssl.h" #line 1430 "/usr/include/openssl/ssl.h" #line 1439 "/usr/include/openssl/ssl.h" BIO_METHOD *BIO_f_ssl(void); BIO *BIO_new_ssl(SSL_CTX *ctx, int client); BIO *BIO_new_ssl_connect(SSL_CTX *ctx); BIO *BIO_new_buffer_ssl_connect(SSL_CTX *ctx); int BIO_ssl_copy_session_id(BIO *to, BIO *from); void BIO_ssl_shutdown(BIO *ssl_bio); int SSL_CTX_set_cipher_list(SSL_CTX *, const char *str); SSL_CTX *SSL_CTX_new(SSL_METHOD *meth); void SSL_CTX_free(SSL_CTX *); long SSL_CTX_set_timeout(SSL_CTX *ctx, long t); long SSL_CTX_get_timeout(const SSL_CTX *ctx); X509_STORE *SSL_CTX_get_cert_store(const SSL_CTX *); void SSL_CTX_set_cert_store(SSL_CTX *, X509_STORE *); int SSL_want(const SSL *s); int SSL_clear(SSL *s); void SSL_CTX_flush_sessions(SSL_CTX *ctx, long tm); SSL_CIPHER *SSL_get_current_cipher(const SSL *s); int SSL_CIPHER_get_bits(const SSL_CIPHER *c, int *alg_bits); char *SSL_CIPHER_get_version(const SSL_CIPHER *c); const char *SSL_CIPHER_get_name(const SSL_CIPHER *c); int SSL_get_fd(const SSL *s); int SSL_get_rfd(const SSL *s); int SSL_get_wfd(const SSL *s); const char *SSL_get_cipher_list(const SSL *s, int n); char *SSL_get_shared_ciphers(const SSL *s, char *buf, int len); int SSL_get_read_ahead(const SSL *s); int SSL_pending(const SSL *s); int SSL_set_fd(SSL *s, int fd); int SSL_set_rfd(SSL *s, int fd); int SSL_set_wfd(SSL *s, int fd); void SSL_set_bio(SSL *s, BIO *rbio, BIO *wbio); BIO *SSL_get_rbio(const SSL *s); BIO *SSL_get_wbio(const SSL *s); int SSL_set_cipher_list(SSL *s, const char *str); void SSL_set_read_ahead(SSL *s, int yes); int SSL_get_verify_mode(const SSL *s); int SSL_get_verify_depth(const SSL *s); int (*SSL_get_verify_callback(const SSL *s)) (int, X509_STORE_CTX *); void SSL_set_verify(SSL *s, int mode, int (*callback) (int ok, X509_STORE_CTX *ctx)); void SSL_set_verify_depth(SSL *s, int depth); int SSL_use_RSAPrivateKey(SSL *ssl, RSA *rsa); int SSL_use_RSAPrivateKey_ASN1(SSL *ssl, unsigned char *d, long len); int SSL_use_PrivateKey(SSL *ssl, EVP_PKEY *pkey); int SSL_use_PrivateKey_ASN1(int pk, SSL *ssl, const unsigned char *d, long len); int SSL_use_certificate(SSL *ssl, X509 *x); int SSL_use_certificate_ASN1(SSL *ssl, const unsigned char *d, int len); int SSL_use_RSAPrivateKey_file(SSL *ssl, const char *file, int type); int SSL_use_PrivateKey_file(SSL *ssl, const char *file, int type); int SSL_use_certificate_file(SSL *ssl, const char *file, int type); int SSL_CTX_use_RSAPrivateKey_file(SSL_CTX *ctx, const char *file, int type); int SSL_CTX_use_PrivateKey_file(SSL_CTX *ctx, const char *file, int type); int SSL_CTX_use_certificate_file(SSL_CTX *ctx, const char *file, int type); int SSL_CTX_use_certificate_chain_file(SSL_CTX *ctx, const char *file); STACK *SSL_load_client_CA_file(const char *file); int SSL_add_file_cert_subjects_to_stack(STACK *stackCAs, const char *file); int SSL_add_dir_cert_subjects_to_stack(STACK *stackCAs, const char *dir); void SSL_load_error_strings(void); const char *SSL_state_string(const SSL *s); const char *SSL_rstate_string(const SSL *s); const char *SSL_state_string_long(const SSL *s); const char *SSL_rstate_string_long(const SSL *s); long SSL_SESSION_get_time(const SSL_SESSION *s); long SSL_SESSION_set_time(SSL_SESSION *s, long t); long SSL_SESSION_get_timeout(const SSL_SESSION *s); long SSL_SESSION_set_timeout(SSL_SESSION *s, long t); void SSL_copy_session_id(SSL *to, const SSL *from); SSL_SESSION *SSL_SESSION_new(void); unsigned long SSL_SESSION_hash(const SSL_SESSION *a); int SSL_SESSION_cmp(const SSL_SESSION *a, const SSL_SESSION *b); const unsigned char *SSL_SESSION_get_id(const SSL_SESSION *s, unsigned int *len); int SSL_SESSION_print_fp(FILE *fp, const SSL_SESSION *ses); int SSL_SESSION_print(BIO *fp, const SSL_SESSION *ses); void SSL_SESSION_free(SSL_SESSION *ses); int i2d_SSL_SESSION(SSL_SESSION *in, unsigned char **pp); int SSL_set_session(SSL *to, SSL_SESSION *session); int SSL_CTX_add_session(SSL_CTX *s, SSL_SESSION *c); int SSL_CTX_remove_session(SSL_CTX *, SSL_SESSION *c); int SSL_CTX_set_generate_session_id(SSL_CTX *, GEN_SESSION_CB); int SSL_set_generate_session_id(SSL *, GEN_SESSION_CB); int SSL_has_matching_session_id(const SSL *ssl, const unsigned char *id, unsigned int id_len); SSL_SESSION *d2i_SSL_SESSION(SSL_SESSION **a, const unsigned char **pp, long length); X509 *SSL_get_peer_certificate(const SSL *s); STACK *SSL_get_peer_cert_chain(const SSL *s); int SSL_CTX_get_verify_mode(const SSL_CTX *ctx); int SSL_CTX_get_verify_depth(const SSL_CTX *ctx); int (*SSL_CTX_get_verify_callback(const SSL_CTX *ctx)) (int, X509_STORE_CTX *); void SSL_CTX_set_verify(SSL_CTX *ctx, int mode, int (*callback) (int, X509_STORE_CTX *)); void SSL_CTX_set_verify_depth(SSL_CTX *ctx, int depth); void SSL_CTX_set_cert_verify_callback(SSL_CTX *ctx, int (*cb) (X509_STORE_CTX *, void *), void *arg); int SSL_CTX_use_RSAPrivateKey(SSL_CTX *ctx, RSA *rsa); int SSL_CTX_use_RSAPrivateKey_ASN1(SSL_CTX *ctx, const unsigned char *d, long len); int SSL_CTX_use_PrivateKey(SSL_CTX *ctx, EVP_PKEY *pkey); int SSL_CTX_use_PrivateKey_ASN1(int pk, SSL_CTX *ctx, const unsigned char *d, long len); int SSL_CTX_use_certificate(SSL_CTX *ctx, X509 *x); int SSL_CTX_use_certificate_ASN1(SSL_CTX *ctx, int len, const unsigned char *d); void SSL_CTX_set_default_passwd_cb(SSL_CTX *ctx, pem_password_cb *cb); void SSL_CTX_set_default_passwd_cb_userdata(SSL_CTX *ctx, void *u); int SSL_CTX_check_private_key(const SSL_CTX *ctx); int SSL_check_private_key(const SSL *ctx); int SSL_CTX_set_session_id_context(SSL_CTX *ctx, const unsigned char *sid_ctx, unsigned int sid_ctx_len); SSL *SSL_new(SSL_CTX *ctx); int SSL_set_session_id_context(SSL *ssl, const unsigned char *sid_ctx, unsigned int sid_ctx_len); int SSL_CTX_set_purpose(SSL_CTX *s, int purpose); int SSL_set_purpose(SSL *s, int purpose); int SSL_CTX_set_trust(SSL_CTX *s, int trust); int SSL_set_trust(SSL *s, int trust); void SSL_free(SSL *ssl); int SSL_accept(SSL *ssl); int SSL_connect(SSL *ssl); int SSL_read(SSL *ssl, void *buf, int num); int SSL_peek(SSL *ssl, void *buf, int num); int SSL_write(SSL *ssl, const void *buf, int num); long SSL_ctrl(SSL *ssl, int cmd, long larg, void *parg); long SSL_callback_ctrl(SSL *, int, void (*)(void)); long SSL_CTX_ctrl(SSL_CTX *ctx, int cmd, long larg, void *parg); long SSL_CTX_callback_ctrl(SSL_CTX *, int, void (*)(void)); int SSL_get_error(const SSL *s, int ret_code); const char *SSL_get_version(const SSL *s); int SSL_CTX_set_ssl_version(SSL_CTX *ctx, SSL_METHOD *meth); SSL_METHOD *SSLv2_method(void); SSL_METHOD *SSLv2_server_method(void); SSL_METHOD *SSLv2_client_method(void); SSL_METHOD *SSLv3_method(void); SSL_METHOD *SSLv3_server_method(void); SSL_METHOD *SSLv3_client_method(void); SSL_METHOD *SSLv23_method(void); SSL_METHOD *SSLv23_server_method(void); SSL_METHOD *SSLv23_client_method(void); SSL_METHOD *TLSv1_method(void); SSL_METHOD *TLSv1_server_method(void); SSL_METHOD *TLSv1_client_method(void); SSL_METHOD *DTLSv1_method(void); SSL_METHOD *DTLSv1_server_method(void); SSL_METHOD *DTLSv1_client_method(void); STACK *SSL_get_ciphers(const SSL *s); int SSL_do_handshake(SSL *s); int SSL_renegotiate(SSL *s); int SSL_renegotiate_pending(SSL *s); int SSL_shutdown(SSL *s); SSL_METHOD *SSL_get_ssl_method(SSL *s); int SSL_set_ssl_method(SSL *s, SSL_METHOD *method); const char *SSL_alert_type_string_long(int value); const char *SSL_alert_type_string(int value); const char *SSL_alert_desc_string_long(int value); const char *SSL_alert_desc_string(int value); void SSL_set_client_CA_list(SSL *s, STACK *name_list); void SSL_CTX_set_client_CA_list(SSL_CTX *ctx, STACK *name_list); STACK *SSL_get_client_CA_list(const SSL *s); STACK *SSL_CTX_get_client_CA_list(const SSL_CTX *s); int SSL_add_client_CA(SSL *ssl, X509 *x); int SSL_CTX_add_client_CA(SSL_CTX *ctx, X509 *x); void SSL_set_connect_state(SSL *s); void SSL_set_accept_state(SSL *s); long SSL_get_default_timeout(const SSL *s); int SSL_library_init(void); char *SSL_CIPHER_description(const SSL_CIPHER *, char *buf, int size); STACK *SSL_dup_CA_list(STACK *sk); SSL *SSL_dup(SSL *ssl); X509 *SSL_get_certificate(const SSL *ssl); struct evp_pkey_st *SSL_get_privatekey(SSL *ssl); void SSL_CTX_set_quiet_shutdown(SSL_CTX *ctx, int mode); int SSL_CTX_get_quiet_shutdown(const SSL_CTX *ctx); void SSL_set_quiet_shutdown(SSL *ssl, int mode); int SSL_get_quiet_shutdown(const SSL *ssl); void SSL_set_shutdown(SSL *ssl, int mode); int SSL_get_shutdown(const SSL *ssl); int SSL_version(const SSL *ssl); int SSL_CTX_set_default_verify_paths(SSL_CTX *ctx); int SSL_CTX_load_verify_locations(SSL_CTX *ctx, const char *CAfile, const char *CApath); SSL_SESSION *SSL_get_session(const SSL *ssl); SSL_SESSION *SSL_get1_session(SSL *ssl); SSL_CTX *SSL_get_SSL_CTX(const SSL *ssl); SSL_CTX *SSL_set_SSL_CTX(SSL *ssl, SSL_CTX *ctx); void SSL_set_info_callback(SSL *ssl, void (*cb) (const SSL *ssl, int type, int val)); void (*SSL_get_info_callback(const SSL *ssl)) (const SSL *ssl, int type, int val); int SSL_state(const SSL *ssl); void SSL_set_verify_result(SSL *ssl, long v); long SSL_get_verify_result(const SSL *ssl); int SSL_set_ex_data(SSL *ssl, int idx, void *data); void *SSL_get_ex_data(const SSL *ssl, int idx); int SSL_get_ex_new_index(long argl, void *argp, CRYPTO_EX_new *new_func, CRYPTO_EX_dup *dup_func, CRYPTO_EX_free *free_func); int SSL_SESSION_set_ex_data(SSL_SESSION *ss, int idx, void *data); void *SSL_SESSION_get_ex_data(const SSL_SESSION *ss, int idx); int SSL_SESSION_get_ex_new_index(long argl, void *argp, CRYPTO_EX_new *new_func, CRYPTO_EX_dup *dup_func, CRYPTO_EX_free *free_func); int SSL_CTX_set_ex_data(SSL_CTX *ssl, int idx, void *data); void *SSL_CTX_get_ex_data(const SSL_CTX *ssl, int idx); int SSL_CTX_get_ex_new_index(long argl, void *argp, CRYPTO_EX_new *new_func, CRYPTO_EX_dup *dup_func, CRYPTO_EX_free *free_func); int SSL_get_ex_data_X509_STORE_CTX_idx(void); #line 1734 "/usr/include/openssl/ssl.h" #line 1749 "/usr/include/openssl/ssl.h" void SSL_CTX_set_tmp_rsa_callback(SSL_CTX *ctx, RSA *(*cb) (SSL *ssl, int is_export, int keylength)); void SSL_set_tmp_rsa_callback(SSL *ssl, RSA *(*cb) (SSL *ssl, int is_export, int keylength)); void SSL_CTX_set_tmp_dh_callback(SSL_CTX *ctx, DH *(*dh) (SSL *ssl, int is_export, int keylength)); void SSL_set_tmp_dh_callback(SSL *ssl, DH *(*dh) (SSL *ssl, int is_export, int keylength)); const COMP_METHOD *SSL_get_current_compression(SSL *s); const COMP_METHOD *SSL_get_current_expansion(SSL *s); const char *SSL_COMP_get_name(const COMP_METHOD *comp); STACK *SSL_COMP_get_compression_methods(void); int SSL_COMP_add_compression_method(int id, COMP_METHOD *cm); #line 1782 "/usr/include/openssl/ssl.h" int SSL_set_session_ticket_ext(SSL *s, void *ext_data, int ext_len); int SSL_set_session_ticket_ext_cb(SSL *s, tls_session_ticket_ext_cb_fn cb,void *arg); int SSL_set_session_secret_cb(SSL *s, tls_session_secret_cb_fn tls_session_secret_cb, void *arg); void ERR_load_SSL_strings(void); #line 1998 "/usr/include/openssl/ssl.h" #line 2257 "/usr/include/openssl/ssl.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Found header files ['openssl/ssl.h'] in [] Popping language C ================================================================================ TEST checkSharedLibrary from config.packages.ssl(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:626) TESTING: checkSharedLibrary from config.packages.ssl(config/BuildSystem/config/package.py:626) By default we don't care about checking if the library is shared Popping language C Not a clone of PETSc, don't need Lgrind Pushing language C ================================================================================ TEST configureLibrary from config.packages.valgrind(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:572) TESTING: configureLibrary from config.packages.valgrind(config/BuildSystem/config/package.py:572) Find an installation and check if it can work with PETSc ================================================================================== Checking for a functional valgrind Not checking for library in Compiler specific search VALGRIND: [] because no functions given to check for ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names No functions to check for in library [] [] Checking for headers Compiler specific search VALGRIND: [] Pushing language C ================================================================================ TEST checkInclude from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['valgrind/valgrind.h'] in [] Checking include with compiler flags var CPPFLAGS [] Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c".: Popping language C Not checking for library in Package specific search directory VALGRIND: [] because no functions given to check for ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names No functions to check for in library [] [] Checking for headers Package specific search directory VALGRIND: ['/usr/local/include'] Pushing language C ================================================================================ TEST checkInclude from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['valgrind/valgrind.h'] in ['/usr/local/include'] Checking include with compiler flags var CPPFLAGS ['/usr/local/include'] Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/usr/local/include /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c".: Popping language C Not checking for library in Package specific search directory VALGRIND: [] because no functions given to check for ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names No functions to check for in library [] [] Checking for headers Package specific search directory VALGRIND: ['/usr/local/include'] Pushing language C ================================================================================ TEST checkInclude from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['valgrind/valgrind.h'] in ['/usr/local/include'] Checking include with compiler flags var CPPFLAGS ['/usr/local/include'] Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/usr/local/include /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c".: Popping language C Not checking for library in Package specific search directory VALGRIND: [] because no functions given to check for ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names No functions to check for in library [] [] Checking for headers Package specific search directory VALGRIND: ['/opt/local/include'] Pushing language C ================================================================================ TEST checkInclude from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['valgrind/valgrind.h'] in ['/opt/local/include'] Checking include with compiler flags var CPPFLAGS ['/opt/local/include'] Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/opt/local/include /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c".: Popping language C VALGRIND: DirPath not found.. skipping: /opt/local/lib64 Executing: uname -s stdout: Linux =============================================================================== It appears you do not have valgrind installed on your system. We HIGHLY recommend you install it from www.valgrind.org Or install valgrind-devel or equivalent using your package manager. Then rerun ./configure =============================================================================== Popping language C ================================================================================ TEST alternateConfigureLibrary from config.packages.pami(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.pami(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.PARTY(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.PARTY(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default Not a clone of PETSc or no Fortran, don't need Sowing ================================================================================ TEST alternateConfigureLibrary from config.packages.p4est(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.p4est(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.tchem(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.tchem(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.cgns(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.cgns(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.fftw(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.fftw(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.Chaco(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.Chaco(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.Mathematica(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.Mathematica(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST locateC2html from config.packages.c2html(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/c2html.py:33) TESTING: locateC2html from config.packages.c2html(config/BuildSystem/config/packages/c2html.py:33) Looking for default C2html executable Checking for program /opt/FJSVtclang/check/c2html...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/c2html...not found Checking for program /opt/kusu/bin/c2html...not found Checking for program /opt/kusu/sbin/c2html...not found Checking for program /usr/pgsql-9.0/bin/c2html...not found Checking for program /usr/local/bin/c2html...not found Checking for program /bin/c2html...not found Checking for program /usr/bin/c2html...not found Checking for program /home/hp150306/t00196/bin/c2html...not found Checking for program /home/hp150306/t00196/shortcut/c2html...not found Checking for program /opt/FJSVxosmmm/sbin/c2html...not found Checking for program /home/hp150306/t00196/c2html...not found Checking for program /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/bin/win32fe/c2html...not found ================================================================================ TEST alternateConfigureLibrary from config.packages.Numpy(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.Numpy(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.mpi4py(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/mpi4py.py:70) TESTING: alternateConfigureLibrary from config.packages.mpi4py(config/BuildSystem/config/packages/mpi4py.py:70) Defined make rule "mpi4py-build" with dependencies "" and code [] Defined make rule "mpi4py-install" with dependencies "" and code [] ================================================================================ TEST alternateConfigureLibrary from config.packages.petsc4py(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/petsc4py.py:103) TESTING: alternateConfigureLibrary from config.packages.petsc4py(config/BuildSystem/config/packages/petsc4py.py:103) Defined make rule "petsc4py-build" with dependencies "" and code [] Defined make rule "petsc4py-install" with dependencies "" and code [] ================================================================================ TEST alternateConfigureLibrary from config.packages.Matlab(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/Matlab.py:35) TESTING: alternateConfigureLibrary from config.packages.Matlab(config/BuildSystem/config/packages/Matlab.py:35) ================================================================================ TEST alternateConfigureLibrary from config.packages.MatlabEngine(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.MatlabEngine(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.opengl(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.opengl(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.glut(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.glut(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.opengles(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.opengles(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.boost(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.boost(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.PTScotch(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.PTScotch(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default Pushing language C ================================================================================ TEST configureLibrary from config.packages.hwloc(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:572) TESTING: configureLibrary from config.packages.hwloc(config/BuildSystem/config/package.py:572) Find an installation and check if it can work with PETSc ================================================================================== Checking for a functional hwloc Checking for library in Compiler specific search HWLOC: [] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [hwloc_topology_init] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char hwloc_topology_init(); static void _check_hwloc_topology_init() { hwloc_topology_init(); } int main() { _check_hwloc_topology_init();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o: In function `_check_hwloc_topology_init': conftest.c:(.text+0x4): undefined reference to `hwloc_topology_init' Popping language C Checking for library in Compiler specific search HWLOC: ['libhwloc.a'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [hwloc_topology_init] in library ['libhwloc.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char hwloc_topology_init(); static void _check_hwloc_topology_init() { hwloc_topology_init(); } int main() { _check_hwloc_topology_init();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -lhwloc -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lhwloc Popping language C Checking for library in Compiler specific search HWLOC: ['libhwloc.a', 'libxml2.a'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [hwloc_topology_init] in library ['libhwloc.a', 'libxml2.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char hwloc_topology_init(); static void _check_hwloc_topology_init() { hwloc_topology_init(); } int main() { _check_hwloc_topology_init();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -lhwloc -lxml2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lhwloc Popping language C Checking for library in Package specific search directory HWLOC: ['/usr/local/lib/libhwloc.a'] Contents: ['bin', 'etc', 'games', 'include', 'lib', 'lib64', 'libexec', 'sbin', 'share', 'src'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [hwloc_topology_init] in library ['/usr/local/lib/libhwloc.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char hwloc_topology_init(); static void _check_hwloc_topology_init() { hwloc_topology_init(); } int main() { _check_hwloc_topology_init();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib -L/usr/local/lib -lhwloc -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lhwloc Popping language C Checking for library in Package specific search directory HWLOC: ['/usr/local/lib/libhwloc.a', 'libxml2.a'] Contents: ['bin', 'etc', 'games', 'include', 'lib', 'lib64', 'libexec', 'sbin', 'share', 'src'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [hwloc_topology_init] in library ['/usr/local/lib/libhwloc.a', 'libxml2.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char hwloc_topology_init(); static void _check_hwloc_topology_init() { hwloc_topology_init(); } int main() { _check_hwloc_topology_init();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib -L/usr/local/lib -lhwloc -lxml2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lhwloc Popping language C Checking for library in Package specific search directory HWLOC: ['/usr/local/lib64/libhwloc.a'] Contents: ['bin', 'etc', 'games', 'include', 'lib', 'lib64', 'libexec', 'sbin', 'share', 'src'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [hwloc_topology_init] in library ['/usr/local/lib64/libhwloc.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char hwloc_topology_init(); static void _check_hwloc_topology_init() { hwloc_topology_init(); } int main() { _check_hwloc_topology_init();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib64 -L/usr/local/lib64 -lhwloc -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lhwloc Popping language C Checking for library in Package specific search directory HWLOC: ['/usr/local/lib64/libhwloc.a', 'libxml2.a'] Contents: ['bin', 'etc', 'games', 'include', 'lib', 'lib64', 'libexec', 'sbin', 'share', 'src'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [hwloc_topology_init] in library ['/usr/local/lib64/libhwloc.a', 'libxml2.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char hwloc_topology_init(); static void _check_hwloc_topology_init() { hwloc_topology_init(); } int main() { _check_hwloc_topology_init();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib64 -L/usr/local/lib64 -lhwloc -lxml2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lhwloc Popping language C Checking for library in Package specific search directory HWLOC: ['/opt/local/lib/libhwloc.a'] Contents: ['bin', 'conf', 'gcc', 'gcc-4.8.1', 'include', 'lib', 'Python-2.7.3', 'Python-2.7.3.omp', 'share', 'sparc64-unknown-linux-gnu', 'openjdk7u45', 'mpiJava', 'mpigcc', 'GCC_4.6.3'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [hwloc_topology_init] in library ['/opt/local/lib/libhwloc.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char hwloc_topology_init(); static void _check_hwloc_topology_init() { hwloc_topology_init(); } int main() { _check_hwloc_topology_init();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -Wl,-rpath,/opt/local/lib -L/opt/local/lib -lhwloc -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lhwloc Popping language C Checking for library in Package specific search directory HWLOC: ['/opt/local/lib/libhwloc.a', 'libxml2.a'] Contents: ['bin', 'conf', 'gcc', 'gcc-4.8.1', 'include', 'lib', 'Python-2.7.3', 'Python-2.7.3.omp', 'share', 'sparc64-unknown-linux-gnu', 'openjdk7u45', 'mpiJava', 'mpigcc', 'GCC_4.6.3'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [hwloc_topology_init] in library ['/opt/local/lib/libhwloc.a', 'libxml2.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char hwloc_topology_init(); static void _check_hwloc_topology_init() { hwloc_topology_init(); } int main() { _check_hwloc_topology_init();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -Wl,-rpath,/opt/local/lib -L/opt/local/lib -lhwloc -lxml2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lhwloc Popping language C HWLOC: DirPath not found.. skipping: /opt/local/lib64 ================================================================================ TEST checkSharedLibrary from config.packages.hwloc(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:626) TESTING: checkSharedLibrary from config.packages.hwloc(config/BuildSystem/config/package.py:626) By default we don't care about checking if the library is shared Popping language C ================================================================================ TEST alternateConfigureLibrary from config.packages.hdf5(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.hdf5(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.netcdf(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.netcdf(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.MOAB(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.MOAB(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.netcdf-cxx(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.netcdf-cxx(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.exodusii(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.exodusii(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default Pushing language C ================================================================================ TEST configureLibrary from config.packages.X(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:572) TESTING: configureLibrary from config.packages.X(config/BuildSystem/config/package.py:572) Find an installation and check if it can work with PETSc ================================================================================== Checking for a functional X Checking for library in Compiler specific search X: [] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [XSetWMName] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char XSetWMName(); static void _check_XSetWMName() { XSetWMName(); } int main() { _check_XSetWMName();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o: In function `_check_XSetWMName': conftest.c:(.text+0x4): undefined reference to `XSetWMName' Popping language C Checking for library in Compiler specific search X: ['libX11.a'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [XSetWMName] in library ['libX11.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char XSetWMName(); static void _check_XSetWMName() { XSetWMName(); } int main() { _check_XSetWMName();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -lX11 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lX11 Popping language C X: SearchDir DirPath not found.. skipping: /opt/X11 X: SearchDir DirPath not found.. skipping: /Developer/SDKs/MacOSX10.5.sdk/usr/X11 X: SearchDir DirPath not found.. skipping: /Developer/SDKs/MacOSX10.4u.sdk/usr/X11R6 X: SearchDir DirPath not found.. skipping: /usr/X11 X: SearchDir DirPath not found.. skipping: /usr/X11R6 X: SearchDir DirPath not found.. skipping: /usr/X11R5 X: SearchDir DirPath not found.. skipping: /usr/X11R4 X: SearchDir DirPath not found.. skipping: /usr/local/X11 X: SearchDir DirPath not found.. skipping: /usr/local/X11R6 X: SearchDir DirPath not found.. skipping: /usr/local/X11R5 X: SearchDir DirPath not found.. skipping: /usr/local/X11R4 X: SearchDir DirPath not found.. skipping: /usr/X386 X: SearchDir DirPath not found.. skipping: /usr/x386 X: SearchDir DirPath not found.. skipping: /usr/XFree86/X11 Checking for library in Package specific search directory X: ['/usr/local/lib/libX11.a'] Contents: ['bin', 'etc', 'games', 'include', 'lib', 'lib64', 'libexec', 'sbin', 'share', 'src'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [XSetWMName] in library ['/usr/local/lib/libX11.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char XSetWMName(); static void _check_XSetWMName() { XSetWMName(); } int main() { _check_XSetWMName();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib -L/usr/local/lib -lX11 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lX11 Popping language C Checking for library in Package specific search directory X: ['/usr/local/lib64/libX11.a'] Contents: ['bin', 'etc', 'games', 'include', 'lib', 'lib64', 'libexec', 'sbin', 'share', 'src'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [XSetWMName] in library ['/usr/local/lib64/libX11.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char XSetWMName(); static void _check_XSetWMName() { XSetWMName(); } int main() { _check_XSetWMName();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib64 -L/usr/local/lib64 -lX11 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lX11 Popping language C X: SearchDir DirPath not found.. skipping: /usr/local/x11r5 X: SearchDir DirPath not found.. skipping: /usr/lpp/Xamples X: SearchDir DirPath not found.. skipping: /usr/openwin X: SearchDir DirPath not found.. skipping: /usr/openwin/share ================================================================================ TEST checkSharedLibrary from config.packages.X(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:626) TESTING: checkSharedLibrary from config.packages.X(config/BuildSystem/config/package.py:626) By default we don't care about checking if the library is shared Popping language C ================================================================================ TEST alternateConfigureLibrary from config.packages.Triangle(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.Triangle(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.afterimage(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.afterimage(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default Pushing language C ================================================================================ TEST configureLibrary from config.packages.openmp(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/openmp.py:15) TESTING: configureLibrary from config.packages.openmp(config/BuildSystem/config/packages/openmp.py:15) Checks for -fopenmp compiler flag Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added C compiler flag -Kopenmp Popping language C Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -X9 -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.F Successful compile: Source: program main end Added FC compiler flag -Kopenmp Popping language FC Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added Cxx compiler flag -Kopenmp Popping language Cxx ================================================================================ TEST checkSharedLibrary from config.packages.openmp(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:626) TESTING: checkSharedLibrary from config.packages.openmp(config/BuildSystem/config/package.py:626) By default we don't care about checking if the library is shared Popping language C ================================================================================ TEST alternateConfigureLibrary from config.packages.saws(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.saws(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default Pushing language C ================================================================================ TEST configureLibrary from config.packages.pthread(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/pthread.py:19) TESTING: configureLibrary from config.packages.pthread(config/BuildSystem/config/packages/pthread.py:19) Checks for pthread_barrier_t, cpu_set_t, and sys/sysctl.h ================================================================================== Checking for a functional pthread Checking for library in Compiler specific search PTHREAD: [] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [pthread_create] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char pthread_create(); static void _check_pthread_create() { pthread_create(); } int main() { _check_pthread_create();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Checking for headers Compiler specific search PTHREAD: [] Pushing language C ================================================================================ TEST checkInclude from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['pthread.h'] in [] Checking include with compiler flags var CPPFLAGS [] Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/pthread.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 24 "/usr/include/pthread.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 25 "/usr/include/pthread.h" #line 1 "/usr/include/sched.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 24 "/usr/include/sched.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 27 "/usr/include/sched.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 30 "/usr/include/sched.h" #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 33 "/usr/include/sched.h" #line 1 "/usr/include/bits/sched.h" #line 36 "/usr/include/bits/sched.h" #line 64 "/usr/include/bits/sched.h" struct sched_param { int __sched_priority; }; extern int clone (int (*__fn) (void *__arg), void *__child_stack, int __flags, void *__arg, ...) ; extern int unshare (int __flags) ; extern int sched_getcpu (void) ; struct __sched_param { int __sched_priority; }; typedef unsigned long int __cpu_mask; typedef struct { __cpu_mask __bits[1024 / (8 * sizeof (__cpu_mask))]; } cpu_set_t; #line 146 "/usr/include/bits/sched.h" #line 164 "/usr/include/bits/sched.h" #line 174 "/usr/include/bits/sched.h" extern int __sched_cpucount (size_t __setsize, const cpu_set_t *__setp) ; extern cpu_set_t *__sched_cpualloc (size_t __count) ; extern void __sched_cpufree (cpu_set_t *__set) ; #line 36 "/usr/include/sched.h" extern int sched_setparam (__pid_t __pid, const struct sched_param *__param) ; extern int sched_getparam (__pid_t __pid, struct sched_param *__param) ; extern int sched_setscheduler (__pid_t __pid, int __policy, const struct sched_param *__param) ; extern int sched_getscheduler (__pid_t __pid) ; extern int sched_yield (void) ; extern int sched_get_priority_max (int __algorithm) ; extern int sched_get_priority_min (int __algorithm) ; extern int sched_rr_get_interval (__pid_t __pid, struct timespec *__t) ; #line 117 "/usr/include/sched.h" #line 26 "/usr/include/pthread.h" #line 1 "/usr/include/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 30 "/usr/include/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 40 "/usr/include/time.h" #line 1 "/usr/include/bits/time.h" #line 43 "/usr/include/bits/time.h" #line 44 "/usr/include/time.h" typedef __clock_t clock_t; typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" struct tm { int tm_sec; int tm_min; int tm_hour; int tm_mday; int tm_mon; int tm_year; int tm_wday; int tm_yday; int tm_isdst; long int tm_gmtoff; const char *tm_zone; }; struct itimerspec { struct timespec it_interval; struct timespec it_value; }; struct sigevent; typedef __pid_t pid_t; extern clock_t clock (void) ; extern time_t time (time_t *__timer) ; extern double difftime (time_t __time1, time_t __time0) ; extern time_t mktime (struct tm *__tp) ; extern size_t strftime (char * __s, size_t __maxsize, const char * __format, const struct tm * __tp) ; #line 212 "/usr/include/time.h" #line 227 "/usr/include/time.h" extern struct tm *gmtime (const time_t *__timer) ; extern struct tm *localtime (const time_t *__timer) ; extern struct tm *gmtime_r (const time_t * __timer, struct tm * __tp) ; extern struct tm *localtime_r (const time_t * __timer, struct tm * __tp) ; extern char *asctime (const struct tm *__tp) ; extern char *ctime (const time_t *__timer) ; extern char *asctime_r (const struct tm * __tp, char * __buf) ; extern char *ctime_r (const time_t * __timer, char * __buf) ; extern char *__tzname[2]; extern int __daylight; extern long int __timezone; extern char *tzname[2]; extern void tzset (void) ; extern int daylight; extern long int timezone; extern int stime (const time_t *__when) ; extern time_t timegm (struct tm *__tp) ; extern time_t timelocal (struct tm *__tp) ; extern int dysize (int __year) ; extern int nanosleep (const struct timespec *__requested_time, struct timespec *__remaining); extern int clock_getres (clockid_t __clock_id, struct timespec *__res) ; extern int clock_gettime (clockid_t __clock_id, struct timespec *__tp) ; extern int clock_settime (clockid_t __clock_id, const struct timespec *__tp) ; extern int clock_nanosleep (clockid_t __clock_id, int __flags, const struct timespec *__req, struct timespec *__rem); extern int clock_getcpuclockid (pid_t __pid, clockid_t *__clock_id) ; extern int timer_create (clockid_t __clock_id, struct sigevent * __evp, timer_t * __timerid) ; extern int timer_delete (timer_t __timerid) ; extern int timer_settime (timer_t __timerid, int __flags, const struct itimerspec * __value, struct itimerspec * __ovalue) ; extern int timer_gettime (timer_t __timerid, struct itimerspec *__value) ; extern int timer_getoverrun (timer_t __timerid) ; #line 400 "/usr/include/time.h" #line 415 "/usr/include/time.h" #line 27 "/usr/include/pthread.h" #line 1 "/usr/include/signal.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 30 "/usr/include/signal.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 34 "/usr/include/signal.h" #line 46 "/usr/include/signal.h" typedef __sigset_t sigset_t; #line 401 "/usr/include/signal.h" #line 30 "/usr/include/pthread.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 31 "/usr/include/pthread.h" #line 1 "/usr/include/bits/setjmp.h" #line 1 "/usr/include/bits/wordsize.h" #line 28 "/usr/include/bits/setjmp.h" typedef struct __sparc64_jmp_buf { struct __sparc64_jmp_buf *uc_link; unsigned long uc_flags; unsigned long uc_sigmask; struct __sparc64_jmp_buf_mcontext { unsigned long mc_gregs[53]; unsigned long mc_fp; unsigned long mc_i7; struct __sparc64_jmp_buf_fpu { union { unsigned int sregs[512]; unsigned long dregs[256]; long double qregs[128]; } mcfpu_fpregs; unsigned long mcfpu_fsr; unsigned long mcfpu_fprs; unsigned long mcfpu_gsr; unsigned long mcfpu_xasr; void *mcfpu_fq; unsigned char mcfpu_qcnt; unsigned char mcfpu_qentsz; unsigned char mcfpu_enab; } mc_fpregs; } uc_mcontext; } __jmp_buf[1]; #line 70 "/usr/include/bits/setjmp.h" #line 32 "/usr/include/pthread.h" #line 1 "/usr/include/bits/wordsize.h" #line 33 "/usr/include/pthread.h" enum { PTHREAD_CREATE_JOINABLE, PTHREAD_CREATE_DETACHED }; enum { PTHREAD_MUTEX_TIMED_NP, PTHREAD_MUTEX_RECURSIVE_NP, PTHREAD_MUTEX_ERRORCHECK_NP, PTHREAD_MUTEX_ADAPTIVE_NP #line 63 "/usr/include/pthread.h" }; #line 74 "/usr/include/pthread.h" #line 85 "/usr/include/pthread.h" #line 111 "/usr/include/pthread.h" enum { PTHREAD_RWLOCK_PREFER_READER_NP, PTHREAD_RWLOCK_PREFER_WRITER_NP, PTHREAD_RWLOCK_PREFER_WRITER_NONRECURSIVE_NP, PTHREAD_RWLOCK_DEFAULT_NP = PTHREAD_RWLOCK_PREFER_READER_NP }; #line 144 "/usr/include/pthread.h" enum { PTHREAD_INHERIT_SCHED, PTHREAD_EXPLICIT_SCHED }; enum { PTHREAD_SCOPE_SYSTEM, PTHREAD_SCOPE_PROCESS }; enum { PTHREAD_PROCESS_PRIVATE, PTHREAD_PROCESS_SHARED }; struct _pthread_cleanup_buffer { void (*__routine) (void *); void *__arg; int __canceltype; struct _pthread_cleanup_buffer *__prev; }; enum { PTHREAD_CANCEL_ENABLE, PTHREAD_CANCEL_DISABLE }; enum { PTHREAD_CANCEL_DEFERRED, PTHREAD_CANCEL_ASYNCHRONOUS }; extern int pthread_create (pthread_t * __newthread, const pthread_attr_t * __attr, void *(*__start_routine) (void *), void * __arg) ; extern void pthread_exit (void *__retval) ; extern int pthread_join (pthread_t __th, void **__thread_return); #line 258 "/usr/include/pthread.h" extern int pthread_detach (pthread_t __th) ; extern pthread_t pthread_self (void) ; extern int pthread_equal (pthread_t __thread1, pthread_t __thread2) ; extern int pthread_attr_init (pthread_attr_t *__attr) ; extern int pthread_attr_destroy (pthread_attr_t *__attr) ; extern int pthread_attr_getdetachstate (const pthread_attr_t *__attr, int *__detachstate) ; extern int pthread_attr_setdetachstate (pthread_attr_t *__attr, int __detachstate) ; extern int pthread_attr_getguardsize (const pthread_attr_t *__attr, size_t *__guardsize) ; extern int pthread_attr_setguardsize (pthread_attr_t *__attr, size_t __guardsize) ; extern int pthread_attr_getschedparam (const pthread_attr_t * __attr, struct sched_param * __param) ; extern int pthread_attr_setschedparam (pthread_attr_t * __attr, const struct sched_param * __param) ; extern int pthread_attr_getschedpolicy (const pthread_attr_t * __attr, int * __policy) ; extern int pthread_attr_setschedpolicy (pthread_attr_t *__attr, int __policy) ; extern int pthread_attr_getinheritsched (const pthread_attr_t * __attr, int * __inherit) ; extern int pthread_attr_setinheritsched (pthread_attr_t *__attr, int __inherit) ; extern int pthread_attr_getscope (const pthread_attr_t * __attr, int * __scope) ; extern int pthread_attr_setscope (pthread_attr_t *__attr, int __scope) ; extern int pthread_attr_getstackaddr (const pthread_attr_t * __attr, void ** __stackaddr) ; extern int pthread_attr_setstackaddr (pthread_attr_t *__attr, void *__stackaddr) ; extern int pthread_attr_getstacksize (const pthread_attr_t * __attr, size_t * __stacksize) ; extern int pthread_attr_setstacksize (pthread_attr_t *__attr, size_t __stacksize) ; extern int pthread_attr_getstack (const pthread_attr_t * __attr, void ** __stackaddr, size_t * __stacksize) ; extern int pthread_attr_setstack (pthread_attr_t *__attr, void *__stackaddr, size_t __stacksize) ; #line 407 "/usr/include/pthread.h" extern int pthread_setschedparam (pthread_t __target_thread, int __policy, const struct sched_param *__param) ; extern int pthread_getschedparam (pthread_t __target_thread, int * __policy, struct sched_param * __param) ; extern int pthread_setschedprio (pthread_t __target_thread, int __prio) ; #line 435 "/usr/include/pthread.h" #line 455 "/usr/include/pthread.h" extern int pthread_once (pthread_once_t *__once_control, void (*__init_routine) (void)) ; extern int pthread_setcancelstate (int __state, int *__oldstate); extern int pthread_setcanceltype (int __type, int *__oldtype); extern int pthread_cancel (pthread_t __th); extern void pthread_testcancel (void); typedef struct { struct { __jmp_buf __cancel_jmp_buf; int __mask_was_saved; } __cancel_jmp_buf[1]; void *__pad[4]; } __pthread_unwind_buf_t ; struct __pthread_cleanup_frame { void (*__cancel_routine) (void *); void *__cancel_arg; int __do_it; int __cancel_type; }; #line 629 "/usr/include/pthread.h" #line 652 "/usr/include/pthread.h" extern void __pthread_register_cancel (__pthread_unwind_buf_t *__buf) ; #line 663 "/usr/include/pthread.h" extern void __pthread_unregister_cancel (__pthread_unwind_buf_t *__buf) ; #line 701 "/usr/include/pthread.h" extern void __pthread_unwind_next (__pthread_unwind_buf_t *__buf) ; struct __jmp_buf_tag; extern int __sigsetjmp (struct __jmp_buf_tag *__env, int __savemask) ; extern int pthread_mutex_init (pthread_mutex_t *__mutex, const pthread_mutexattr_t *__mutexattr) ; extern int pthread_mutex_destroy (pthread_mutex_t *__mutex) ; extern int pthread_mutex_trylock (pthread_mutex_t *__mutex) ; extern int pthread_mutex_lock (pthread_mutex_t *__mutex) ; extern int pthread_mutex_timedlock (pthread_mutex_t * __mutex, const struct timespec * __abstime) ; extern int pthread_mutex_unlock (pthread_mutex_t *__mutex) ; #line 761 "/usr/include/pthread.h" extern int pthread_mutexattr_init (pthread_mutexattr_t *__attr) ; extern int pthread_mutexattr_destroy (pthread_mutexattr_t *__attr) ; extern int pthread_mutexattr_getpshared (const pthread_mutexattr_t * __attr, int * __pshared) ; extern int pthread_mutexattr_setpshared (pthread_mutexattr_t *__attr, int __pshared) ; #line 827 "/usr/include/pthread.h" #line 839 "/usr/include/pthread.h" extern int pthread_rwlock_init (pthread_rwlock_t * __rwlock, const pthread_rwlockattr_t * __attr) ; extern int pthread_rwlock_destroy (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlock_rdlock (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlock_tryrdlock (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlock_timedrdlock (pthread_rwlock_t * __rwlock, const struct timespec * __abstime) ; extern int pthread_rwlock_wrlock (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlock_trywrlock (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlock_timedwrlock (pthread_rwlock_t * __rwlock, const struct timespec * __abstime) ; extern int pthread_rwlock_unlock (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlockattr_init (pthread_rwlockattr_t *__attr) ; extern int pthread_rwlockattr_destroy (pthread_rwlockattr_t *__attr) ; extern int pthread_rwlockattr_getpshared (const pthread_rwlockattr_t * __attr, int * __pshared) ; extern int pthread_rwlockattr_setpshared (pthread_rwlockattr_t *__attr, int __pshared) ; extern int pthread_rwlockattr_getkind_np (const pthread_rwlockattr_t * __attr, int * __pref) ; extern int pthread_rwlockattr_setkind_np (pthread_rwlockattr_t *__attr, int __pref) ; extern int pthread_cond_init (pthread_cond_t * __cond, const pthread_condattr_t * __cond_attr) ; extern int pthread_cond_destroy (pthread_cond_t *__cond) ; extern int pthread_cond_signal (pthread_cond_t *__cond) ; extern int pthread_cond_broadcast (pthread_cond_t *__cond) ; extern int pthread_cond_wait (pthread_cond_t * __cond, pthread_mutex_t * __mutex) ; extern int pthread_cond_timedwait (pthread_cond_t * __cond, pthread_mutex_t * __mutex, const struct timespec * __abstime) ; extern int pthread_condattr_init (pthread_condattr_t *__attr) ; extern int pthread_condattr_destroy (pthread_condattr_t *__attr) ; extern int pthread_condattr_getpshared (const pthread_condattr_t * __attr, int * __pshared) ; extern int pthread_condattr_setpshared (pthread_condattr_t *__attr, int __pshared) ; extern int pthread_condattr_getclock (const pthread_condattr_t * __attr, __clockid_t * __clock_id) ; extern int pthread_condattr_setclock (pthread_condattr_t *__attr, __clockid_t __clock_id) ; extern int pthread_spin_init (pthread_spinlock_t *__lock, int __pshared) ; extern int pthread_spin_destroy (pthread_spinlock_t *__lock) ; extern int pthread_spin_lock (pthread_spinlock_t *__lock) ; extern int pthread_spin_trylock (pthread_spinlock_t *__lock) ; extern int pthread_spin_unlock (pthread_spinlock_t *__lock) ; extern int pthread_barrier_init (pthread_barrier_t * __barrier, const pthread_barrierattr_t * __attr, unsigned int __count) ; extern int pthread_barrier_destroy (pthread_barrier_t *__barrier) ; extern int pthread_barrier_wait (pthread_barrier_t *__barrier) ; extern int pthread_barrierattr_init (pthread_barrierattr_t *__attr) ; extern int pthread_barrierattr_destroy (pthread_barrierattr_t *__attr) ; extern int pthread_barrierattr_getpshared (const pthread_barrierattr_t * __attr, int * __pshared) ; extern int pthread_barrierattr_setpshared (pthread_barrierattr_t *__attr, int __pshared) ; extern int pthread_key_create (pthread_key_t *__key, void (*__destr_function) (void *)) ; extern int pthread_key_delete (pthread_key_t __key) ; extern void *pthread_getspecific (pthread_key_t __key) ; extern int pthread_setspecific (pthread_key_t __key, const void *__pointer) ; extern int pthread_getcpuclockid (pthread_t __thread_id, __clockid_t *__clock_id) ; extern int pthread_atfork (void (*__prepare) (void), void (*__parent) (void), void (*__child) (void)) ; #line 1116 "/usr/include/pthread.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Found header files ['pthread.h'] in [] Popping language C All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread/conftest.c", line 6: warning: variable "a" was declared but never referenced pthread_barrier_t *a; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { pthread_barrier_t *a; ; return 0; } Defined "HAVE_PTHREAD_BARRIER_T" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread/conftest.c", line 6: warning: variable "a" was declared but never referenced cpu_set_t *a; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { cpu_set_t *a; ; return 0; } Defined "HAVE_SCHED_CPU_SET_T" to "1" Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread/conftest.c" #line 1 "/usr/include/sys/sysctl.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/sys/sysctl.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 25 "/usr/include/sys/sysctl.h" #line 43 "/usr/include/sys/sysctl.h" #line 1 "/usr/include/linux/sysctl.h" #line 1 "/usr/include/linux/kernel.h" #line 29 "/usr/include/linux/sysctl.h" #line 1 "/usr/include/linux/types.h" #line 30 "/usr/include/linux/sysctl.h" struct file; struct completion; struct __sysctl_args { int *name; int nlen; void *oldval; size_t *oldlenp; void *newval; size_t newlen; unsigned long __unused[4]; }; enum { CTL_KERN=1, CTL_VM=2, CTL_NET=3, CTL_PROC=4, CTL_FS=5, CTL_DEBUG=6, CTL_DEV=7, CTL_BUS=8, CTL_ABI=9, CTL_CPU=10, CTL_ARLAN=254, CTL_S390DBF=5677, CTL_SUNRPC=7249, CTL_PM=9899, CTL_FRV=9898, }; enum { CTL_BUS_ISA=1 }; enum { INOTIFY_MAX_USER_INSTANCES=1, INOTIFY_MAX_USER_WATCHES=2, INOTIFY_MAX_QUEUED_EVENTS=3 }; enum { KERN_OSTYPE=1, KERN_OSRELEASE=2, KERN_OSREV=3, KERN_VERSION=4, KERN_SECUREMASK=5, KERN_PROF=6, KERN_NODENAME=7, KERN_DOMAINNAME=8, KERN_PANIC=15, KERN_REALROOTDEV=16, KERN_SPARC_REBOOT=21, KERN_CTLALTDEL=22, KERN_PRINTK=23, KERN_NAMETRANS=24, KERN_PPC_HTABRECLAIM=25, KERN_PPC_ZEROPAGED=26, KERN_PPC_POWERSAVE_NAP=27, KERN_MODPROBE=28, KERN_SG_BIG_BUFF=29, KERN_ACCT=30, KERN_PPC_L2CR=31, KERN_RTSIGNR=32, KERN_RTSIGMAX=33, KERN_SHMMAX=34, KERN_MSGMAX=35, KERN_MSGMNB=36, KERN_MSGPOOL=37, KERN_SYSRQ=38, KERN_MAX_THREADS=39, KERN_RANDOM=40, KERN_SHMALL=41, KERN_MSGMNI=42, KERN_SEM=43, KERN_SPARC_STOP_A=44, KERN_SHMMNI=45, KERN_OVERFLOWUID=46, KERN_OVERFLOWGID=47, KERN_SHMPATH=48, KERN_HOTPLUG=49, KERN_IEEE_EMULATION_WARNINGS=50, KERN_S390_USER_DEBUG_LOGGING=51, KERN_CORE_USES_PID=52, KERN_TAINTED=53, KERN_CADPID=54, KERN_PIDMAX=55, KERN_CORE_PATTERN=56, KERN_PANIC_ON_OOPS=57, KERN_HPPA_PWRSW=58, KERN_HPPA_UNALIGNED=59, KERN_PRINTK_RATELIMIT=60, KERN_PRINTK_RATELIMIT_BURST=61, KERN_PTY=62, KERN_NGROUPS_MAX=63, KERN_SPARC_SCONS_PWROFF=64, KERN_HZ_TIMER=65, KERN_UNKNOWN_NMI_PANIC=66, KERN_BOOTLOADER_TYPE=67, KERN_RANDOMIZE=68, KERN_SETUID_DUMPABLE=69, KERN_SPIN_RETRY=70, KERN_ACPI_VIDEO_FLAGS=71, KERN_IA64_UNALIGNED=72, KERN_COMPAT_LOG=73, KERN_MAX_LOCK_DEPTH=74, KERN_NMI_WATCHDOG=75, KERN_PANIC_ON_NMI=76, }; enum { VM_UNUSED1=1, VM_UNUSED2=2, VM_UNUSED3=3, VM_UNUSED4=4, VM_OVERCOMMIT_MEMORY=5, VM_UNUSED5=6, VM_UNUSED7=7, VM_UNUSED8=8, VM_UNUSED9=9, VM_PAGE_CLUSTER=10, VM_DIRTY_BACKGROUND=11, VM_DIRTY_RATIO=12, VM_DIRTY_WB_CS=13, VM_DIRTY_EXPIRE_CS=14, VM_NR_PDFLUSH_THREADS=15, VM_OVERCOMMIT_RATIO=16, VM_PAGEBUF=17, VM_HUGETLB_PAGES=18, VM_SWAPPINESS=19, VM_LOWMEM_RESERVE_RATIO=20, VM_MIN_FREE_KBYTES=21, VM_MAX_MAP_COUNT=22, VM_LAPTOP_MODE=23, VM_BLOCK_DUMP=24, VM_HUGETLB_GROUP=25, VM_VFS_CACHE_PRESSURE=26, VM_LEGACY_VA_LAYOUT=27, VM_SWAP_TOKEN_TIMEOUT=28, VM_DROP_PAGECACHE=29, VM_PERCPU_PAGELIST_FRACTION=30, VM_ZONE_RECLAIM_MODE=31, VM_MIN_UNMAPPED=32, VM_PANIC_ON_OOM=33, VM_VDSO_ENABLED=34, VM_MIN_SLAB=35, VM_MPG_CTL=36, }; enum mpg_proc_type { MPG_CTL_TOTAL_BYTES = 1, }; enum { NET_CORE=1, NET_ETHER=2, NET_802=3, NET_UNIX=4, NET_IPV4=5, NET_IPX=6, NET_ATALK=7, NET_NETROM=8, NET_AX25=9, NET_BRIDGE=10, NET_ROSE=11, NET_IPV6=12, NET_X25=13, NET_TR=14, NET_DECNET=15, NET_ECONET=16, NET_SCTP=17, NET_LLC=18, NET_NETFILTER=19, NET_DCCP=20, NET_IRDA=412, }; enum { RANDOM_POOLSIZE=1, RANDOM_ENTROPY_COUNT=2, RANDOM_READ_THRESH=3, RANDOM_WRITE_THRESH=4, RANDOM_BOOT_ID=5, RANDOM_UUID=6 }; enum { PTY_MAX=1, PTY_NR=2 }; enum { BUS_ISA_MEM_BASE=1, BUS_ISA_PORT_BASE=2, BUS_ISA_PORT_SHIFT=3 }; enum { NET_CORE_WMEM_MAX=1, NET_CORE_RMEM_MAX=2, NET_CORE_WMEM_DEFAULT=3, NET_CORE_RMEM_DEFAULT=4, NET_CORE_MAX_BACKLOG=6, NET_CORE_FASTROUTE=7, NET_CORE_MSG_COST=8, NET_CORE_MSG_BURST=9, NET_CORE_OPTMEM_MAX=10, NET_CORE_HOT_LIST_LENGTH=11, NET_CORE_DIVERT_VERSION=12, NET_CORE_NO_CONG_THRESH=13, NET_CORE_NO_CONG=14, NET_CORE_LO_CONG=15, NET_CORE_MOD_CONG=16, NET_CORE_DEV_WEIGHT=17, NET_CORE_SOMAXCONN=18, NET_CORE_BUDGET=19, NET_CORE_AEVENT_ETIME=20, NET_CORE_AEVENT_RSEQTH=21, NET_CORE_WARNINGS=22, }; enum { NET_UNIX_DESTROY_DELAY=1, NET_UNIX_DELETE_DELAY=2, NET_UNIX_MAX_DGRAM_QLEN=3, }; enum { NET_NF_CONNTRACK_MAX=1, NET_NF_CONNTRACK_TCP_TIMEOUT_SYN_SENT=2, NET_NF_CONNTRACK_TCP_TIMEOUT_SYN_RECV=3, NET_NF_CONNTRACK_TCP_TIMEOUT_ESTABLISHED=4, NET_NF_CONNTRACK_TCP_TIMEOUT_FIN_WAIT=5, NET_NF_CONNTRACK_TCP_TIMEOUT_CLOSE_WAIT=6, NET_NF_CONNTRACK_TCP_TIMEOUT_LAST_ACK=7, NET_NF_CONNTRACK_TCP_TIMEOUT_TIME_WAIT=8, NET_NF_CONNTRACK_TCP_TIMEOUT_CLOSE=9, NET_NF_CONNTRACK_UDP_TIMEOUT=10, NET_NF_CONNTRACK_UDP_TIMEOUT_STREAM=11, NET_NF_CONNTRACK_ICMP_TIMEOUT=12, NET_NF_CONNTRACK_GENERIC_TIMEOUT=13, NET_NF_CONNTRACK_BUCKETS=14, NET_NF_CONNTRACK_LOG_INVALID=15, NET_NF_CONNTRACK_TCP_TIMEOUT_MAX_RETRANS=16, NET_NF_CONNTRACK_TCP_LOOSE=17, NET_NF_CONNTRACK_TCP_BE_LIBERAL=18, NET_NF_CONNTRACK_TCP_MAX_RETRANS=19, NET_NF_CONNTRACK_SCTP_TIMEOUT_CLOSED=20, NET_NF_CONNTRACK_SCTP_TIMEOUT_COOKIE_WAIT=21, NET_NF_CONNTRACK_SCTP_TIMEOUT_COOKIE_ECHOED=22, NET_NF_CONNTRACK_SCTP_TIMEOUT_ESTABLISHED=23, NET_NF_CONNTRACK_SCTP_TIMEOUT_SHUTDOWN_SENT=24, NET_NF_CONNTRACK_SCTP_TIMEOUT_SHUTDOWN_RECD=25, NET_NF_CONNTRACK_SCTP_TIMEOUT_SHUTDOWN_ACK_SENT=26, NET_NF_CONNTRACK_COUNT=27, NET_NF_CONNTRACK_ICMPV6_TIMEOUT=28, NET_NF_CONNTRACK_FRAG6_TIMEOUT=29, NET_NF_CONNTRACK_FRAG6_LOW_THRESH=30, NET_NF_CONNTRACK_FRAG6_HIGH_THRESH=31, NET_NF_CONNTRACK_CHECKSUM=32, }; enum { NET_IPV4_FORWARD=8, NET_IPV4_DYNADDR=9, NET_IPV4_CONF=16, NET_IPV4_NEIGH=17, NET_IPV4_ROUTE=18, NET_IPV4_FIB_HASH=19, NET_IPV4_NETFILTER=20, NET_IPV4_TCP_TIMESTAMPS=33, NET_IPV4_TCP_WINDOW_SCALING=34, NET_IPV4_TCP_SACK=35, NET_IPV4_TCP_RETRANS_COLLAPSE=36, NET_IPV4_DEFAULT_TTL=37, NET_IPV4_AUTOCONFIG=38, NET_IPV4_NO_PMTU_DISC=39, NET_IPV4_TCP_SYN_RETRIES=40, NET_IPV4_IPFRAG_HIGH_THRESH=41, NET_IPV4_IPFRAG_LOW_THRESH=42, NET_IPV4_IPFRAG_TIME=43, NET_IPV4_TCP_MAX_KA_PROBES=44, NET_IPV4_TCP_KEEPALIVE_TIME=45, NET_IPV4_TCP_KEEPALIVE_PROBES=46, NET_IPV4_TCP_RETRIES1=47, NET_IPV4_TCP_RETRIES2=48, NET_IPV4_TCP_FIN_TIMEOUT=49, NET_IPV4_IP_MASQ_DEBUG=50, NET_TCP_SYNCOOKIES=51, NET_TCP_STDURG=52, NET_TCP_RFC1337=53, NET_TCP_SYN_TAILDROP=54, NET_TCP_MAX_SYN_BACKLOG=55, NET_IPV4_LOCAL_PORT_RANGE=56, NET_IPV4_ICMP_ECHO_IGNORE_ALL=57, NET_IPV4_ICMP_ECHO_IGNORE_BROADCASTS=58, NET_IPV4_ICMP_SOURCEQUENCH_RATE=59, NET_IPV4_ICMP_DESTUNREACH_RATE=60, NET_IPV4_ICMP_TIMEEXCEED_RATE=61, NET_IPV4_ICMP_PARAMPROB_RATE=62, NET_IPV4_ICMP_ECHOREPLY_RATE=63, NET_IPV4_ICMP_IGNORE_BOGUS_ERROR_RESPONSES=64, NET_IPV4_IGMP_MAX_MEMBERSHIPS=65, NET_TCP_TW_RECYCLE=66, NET_IPV4_ALWAYS_DEFRAG=67, NET_IPV4_TCP_KEEPALIVE_INTVL=68, NET_IPV4_INET_PEER_THRESHOLD=69, NET_IPV4_INET_PEER_MINTTL=70, NET_IPV4_INET_PEER_MAXTTL=71, NET_IPV4_INET_PEER_GC_MINTIME=72, NET_IPV4_INET_PEER_GC_MAXTIME=73, NET_TCP_ORPHAN_RETRIES=74, NET_TCP_ABORT_ON_OVERFLOW=75, NET_TCP_SYNACK_RETRIES=76, NET_TCP_MAX_ORPHANS=77, NET_TCP_MAX_TW_BUCKETS=78, NET_TCP_FACK=79, NET_TCP_REORDERING=80, NET_TCP_ECN=81, NET_TCP_DSACK=82, NET_TCP_MEM=83, NET_TCP_WMEM=84, NET_TCP_RMEM=85, NET_TCP_APP_WIN=86, NET_TCP_ADV_WIN_SCALE=87, NET_IPV4_NONLOCAL_BIND=88, NET_IPV4_ICMP_RATELIMIT=89, NET_IPV4_ICMP_RATEMASK=90, NET_TCP_TW_REUSE=91, NET_TCP_FRTO=92, NET_TCP_LOW_LATENCY=93, NET_IPV4_IPFRAG_SECRET_INTERVAL=94, NET_IPV4_IGMP_MAX_MSF=96, NET_TCP_NO_METRICS_SAVE=97, NET_TCP_DEFAULT_WIN_SCALE=105, NET_TCP_MODERATE_RCVBUF=106, NET_TCP_TSO_WIN_DIVISOR=107, NET_TCP_BIC_BETA=108, NET_IPV4_ICMP_ERRORS_USE_INBOUND_IFADDR=109, NET_TCP_CONG_CONTROL=110, NET_TCP_ABC=111, NET_IPV4_IPFRAG_MAX_DIST=112, NET_TCP_MTU_PROBING=113, NET_TCP_BASE_MSS=114, NET_IPV4_TCP_WORKAROUND_SIGNED_WINDOWS=115, NET_TCP_DMA_COPYBREAK=116, NET_TCP_SLOW_START_AFTER_IDLE=117, NET_CIPSOV4_CACHE_ENABLE=118, NET_CIPSOV4_CACHE_BUCKET_SIZE=119, NET_CIPSOV4_RBM_OPTFMT=120, NET_CIPSOV4_RBM_STRICTVALID=121, NET_TCP_AVAIL_CONG_CONTROL=122, NET_TCP_ALLOWED_CONG_CONTROL=123, NET_TCP_MAX_SSTHRESH=124, NET_TCP_FRTO_RESPONSE=125, }; enum { NET_IPV4_ROUTE_FLUSH=1, NET_IPV4_ROUTE_MIN_DELAY=2, NET_IPV4_ROUTE_MAX_DELAY=3, NET_IPV4_ROUTE_GC_THRESH=4, NET_IPV4_ROUTE_MAX_SIZE=5, NET_IPV4_ROUTE_GC_MIN_INTERVAL=6, NET_IPV4_ROUTE_GC_TIMEOUT=7, NET_IPV4_ROUTE_GC_INTERVAL=8, NET_IPV4_ROUTE_REDIRECT_LOAD=9, NET_IPV4_ROUTE_REDIRECT_NUMBER=10, NET_IPV4_ROUTE_REDIRECT_SILENCE=11, NET_IPV4_ROUTE_ERROR_COST=12, NET_IPV4_ROUTE_ERROR_BURST=13, NET_IPV4_ROUTE_GC_ELASTICITY=14, NET_IPV4_ROUTE_MTU_EXPIRES=15, NET_IPV4_ROUTE_MIN_PMTU=16, NET_IPV4_ROUTE_MIN_ADVMSS=17, NET_IPV4_ROUTE_SECRET_INTERVAL=18, NET_IPV4_ROUTE_GC_MIN_INTERVAL_MS=19, }; enum { NET_PROTO_CONF_ALL=-2, NET_PROTO_CONF_DEFAULT=-3 }; enum { NET_IPV4_CONF_FORWARDING=1, NET_IPV4_CONF_MC_FORWARDING=2, NET_IPV4_CONF_PROXY_ARP=3, NET_IPV4_CONF_ACCEPT_REDIRECTS=4, NET_IPV4_CONF_SECURE_REDIRECTS=5, NET_IPV4_CONF_SEND_REDIRECTS=6, NET_IPV4_CONF_SHARED_MEDIA=7, NET_IPV4_CONF_RP_FILTER=8, NET_IPV4_CONF_ACCEPT_SOURCE_ROUTE=9, NET_IPV4_CONF_BOOTP_RELAY=10, NET_IPV4_CONF_LOG_MARTIANS=11, NET_IPV4_CONF_TAG=12, NET_IPV4_CONF_ARPFILTER=13, NET_IPV4_CONF_MEDIUM_ID=14, NET_IPV4_CONF_NOXFRM=15, NET_IPV4_CONF_NOPOLICY=16, NET_IPV4_CONF_FORCE_IGMP_VERSION=17, NET_IPV4_CONF_ARP_ANNOUNCE=18, NET_IPV4_CONF_ARP_IGNORE=19, NET_IPV4_CONF_PROMOTE_SECONDARIES=20, NET_IPV4_CONF_ARP_ACCEPT=21, __NET_IPV4_CONF_MAX }; enum { NET_IPV4_NF_CONNTRACK_MAX=1, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_SYN_SENT=2, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_SYN_RECV=3, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_ESTABLISHED=4, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_FIN_WAIT=5, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_CLOSE_WAIT=6, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_LAST_ACK=7, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_TIME_WAIT=8, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_CLOSE=9, NET_IPV4_NF_CONNTRACK_UDP_TIMEOUT=10, NET_IPV4_NF_CONNTRACK_UDP_TIMEOUT_STREAM=11, NET_IPV4_NF_CONNTRACK_ICMP_TIMEOUT=12, NET_IPV4_NF_CONNTRACK_GENERIC_TIMEOUT=13, NET_IPV4_NF_CONNTRACK_BUCKETS=14, NET_IPV4_NF_CONNTRACK_LOG_INVALID=15, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_MAX_RETRANS=16, NET_IPV4_NF_CONNTRACK_TCP_LOOSE=17, NET_IPV4_NF_CONNTRACK_TCP_BE_LIBERAL=18, NET_IPV4_NF_CONNTRACK_TCP_MAX_RETRANS=19, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_CLOSED=20, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_COOKIE_WAIT=21, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_COOKIE_ECHOED=22, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_ESTABLISHED=23, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_SHUTDOWN_SENT=24, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_SHUTDOWN_RECD=25, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_SHUTDOWN_ACK_SENT=26, NET_IPV4_NF_CONNTRACK_COUNT=27, NET_IPV4_NF_CONNTRACK_CHECKSUM=28, }; enum { NET_IPV6_CONF=16, NET_IPV6_NEIGH=17, NET_IPV6_ROUTE=18, NET_IPV6_ICMP=19, NET_IPV6_BINDV6ONLY=20, NET_IPV6_IP6FRAG_HIGH_THRESH=21, NET_IPV6_IP6FRAG_LOW_THRESH=22, NET_IPV6_IP6FRAG_TIME=23, NET_IPV6_IP6FRAG_SECRET_INTERVAL=24, NET_IPV6_MLD_MAX_MSF=25, }; enum { NET_IPV6_ROUTE_FLUSH=1, NET_IPV6_ROUTE_GC_THRESH=2, NET_IPV6_ROUTE_MAX_SIZE=3, NET_IPV6_ROUTE_GC_MIN_INTERVAL=4, NET_IPV6_ROUTE_GC_TIMEOUT=5, NET_IPV6_ROUTE_GC_INTERVAL=6, NET_IPV6_ROUTE_GC_ELASTICITY=7, NET_IPV6_ROUTE_MTU_EXPIRES=8, NET_IPV6_ROUTE_MIN_ADVMSS=9, NET_IPV6_ROUTE_GC_MIN_INTERVAL_MS=10 }; enum { NET_IPV6_FORWARDING=1, NET_IPV6_HOP_LIMIT=2, NET_IPV6_MTU=3, NET_IPV6_ACCEPT_RA=4, NET_IPV6_ACCEPT_REDIRECTS=5, NET_IPV6_AUTOCONF=6, NET_IPV6_DAD_TRANSMITS=7, NET_IPV6_RTR_SOLICITS=8, NET_IPV6_RTR_SOLICIT_INTERVAL=9, NET_IPV6_RTR_SOLICIT_DELAY=10, NET_IPV6_USE_TEMPADDR=11, NET_IPV6_TEMP_VALID_LFT=12, NET_IPV6_TEMP_PREFERED_LFT=13, NET_IPV6_REGEN_MAX_RETRY=14, NET_IPV6_MAX_DESYNC_FACTOR=15, NET_IPV6_MAX_ADDRESSES=16, NET_IPV6_FORCE_MLD_VERSION=17, NET_IPV6_ACCEPT_RA_DEFRTR=18, NET_IPV6_ACCEPT_RA_PINFO=19, NET_IPV6_ACCEPT_RA_RTR_PREF=20, NET_IPV6_RTR_PROBE_INTERVAL=21, NET_IPV6_ACCEPT_RA_RT_INFO_MAX_PLEN=22, NET_IPV6_PROXY_NDP=23, NET_IPV6_ACCEPT_SOURCE_ROUTE=25, __NET_IPV6_MAX }; enum { NET_IPV6_ICMP_RATELIMIT=1 }; enum { NET_NEIGH_MCAST_SOLICIT=1, NET_NEIGH_UCAST_SOLICIT=2, NET_NEIGH_APP_SOLICIT=3, NET_NEIGH_RETRANS_TIME=4, NET_NEIGH_REACHABLE_TIME=5, NET_NEIGH_DELAY_PROBE_TIME=6, NET_NEIGH_GC_STALE_TIME=7, NET_NEIGH_UNRES_QLEN=8, NET_NEIGH_PROXY_QLEN=9, NET_NEIGH_ANYCAST_DELAY=10, NET_NEIGH_PROXY_DELAY=11, NET_NEIGH_LOCKTIME=12, NET_NEIGH_GC_INTERVAL=13, NET_NEIGH_GC_THRESH1=14, NET_NEIGH_GC_THRESH2=15, NET_NEIGH_GC_THRESH3=16, NET_NEIGH_RETRANS_TIME_MS=17, NET_NEIGH_REACHABLE_TIME_MS=18, __NET_NEIGH_MAX }; enum { NET_DCCP_DEFAULT=1, }; enum { NET_IPX_PPROP_BROADCASTING=1, NET_IPX_FORWARDING=2 }; enum { NET_LLC2=1, NET_LLC_STATION=2, }; enum { NET_LLC2_TIMEOUT=1, }; enum { NET_LLC_STATION_ACK_TIMEOUT=1, }; enum { NET_LLC2_ACK_TIMEOUT=1, NET_LLC2_P_TIMEOUT=2, NET_LLC2_REJ_TIMEOUT=3, NET_LLC2_BUSY_TIMEOUT=4, }; enum { NET_ATALK_AARP_EXPIRY_TIME=1, NET_ATALK_AARP_TICK_TIME=2, NET_ATALK_AARP_RETRANSMIT_LIMIT=3, NET_ATALK_AARP_RESOLVE_TIME=4 }; enum { NET_NETROM_DEFAULT_PATH_QUALITY=1, NET_NETROM_OBSOLESCENCE_COUNT_INITIALISER=2, NET_NETROM_NETWORK_TTL_INITIALISER=3, NET_NETROM_TRANSPORT_TIMEOUT=4, NET_NETROM_TRANSPORT_MAXIMUM_TRIES=5, NET_NETROM_TRANSPORT_ACKNOWLEDGE_DELAY=6, NET_NETROM_TRANSPORT_BUSY_DELAY=7, NET_NETROM_TRANSPORT_REQUESTED_WINDOW_SIZE=8, NET_NETROM_TRANSPORT_NO_ACTIVITY_TIMEOUT=9, NET_NETROM_ROUTING_CONTROL=10, NET_NETROM_LINK_FAILS_COUNT=11, NET_NETROM_RESET=12 }; enum { NET_AX25_IP_DEFAULT_MODE=1, NET_AX25_DEFAULT_MODE=2, NET_AX25_BACKOFF_TYPE=3, NET_AX25_CONNECT_MODE=4, NET_AX25_STANDARD_WINDOW=5, NET_AX25_EXTENDED_WINDOW=6, NET_AX25_T1_TIMEOUT=7, NET_AX25_T2_TIMEOUT=8, NET_AX25_T3_TIMEOUT=9, NET_AX25_IDLE_TIMEOUT=10, NET_AX25_N2=11, NET_AX25_PACLEN=12, NET_AX25_PROTOCOL=13, NET_AX25_DAMA_SLAVE_TIMEOUT=14 }; enum { NET_ROSE_RESTART_REQUEST_TIMEOUT=1, NET_ROSE_CALL_REQUEST_TIMEOUT=2, NET_ROSE_RESET_REQUEST_TIMEOUT=3, NET_ROSE_CLEAR_REQUEST_TIMEOUT=4, NET_ROSE_ACK_HOLD_BACK_TIMEOUT=5, NET_ROSE_ROUTING_CONTROL=6, NET_ROSE_LINK_FAIL_TIMEOUT=7, NET_ROSE_MAX_VCS=8, NET_ROSE_WINDOW_SIZE=9, NET_ROSE_NO_ACTIVITY_TIMEOUT=10 }; enum { NET_X25_RESTART_REQUEST_TIMEOUT=1, NET_X25_CALL_REQUEST_TIMEOUT=2, NET_X25_RESET_REQUEST_TIMEOUT=3, NET_X25_CLEAR_REQUEST_TIMEOUT=4, NET_X25_ACK_HOLD_BACK_TIMEOUT=5, NET_X25_FORWARD=6 }; enum { NET_TR_RIF_TIMEOUT=1 }; enum { NET_DECNET_NODE_TYPE = 1, NET_DECNET_NODE_ADDRESS = 2, NET_DECNET_NODE_NAME = 3, NET_DECNET_DEFAULT_DEVICE = 4, NET_DECNET_TIME_WAIT = 5, NET_DECNET_DN_COUNT = 6, NET_DECNET_DI_COUNT = 7, NET_DECNET_DR_COUNT = 8, NET_DECNET_DST_GC_INTERVAL = 9, NET_DECNET_CONF = 10, NET_DECNET_NO_FC_MAX_CWND = 11, NET_DECNET_MEM = 12, NET_DECNET_RMEM = 13, NET_DECNET_WMEM = 14, NET_DECNET_DEBUG_LEVEL = 255 }; enum { NET_DECNET_CONF_LOOPBACK = -2, NET_DECNET_CONF_DDCMP = -3, NET_DECNET_CONF_PPP = -4, NET_DECNET_CONF_X25 = -5, NET_DECNET_CONF_GRE = -6, NET_DECNET_CONF_ETHER = -7 }; enum { NET_DECNET_CONF_DEV_PRIORITY = 1, NET_DECNET_CONF_DEV_T1 = 2, NET_DECNET_CONF_DEV_T2 = 3, NET_DECNET_CONF_DEV_T3 = 4, NET_DECNET_CONF_DEV_FORWARDING = 5, NET_DECNET_CONF_DEV_BLKSIZE = 6, NET_DECNET_CONF_DEV_STATE = 7 }; enum { NET_SCTP_RTO_INITIAL = 1, NET_SCTP_RTO_MIN = 2, NET_SCTP_RTO_MAX = 3, NET_SCTP_RTO_ALPHA = 4, NET_SCTP_RTO_BETA = 5, NET_SCTP_VALID_COOKIE_LIFE = 6, NET_SCTP_ASSOCIATION_MAX_RETRANS = 7, NET_SCTP_PATH_MAX_RETRANS = 8, NET_SCTP_MAX_INIT_RETRANSMITS = 9, NET_SCTP_HB_INTERVAL = 10, NET_SCTP_PRESERVE_ENABLE = 11, NET_SCTP_MAX_BURST = 12, NET_SCTP_ADDIP_ENABLE = 13, NET_SCTP_PRSCTP_ENABLE = 14, NET_SCTP_SNDBUF_POLICY = 15, NET_SCTP_SACK_TIMEOUT = 16, NET_SCTP_RCVBUF_POLICY = 17, }; enum { NET_BRIDGE_NF_CALL_ARPTABLES = 1, NET_BRIDGE_NF_CALL_IPTABLES = 2, NET_BRIDGE_NF_CALL_IP6TABLES = 3, NET_BRIDGE_NF_FILTER_VLAN_TAGGED = 4, NET_BRIDGE_NF_FILTER_PPPOE_TAGGED = 5, }; enum { NET_IRDA_DISCOVERY=1, NET_IRDA_DEVNAME=2, NET_IRDA_DEBUG=3, NET_IRDA_FAST_POLL=4, NET_IRDA_DISCOVERY_SLOTS=5, NET_IRDA_DISCOVERY_TIMEOUT=6, NET_IRDA_SLOT_TIMEOUT=7, NET_IRDA_MAX_BAUD_RATE=8, NET_IRDA_MIN_TX_TURN_TIME=9, NET_IRDA_MAX_TX_DATA_SIZE=10, NET_IRDA_MAX_TX_WINDOW=11, NET_IRDA_MAX_NOREPLY_TIME=12, NET_IRDA_WARN_NOREPLY_TIME=13, NET_IRDA_LAP_KEEPALIVE_TIME=14, }; enum { FS_NRINODE=1, FS_STATINODE=2, FS_MAXINODE=3, FS_NRDQUOT=4, FS_MAXDQUOT=5, FS_NRFILE=6, FS_MAXFILE=7, FS_DENTRY=8, FS_NRSUPER=9, FS_MAXSUPER=10, FS_OVERFLOWUID=11, FS_OVERFLOWGID=12, FS_LEASES=13, FS_DIR_NOTIFY=14, FS_LEASE_TIME=15, FS_DQSTATS=16, FS_XFS=17, FS_AIO_NR=18, FS_AIO_MAX_NR=19, FS_INOTIFY=20, FS_OCFS2=988, }; enum { FS_DQ_LOOKUPS = 1, FS_DQ_DROPS = 2, FS_DQ_READS = 3, FS_DQ_WRITES = 4, FS_DQ_CACHE_HITS = 5, FS_DQ_ALLOCATED = 6, FS_DQ_FREE = 7, FS_DQ_SYNCS = 8, FS_DQ_WARNINGS = 9, }; enum { DEV_CDROM=1, DEV_HWMON=2, DEV_PARPORT=3, DEV_RAID=4, DEV_MAC_HID=5, DEV_SCSI=6, DEV_IPMI=7, }; enum { DEV_CDROM_INFO=1, DEV_CDROM_AUTOCLOSE=2, DEV_CDROM_AUTOEJECT=3, DEV_CDROM_DEBUG=4, DEV_CDROM_LOCK=5, DEV_CDROM_CHECK_MEDIA=6 }; enum { DEV_PARPORT_DEFAULT=-3 }; enum { DEV_RAID_SPEED_LIMIT_MIN=1, DEV_RAID_SPEED_LIMIT_MAX=2 }; enum { DEV_PARPORT_DEFAULT_TIMESLICE=1, DEV_PARPORT_DEFAULT_SPINTIME=2 }; enum { DEV_PARPORT_SPINTIME=1, DEV_PARPORT_BASE_ADDR=2, DEV_PARPORT_IRQ=3, DEV_PARPORT_DMA=4, DEV_PARPORT_MODES=5, DEV_PARPORT_DEVICES=6, DEV_PARPORT_AUTOPROBE=16 }; enum { DEV_PARPORT_DEVICES_ACTIVE=-3, }; enum { DEV_PARPORT_DEVICE_TIMESLICE=1, }; enum { DEV_MAC_HID_KEYBOARD_SENDS_LINUX_KEYCODES=1, DEV_MAC_HID_KEYBOARD_LOCK_KEYCODES=2, DEV_MAC_HID_MOUSE_BUTTON_EMULATION=3, DEV_MAC_HID_MOUSE_BUTTON2_KEYCODE=4, DEV_MAC_HID_MOUSE_BUTTON3_KEYCODE=5, DEV_MAC_HID_ADB_MOUSE_SENDS_KEYCODES=6 }; enum { DEV_SCSI_LOGGING_LEVEL=1, }; enum { DEV_IPMI_POWEROFF_POWERCYCLE=1, }; enum { ABI_DEFHANDLER_COFF=1, ABI_DEFHANDLER_ELF=2, ABI_DEFHANDLER_LCALL7=3, ABI_DEFHANDLER_LIBCSO=4, ABI_TRACE=5, ABI_FAKE_UTSNAME=6, }; #line 45 "/usr/include/sys/sysctl.h" #line 63 "/usr/include/sys/sysctl.h" extern int sysctl (int *__name, int __nlen, void *__oldval, size_t *__oldlenp, void *__newval, size_t __newlen) ; #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_SYSCTL_H" to "1" ================================================================================ TEST checkSharedLibrary from config.packages.pthread(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:626) TESTING: checkSharedLibrary from config.packages.pthread(config/BuildSystem/config/package.py:626) By default we don't care about checking if the library is shared Popping language C ================================================================================ TEST alternateConfigureLibrary from config.packages.mpe(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.mpe(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.papi(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.papi(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.scientificpython(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.scientificpython(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.fiat(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.fiat(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST configureScalarType from PETSc.options.scalarTypes(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/scalarTypes.py:37) TESTING: configureScalarType from PETSc.options.scalarTypes(config/PETSc/options/scalarTypes.py:37) Choose between real and complex numbers Defined "USE_SCALAR_REAL" to "1" Scalar type is real Pushing language C All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0; int a = isnormal(b); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest.o: In function `main': conftest.c:(.text+0x2c): undefined reference to `isnormal' Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0; int a = isnan(b); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_ISNAN" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0; int a = isinf(b); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_ISINF" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0;int a = _isnan(b); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest.o: In function `main': conftest.c:(.text+0x2c): undefined reference to `_isnan' Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0;int a = _finite(b); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest.o: In function `main': conftest.c:(.text+0x2c): undefined reference to `_finite' Popping language C ================================================================================ TEST configurePrecision from PETSc.options.scalarTypes(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/scalarTypes.py:77) TESTING: configurePrecision from PETSc.options.scalarTypes(config/PETSc/options/scalarTypes.py:77) Set the default real number precision for PETSc objects Defined "USE_REAL_DOUBLE" to "1" Defined make macro "PETSC_SCALAR_SIZE" to "64" Precision is double ================================================================================ TEST alternateConfigureLibrary from config.packages.opencl(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.opencl(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.viennacl(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.viennacl(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.cuda(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.cuda(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.cusp(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.cusp(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST locateCMake from config.packages.cmake(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/cmake.py:32) TESTING: locateCMake from config.packages.cmake(config/BuildSystem/config/packages/cmake.py:32) Looking for default CMake executable Checking for program /opt/FJSVtclang/check/cmake...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/cmake...not found Checking for program /opt/kusu/bin/cmake...not found Checking for program /opt/kusu/sbin/cmake...not found Checking for program /usr/pgsql-9.0/bin/cmake...not found Checking for program /usr/local/bin/cmake...not found Checking for program /bin/cmake...not found Checking for program /usr/bin/cmake...not found Checking for program /home/hp150306/t00196/bin/cmake...not found Checking for program /home/hp150306/t00196/shortcut/cmake...not found Checking for program /opt/FJSVxosmmm/sbin/cmake...not found Checking for program /home/hp150306/t00196/cmake...not found Checking for program /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/bin/win32fe/cmake...not found ================================================================================ TEST alternateConfigureLibrary from config.packages.metis(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.metis(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.parmetis(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.parmetis(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.Zoltan(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.Zoltan(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.fblaslapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.fblaslapack(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.f2cblaslapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.f2cblaslapack(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST configureLibrary from config.packages.BlasLapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/BlasLapack.py:333) TESTING: configureLibrary from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:333) ================================================================================ Checking for a functional BLAS and LAPACK in User specified BLAS/LAPACK library ================================================================================ TEST checkLib from config.packages.BlasLapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/BlasLapack.py:100) TESTING: checkLib from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:100) Checking for BLAS and LAPACK symbols Checking for functions [ddot_] in library ['-SSL2'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot_(); static void _check_ddot_() { ddot_(); } int main() { _check_ddot_();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Checking for functions [dgetrs_] in library ['-SSL2'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgetrs_(); static void _check_dgetrs_() { dgetrs_(); } int main() { _check_dgetrs_();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Checking for functions [dgeev_] in library ['-SSL2'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgeev_(); static void _check_dgeev_() { dgeev_(); } int main() { _check_dgeev_();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Found Fortran mangling on BLAS/LAPACK which is underscore Defined "BLASLAPACK_UNDERSCORE" to "1" ================================================================================ TEST check64BitBLASIndices from config.packages.BlasLapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/BlasLapack.py:466) TESTING: check64BitBLASIndices from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:466) Check for and use 64bit integer blas ================================================================================ TEST checkESSL from config.packages.BlasLapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/BlasLapack.py:396) TESTING: checkESSL from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:396) Check for the IBM ESSL library Checking for functions [iessl] in library ['-SSL2'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char iessl(); static void _check_iessl() { iessl(); } int main() { _check_iessl();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o: In function `_check_iessl': conftest.c:(.text+0x4): undefined reference to `iessl' Popping language C ================================================================================ TEST checkPESSL from config.packages.BlasLapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/BlasLapack.py:408) TESTING: checkPESSL from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:408) Check for the IBM PESSL library - and error out - if used instead of ESSL Checking for functions [ipessl] in library ['-SSL2'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ipessl(); static void _check_ipessl() { ipessl(); } int main() { _check_ipessl();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o: In function `_check_ipessl': conftest.c:(.text+0x4): undefined reference to `ipessl' Popping language C ================================================================================ TEST checkMKL from config.packages.BlasLapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/BlasLapack.py:402) TESTING: checkMKL from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:402) Check for Intel MKL library Checking for functions [mkl_set_num_threads] in library ['-SSL2'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char mkl_set_num_threads(); static void _check_mkl_set_num_threads() { mkl_set_num_threads(); } int main() { _check_mkl_set_num_threads();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o: In function `_check_mkl_set_num_threads': conftest.c:(.text+0x4): undefined reference to `mkl_set_num_threads' Popping language C ================================================================================ TEST checkMissing from config.packages.BlasLapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/BlasLapack.py:431) TESTING: checkMissing from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:431) Check for missing LAPACK routines Checking for functions [dtrsen_ dgerfs_ dgges_ dtgsen_ dgesvd_ dgetrf_ dgetrs_ dgeev_ dgelss_ dsyev_ dsyevx_ dsygv_ dsygvx_ dpotrf_ dpotrs_ dstebz_ dpttrf_ dpttrs_ dstein_ dorgqr_ dgeqrf_ dgesv_ dhseqr_ dsteqr_] in library ['-SSL2'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dtrsen_(); static void _check_dtrsen_() { dtrsen_(); } char dgerfs_(); static void _check_dgerfs_() { dgerfs_(); } char dgges_(); static void _check_dgges_() { dgges_(); } char dtgsen_(); static void _check_dtgsen_() { dtgsen_(); } char dgesvd_(); static void _check_dgesvd_() { dgesvd_(); } char dgetrf_(); static void _check_dgetrf_() { dgetrf_(); } char dgetrs_(); static void _check_dgetrs_() { dgetrs_(); } char dgeev_(); static void _check_dgeev_() { dgeev_(); } char dgelss_(); static void _check_dgelss_() { dgelss_(); } char dsyev_(); static void _check_dsyev_() { dsyev_(); } char dsyevx_(); static void _check_dsyevx_() { dsyevx_(); } char dsygv_(); static void _check_dsygv_() { dsygv_(); } char dsygvx_(); static void _check_dsygvx_() { dsygvx_(); } char dpotrf_(); static void _check_dpotrf_() { dpotrf_(); } char dpotrs_(); static void _check_dpotrs_() { dpotrs_(); } char dstebz_(); static void _check_dstebz_() { dstebz_(); } char dpttrf_(); static void _check_dpttrf_() { dpttrf_(); } char dpttrs_(); static void _check_dpttrs_() { dpttrs_(); } char dstein_(); static void _check_dstein_() { dstein_(); } char dorgqr_(); static void _check_dorgqr_() { dorgqr_(); } char dgeqrf_(); static void _check_dgeqrf_() { dgeqrf_(); } char dgesv_(); static void _check_dgesv_() { dgesv_(); } char dhseqr_(); static void _check_dhseqr_() { dhseqr_(); } char dsteqr_(); static void _check_dsteqr_() { dsteqr_(); } int main() { _check_dtrsen_(); _check_dgerfs_(); _check_dgges_(); _check_dtgsen_(); _check_dgesvd_(); _check_dgetrf_(); _check_dgetrs_(); _check_dgeev_(); _check_dgelss_(); _check_dsyev_(); _check_dsyevx_(); _check_dsygv_(); _check_dsygvx_(); _check_dpotrf_(); _check_dpotrs_(); _check_dstebz_(); _check_dpttrf_(); _check_dpttrs_(); _check_dstein_(); _check_dorgqr_(); _check_dgeqrf_(); _check_dgesv_(); _check_dhseqr_(); _check_dsteqr_();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C ================================================================================ TEST checklsame from config.packages.BlasLapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/BlasLapack.py:444) TESTING: checklsame from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:444) Do the BLAS/LAPACK libraries have a valid lsame() function with correction binding. Lion and xcode 4.2 do not Checking for functions [lsame_] in library ['-SSL2'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char lsame_(); static void _check_lsame_() { lsame_(); } int main() { _check_lsame_();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C ================================================================================ TEST checksdotreturnsdouble from config.packages.BlasLapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/BlasLapack.py:501) TESTING: checksdotreturnsdouble from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:501) Determines if BLAS sdot routine returns a float or a double Checking if sdot() returns a float or a double Pushing language C All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *output = fopen("runtimetestoutput","w"); extern float sdot_(int*,float*,int *,float*,int*); float x1[1] = {3.0}; int one1 = 1; float sdotresult = sdot_(&one1,x1,&one1,x1,&one1); fprintf(output, " '--known-sdot-returns-double=%d',\n",(sdotresult != 9.0)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack/conftest.o -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack/conftest Popping language C Checking if snrm() returns a float or a double Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *output = fopen("runtimetestoutput","w"); extern float snrm2_(int*,float*,int*); float x2[1] = {3.0}; int one2 = 1; float normresult = snrm2_(&one2,x2,&one2); fprintf(output, " '--known-snrm2-returns-double=%d',\n",(normresult != 3.0)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack/conftest.o -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack/conftest Popping language C ================================================================================ TEST alternateConfigureLibrary from config.packages.SuperLU_MT(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.SuperLU_MT(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.pARMS(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.pARMS(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.SuiteSparse(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.SuiteSparse(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.ml(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.ml(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.spai(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.spai(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.mkl_cpardiso(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.mkl_cpardiso(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.sundials(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.sundials(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.elemental(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.elemental(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST configureRegression from PETSc.Regression(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Regression.py:33) TESTING: configureRegression from PETSc.Regression(config/PETSc/Regression.py:33) Output a file listing the jobs that should be run by the PETSc buildtest Defined make macro "TEST_RUNS" to "C Fortran SSL OPENMP Cxx F90 F90_NoComplex F2003 Fortran_NoComplex C_NoComplex" ================================================================================ TEST alternateConfigureLibrary from config.packages.PaStiX(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.PaStiX(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default Pushing language C ================================================================================ TEST configureLibrary from config.packages.scalapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:572) TESTING: configureLibrary from config.packages.scalapack(config/BuildSystem/config/package.py:572) Find an installation and check if it can work with PETSc ================================================================================== Checking for a functional scalapack Checking for library in User specified SCALAPACK libraries: ['-SCALAPACK'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [pssytrd_] in library ['-SCALAPACK'] ['-SSL2'] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char pssytrd_(); static void _check_pssytrd_() { pssytrd_(); } int main() { _check_pssytrd_();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -SCALAPACK -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Checking for headers User specified SCALAPACK libraries: [] ================================================================================ TEST checkSharedLibrary from config.packages.scalapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:626) TESTING: checkSharedLibrary from config.packages.scalapack(config/BuildSystem/config/package.py:626) By default we don't care about checking if the library is shared Popping language C ================================================================================ TEST alternateConfigureLibrary from config.packages.MUMPS(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.MUMPS(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.mkl_pardiso(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.mkl_pardiso(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.SuperLU_DIST(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.SuperLU_DIST(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.SuperLU(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.SuperLU(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.Chombo(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.Chombo(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default Checking for functions [dgels_] in library ['-SSL2'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgels_(); static void _check_dgels_() { dgels_(); } int main() { _check_dgels_();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Found dgels() in Lapack library as needed by hypre Pushing language C ================================================================================ TEST configureLibrary from config.packages.hypre(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:572) TESTING: configureLibrary from config.packages.hypre(config/BuildSystem/config/package.py:572) Find an installation and check if it can work with PETSc ================================================================================== Checking for a functional hypre Checking for library in User specified root directory HYPRE: ['/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib/libHYPRE.a', '-ltrtmetcpp', '-L/opt/FJSVpxtof/sparc64fx/lib64', '-L/opt/FJSVtclang/GM-1.2.0-20/lib64', '-L//opt/FJSVtclang/GM-1.2.0-20/lib64', '-L/opt/FJSVxosmmm/lib64', '-lmpi_cxx', '-lfjdemgl', '-lstd_mt', '-lpthread', '-lstdc++'] Contents: ['lib', 'include'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [HYPRE_IJMatrixCreate] in library ['/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib/libHYPRE.a', '-ltrtmetcpp', '-L/opt/FJSVpxtof/sparc64fx/lib64', '-L/opt/FJSVtclang/GM-1.2.0-20/lib64', '-L//opt/FJSVtclang/GM-1.2.0-20/lib64', '-L/opt/FJSVxosmmm/lib64', '-lmpi_cxx', '-lfjdemgl', '-lstd_mt', '-lpthread', '-lstdc++'] ['-SSL2'] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char HYPRE_IJMatrixCreate(); static void _check_HYPRE_IJMatrixCreate() { HYPRE_IJMatrixCreate(); } int main() { _check_HYPRE_IJMatrixCreate();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -Wl,-rpath,/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -L/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -lHYPRE -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_LIBHYPRE" to "1" Defined "HAVE_LIBTRTMETCPP" to "1" Defined "HAVE_LIBMPI_CXX" to "1" Defined "HAVE_LIBFJDEMGL" to "1" Defined "HAVE_LIBSTD_MT" to "1" Defined "HAVE_LIBPTHREAD" to "1" Defined "HAVE_LIBSTDC__" to "1" Popping language C Checking for headers User specified root directory HYPRE: ['/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include'] Pushing language C ================================================================================ TEST checkInclude from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['HYPRE.h'] in ['/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include'] Checking include with compiler flags var CPPFLAGS ['/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include', '/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu'] Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include/HYPRE.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Found header files ['HYPRE.h'] in ['/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include'] Popping language C ================================================================================ TEST checkSharedLibrary from config.packages.hypre(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:626) TESTING: checkSharedLibrary from config.packages.hypre(config/BuildSystem/config/package.py:626) By default we don't care about checking if the library is shared Popping language C ================================================================================ TEST alternateConfigureLibrary from config.packages.Trilinos(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.Trilinos(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST configureRTLDDefault from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:774) TESTING: configureRTLDDefault from PETSc.Configure(config/PETSc/Configure.py:774) All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c Possible ERROR while running compiler: exit code 512 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c", line 4: error: identifier "RTLD_DEFAULT" is undefined void *ptr = RTLD_DEFAULT; ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include void *ptr = RTLD_DEFAULT; int main() { ; return 0; } ================================================================================ TEST configurePrefetch from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:624) TESTING: configurePrefetch from PETSc.Configure(config/PETSc/Configure.py:624) Sees if there are any prefetch functions supported Executing: uname -s stdout: Linux Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c", line 3: catastrophic error: cannot open source file "xmmintrin.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { void *v = 0;_mm_prefetch((const char*)v,_MM_HINT_NTA); ; return 0; } Compile failed inside link Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c", line 3: catastrophic error: cannot open source file "xmmintrin.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { void *v = 0;_mm_prefetch(v,_MM_HINT_NTA); ; return 0; } Compile failed inside link Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { void *v = 0;__builtin_prefetch(v,0,0); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "Prefetch(a,b,c)" to "__builtin_prefetch((a),(b),(c))" Defined "PREFETCH_HINT_NTA" to "0" Defined "PREFETCH_HINT_T0" to "3" Defined "PREFETCH_HINT_T1" to "2" Defined "PREFETCH_HINT_T2" to "1" Popping language C ================================================================================ TEST configureUnused from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:685) TESTING: configureUnused from PETSc.Configure(config/PETSc/Configure.py:685) Sees if __attribute((unused)) is supported Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" __attribute((unused)) static int myfunc(__attribute((unused)) void *name){ return 1;} int main() { int i = 0; int j = myfunc(&i); typedef void* atype; __attribute((unused)) atype a; ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "UNUSED" to "__attribute((unused))" Popping language C ================================================================================ TEST configureDeprecated from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:703) TESTING: configureDeprecated from PETSc.Configure(config/PETSc/Configure.py:703) Check if __attribute((deprecated)) is supported Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c", line 3: warning: function "myfunc" was declared but never referenced __attribute((deprecated)) static int myfunc(void) { return 1;} ^ Source: #include "confdefs.h" #include "conffix.h" __attribute((deprecated)) static int myfunc(void) { return 1;} int main() { ; return 0; } Defined "DEPRECATED(why)" to "__attribute((deprecated))" Popping language C ================================================================================ TEST configureIsatty from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:697) TESTING: configureIsatty from PETSc.Configure(config/PETSc/Configure.py:697) Check if the Unix C function isatty() works correctly Actually just assumes it does not work correctly on batch systems Defined "USE_ISATTY" to "1" ================================================================================ TEST configureExpect from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:723) TESTING: configureExpect from PETSc.Configure(config/PETSc/Configure.py:723) Sees if the __builtin_expect directive is supported Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { if (__builtin_expect(0,1)) return 1;; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_BUILTIN_EXPECT" to "1" Popping language C ================================================================================ TEST configureFunctionName from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:730) TESTING: configureFunctionName from PETSc.Configure(config/PETSc/Configure.py:730) Sees if the compiler supports __func__ or a variant. Falls back on __FUNCT__ which PETSc source defines, but most users do not, thus stack traces through user code are better when the compiler's variant is used. Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { if (__func__[0] != 'm') return 1;; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Defined "FUNCTION_NAME_C" to "__func__" Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { if (__func__[0] != 'm') return 1;; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language Cxx Defined "FUNCTION_NAME_CXX" to "__func__" ================================================================================ TEST configureIntptrt from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:752) TESTING: configureIntptrt from PETSc.Configure(config/PETSc/Configure.py:752) Determine what to use for uintptr_t Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c", line 6: warning: variable "i" was declared but never referenced int x; uintptr_t i = (uintptr_t)&x;; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { int x; uintptr_t i = (uintptr_t)&x;; return 0; } Defined "UINTPTR_T" to "uintptr_t" Popping language C ================================================================================ TEST configureSolaris from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:779) TESTING: configureSolaris from PETSc.Configure(config/PETSc/Configure.py:779) Solaris specific stuff ================================================================================ TEST configureLinux from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:792) TESTING: configureLinux from PETSc.Configure(config/PETSc/Configure.py:792) Linux specific stuff Defined "HAVE_DOUBLE_ALIGN_MALLOC" to "1" ================================================================================ TEST configureWin32 from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:798) TESTING: configureWin32 from PETSc.Configure(config/PETSc/Configure.py:798) Win32 non-cygwin specific stuff Checking for functions [GetComputerName] in library ['Kernel32.lib'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c", line 4: catastrophic error: cannot open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_GetComputerName() { GetComputerName(NULL,NULL);; } int main() { _check_GetComputerName();; return 0; } Compile failed inside link Popping language C Checking for functions [GetComputerName] in library ['kernel32'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c", line 4: catastrophic error: cannot open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_GetComputerName() { GetComputerName(NULL,NULL);; } int main() { _check_GetComputerName();; return 0; } Compile failed inside link Popping language C Checking for functions [GetUserName] in library ['Advapi32.lib'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c", line 4: catastrophic error: cannot open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_GetUserName() { GetUserName(NULL,NULL);; } int main() { _check_GetUserName();; return 0; } Compile failed inside link Popping language C Checking for functions [GetUserName] in library ['advapi32'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c", line 4: catastrophic error: cannot open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_GetUserName() { GetUserName(NULL,NULL);; } int main() { _check_GetUserName();; return 0; } Compile failed inside link Popping language C Checking for functions [GetDC] in library ['User32.lib'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c", line 4: catastrophic error: cannot open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_GetDC() { GetDC(0);; } int main() { _check_GetDC();; return 0; } Compile failed inside link Popping language C Checking for functions [GetDC] in library ['user32'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c", line 4: catastrophic error: cannot open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_GetDC() { GetDC(0);; } int main() { _check_GetDC();; return 0; } Compile failed inside link Popping language C Checking for functions [CreateCompatibleDC] in library ['Gdi32.lib'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c", line 4: catastrophic error: cannot open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_CreateCompatibleDC() { CreateCompatibleDC(0);; } int main() { _check_CreateCompatibleDC();; return 0; } Compile failed inside link Popping language C Checking for functions [CreateCompatibleDC] in library ['gdi32'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c", line 4: catastrophic error: cannot open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_CreateCompatibleDC() { CreateCompatibleDC(0);; } int main() { _check_CreateCompatibleDC();; return 0; } Compile failed inside link Popping language C Checking for type: int32_t Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c", line 13: warning: variable "a" was declared but never referenced int32_t a;; ^ Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { int32_t a;; return 0; } int32_t found Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c", line 6: warning: variable "u" was declared but never referenced uid_t u; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { uid_t u; ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c", line 8: warning: variable "a" was declared but never referenced int a=R_OK; ^ Source: #include "confdefs.h" #include "conffix.h" #if defined(PETSC_HAVE_UNISTD_H) #include #endif int main() { int a=R_OK; ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int a=0; if (S_ISDIR(a)){} ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c", line 3: catastrophic error: cannot open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { LARGE_INTEGER a; DWORD b=a.u.HighPart; ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c", line 3: catastrophic error: cannot open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { int flags = O_BINARY;; return 0; } Defined "PATH_SEPARATOR" to "':'" Defined "REPLACE_DIR_SEPARATOR" to "'\\'" Defined "DIR_SEPARATOR" to "'/'" Defined "DIR" to ""/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3"" ================================================================================ TEST configureCygwinBrokenPipe from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:868) TESTING: configureCygwinBrokenPipe from PETSc.Configure(config/PETSc/Configure.py:868) Cygwin version <= 1.7.18 had issues with pipes and long commands invoked from gnu-make http://cygwin.com/ml/cygwin/2013-05/msg00340.html Executing: uname -s stdout: Linux ================================================================================ TEST configureDefaultArch from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:884) TESTING: configureDefaultArch from PETSc.Configure(config/PETSc/Configure.py:884) ================================================================================ TEST configureScript from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:901) TESTING: configureScript from PETSc.Configure(config/PETSc/Configure.py:901) Output a script in the conf directory which will reproduce the configuration ================================================================================ TEST configureInstall from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:938) TESTING: configureInstall from PETSc.Configure(config/PETSc/Configure.py:938) Setup the directories for installation Defined make rule "shared_install" with dependencies "" and code ['- at echo "Now to install the libraries do:"', '- at echo "make PETSC_DIR=${PETSC_DIR} PETSC_ARCH=${PETSC_ARCH} install"', '- at echo "========================================="'] ================================================================================ TEST configureGCOV from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:950) TESTING: configureGCOV from PETSc.Configure(config/PETSc/Configure.py:950) ================================================================================ TEST configureFortranFlush from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:955) TESTING: configureFortranFlush from PETSc.Configure(config/PETSc/Configure.py:955) Checking for functions [flush_] in library [''] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char flush_(); static void _check_flush_() { flush_(); } int main() { _check_flush_();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Defined "HAVE_FLUSH" to "1" ================================================================================ TEST configureAtoll from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:680) TESTING: configureAtoll from PETSc.Configure(config/PETSc/Configure.py:680) Checks if atoll exists Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #define _POSIX_C_SOURCE 200112L #include int main() { long v = atoll("25"); return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_ATOLL" to "1" Defined make rule "remote" with dependencies "" and code [] Defined make rule "remoteclean" with dependencies "" and code [] Pushing language C Defined make macro "CC_FLAGS" to "-Xg -O0 -Kopenmp " Popping language C Pushing language Cxx Defined make macro "CXX_FLAGS" to "-Xg -O0 -Kopenmp " Popping language Cxx Defined make macro "CPP_FLAGS" to "" Pushing language C Defined make macro "PCC" to "mpifcc" Defined make macro "PCC_FLAGS" to "-Xg -O0 -Kopenmp " Popping language C Defined make macro "CC_SUFFIX" to "o" Pushing language C Defined make macro "PCC_LINKER" to "mpifcc" Defined make macro "PCC_LINKER_FLAGS" to " -Xg -O0 -Kopenmp" Popping language C Defined make macro "CC_LINKER_SUFFIX" to "" Pushing language FC Defined "HAVE_FORTRAN" to "1" Defined make macro "FPP_FLAGS" to "" Defined make macro "FC_FLAGS" to "-X9 -O0 -Kopenmp " Popping language FC Defined make macro "FC_SUFFIX" to "o" Pushing language FC Executing: mpifrt -V Defined make macro "FC_LINKER" to "mpifrt" Defined make macro "FC_LINKER_FLAGS" to " -X9 -O0 -Kopenmp" Popping language FC Defined make macro "FC_MODULE_FLAG" to "-I" Defined make macro "FC_MODULE_OUTPUT_FLAG" to "-M" Pushing language C Defined make macro "SL_LINKER" to "mpifcc" Defined make macro "SL_LINKER_FLAGS" to "${PCC_LINKER_FLAGS}" Popping language C Defined make macro "SL_LINKER_SUFFIX" to "" Defined "SLSUFFIX" to """" Defined make macro "SL_LINKER_LIBS" to "${PETSC_EXTERNAL_LIB_BASIC}" Defined make macro "PETSC_LANGUAGE" to "CONLY" Defined make macro "PETSC_SCALAR" to "real" Defined make macro "PETSC_PRECISION" to "double" Executing: CC -VV Defined "USE_SOCKET_VIEWER" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { setsockopt(0,SOL_SOCKET,SO_REUSEADDR,0,0); return 0; } Defined "HAVE_SO_REUSEADDR" to "1" Defined "HAVE_HYPRE" to "1" Defined make macro "HYPRE_LIB" to "-Wl,-rpath,/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -L/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -lHYPRE -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++" Defined make macro "HYPRE_INCLUDE" to "-I/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include" Defined make macro "SCALAPACK_LIB" to "-SCALAPACK" Defined make macro "SCALAPACK_INCLUDE" to "" Defined "HAVE_BLASLAPACK" to "1" Defined make macro "BLASLAPACK_LIB" to "-SSL2" Defined make macro "BLASLAPACK_INCLUDE" to "" Defined "HAVE_PTHREAD" to "1" Defined make macro "PTHREAD_LIB" to "" Defined make macro "PTHREAD_INCLUDE" to "" Defined "HAVE_OPENMP" to "1" Defined make macro "OPENMP_LIB" to "" Defined make macro "OPENMP_INCLUDE" to "" Defined "HAVE_SSL" to "1" Defined make macro "SSL_LIB" to "-lssl -lcrypto" Defined make macro "SSL_INCLUDE" to "" Defined "HAVE_MPI" to "1" Defined make macro "MPI_LIB" to "" Defined make macro "MPI_INCLUDE" to "-I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu" Defined make macro "PETSC_WITH_EXTERNAL_LIB" to "-L/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-3.6.3_debug/lib -lpetsc -Wl,-rpath,/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -L/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -lHYPRE -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -SCALAPACK -SSL2 -lssl -lcrypto -ltrtmetcpp -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl " Defined make macro "PETSC_EXTERNAL_LIB_BASIC" to "-Wl,-rpath,/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -L/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -lHYPRE -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -SCALAPACK -SSL2 -lssl -lcrypto -ltrtmetcpp -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl " Defined make macro "PETSC_CC_INCLUDES" to "-I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/include -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-3.6.3_debug/include -I/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu" Pushing language FC Popping language FC Pushing language FC Popping language FC Pushing language FC Popping language FC Pushing language FC Popping language FC Defined make macro "PETSC_FC_INCLUDES" to "-I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/include -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-3.6.3_debug/include -I/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu" Defined make macro "DESTDIR" to "/home/hp150306/t00196/lib/petsc-3.6.3_debug" Defined "LIB_DIR" to ""/home/hp150306/t00196/lib/petsc-3.6.3_debug/lib"" Defined make macro "LIBNAME" to "${INSTALL_LIB_DIR}/libpetsc.${AR_LIB_SUFFIX}" Defined make macro "SHLIBS" to "libpetsc" Defined make macro "PETSC_LIB_BASIC" to "-lpetsc" Defined make macro "PETSC_KSP_LIB_BASIC" to "-lpetsc" Defined make macro "PETSC_TS_LIB_BASIC" to "-lpetsc" Defined make macro "PETSC_TAO_LIB_BASIC" to "-lpetsc" Defined "USE_SINGLE_LIBRARY" to "1" Defined make macro "PETSC_SYS_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_VEC_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_MAT_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_DM_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_KSP_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_SNES_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_TS_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_TAO_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_CHARACTERISTIC_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_CONTRIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "CONFIGURE_OPTIONS" to "--with-cc=mpifcc --with-cxx=mpiFCC --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS=\"-Xg -O0\" --CXX=mpiFCC --CXXFLAGS=\"-Xg -O0\" --FC=mpifrt --FFLAGS=\"-X9 -O0\" --LD_SHARED= --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 --with-scalapack-lib=-SCALAPACK --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 --with-hypre=1 --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4" Pushing language C Popping language C Pushing language FC Popping language FC Pushing language C Popping language C Pushing language FC Popping language FC Skipping cmakeboot due to old python version: (2, 6, 2, 'final', 0) Pushing language C Popping language C Pushing language FC Popping language FC ================================================================================ **** petsc-3.6.3_debug/lib/petsc/conf/petscvariables **** FC_DEFINE_FLAG = -D FAST_AR_FLAGS = Scq AR_FLAGS = cr FC_MODULE_OUTPUT_FLAG = -M PETSC_LANGUAGE = CONLY FC_LINKER_FLAGS = -X9 -O0 -Kopenmp LIBNAME = ${INSTALL_LIB_DIR}/libpetsc.${AR_LIB_SUFFIX} SL_LINKER = mpifcc CC_FLAGS = -Xg -O0 -Kopenmp PETSC_LIB = ${PETSC_WITH_EXTERNAL_LIB} PETSC_PRECISION = double OPENMP_LIB = FC_FLAGS = -X9 -O0 -Kopenmp BLASLAPACK_LIB = -SSL2 PETSC_MAT_LIB = ${PETSC_WITH_EXTERNAL_LIB} PCC = mpifcc SL_LINKER_LIBS = ${PETSC_EXTERNAL_LIB_BASIC} MPI_LIB = SSL_LIB = -lssl -lcrypto PETSC_EXTERNAL_LIB_BASIC = -Wl,-rpath,/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -L/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -lHYPRE -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -SCALAPACK -SSL2 -lssl -lcrypto -ltrtmetcpp -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl SL_LINKER_FLAGS = ${PCC_LINKER_FLAGS} CC_SUFFIX = o OPENMP_INCLUDE = SCALAPACK_INCLUDE = SHLIBS = libpetsc CONFIGURE_OPTIONS = --with-cc=mpifcc --with-cxx=mpiFCC --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS=\"-Xg -O0\" --CXX=mpiFCC --CXXFLAGS=\"-Xg -O0\" --FC=mpifrt --FFLAGS=\"-X9 -O0\" --LD_SHARED= --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 --with-scalapack-lib=-SCALAPACK --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 --with-hypre=1 --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4 PETSC_CHARACTERISTIC_LIB = ${PETSC_WITH_EXTERNAL_LIB} PTHREAD_LIB = PETSC_SCALAR = real PETSC_FC_INCLUDES = -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/include -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-3.6.3_debug/include -I/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu CPP_FLAGS = PETSC_KSP_LIB_BASIC = -lpetsc FPP_FLAGS = HYPRE_INCLUDE = -I/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include FC_LINKER = mpifrt HYPRE_LIB = -Wl,-rpath,/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -L/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -lHYPRE -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ PETSC_KSP_LIB = ${PETSC_WITH_EXTERNAL_LIB} CXX_FLAGS = -Xg -O0 -Kopenmp PETSC_LIB_BASIC = -lpetsc PCC_LINKER_FLAGS = -Xg -O0 -Kopenmp SSL_INCLUDE = PETSC_CONTRIB = ${PETSC_WITH_EXTERNAL_LIB} PETSC_CC_INCLUDES = -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/include -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-3.6.3_debug/include -I/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu PCC_LINKER = mpifcc PETSC_SYS_LIB = ${PETSC_WITH_EXTERNAL_LIB} PCC_FLAGS = -Xg -O0 -Kopenmp PTHREAD_INCLUDE = PETSC_TS_LIB = ${PETSC_WITH_EXTERNAL_LIB} PETSC_TAO_LIB_BASIC = -lpetsc BLASLAPACK_INCLUDE = PETSC_TS_LIB_BASIC = -lpetsc PETSC_VEC_LIB = ${PETSC_WITH_EXTERNAL_LIB} CC_LINKER_SUFFIX = SL_LINKER_SUFFIX = PETSC_DM_LIB = ${PETSC_WITH_EXTERNAL_LIB} DESTDIR = /home/hp150306/t00196/lib/petsc-3.6.3_debug FC_MODULE_FLAG = -I SCALAPACK_LIB = -SCALAPACK PETSC_WITH_EXTERNAL_LIB = -L/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-3.6.3_debug/lib -lpetsc -Wl,-rpath,/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -L/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -lHYPRE -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -SCALAPACK -SSL2 -lssl -lcrypto -ltrtmetcpp -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl PETSC_TAO_LIB = ${PETSC_WITH_EXTERNAL_LIB} MPI_INCLUDE = -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu FC_SUFFIX = o PETSC_SNES_LIB = ${PETSC_WITH_EXTERNAL_LIB} SHELL = /bin/sh GREP = /bin/grep MV = /bin/mv PYTHON = /usr/bin/python MKDIR = /bin/mkdir -p SEDINPLACE = /bin/sed -i SED = /bin/sed DIFF = /usr/bin/diff -w GZIP = /bin/gzip RM = /bin/rm -f CP = /bin/cp CC_LINKER_SLFLAG = -Wl,-rpath, CC = mpifcc RANLIB = /usr/bin/ranlib DYNAMICLINKER = mpifcc CXX = mpiFCC FC = mpifrt CXXCPP = mpiFCC -E FC_LINKER_SLFLAG = -Wl,-rpath, CPP = mpifcc -E AR_LIB_SUFFIX = a LD_SHARED = /usr/bin/ar AR = /usr/bin/ar DIR = /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 PETSC_INDEX_SIZE = 32 OMAKE = /usr/bin/gmake --no-print-directory MAKE_IS_GNUMAKE = 1 MAKE = /usr/bin/gmake MAKE_NP = 7 OMAKE_PRINTDIR = /usr/bin/gmake --print-directory MPIEXEC = mpiexec PETSC_SCALAR_SIZE = 64 BUILDSHAREDLIB = no DSYMUTIL = true TEST_RUNS = C Fortran SSL OPENMP Cxx F90 F90_NoComplex F2003 Fortran_NoComplex C_NoComplex **** petsc-3.6.3_debug/lib/petsc/conf/petscrules **** shared_install: - at echo "Now to install the libraries do:" - at echo "make PETSC_DIR=${PETSC_DIR} PETSC_ARCH=${PETSC_ARCH} install" - at echo "=========================================" remoteclean: remote: libc: ${LIBNAME}(${OBJSC}) libcxx: ${LIBNAME}(${OBJSCXX}) libcu: ${LIBNAME}(${OBJSCU}) libf: ${OBJSF} -${AR} ${AR_FLAGS} ${LIBNAME} ${OBJSF} .F.a: ${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FC_FLAGS} ${FFLAGS} ${FCPPFLAGS} $< -${AR} ${AR_FLAGS} ${LIBNAME} $*.o -${RM} $*.o .f.o .f90.o .f95.o: ${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FC_FLAGS} ${FFLAGS} -o $@ $< .f.a: ${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FC_FLAGS} ${FFLAGS} $< -${AR} ${AR_FLAGS} ${LIBNAME} $*.o -${RM} $*.o .F.o .F90.o .F95.o: ${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FC_FLAGS} ${FFLAGS} ${FCPPFLAGS} -o $@ $< shared_arch: petsc4py-build: petsc4py-install: mpi4py-build: mpi4py-install: **** petsc-3.6.3_debug/include/petscconf.h **** #if !defined(INCLUDED_UNKNOWN) #define INCLUDED_UNKNOWN #ifndef IS_COLORING_MAX #define IS_COLORING_MAX 65535 #endif #ifndef STDC_HEADERS #define STDC_HEADERS 1 #endif #ifndef MPIU_COLORING_VALUE #define MPIU_COLORING_VALUE MPI_UNSIGNED_SHORT #endif #ifndef PETSC_UINTPTR_T #define PETSC_UINTPTR_T uintptr_t #endif #ifndef PETSC_HAVE_PTHREAD #define PETSC_HAVE_PTHREAD 1 #endif #ifndef PETSC_HAVE_OPENMP #define PETSC_HAVE_OPENMP 1 #endif #ifndef PETSC_DEPRECATED #define PETSC_DEPRECATED(why) __attribute((deprecated)) #endif #ifndef PETSC_REPLACE_DIR_SEPARATOR #define PETSC_REPLACE_DIR_SEPARATOR '\\' #endif #ifndef PETSC_HAVE_SO_REUSEADDR #define PETSC_HAVE_SO_REUSEADDR 1 #endif #ifndef PETSC_HAVE_MPI #define PETSC_HAVE_MPI 1 #endif #ifndef PETSC_PREFETCH_HINT_T2 #define PETSC_PREFETCH_HINT_T2 1 #endif #ifndef PETSC_PREFETCH_HINT_T0 #define PETSC_PREFETCH_HINT_T0 3 #endif #ifndef PETSC_PREFETCH_HINT_T1 #define PETSC_PREFETCH_HINT_T1 2 #endif #ifndef PETSC_USE_SOCKET_VIEWER #define PETSC_USE_SOCKET_VIEWER 1 #endif #ifndef PETSC_DIR #define PETSC_DIR "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3" #endif #ifndef PETSC_HAVE_SSL #define PETSC_HAVE_SSL 1 #endif #ifndef PETSC_HAVE_HYPRE #define PETSC_HAVE_HYPRE 1 #endif #ifndef PETSC_LIB_DIR #define PETSC_LIB_DIR "/home/hp150306/t00196/lib/petsc-3.6.3_debug/lib" #endif #ifndef PETSC_HAVE_FORTRAN #define PETSC_HAVE_FORTRAN 1 #endif #ifndef PETSC_USE_ISATTY #define PETSC_USE_ISATTY 1 #endif #ifndef PETSC_SLSUFFIX #define PETSC_SLSUFFIX "" #endif #ifndef PETSC_FUNCTION_NAME_CXX #define PETSC_FUNCTION_NAME_CXX __func__ #endif #ifndef PETSC_HAVE_FLUSH #define PETSC_HAVE_FLUSH 1 #endif #ifndef PETSC_HAVE_ATOLL #define PETSC_HAVE_ATOLL 1 #endif #ifndef PETSC_HAVE_DOUBLE_ALIGN_MALLOC #define PETSC_HAVE_DOUBLE_ALIGN_MALLOC 1 #endif #ifndef PETSC_UNUSED #define PETSC_UNUSED __attribute((unused)) #endif #ifndef PETSC_FUNCTION_NAME_C #define PETSC_FUNCTION_NAME_C __func__ #endif #ifndef PETSC_USE_SINGLE_LIBRARY #define PETSC_USE_SINGLE_LIBRARY 1 #endif #ifndef PETSC_HAVE_BUILTIN_EXPECT #define PETSC_HAVE_BUILTIN_EXPECT 1 #endif #ifndef PETSC_DIR_SEPARATOR #define PETSC_DIR_SEPARATOR '/' #endif #ifndef PETSC_PATH_SEPARATOR #define PETSC_PATH_SEPARATOR ':' #endif #ifndef PETSC_PREFETCH_HINT_NTA #define PETSC_PREFETCH_HINT_NTA 0 #endif #ifndef PETSC_Prefetch #define PETSC_Prefetch(a,b,c) __builtin_prefetch((a),(b),(c)) #endif #ifndef PETSC_HAVE_BLASLAPACK #define PETSC_HAVE_BLASLAPACK 1 #endif #ifndef PETSC_HAVE_GZIP #define PETSC_HAVE_GZIP 1 #endif #ifndef PETSC_HAVE_STRING_H #define PETSC_HAVE_STRING_H 1 #endif #ifndef PETSC_HAVE_SYS_TYPES_H #define PETSC_HAVE_SYS_TYPES_H 1 #endif #ifndef PETSC_HAVE_ENDIAN_H #define PETSC_HAVE_ENDIAN_H 1 #endif #ifndef PETSC_HAVE_SYS_PROCFS_H #define PETSC_HAVE_SYS_PROCFS_H 1 #endif #ifndef PETSC_HAVE_DLFCN_H #define PETSC_HAVE_DLFCN_H 1 #endif #ifndef PETSC_HAVE_SCHED_H #define PETSC_HAVE_SCHED_H 1 #endif #ifndef PETSC_HAVE_STDINT_H #define PETSC_HAVE_STDINT_H 1 #endif #ifndef PETSC_HAVE_LINUX_KERNEL_H #define PETSC_HAVE_LINUX_KERNEL_H 1 #endif #ifndef PETSC_HAVE_TIME_H #define PETSC_HAVE_TIME_H 1 #endif #ifndef PETSC_HAVE_MATH_H #define PETSC_HAVE_MATH_H 1 #endif #ifndef PETSC_TIME_WITH_SYS_TIME #define PETSC_TIME_WITH_SYS_TIME 1 #endif #ifndef PETSC_HAVE_SYS_PARAM_H #define PETSC_HAVE_SYS_PARAM_H 1 #endif #ifndef PETSC_HAVE_PTHREAD_H #define PETSC_HAVE_PTHREAD_H 1 #endif #ifndef PETSC_HAVE_UNISTD_H #define PETSC_HAVE_UNISTD_H 1 #endif #ifndef PETSC_HAVE_STDLIB_H #define PETSC_HAVE_STDLIB_H 1 #endif #ifndef PETSC_HAVE_SYS_WAIT_H #define PETSC_HAVE_SYS_WAIT_H 1 #endif #ifndef PETSC_HAVE_SETJMP_H #define PETSC_HAVE_SETJMP_H 1 #endif #ifndef PETSC_HAVE_LIMITS_H #define PETSC_HAVE_LIMITS_H 1 #endif #ifndef PETSC_HAVE_SYS_UTSNAME_H #define PETSC_HAVE_SYS_UTSNAME_H 1 #endif #ifndef PETSC_HAVE_NETINET_IN_H #define PETSC_HAVE_NETINET_IN_H 1 #endif #ifndef PETSC_HAVE_SYS_SOCKET_H #define PETSC_HAVE_SYS_SOCKET_H 1 #endif #ifndef PETSC_HAVE_FLOAT_H #define PETSC_HAVE_FLOAT_H 1 #endif #ifndef PETSC_HAVE_SEARCH_H #define PETSC_HAVE_SEARCH_H 1 #endif #ifndef PETSC_HAVE_SYS_RESOURCE_H #define PETSC_HAVE_SYS_RESOURCE_H 1 #endif #ifndef PETSC_HAVE_SYS_TIMES_H #define PETSC_HAVE_SYS_TIMES_H 1 #endif #ifndef PETSC_HAVE_NETDB_H #define PETSC_HAVE_NETDB_H 1 #endif #ifndef PETSC_HAVE_MALLOC_H #define PETSC_HAVE_MALLOC_H 1 #endif #ifndef PETSC_HAVE_PWD_H #define PETSC_HAVE_PWD_H 1 #endif #ifndef PETSC_HAVE_FCNTL_H #define PETSC_HAVE_FCNTL_H 1 #endif #ifndef PETSC_HAVE_STRINGS_H #define PETSC_HAVE_STRINGS_H 1 #endif #ifndef PETSC_HAVE_SYS_SYSINFO_H #define PETSC_HAVE_SYS_SYSINFO_H 1 #endif #ifndef PETSC_HAVE_SYS_TIME_H #define PETSC_HAVE_SYS_TIME_H 1 #endif #ifndef PETSC_USING_F90 #define PETSC_USING_F90 1 #endif #ifndef PETSC_USING_F2003 #define PETSC_USING_F2003 1 #endif #ifndef PETSC_HAVE_RTLD_NOW #define PETSC_HAVE_RTLD_NOW 1 #endif #ifndef PETSC_HAVE_RTLD_LOCAL #define PETSC_HAVE_RTLD_LOCAL 1 #endif #ifndef PETSC_HAVE_RTLD_LAZY #define PETSC_HAVE_RTLD_LAZY 1 #endif #ifndef PETSC_C_STATIC_INLINE #define PETSC_C_STATIC_INLINE static inline #endif #ifndef PETSC_HAVE_FORTRAN_UNDERSCORE #define PETSC_HAVE_FORTRAN_UNDERSCORE 1 #endif #ifndef PETSC_HAVE_CXX_NAMESPACE #define PETSC_HAVE_CXX_NAMESPACE 1 #endif #ifndef PETSC_HAVE_RTLD_GLOBAL #define PETSC_HAVE_RTLD_GLOBAL 1 #endif #ifndef PETSC_C_RESTRICT #define PETSC_C_RESTRICT __restrict__ #endif #ifndef PETSC_CXX_RESTRICT #define PETSC_CXX_RESTRICT __restrict__ #endif #ifndef PETSC_CXX_STATIC_INLINE #define PETSC_CXX_STATIC_INLINE static inline #endif #ifndef PETSC_HAVE_F90_2PTR_ARG #define PETSC_HAVE_F90_2PTR_ARG 1 #endif #ifndef PETSC_HAVE_LIBZ #define PETSC_HAVE_LIBZ 1 #endif #ifndef PETSC_HAVE_LIBDL #define PETSC_HAVE_LIBDL 1 #endif #ifndef PETSC_HAVE_LIBSTDC__ #define PETSC_HAVE_LIBSTDC__ 1 #endif #ifndef PETSC_HAVE_LIBPTHREAD #define PETSC_HAVE_LIBPTHREAD 1 #endif #ifndef PETSC_HAVE_LIBCRYPTO #define PETSC_HAVE_LIBCRYPTO 1 #endif #ifndef PETSC_HAVE_FENV_H #define PETSC_HAVE_FENV_H 1 #endif #ifndef PETSC_HAVE_LIBHYPRE #define PETSC_HAVE_LIBHYPRE 1 #endif #ifndef PETSC_HAVE_LOG2 #define PETSC_HAVE_LOG2 1 #endif #ifndef PETSC_HAVE_LIBSTD_MT #define PETSC_HAVE_LIBSTD_MT 1 #endif #ifndef PETSC_HAVE_LIBMPI_CXX #define PETSC_HAVE_LIBMPI_CXX 1 #endif #ifndef PETSC_HAVE_ERF #define PETSC_HAVE_ERF 1 #endif #ifndef PETSC_HAVE_LIBSSL #define PETSC_HAVE_LIBSSL 1 #endif #ifndef PETSC_HAVE_LIBTRTMETCPP #define PETSC_HAVE_LIBTRTMETCPP 1 #endif #ifndef PETSC_HAVE_TGAMMA #define PETSC_HAVE_TGAMMA 1 #endif #ifndef PETSC_HAVE_LIBFJDEMGL #define PETSC_HAVE_LIBFJDEMGL 1 #endif #ifndef PETSC_ARCH #define PETSC_ARCH "petsc-3.6.3_debug" #endif #ifndef PETSC_CLANGUAGE_C #define PETSC_CLANGUAGE_C 1 #endif #ifndef PETSC_USE_ERRORCHECKING #define PETSC_USE_ERRORCHECKING 1 #endif #ifndef PETSC_WORDS_BIGENDIAN #define PETSC_WORDS_BIGENDIAN 1 #endif #ifndef PETSC_BITS_PER_BYTE #define PETSC_BITS_PER_BYTE 8 #endif #ifndef PETSC_SIZEOF_MPI_FINT #define PETSC_SIZEOF_MPI_FINT 4 #endif #ifndef PETSC_SIZEOF_VOID_P #define PETSC_SIZEOF_VOID_P 8 #endif #ifndef PETSC_RETSIGTYPE #define PETSC_RETSIGTYPE void #endif #ifndef PETSC_HAVE_CXX_COMPLEX #define PETSC_HAVE_CXX_COMPLEX 1 #endif #ifndef PETSC_SIZEOF_LONG #define PETSC_SIZEOF_LONG 8 #endif #ifndef PETSC_USE_FORTRANKIND #define PETSC_USE_FORTRANKIND 1 #endif #ifndef PETSC_SIZEOF_SIZE_T #define PETSC_SIZEOF_SIZE_T 8 #endif #ifndef PETSC_HAVE_SIGINFO_T #define PETSC_HAVE_SIGINFO_T 1 #endif #ifndef PETSC_SIZEOF_CHAR #define PETSC_SIZEOF_CHAR 1 #endif #ifndef PETSC_SIZEOF_DOUBLE #define PETSC_SIZEOF_DOUBLE 8 #endif #ifndef PETSC_SIZEOF_FLOAT #define PETSC_SIZEOF_FLOAT 4 #endif #ifndef PETSC_HAVE_C99_COMPLEX #define PETSC_HAVE_C99_COMPLEX 1 #endif #ifndef PETSC_SIZEOF_INT #define PETSC_SIZEOF_INT 4 #endif #ifndef PETSC_SIZEOF_LONG_LONG #define PETSC_SIZEOF_LONG_LONG 8 #endif #ifndef PETSC_SIZEOF_MPI_COMM #define PETSC_SIZEOF_MPI_COMM 8 #endif #ifndef PETSC_SIZEOF_SHORT #define PETSC_SIZEOF_SHORT 2 #endif #ifndef PETSC_HAVE_STRCASECMP #define PETSC_HAVE_STRCASECMP 1 #endif #ifndef PETSC_HAVE_GET_NPROCS #define PETSC_HAVE_GET_NPROCS 1 #endif #ifndef PETSC_HAVE_POPEN #define PETSC_HAVE_POPEN 1 #endif #ifndef PETSC_HAVE_SIGSET #define PETSC_HAVE_SIGSET 1 #endif #ifndef PETSC_HAVE_GETWD #define PETSC_HAVE_GETWD 1 #endif #ifndef PETSC_HAVE_VSNPRINTF #define PETSC_HAVE_VSNPRINTF 1 #endif #ifndef PETSC_HAVE_TIMES #define PETSC_HAVE_TIMES 1 #endif #ifndef PETSC_HAVE_DLSYM #define PETSC_HAVE_DLSYM 1 #endif #ifndef PETSC_HAVE_SNPRINTF #define PETSC_HAVE_SNPRINTF 1 #endif #ifndef PETSC_HAVE_GETHOSTBYNAME #define PETSC_HAVE_GETHOSTBYNAME 1 #endif #ifndef PETSC_HAVE_GETCWD #define PETSC_HAVE_GETCWD 1 #endif #ifndef PETSC_HAVE_DLERROR #define PETSC_HAVE_DLERROR 1 #endif #ifndef PETSC_HAVE_FORK #define PETSC_HAVE_FORK 1 #endif #ifndef PETSC_HAVE_RAND #define PETSC_HAVE_RAND 1 #endif #ifndef PETSC_HAVE_GETTIMEOFDAY #define PETSC_HAVE_GETTIMEOFDAY 1 #endif #ifndef PETSC_HAVE_DLCLOSE #define PETSC_HAVE_DLCLOSE 1 #endif #ifndef PETSC_HAVE_UNAME #define PETSC_HAVE_UNAME 1 #endif #ifndef PETSC_HAVE_GETHOSTNAME #define PETSC_HAVE_GETHOSTNAME 1 #endif #ifndef PETSC_HAVE_MKSTEMP #define PETSC_HAVE_MKSTEMP 1 #endif #ifndef PETSC_HAVE_SIGACTION #define PETSC_HAVE_SIGACTION 1 #endif #ifndef PETSC_HAVE_DRAND48 #define PETSC_HAVE_DRAND48 1 #endif #ifndef PETSC_HAVE_MEMALIGN #define PETSC_HAVE_MEMALIGN 1 #endif #ifndef PETSC_HAVE_VA_COPY #define PETSC_HAVE_VA_COPY 1 #endif #ifndef PETSC_HAVE_CLOCK #define PETSC_HAVE_CLOCK 1 #endif #ifndef PETSC_HAVE_ACCESS #define PETSC_HAVE_ACCESS 1 #endif #ifndef PETSC_HAVE_SIGNAL #define PETSC_HAVE_SIGNAL 1 #endif #ifndef PETSC_HAVE_USLEEP #define PETSC_HAVE_USLEEP 1 #endif #ifndef PETSC_HAVE_GETRUSAGE #define PETSC_HAVE_GETRUSAGE 1 #endif #ifndef PETSC_HAVE_VFPRINTF #define PETSC_HAVE_VFPRINTF 1 #endif #ifndef PETSC_HAVE_NANOSLEEP #define PETSC_HAVE_NANOSLEEP 1 #endif #ifndef PETSC_HAVE_GETDOMAINNAME #define PETSC_HAVE_GETDOMAINNAME 1 #endif #ifndef PETSC_HAVE_TIME #define PETSC_HAVE_TIME 1 #endif #ifndef PETSC_HAVE_LSEEK #define PETSC_HAVE_LSEEK 1 #endif #ifndef PETSC_HAVE_SOCKET #define PETSC_HAVE_SOCKET 1 #endif #ifndef PETSC_HAVE_SYSINFO #define PETSC_HAVE_SYSINFO 1 #endif #ifndef PETSC_HAVE_READLINK #define PETSC_HAVE_READLINK 1 #endif #ifndef PETSC_HAVE_REALPATH #define PETSC_HAVE_REALPATH 1 #endif #ifndef PETSC_HAVE_DLOPEN #define PETSC_HAVE_DLOPEN 1 #endif #ifndef PETSC_HAVE_MEMMOVE #define PETSC_HAVE_MEMMOVE 1 #endif #ifndef PETSC_SIGNAL_CAST #define PETSC_SIGNAL_CAST #endif #ifndef PETSC_HAVE_SLEEP #define PETSC_HAVE_SLEEP 1 #endif #ifndef PETSC_HAVE_VPRINTF #define PETSC_HAVE_VPRINTF 1 #endif #ifndef PETSC_HAVE_BZERO #define PETSC_HAVE_BZERO 1 #endif #ifndef PETSC_HAVE_GETPAGESIZE #define PETSC_HAVE_GETPAGESIZE 1 #endif #ifndef PETSC_CPU_RELAX #define PETSC_CPU_RELAX() __asm__ __volatile__ ("":::"memory") #endif #ifndef PETSC_BLASLAPACK_UNDERSCORE #define PETSC_BLASLAPACK_UNDERSCORE 1 #endif #ifndef PETSC_HAVE_MPI_F90MODULE #define PETSC_HAVE_MPI_F90MODULE 1 #endif #ifndef PETSC_HAVE_MPI_IALLREDUCE #define PETSC_HAVE_MPI_IALLREDUCE 1 #endif #ifndef PETSC_HAVE_OMPI_MINOR_VERSION #define PETSC_HAVE_OMPI_MINOR_VERSION 6 #endif #ifndef PETSC_HAVE_MPI_IN_PLACE #define PETSC_HAVE_MPI_IN_PLACE 1 #endif #ifndef PETSC_HAVE_MPI_COMM_C2F #define PETSC_HAVE_MPI_COMM_C2F 1 #endif #ifndef PETSC_HAVE_MPI_COMBINER_CONTIGUOUS #define PETSC_HAVE_MPI_COMBINER_CONTIGUOUS 1 #endif #ifndef PETSC_HAVE_MPI_TYPE_GET_EXTENT #define PETSC_HAVE_MPI_TYPE_GET_EXTENT 1 #endif #ifndef PETSC_HAVE_MPI_WIN_CREATE #define PETSC_HAVE_MPI_WIN_CREATE 1 #endif #ifndef PETSC_HAVE_MPI_TYPE_DUP #define PETSC_HAVE_MPI_TYPE_DUP 1 #endif #ifndef PETSC_HAVE_MPI_INIT_THREAD #define PETSC_HAVE_MPI_INIT_THREAD 1 #endif #ifndef PETSC_HAVE_MPI_COMM_F2C #define PETSC_HAVE_MPI_COMM_F2C 1 #endif #ifndef PETSC_HAVE_MPI_TYPE_GET_ENVELOPE #define PETSC_HAVE_MPI_TYPE_GET_ENVELOPE 1 #endif #ifndef PETSC_HAVE_MPI_ALLTOALLW #define PETSC_HAVE_MPI_ALLTOALLW 1 #endif #ifndef PETSC_HAVE_OMPI_MAJOR_VERSION #define PETSC_HAVE_OMPI_MAJOR_VERSION 1 #endif #ifndef PETSC_HAVE_MPIIO #define PETSC_HAVE_MPIIO 1 #endif #ifndef PETSC_HAVE_MPI_COMM_SPAWN #define PETSC_HAVE_MPI_COMM_SPAWN 1 #endif #ifndef PETSC_HAVE_MPI_FINT #define PETSC_HAVE_MPI_FINT 1 #endif #ifndef PETSC_HAVE_MPI_IBARRIER #define PETSC_HAVE_MPI_IBARRIER 1 #endif #ifndef PETSC_HAVE_MPI_FINALIZED #define PETSC_HAVE_MPI_FINALIZED 1 #endif #ifndef PETSC_HAVE_OMPI_RELEASE_VERSION #define PETSC_HAVE_OMPI_RELEASE_VERSION 3 #endif #ifndef PETSC_HAVE_MPI_REPLACE #define PETSC_HAVE_MPI_REPLACE 1 #endif #ifndef PETSC_HAVE_MPI_EXSCAN #define PETSC_HAVE_MPI_EXSCAN 1 #endif #ifndef PETSC_HAVE_MPI_COMBINER_DUP #define PETSC_HAVE_MPI_COMBINER_DUP 1 #endif #ifndef PETSC_USE_INFO #define PETSC_USE_INFO 1 #endif #ifndef PETSC_Alignx #define PETSC_Alignx(a,b) #endif #ifndef PETSC_USE_BACKWARD_LOOP #define PETSC_USE_BACKWARD_LOOP 1 #endif #ifndef PETSC_USE_DEBUG #define PETSC_USE_DEBUG 1 #endif #ifndef PETSC_IS_COLOR_VALUE_TYPE_SIZE #define PETSC_IS_COLOR_VALUE_TYPE_SIZE PETSC_SIZEOF_SHORT #endif #ifndef PETSC_USE_LOG #define PETSC_USE_LOG 1 #endif #ifndef PETSC_IS_COLOR_VALUE_TYPE #define PETSC_IS_COLOR_VALUE_TYPE short #endif #ifndef PETSC_USE_CTABLE #define PETSC_USE_CTABLE 1 #endif #ifndef PETSC_MEMALIGN #define PETSC_MEMALIGN 16 #endif #ifndef PETSC_USE_FORTRAN_INTERFACES #define PETSC_USE_FORTRAN_INTERFACES 1 #endif #ifndef PETSC_USE_SCALAR_REAL #define PETSC_USE_SCALAR_REAL 1 #endif #ifndef PETSC_HAVE_ISINF #define PETSC_HAVE_ISINF 1 #endif #ifndef PETSC_HAVE_ISNAN #define PETSC_HAVE_ISNAN 1 #endif #ifndef PETSC_USE_REAL_DOUBLE #define PETSC_USE_REAL_DOUBLE 1 #endif #ifndef PETSC_HAVE_DYNAMIC_LIBRARIES #define PETSC_HAVE_DYNAMIC_LIBRARIES 1 #endif #ifndef PETSC_HAVE_SHARED_LIBRARIES #define PETSC_HAVE_SHARED_LIBRARIES 1 #endif #ifndef PETSC__GNU_SOURCE #define PETSC__GNU_SOURCE 1 #endif #ifndef PETSC__BSD_SOURCE #define PETSC__BSD_SOURCE 1 #endif #ifndef PETSC__DEFAULT_SOURCE #define PETSC__DEFAULT_SOURCE 1 #endif #ifndef PETSC_LEVEL1_DCACHE_LINESIZE #define PETSC_LEVEL1_DCACHE_LINESIZE 32 #endif #ifndef PETSC_LEVEL1_DCACHE_SIZE #define PETSC_LEVEL1_DCACHE_SIZE 32768 #endif #ifndef PETSC_HAVE_FORTRAN_GET_COMMAND_ARGUMENT #define PETSC_HAVE_FORTRAN_GET_COMMAND_ARGUMENT 1 #endif #ifndef PETSC_USE_PROC_FOR_SIZE #define PETSC_USE_PROC_FOR_SIZE 1 #endif #ifndef PETSC_HAVE_SCHED_CPU_SET_T #define PETSC_HAVE_SCHED_CPU_SET_T 1 #endif #ifndef PETSC_HAVE_PTHREAD_BARRIER_T #define PETSC_HAVE_PTHREAD_BARRIER_T 1 #endif #ifndef PETSC_HAVE_SYS_SYSCTL_H #define PETSC_HAVE_SYS_SYSCTL_H 1 #endif #endif **** petsc-3.6.3_debug/include/petscfix.h **** #if !defined(INCLUDED_UNKNOWN) #define INCLUDED_UNKNOWN #if defined(__cplusplus) extern "C" { } #else #endif #endif Configure Actions These are the actions performed by configure on the filesystem ----------------------------------------------------------------- PETSc: Build : Set default architecture to petsc-3.6.3_debug in lib/petsc/conf/petscvariables File creation : Created petsc-3.6.3_debug/lib/petsc/conf/reconfigure-petsc-3.6.3_debug.py for automatic reconfiguration Framework: File creation : Created makefile configure header petsc-3.6.3_debug/lib/petsc/conf/petscvariables File creation : Created makefile configure header petsc-3.6.3_debug/lib/petsc/conf/petscrules File creation : Created configure header petsc-3.6.3_debug/include/petscconf.h File creation : Created C specific configure header petsc-3.6.3_debug/include/petscfix.h Pushing language C Popping language C Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Compilers: C Compiler: mpifcc -Xg -O0 -Kopenmp C++ Compiler: mpiFCC -Xg -O0 -Kopenmp Fortran Compiler: mpifrt -X9 -O0 -Kopenmp Linkers: Static linker: /usr/bin/ar cr Dynamic linker: mpifcc -shared -Xg -O0 -Kopenmp make: BLAS/LAPACK: -SSL2 MPI: Includes: -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu pthread: hypre: Includes: -I/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include Library: -Wl,-rpath,/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -L/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -lHYPRE -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ openmp: scalapack: Library: -SCALAPACK Arch: ssl: Library: -lssl -lcrypto PETSc: PETSC_ARCH: petsc-3.6.3_debug PETSC_DIR: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 Clanguage: C Integer size: 32 Memory alignment: 16 Scalar type: real Precision: double shared libraries: disabled xxx=========================================================================xxx Configure stage complete. Now build PETSc libraries with (gnumake build): make PETSC_DIR=/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 PETSC_ARCH=petsc-3.6.3_debug all xxx=========================================================================xxx ================================================================================ Finishing Configure Run at Thu May 26 15:55:43 2016 ================================================================================ From neok.m4700 at gmail.com Thu Jun 2 09:12:41 2016 From: neok.m4700 at gmail.com (neok m4700) Date: Thu, 2 Jun 2016 16:12:41 +0200 Subject: [petsc-users] (no subject) Message-ID: Hi, I built petsc 3.7.1 and petsc4py 3.7.0 (with openmpi 1.10.2) and ran the examples in the demo directory. $ python test_mat_ksp.py => runs as expected (serial) $ mpiexec -np 2 python test_mat_ksp.py => fails with the following output: Traceback (most recent call last): File "<...>/demo/kspsolve/test_mat_ksp.py", line 15, in execfile('petsc-ksp.py') File "<...>/demo/kspsolve/test_mat_ksp.py", line 6, in execfile try: exec(fh.read()+"\n", globals, locals) File "", line 15, in File "PETSc/KSP.pyx", line 384, in petsc4py.PETSc.KSP.solve (src/petsc4py.PETSc.c:153555) petsc4py.PETSc.Error: error code 92 [0] KSPSolve() line 599 in <...>/src/ksp/ksp/interface/itfunc.c [0] KSPSetUp() line 390 in <...>/src/ksp/ksp/interface/itfunc.c [0] PCSetUp() line 968 in <...>/src/ksp/pc/interface/precon.c [0] PCSetUp_ICC() line 21 in <...>/src/ksp/pc/impls/factor/icc/icc.c [0] MatGetFactor() line 4240 in<...>/src/mat/interface/matrix.c [0] You cannot overwrite this option since that will conflict with other previously set options [0] Could not locate solver package (null). Perhaps you must ./configure with --download-(null) <...> ------------------------------------------------------- Primary job terminated normally, but 1 process returned a non-zero exit code.. Per user-direction, the job has been aborted. ------------------------------------------------------- -------------------------------------------------------------------------- mpirun detected that one or more processes exited with non-zero status, thus causing the job to be terminated. The first process to do so was: Process name: [[23110,1],0] Exit code: 1 -------------------------------------------------------------------------- What have I done wrong ? -------------- next part -------------- An HTML attachment was scrubbed... URL: From knepley at gmail.com Thu Jun 2 09:39:55 2016 From: knepley at gmail.com (Matthew Knepley) Date: Thu, 2 Jun 2016 09:39:55 -0500 Subject: [petsc-users] (no subject) In-Reply-To: References: Message-ID: On Thu, Jun 2, 2016 at 9:12 AM, neok m4700 wrote: > Hi, > > I built petsc 3.7.1 and petsc4py 3.7.0 (with openmpi 1.10.2) and ran the > examples in the demo directory. > I believe this was fixed in 'master': https://bitbucket.org/petsc/petsc/commits/00c67f3b09c0bcda06af5ed306d845d9138e5003 Is it possible to try this? Thanks, Matt > $ python test_mat_ksp.py > => runs as expected (serial) > > $ mpiexec -np 2 python test_mat_ksp.py > => fails with the following output: > > Traceback (most recent call last): > File "<...>/demo/kspsolve/test_mat_ksp.py", line 15, in > execfile('petsc-ksp.py') > File "<...>/demo/kspsolve/test_mat_ksp.py", line 6, in execfile > try: exec(fh.read()+"\n", globals, locals) > File "", line 15, in > File "PETSc/KSP.pyx", line 384, in petsc4py.PETSc.KSP.solve > (src/petsc4py.PETSc.c:153555) > petsc4py.PETSc.Error: error code 92 > [0] KSPSolve() line 599 in <...>/src/ksp/ksp/interface/itfunc.c > [0] KSPSetUp() line 390 in <...>/src/ksp/ksp/interface/itfunc.c > [0] PCSetUp() line 968 in <...>/src/ksp/pc/interface/precon.c > [0] PCSetUp_ICC() line 21 in <...>/src/ksp/pc/impls/factor/icc/icc.c > [0] MatGetFactor() line 4240 in<...>/src/mat/interface/matrix.c > [0] You cannot overwrite this option since that will conflict with other > previously set options > [0] Could not locate solver package (null). Perhaps you must ./configure > with --download-(null) > > <...> > ------------------------------------------------------- > Primary job terminated normally, but 1 process returned > a non-zero exit code.. Per user-direction, the job has been aborted. > ------------------------------------------------------- > -------------------------------------------------------------------------- > mpirun detected that one or more processes exited with non-zero status, > thus causing > the job to be terminated. The first process to do so was: > > Process name: [[23110,1],0] > Exit code: 1 > -------------------------------------------------------------------------- > > > What have I done wrong ? > > > > -- What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead. -- Norbert Wiener -------------- next part -------------- An HTML attachment was scrubbed... URL: From neok.m4700 at gmail.com Thu Jun 2 10:54:14 2016 From: neok.m4700 at gmail.com (neok m4700) Date: Thu, 2 Jun 2016 17:54:14 +0200 Subject: [petsc-users] (no subject) In-Reply-To: References: Message-ID: Hi Matthew, I've rebuilt petsc // petsc4py with following versions: 3.7.0 // 3.7.0 => same runtime error 00c67f3 // 3.7.1 => fails to build petsc4py (error below) 00c67f3 // 6e8e093 => same as above f1b0812 (latest commit) // 6e8e093 (latest commit) => same as above In file included from src/PETSc.c:3:0: src/petsc4py.PETSc.c: In function ?__pyx_pf_8petsc4py_5PETSc_6DMPlex_4createBoxMesh?: src/petsc4py.PETSc.c:214629:112: error: incompatible type for argument 4 of ?DMPlexCreateBoxMesh? __pyx_t_4 = __pyx_f_8petsc4py_5PETSc_CHKERR(DMPlexCreateBoxMesh(__pyx_v_ccomm, __pyx_v_cdim, __pyx_v_interp, (&__pyx_v_newdm))); if (unlikely(__pyx_t_4 == -1)) __PYX_ERR(42, 49, __pyx_L1_error) using - numpy 1.11.0 - openblas 0.2.18 - openmpi 1.10.2 Thanks 2016-06-02 16:39 GMT+02:00 Matthew Knepley : > On Thu, Jun 2, 2016 at 9:12 AM, neok m4700 wrote: > >> Hi, >> >> I built petsc 3.7.1 and petsc4py 3.7.0 (with openmpi 1.10.2) and ran the >> examples in the demo directory. >> > > I believe this was fixed in 'master': > https://bitbucket.org/petsc/petsc/commits/00c67f3b09c0bcda06af5ed306d845d9138e5003 > > Is it possible to try this? > > Thanks, > > Matt > > >> $ python test_mat_ksp.py >> => runs as expected (serial) >> >> $ mpiexec -np 2 python test_mat_ksp.py >> => fails with the following output: >> >> Traceback (most recent call last): >> File "<...>/demo/kspsolve/test_mat_ksp.py", line 15, in >> execfile('petsc-ksp.py') >> File "<...>/demo/kspsolve/test_mat_ksp.py", line 6, in execfile >> try: exec(fh.read()+"\n", globals, locals) >> File "", line 15, in >> File "PETSc/KSP.pyx", line 384, in petsc4py.PETSc.KSP.solve >> (src/petsc4py.PETSc.c:153555) >> petsc4py.PETSc.Error: error code 92 >> [0] KSPSolve() line 599 in <...>/src/ksp/ksp/interface/itfunc.c >> [0] KSPSetUp() line 390 in <...>/src/ksp/ksp/interface/itfunc.c >> [0] PCSetUp() line 968 in <...>/src/ksp/pc/interface/precon.c >> [0] PCSetUp_ICC() line 21 in <...>/src/ksp/pc/impls/factor/icc/icc.c >> [0] MatGetFactor() line 4240 in<...>/src/mat/interface/matrix.c >> [0] You cannot overwrite this option since that will conflict with other >> previously set options >> [0] Could not locate solver package (null). Perhaps you must ./configure >> with --download-(null) >> >> <...> >> ------------------------------------------------------- >> Primary job terminated normally, but 1 process returned >> a non-zero exit code.. Per user-direction, the job has been aborted. >> ------------------------------------------------------- >> -------------------------------------------------------------------------- >> mpirun detected that one or more processes exited with non-zero status, >> thus causing >> the job to be terminated. The first process to do so was: >> >> Process name: [[23110,1],0] >> Exit code: 1 >> -------------------------------------------------------------------------- >> >> >> What have I done wrong ? >> >> >> >> > > > -- > What most experimenters take for granted before they begin their > experiments is infinitely more interesting than any results to which their > experiments lead. > -- Norbert Wiener > -------------- next part -------------- An HTML attachment was scrubbed... URL: From balay at mcs.anl.gov Thu Jun 2 10:58:47 2016 From: balay at mcs.anl.gov (Satish Balay) Date: Thu, 2 Jun 2016 10:58:47 -0500 Subject: [petsc-users] (no subject) In-Reply-To: References: Message-ID: with petsc-master - you would have to use petsc4py-master. i.e try petsc-eab7b92 with petsc4py-6e8e093 Satish On Thu, 2 Jun 2016, neok m4700 wrote: > Hi Matthew, > > I've rebuilt petsc // petsc4py with following versions: > > 3.7.0 // 3.7.0 => same runtime error > 00c67f3 // 3.7.1 => fails to build petsc4py (error below) > 00c67f3 // 6e8e093 => same as above > f1b0812 (latest commit) // 6e8e093 (latest commit) => same as above > > In file included from src/PETSc.c:3:0: > src/petsc4py.PETSc.c: In function > ?__pyx_pf_8petsc4py_5PETSc_6DMPlex_4createBoxMesh?: > src/petsc4py.PETSc.c:214629:112: error: incompatible type for argument 4 of > ?DMPlexCreateBoxMesh? > __pyx_t_4 = > __pyx_f_8petsc4py_5PETSc_CHKERR(DMPlexCreateBoxMesh(__pyx_v_ccomm, > __pyx_v_cdim, __pyx_v_interp, (&__pyx_v_newdm))); if (unlikely(__pyx_t_4 == > -1)) __PYX_ERR(42, 49, __pyx_L1_error) > > using > - numpy 1.11.0 > - openblas 0.2.18 > - openmpi 1.10.2 > > Thanks > > 2016-06-02 16:39 GMT+02:00 Matthew Knepley : > > > On Thu, Jun 2, 2016 at 9:12 AM, neok m4700 wrote: > > > >> Hi, > >> > >> I built petsc 3.7.1 and petsc4py 3.7.0 (with openmpi 1.10.2) and ran the > >> examples in the demo directory. > >> > > > > I believe this was fixed in 'master': > > https://bitbucket.org/petsc/petsc/commits/00c67f3b09c0bcda06af5ed306d845d9138e5003 > > > > Is it possible to try this? > > > > Thanks, > > > > Matt > > > > > >> $ python test_mat_ksp.py > >> => runs as expected (serial) > >> > >> $ mpiexec -np 2 python test_mat_ksp.py > >> => fails with the following output: > >> > >> Traceback (most recent call last): > >> File "<...>/demo/kspsolve/test_mat_ksp.py", line 15, in > >> execfile('petsc-ksp.py') > >> File "<...>/demo/kspsolve/test_mat_ksp.py", line 6, in execfile > >> try: exec(fh.read()+"\n", globals, locals) > >> File "", line 15, in > >> File "PETSc/KSP.pyx", line 384, in petsc4py.PETSc.KSP.solve > >> (src/petsc4py.PETSc.c:153555) > >> petsc4py.PETSc.Error: error code 92 > >> [0] KSPSolve() line 599 in <...>/src/ksp/ksp/interface/itfunc.c > >> [0] KSPSetUp() line 390 in <...>/src/ksp/ksp/interface/itfunc.c > >> [0] PCSetUp() line 968 in <...>/src/ksp/pc/interface/precon.c > >> [0] PCSetUp_ICC() line 21 in <...>/src/ksp/pc/impls/factor/icc/icc.c > >> [0] MatGetFactor() line 4240 in<...>/src/mat/interface/matrix.c > >> [0] You cannot overwrite this option since that will conflict with other > >> previously set options > >> [0] Could not locate solver package (null). Perhaps you must ./configure > >> with --download-(null) > >> > >> <...> > >> ------------------------------------------------------- > >> Primary job terminated normally, but 1 process returned > >> a non-zero exit code.. Per user-direction, the job has been aborted. > >> ------------------------------------------------------- > >> -------------------------------------------------------------------------- > >> mpirun detected that one or more processes exited with non-zero status, > >> thus causing > >> the job to be terminated. The first process to do so was: > >> > >> Process name: [[23110,1],0] > >> Exit code: 1 > >> -------------------------------------------------------------------------- > >> > >> > >> What have I done wrong ? > >> > >> > >> > >> > > > > > > -- > > What most experimenters take for granted before they begin their > > experiments is infinitely more interesting than any results to which their > > experiments lead. > > -- Norbert Wiener > > > From neok.m4700 at gmail.com Thu Jun 2 11:10:29 2016 From: neok.m4700 at gmail.com (neok m4700) Date: Thu, 2 Jun 2016 18:10:29 +0200 Subject: [petsc-users] (no subject) In-Reply-To: References: Message-ID: Hi Satish, Thanks for the correction. The error message is now slightly different, but the result is the same (serial runs fine, parallel with mpirun fails with following error): [0] KSPSolve() line 599 in <...>/src/ksp/ksp/interface/itfunc.c [0] KSPSetUp() line 390 in <...>/src/ksp/ksp/interface/itfunc.c [0] PCSetUp() line 968 in <...>/src/ksp/pc/interface/precon.c [0] PCSetUp_ICC() line 21 in<...>/src/ksp/pc/impls/factor/icc/icc.c [0] MatGetFactor() line 4291 in <...>/src/mat/interface/matrix.c [0] See http://www.mcs.anl.gov/petsc/documentation/linearsolvertable.html for possible LU and Cholesky solvers [0] Could not locate a solver package. Perhaps you must ./configure with --download- 2016-06-02 17:58 GMT+02:00 Satish Balay : > with petsc-master - you would have to use petsc4py-master. > > i.e try petsc-eab7b92 with petsc4py-6e8e093 > > Satish > > > On Thu, 2 Jun 2016, neok m4700 wrote: > > > Hi Matthew, > > > > I've rebuilt petsc // petsc4py with following versions: > > > > 3.7.0 // 3.7.0 => same runtime error > > 00c67f3 // 3.7.1 => fails to build petsc4py (error below) > > 00c67f3 // 6e8e093 => same as above > > f1b0812 (latest commit) // 6e8e093 (latest commit) => same as above > > > > In file included from src/PETSc.c:3:0: > > src/petsc4py.PETSc.c: In function > > ?__pyx_pf_8petsc4py_5PETSc_6DMPlex_4createBoxMesh?: > > src/petsc4py.PETSc.c:214629:112: error: incompatible type for argument 4 > of > > ?DMPlexCreateBoxMesh? > > __pyx_t_4 = > > __pyx_f_8petsc4py_5PETSc_CHKERR(DMPlexCreateBoxMesh(__pyx_v_ccomm, > > __pyx_v_cdim, __pyx_v_interp, (&__pyx_v_newdm))); if (unlikely(__pyx_t_4 > == > > -1)) __PYX_ERR(42, 49, __pyx_L1_error) > > > > using > > - numpy 1.11.0 > > - openblas 0.2.18 > > - openmpi 1.10.2 > > > > Thanks > > > > 2016-06-02 16:39 GMT+02:00 Matthew Knepley : > > > > > On Thu, Jun 2, 2016 at 9:12 AM, neok m4700 > wrote: > > > > > >> Hi, > > >> > > >> I built petsc 3.7.1 and petsc4py 3.7.0 (with openmpi 1.10.2) and ran > the > > >> examples in the demo directory. > > >> > > > > > > I believe this was fixed in 'master': > > > > https://bitbucket.org/petsc/petsc/commits/00c67f3b09c0bcda06af5ed306d845d9138e5003 > > > > > > Is it possible to try this? > > > > > > Thanks, > > > > > > Matt > > > > > > > > >> $ python test_mat_ksp.py > > >> => runs as expected (serial) > > >> > > >> $ mpiexec -np 2 python test_mat_ksp.py > > >> => fails with the following output: > > >> > > >> Traceback (most recent call last): > > >> File "<...>/demo/kspsolve/test_mat_ksp.py", line 15, in > > >> execfile('petsc-ksp.py') > > >> File "<...>/demo/kspsolve/test_mat_ksp.py", line 6, in execfile > > >> try: exec(fh.read()+"\n", globals, locals) > > >> File "", line 15, in > > >> File "PETSc/KSP.pyx", line 384, in petsc4py.PETSc.KSP.solve > > >> (src/petsc4py.PETSc.c:153555) > > >> petsc4py.PETSc.Error: error code 92 > > >> [0] KSPSolve() line 599 in <...>/src/ksp/ksp/interface/itfunc.c > > >> [0] KSPSetUp() line 390 in <...>/src/ksp/ksp/interface/itfunc.c > > >> [0] PCSetUp() line 968 in <...>/src/ksp/pc/interface/precon.c > > >> [0] PCSetUp_ICC() line 21 in <...>/src/ksp/pc/impls/factor/icc/icc.c > > >> [0] MatGetFactor() line 4240 in<...>/src/mat/interface/matrix.c > > >> [0] You cannot overwrite this option since that will conflict with > other > > >> previously set options > > >> [0] Could not locate solver package (null). Perhaps you must > ./configure > > >> with --download-(null) > > >> > > >> <...> > > >> ------------------------------------------------------- > > >> Primary job terminated normally, but 1 process returned > > >> a non-zero exit code.. Per user-direction, the job has been aborted. > > >> ------------------------------------------------------- > > >> > -------------------------------------------------------------------------- > > >> mpirun detected that one or more processes exited with non-zero > status, > > >> thus causing > > >> the job to be terminated. The first process to do so was: > > >> > > >> Process name: [[23110,1],0] > > >> Exit code: 1 > > >> > -------------------------------------------------------------------------- > > >> > > >> > > >> What have I done wrong ? > > >> > > >> > > >> > > >> > > > > > > > > > -- > > > What most experimenters take for granted before they begin their > > > experiments is infinitely more interesting than any results to which > their > > > experiments lead. > > > -- Norbert Wiener > > > > > > -------------- next part -------------- An HTML attachment was scrubbed... URL: From knepley at gmail.com Thu Jun 2 11:15:08 2016 From: knepley at gmail.com (Matthew Knepley) Date: Thu, 2 Jun 2016 11:15:08 -0500 Subject: [petsc-users] (no subject) In-Reply-To: References: Message-ID: On Thu, Jun 2, 2016 at 11:10 AM, neok m4700 wrote: > Hi Satish, > > Thanks for the correction. > > The error message is now slightly different, but the result is the same > (serial runs fine, parallel with mpirun fails with following error): > Now the error is correct. You are asking to run ICC in parallel, which we do not support. It is telling you to look at the table of available solvers. Thanks, Matt > [0] KSPSolve() line 599 in <...>/src/ksp/ksp/interface/itfunc.c > [0] KSPSetUp() line 390 in <...>/src/ksp/ksp/interface/itfunc.c > [0] PCSetUp() line 968 in <...>/src/ksp/pc/interface/precon.c > [0] PCSetUp_ICC() line 21 in<...>/src/ksp/pc/impls/factor/icc/icc.c > [0] MatGetFactor() line 4291 in <...>/src/mat/interface/matrix.c > [0] See http://www.mcs.anl.gov/petsc/documentation/linearsolvertable.html > for possible LU and Cholesky solvers > [0] Could not locate a solver package. Perhaps you must ./configure with > --download- > > > > > 2016-06-02 17:58 GMT+02:00 Satish Balay : > >> with petsc-master - you would have to use petsc4py-master. >> >> i.e try petsc-eab7b92 with petsc4py-6e8e093 >> >> Satish >> >> >> On Thu, 2 Jun 2016, neok m4700 wrote: >> >> > Hi Matthew, >> > >> > I've rebuilt petsc // petsc4py with following versions: >> > >> > 3.7.0 // 3.7.0 => same runtime error >> > 00c67f3 // 3.7.1 => fails to build petsc4py (error below) >> > 00c67f3 // 6e8e093 => same as above >> > f1b0812 (latest commit) // 6e8e093 (latest commit) => same as above >> > >> > In file included from src/PETSc.c:3:0: >> > src/petsc4py.PETSc.c: In function >> > ?__pyx_pf_8petsc4py_5PETSc_6DMPlex_4createBoxMesh?: >> > src/petsc4py.PETSc.c:214629:112: error: incompatible type for argument >> 4 of >> > ?DMPlexCreateBoxMesh? >> > __pyx_t_4 = >> > __pyx_f_8petsc4py_5PETSc_CHKERR(DMPlexCreateBoxMesh(__pyx_v_ccomm, >> > __pyx_v_cdim, __pyx_v_interp, (&__pyx_v_newdm))); if >> (unlikely(__pyx_t_4 == >> > -1)) __PYX_ERR(42, 49, __pyx_L1_error) >> > >> > using >> > - numpy 1.11.0 >> > - openblas 0.2.18 >> > - openmpi 1.10.2 >> > >> > Thanks >> > >> > 2016-06-02 16:39 GMT+02:00 Matthew Knepley : >> > >> > > On Thu, Jun 2, 2016 at 9:12 AM, neok m4700 >> wrote: >> > > >> > >> Hi, >> > >> >> > >> I built petsc 3.7.1 and petsc4py 3.7.0 (with openmpi 1.10.2) and ran >> the >> > >> examples in the demo directory. >> > >> >> > > >> > > I believe this was fixed in 'master': >> > > >> https://bitbucket.org/petsc/petsc/commits/00c67f3b09c0bcda06af5ed306d845d9138e5003 >> > > >> > > Is it possible to try this? >> > > >> > > Thanks, >> > > >> > > Matt >> > > >> > > >> > >> $ python test_mat_ksp.py >> > >> => runs as expected (serial) >> > >> >> > >> $ mpiexec -np 2 python test_mat_ksp.py >> > >> => fails with the following output: >> > >> >> > >> Traceback (most recent call last): >> > >> File "<...>/demo/kspsolve/test_mat_ksp.py", line 15, in >> > >> execfile('petsc-ksp.py') >> > >> File "<...>/demo/kspsolve/test_mat_ksp.py", line 6, in execfile >> > >> try: exec(fh.read()+"\n", globals, locals) >> > >> File "", line 15, in >> > >> File "PETSc/KSP.pyx", line 384, in petsc4py.PETSc.KSP.solve >> > >> (src/petsc4py.PETSc.c:153555) >> > >> petsc4py.PETSc.Error: error code 92 >> > >> [0] KSPSolve() line 599 in <...>/src/ksp/ksp/interface/itfunc.c >> > >> [0] KSPSetUp() line 390 in <...>/src/ksp/ksp/interface/itfunc.c >> > >> [0] PCSetUp() line 968 in <...>/src/ksp/pc/interface/precon.c >> > >> [0] PCSetUp_ICC() line 21 in <...>/src/ksp/pc/impls/factor/icc/icc.c >> > >> [0] MatGetFactor() line 4240 in<...>/src/mat/interface/matrix.c >> > >> [0] You cannot overwrite this option since that will conflict with >> other >> > >> previously set options >> > >> [0] Could not locate solver package (null). Perhaps you must >> ./configure >> > >> with --download-(null) >> > >> >> > >> <...> >> > >> ------------------------------------------------------- >> > >> Primary job terminated normally, but 1 process returned >> > >> a non-zero exit code.. Per user-direction, the job has been aborted. >> > >> ------------------------------------------------------- >> > >> >> -------------------------------------------------------------------------- >> > >> mpirun detected that one or more processes exited with non-zero >> status, >> > >> thus causing >> > >> the job to be terminated. The first process to do so was: >> > >> >> > >> Process name: [[23110,1],0] >> > >> Exit code: 1 >> > >> >> -------------------------------------------------------------------------- >> > >> >> > >> >> > >> What have I done wrong ? >> > >> >> > >> >> > >> >> > >> >> > > >> > > >> > > -- >> > > What most experimenters take for granted before they begin their >> > > experiments is infinitely more interesting than any results to which >> their >> > > experiments lead. >> > > -- Norbert Wiener >> > > >> > >> > > -- What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead. -- Norbert Wiener -------------- next part -------------- An HTML attachment was scrubbed... URL: From neok.m4700 at gmail.com Thu Jun 2 11:19:19 2016 From: neok.m4700 at gmail.com (neok m4700) Date: Thu, 2 Jun 2016 18:19:19 +0200 Subject: [petsc-users] (no subject) In-Reply-To: References: Message-ID: Re, Makes sense to read the documentation, I will try with another preconditioners. Thanks for the support. 2016-06-02 18:15 GMT+02:00 Matthew Knepley : > On Thu, Jun 2, 2016 at 11:10 AM, neok m4700 wrote: > >> Hi Satish, >> >> Thanks for the correction. >> >> The error message is now slightly different, but the result is the same >> (serial runs fine, parallel with mpirun fails with following error): >> > > Now the error is correct. You are asking to run ICC in parallel, which we > do not support. It is telling you > to look at the table of available solvers. > > Thanks, > > Matt > > >> [0] KSPSolve() line 599 in <...>/src/ksp/ksp/interface/itfunc.c >> [0] KSPSetUp() line 390 in <...>/src/ksp/ksp/interface/itfunc.c >> [0] PCSetUp() line 968 in <...>/src/ksp/pc/interface/precon.c >> [0] PCSetUp_ICC() line 21 in<...>/src/ksp/pc/impls/factor/icc/icc.c >> [0] MatGetFactor() line 4291 in <...>/src/mat/interface/matrix.c >> [0] See http://www.mcs.anl.gov/petsc/documentation/linearsolvertable.html >> for possible LU and Cholesky solvers >> [0] Could not locate a solver package. Perhaps you must ./configure with >> --download- >> >> >> >> >> 2016-06-02 17:58 GMT+02:00 Satish Balay : >> >>> with petsc-master - you would have to use petsc4py-master. >>> >>> i.e try petsc-eab7b92 with petsc4py-6e8e093 >>> >>> Satish >>> >>> >>> On Thu, 2 Jun 2016, neok m4700 wrote: >>> >>> > Hi Matthew, >>> > >>> > I've rebuilt petsc // petsc4py with following versions: >>> > >>> > 3.7.0 // 3.7.0 => same runtime error >>> > 00c67f3 // 3.7.1 => fails to build petsc4py (error below) >>> > 00c67f3 // 6e8e093 => same as above >>> > f1b0812 (latest commit) // 6e8e093 (latest commit) => same as above >>> > >>> > In file included from src/PETSc.c:3:0: >>> > src/petsc4py.PETSc.c: In function >>> > ?__pyx_pf_8petsc4py_5PETSc_6DMPlex_4createBoxMesh?: >>> > src/petsc4py.PETSc.c:214629:112: error: incompatible type for argument >>> 4 of >>> > ?DMPlexCreateBoxMesh? >>> > __pyx_t_4 = >>> > __pyx_f_8petsc4py_5PETSc_CHKERR(DMPlexCreateBoxMesh(__pyx_v_ccomm, >>> > __pyx_v_cdim, __pyx_v_interp, (&__pyx_v_newdm))); if >>> (unlikely(__pyx_t_4 == >>> > -1)) __PYX_ERR(42, 49, __pyx_L1_error) >>> > >>> > using >>> > - numpy 1.11.0 >>> > - openblas 0.2.18 >>> > - openmpi 1.10.2 >>> > >>> > Thanks >>> > >>> > 2016-06-02 16:39 GMT+02:00 Matthew Knepley : >>> > >>> > > On Thu, Jun 2, 2016 at 9:12 AM, neok m4700 >>> wrote: >>> > > >>> > >> Hi, >>> > >> >>> > >> I built petsc 3.7.1 and petsc4py 3.7.0 (with openmpi 1.10.2) and >>> ran the >>> > >> examples in the demo directory. >>> > >> >>> > > >>> > > I believe this was fixed in 'master': >>> > > >>> https://bitbucket.org/petsc/petsc/commits/00c67f3b09c0bcda06af5ed306d845d9138e5003 >>> > > >>> > > Is it possible to try this? >>> > > >>> > > Thanks, >>> > > >>> > > Matt >>> > > >>> > > >>> > >> $ python test_mat_ksp.py >>> > >> => runs as expected (serial) >>> > >> >>> > >> $ mpiexec -np 2 python test_mat_ksp.py >>> > >> => fails with the following output: >>> > >> >>> > >> Traceback (most recent call last): >>> > >> File "<...>/demo/kspsolve/test_mat_ksp.py", line 15, in >>> > >> execfile('petsc-ksp.py') >>> > >> File "<...>/demo/kspsolve/test_mat_ksp.py", line 6, in execfile >>> > >> try: exec(fh.read()+"\n", globals, locals) >>> > >> File "", line 15, in >>> > >> File "PETSc/KSP.pyx", line 384, in petsc4py.PETSc.KSP.solve >>> > >> (src/petsc4py.PETSc.c:153555) >>> > >> petsc4py.PETSc.Error: error code 92 >>> > >> [0] KSPSolve() line 599 in <...>/src/ksp/ksp/interface/itfunc.c >>> > >> [0] KSPSetUp() line 390 in <...>/src/ksp/ksp/interface/itfunc.c >>> > >> [0] PCSetUp() line 968 in <...>/src/ksp/pc/interface/precon.c >>> > >> [0] PCSetUp_ICC() line 21 in <...>/src/ksp/pc/impls/factor/icc/icc.c >>> > >> [0] MatGetFactor() line 4240 in<...>/src/mat/interface/matrix.c >>> > >> [0] You cannot overwrite this option since that will conflict with >>> other >>> > >> previously set options >>> > >> [0] Could not locate solver package (null). Perhaps you must >>> ./configure >>> > >> with --download-(null) >>> > >> >>> > >> <...> >>> > >> ------------------------------------------------------- >>> > >> Primary job terminated normally, but 1 process returned >>> > >> a non-zero exit code.. Per user-direction, the job has been aborted. >>> > >> ------------------------------------------------------- >>> > >> >>> -------------------------------------------------------------------------- >>> > >> mpirun detected that one or more processes exited with non-zero >>> status, >>> > >> thus causing >>> > >> the job to be terminated. The first process to do so was: >>> > >> >>> > >> Process name: [[23110,1],0] >>> > >> Exit code: 1 >>> > >> >>> -------------------------------------------------------------------------- >>> > >> >>> > >> >>> > >> What have I done wrong ? >>> > >> >>> > >> >>> > >> >>> > >> >>> > > >>> > > >>> > > -- >>> > > What most experimenters take for granted before they begin their >>> > > experiments is infinitely more interesting than any results to which >>> their >>> > > experiments lead. >>> > > -- Norbert Wiener >>> > > >>> > >>> >> >> > > > -- > What most experimenters take for granted before they begin their > experiments is infinitely more interesting than any results to which their > experiments lead. > -- Norbert Wiener > -------------- next part -------------- An HTML attachment was scrubbed... URL: From lb2653 at columbia.edu Thu Jun 2 17:11:42 2016 From: lb2653 at columbia.edu (Luc Berger-Vergiat) Date: Thu, 2 Jun 2016 18:11:42 -0400 Subject: [petsc-users] Clarification on PCASMSetLocalSubdomain is and is_local Message-ID: <5750AF1E.9060302@columbia.edu> Hi all, I would like a quick clarification on what is and is_local are representing in the PCASMSetLocalSubdomains(). My understanding is that if I have two mpi ranks and four subdomains I can end up having four blocks that I can denote as follows: | domain1 | domain2 | domain3 | domain3 | rank1 | block11 | block12 | block13 | | rank2 | block21 | block22 | -- | block24 | to each blockIJ I associate isIJ. So for rank1 I will have is=[1,2,3] and is_local=[is11,is12,is13], and for rank2 I will have is=[1,2,4] and is_local=[is21,is22,is24]. Or am I not understanding things correctly? -- Best, Luc From knepley at gmail.com Thu Jun 2 17:21:44 2016 From: knepley at gmail.com (Matthew Knepley) Date: Thu, 2 Jun 2016 17:21:44 -0500 Subject: [petsc-users] Clarification on PCASMSetLocalSubdomain is and is_local In-Reply-To: <5750AF1E.9060302@columbia.edu> References: <5750AF1E.9060302@columbia.edu> Message-ID: On Thu, Jun 2, 2016 at 5:11 PM, Luc Berger-Vergiat wrote: > Hi all, > I would like a quick clarification on what is and is_local are > representing in the PCASMSetLocalSubdomains(). > My understanding is that if I have two mpi ranks and four subdomains I can > end up having four blocks that I can denote as follows: > > | domain1 | domain2 | domain3 | domain3 | > rank1 | block11 | block12 | block13 | | > rank2 | block21 | block22 | -- | block24 | > > to each blockIJ I associate isIJ. > > So for rank1 I will have is=[1,2,3] and is_local=[is11,is12,is13], and for > rank2 I will have is=[1,2,4] and is_local=[is21,is22,is24]. > Or am I not understanding things correctly? I did not understand the above. The best way to think of this is algebraically. Suppose you have a matrix A, and you divide the rows into k disjoint sets where each process gets one set. Then is_local on each process is a list of the rows in that set. Now we also allow some overlap, which means rows in other sets are also used. The is on each process contains both is_local and these extra rows from other sets. Thanks, Matt > > -- > Best, > Luc > > > -- What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead. -- Norbert Wiener -------------- next part -------------- An HTML attachment was scrubbed... URL: From lb2653 at columbia.edu Thu Jun 2 17:27:14 2016 From: lb2653 at columbia.edu (Luc Berger-Vergiat) Date: Thu, 2 Jun 2016 18:27:14 -0400 Subject: [petsc-users] Clarification on PCASMSetLocalSubdomain is and is_local In-Reply-To: References: <5750AF1E.9060302@columbia.edu> Message-ID: <5750B2C2.40109@columbia.edu> Ok I get it, then if I have multiple subdomains on the local processor is and is_local will be arrays of is that represent each subdomain on that processor? Best, Luc On 06/02/2016 06:21 PM, Matthew Knepley wrote: > On Thu, Jun 2, 2016 at 5:11 PM, Luc Berger-Vergiat > > wrote: > > Hi all, > I would like a quick clarification on what is and is_local are > representing in the PCASMSetLocalSubdomains(). > My understanding is that if I have two mpi ranks and four > subdomains I can end up having four blocks that I can denote as > follows: > > | domain1 | domain2 | domain3 | domain3 | > rank1 | block11 | block12 | block13 | | > rank2 | block21 | block22 | -- | block24 | > > to each blockIJ I associate isIJ. > > So for rank1 I will have is=[1,2,3] and is_local=[is11,is12,is13], > and for rank2 I will have is=[1,2,4] and is_local=[is21,is22,is24]. > Or am I not understanding things correctly? > > > I did not understand the above. > > The best way to think of this is algebraically. Suppose you have a > matrix A, and you divide the rows into k disjoint sets where each > process gets one set. Then is_local on each process is a list of the > rows in that set. Now we also allow some overlap, which means > rows in other sets are also used. The is on each process contains both > is_local and these extra rows from other sets. > > Thanks, > > Matt > > > -- > Best, > Luc > > > > > > -- > What most experimenters take for granted before they begin their > experiments is infinitely more interesting than any results to which > their experiments lead. > -- Norbert Wiener -- Best, Luc -------------- next part -------------- An HTML attachment was scrubbed... URL: From knepley at gmail.com Thu Jun 2 17:34:11 2016 From: knepley at gmail.com (Matthew Knepley) Date: Thu, 2 Jun 2016 17:34:11 -0500 Subject: [petsc-users] Clarification on PCASMSetLocalSubdomain is and is_local In-Reply-To: <5750B2C2.40109@columbia.edu> References: <5750AF1E.9060302@columbia.edu> <5750B2C2.40109@columbia.edu> Message-ID: On Thu, Jun 2, 2016 at 5:27 PM, Luc Berger-Vergiat wrote: > Ok I get it, then if I have multiple subdomains on the local processor is > and is_local will be arrays of is that represent each subdomain on that > processor? > Yep. Matt > Best, > Luc > > On 06/02/2016 06:21 PM, Matthew Knepley wrote: > > On Thu, Jun 2, 2016 at 5:11 PM, Luc Berger-Vergiat < > lb2653 at columbia.edu> wrote: > >> Hi all, >> I would like a quick clarification on what is and is_local are >> representing in the PCASMSetLocalSubdomains(). >> My understanding is that if I have two mpi ranks and four subdomains I >> can end up having four blocks that I can denote as follows: >> >> | domain1 | domain2 | domain3 | domain3 | >> rank1 | block11 | block12 | block13 | | >> rank2 | block21 | block22 | -- | block24 | >> >> to each blockIJ I associate isIJ. >> >> So for rank1 I will have is=[1,2,3] and is_local=[is11,is12,is13], and >> for rank2 I will have is=[1,2,4] and is_local=[is21,is22,is24]. >> Or am I not understanding things correctly? > > > I did not understand the above. > > The best way to think of this is algebraically. Suppose you have a matrix > A, and you divide the rows into k disjoint sets where each > process gets one set. Then is_local on each process is a list of the rows > in that set. Now we also allow some overlap, which means > rows in other sets are also used. The is on each process contains both > is_local and these extra rows from other sets. > > Thanks, > > Matt > > >> >> -- >> Best, >> Luc >> >> >> > > > -- > What most experimenters take for granted before they begin their > experiments is infinitely more interesting than any results to which their > experiments lead. > -- Norbert Wiener > > > -- > Best, > Luc > > -- What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead. -- Norbert Wiener -------------- next part -------------- An HTML attachment was scrubbed... URL: From zonexo at gmail.com Fri Jun 3 03:22:53 2016 From: zonexo at gmail.com (TAY wee-beng) Date: Fri, 3 Jun 2016 16:22:53 +0800 Subject: [petsc-users] Fwd: Re: Error with PETSc on K computer In-Reply-To: <7423eeed-4b95-28e7-c55d-08e515911935@gmail.com> References: <7423eeed-4b95-28e7-c55d-08e515911935@gmail.com> Message-ID: <3436e085-071a-db3f-3438-84e2536af2d5@gmail.com> Hi, Is there any update to the issue below? No hurry, just to make sure that the email is sent successfully. Thanks -------- Forwarded Message -------- Subject: Re: [petsc-users] Error with PETSc on K computer Date: Thu, 2 Jun 2016 10:25:22 +0800 From: TAY wee-beng To: petsc-users Hi Satish, The X9 option is : Provides a different interpretation under Fortran 95 specifications for any parts not conforming to the language specifications of this compiler I just patched and re-compiled but it still can't work. I've attached the configure.log for both builds. FYI, some parts of the PETSc 3.6.3 code were initially patch to make it work with the K computer system: $ diff -u petsc-3.6.3/config/BuildSystem/config/package.py.org petsc-3.6.3/config/BuildSystem/config/package.py --- petsc-3.6.3/config/BuildSystem/config/package.py.org 2015-12-04 14:06:42.000000000 +0900 +++ petsc-3.6.3/config/BuildSystem/config/package.py 2016-01-22 11:09:37.000000000 +0900 @@ -174,7 +174,7 @@ return '' def getSharedFlag(self,cflags): - for flag in ['-PIC', '-fPIC', '-KPIC', '-qpic']: + for flag in ['-KPIC', '-fPIC', '-PIC', '-qpic']: if cflags.find(flag) >=0: return flag return '' $ diff -u petsc-3.6.3/config/BuildSystem/config/setCompilers.py.org petsc-3.6.3/config/BuildSystem/config/setCompilers.py --- petsc-3.6.3/config/BuildSystem/config/setCompilers.py.org 2015-07-23 00:22:46.000000000 +0900 +++ petsc-3.6.3/config/BuildSystem/config/setCompilers.py 2016-01-22 11:10:05.000000000 +0900 @@ -1017,7 +1017,7 @@ self.pushLanguage(language) #different compilers are sensitive to the order of testing these flags. So separete out GCC test. if config.setCompilers.Configure.isGNU(self.getCompiler()): testFlags = ['-fPIC'] - else: testFlags = ['-PIC', '-fPIC', '-KPIC','-qpic'] + else: testFlags = ['-KPIC', '-fPIC', '-PIC','-qpic'] for testFlag in testFlags: try: self.logPrint('Trying '+language+' compiler flag '+testFlag) $ diff -u petsc-3.6.3/config/BuildSystem/config/packages/openmp.py.org petsc-3.6.3/config/BuildSystem/config/packages/openmp.py --- petsc-3.6.3/config/BuildSystem/config/packages/openmp.py.org 2016-01-25 15:42:23.000000000+0900 +++ petsc-3.6.3/config/BuildSystem/config/packages/openmp.py 2016-01-22 17:13:52.000000000 +0900 @@ -19,7 +19,8 @@ self.found = 0 self.setCompilers.pushLanguage('C') # - for flag in ["-fopenmp", # Gnu + for flag in ["-Kopenmp", # Fujitsu + "-fopenmp", # Gnu "-qsmp=omp",# IBM XL C/C++ "-h omp", # Cray. Must come after XL because XL interprets this option as meaning"-soname omp" "-mp", # Portland Group $ diff -u ./petsc-3.6.3/config/BuildSystem/config/compilers.py.org ./petsc-3.6.3/config/BuildSystem/config/compilers.py --- ./petsc-3.6.3/config/BuildSystem/config/compilers.py.org 2015-06-10 06:24:49.000000000 +0900 +++ ./petsc-3.6.3/config/BuildSystem/config/compilers.py 2016-02-19 11:56:12.000000000 +0900 @@ -164,7 +164,7 @@ def checkCLibraries(self): '''Determines the libraries needed to link with C''' oldFlags = self.setCompilers.LDFLAGS - self.setCompilers.LDFLAGS += ' -v' + self.setCompilers.LDFLAGS += ' -###' self.pushLanguage('C') (output, returnCode) = self.outputLink('', '') self.setCompilers.LDFLAGS = oldFlags @@ -413,7 +413,7 @@ def checkCxxLibraries(self): '''Determines the libraries needed to link with C++''' oldFlags = self.setCompilers.LDFLAGS - self.setCompilers.LDFLAGS += ' -v' + self.setCompilers.LDFLAGS += ' -###' self.pushLanguage('Cxx') (output, returnCode) = self.outputLink('', '') self.setCompilers.LDFLAGS = oldFlags Thank you Yours sincerely, TAY wee-beng On 2/6/2016 3:18 AM, Satish Balay wrote: > What does -X9 in --FFLAGS="-X9 -O0" do? > > can you send configure.log for this build? > > And does the attached patch make a difference with this example? > [suggest doing a separate temporary build of PETSc - in a different source location - to check this.] > > Satish > > On Wed, 1 Jun 2016, TAY wee-beng wrote: > >> Hi Satish, >> >> Only partially working: >> >> [t00196 at b04-036 tutorials]$ mpiexec -n 2 ./ex4f90 >> jwe1050i-w The hardware barrier couldn't be used and continues processing >> using the software barrier. >> taken to (standard) corrective action, execution continuing. >> jwe1050i-w The hardware barrier couldn't be used and continues processing >> using the software barrier. >> taken to (standard) corrective action, execution continuing. >> Vec Object:Vec Object:initial vector:initial vector: 1 MPI processes >> type: seq >> 10 >> 20 >> 30 >> 40 >> 50 >> 60 >> 1 MPI processes >> type: seq >> 10 >> 20 >> 30 >> 40 >> 50 >> 60 >> [1]PETSC ERROR: >> ------------------------------------------------------------------------ >> [1]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, probably >> memory access out of range >> [1]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger >> [1]PETSC ERROR: or see >> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind >> [1]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple Mac OS X to >> find memory corruption errors >> [1]PETSC ERROR: likely location of problem given in stack below >> [1]PETSC ERROR: --------------------- Stack Frames >> ------------------------------------ >> [1]PETSC ERROR: Note: The EXACT line numbers in the stack are not available, >> [1]PETSC ERROR: INSTEAD the line number of the start of the function >> [1]PETSC ERROR: is given. >> [1]PETSC ERROR: [1] F90Array1dCreate line 50 >> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c >> [1]PETSC ERROR: --------------------- Error Message >> ------------------------------------------[0]PETSC ERROR: >> ------------------------------------------------------------------------ >> [0]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, probably >> memory access out of range >> [0]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger >> [0]PETSC ERROR: or see >> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind >> [0]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple Mac OS X to >> find memory corruption errors >> [0]PETSC ERROR: likely location of problem given in stack below >> [0]PETSC ERROR: --------------------- Stack Frames >> ------------------------------------ >> [0]PETSC ERROR: Note: The EXACT line numbers in the stack are not available, >> [0]PETSC ERROR: INSTEAD the line number of the start of the function >> [0]PETSC ERROR: is given. >> [0]PETSC ERROR: [0] F90Array1dCreate line 50 >> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c >> [0]PETSC ERROR: --------------------- Error Message >> -------------------------------------------------------------- >> [1]PETSC ERROR: Signal received >> [1]PETSC ERROR: Seehttp://www.mcs.anl.gov/petsc/documentation/faq.html for >> trouble shooting. >> [1]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015 >> [1]PETSC ERROR: ./ex4f90 on a petsc-3.6.3_debug named b04-036 by Unknown Wed >> Jun 1 13:23:41 2016 >> [1]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC >> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" >> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" --LD_SHARED= >> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >> --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 >> --with-scalapack-lib=-SCALAPACK >> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >> --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 --with-hypre=1 >> --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4 >> [1]PETSC ERROR: #1 User provided function() line 0 in unknown file >> -------------------------------------------------------------------------- >> [mpi::mpi-api::mpi-abort] >> MPI_ABORT was invoked on rank 1 in communicator MPI_COMM_WORLD >> with errorcode 59. >> >> NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes. >> You may or may not see output from other processes, depending on >> exactly when Open MPI kills them. >> -------------------------------------------------------------------------- >> [b04-036:28998] >> /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_errmgr_base_error_abort+0x84) >> [0xffffffff11360404] >> [b04-036:28998] >> /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(ompi_mpi_abort+0x51c) >> [0xffffffff1110391c] >> [b04-036:28998] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(MPI_Abort+0x6c) >> [0xffffffff1111b5ec] >> [b04-036:28998] >> /opt/FJSVtclang/GM-1.2.0-20/lib64/libtrtmet_c.so.1(MPI_Abort+0x2c) >> [0xffffffff00281bf0] >> [b04-036:28998] ./ex4f90 [0x292548] >> [b04-036:28998] ./ex4f90 [0x29165c] >> [b04-036:28998] /opt/FJSVxosmmm/lib64/libmpgpthread.so.1(_IO_funlockfile+0x5c) >> [0xffffffff121e1974] >> [b04-036:28998] ./ex4f90 [0x9f6748] >> [b04-036:28998] ./ex4f90 [0x9f0ea4] >> [b04-036:28998] ./ex4f90 [0x2c76a0] >> [b04-036:28998] ./ex4f90(MAIN__+0x38c) [0x10688c] >> [b04-036:28998] ./ex4f90(main+0xec) [0x268e91c] >> [b04-036:28998] /lib64/libc.so.6(__libc_start_main+0x194) [0xffffffff138cb81c] >> [b04-036:28998] ./ex4f90 [0x1063ac] >> [1]PETSC ERROR: >> ------------------------------------------------------------------------ >> [1]PETSC ERROR: Caught signal number 15 Terminate: Some process (or the batch >> system) has told this process to end >> [1]PETSC ERROR: Tr-------------------- >> [0]PETSC ERROR: Signal received >> [0]PETSC ERROR: Seehttp://www.mcs.anl.gov/petsc/documentation/faq.html for >> trouble shooting. >> [0]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015 >> [0]PETSC ERROR: ./ex4f90 on a petsc-3.6.3_debug named b04-036 by Unknown Wed >> Jun 1 13:23:41 2016 >> [0]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC >> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" >> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" --LD_SHARED= >> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >> --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 >> --with-scalapack-lib=-SCALAPACK >> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >> --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 --with-hypre=1 >> --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4 >> [0]PETSC ERROR: #1 User provided function() line 0 in unknown file >> -------------------------------------------------------------------------- >> [mpi::mpi-api::mpi-abort] >> MPI_ABORT was invoked on rank 0 in communicator MPI_COMM_WORLD >> with errorcode 59. >> >> NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes. >> You may or may not see output from other processes, depending on >> exactly when Open MPI kills them. >> -------------------------------------------------------------------------- >> [b04-036:28997] >> /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_errmgr_base_error_abort+0x84) >> [0xffffffff11360404] >> [b04-036:28997] >> /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(ompi_mpi_abort+0x51c) >> [0xffffffff1110391c] >> [b04-036:28997] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(MPI_Abort+0x6c) >> [0xffffffff1111b5ec] >> [b04-036:28997] >> /opt/FJSVtclang/GM-1.2.0-20/lib64/libtrtmet_c.so.1(MPI_Abort+0x2c) >> [0xffffffff00281bf0] >> [b04-036:28997] ./ex4f90 [0x292548] >> [b04-036:28997] ./ex4f90 [0x29165c] >> [b04-036:28997] /opt/FJSVxosmmm/lib64/libmpgpthread.so.1(_IO_funlockfile+0x5c) >> [0xffffffff121e1974] >> [b04-036:28997] ./ex4f90 [0x9f6748] >> [b04-036:28997] ./ex4f90 [0x9f0ea4] >> [b04-036:28997] ./ex4f90 [0x2c76a0] >> [b04-036:28997] ./ex4f90(MAIN__+0x38c) [0x10688c] >> [b04-036:28997] ./ex4f90(main+0xec) [0x268e91c] >> [b04-036:28997] /lib64/libc.so.6(__libc_start_main+0x194) [0xffffffff138cb81c] >> [b04-036:28997] ./ex4f90 [0x1063ac] >> [0]PETSC ERROR: >> ------------------------------------------------------------------------ >> [0]PETSC ERROR: Caught signal number 15 Terminate: Some process (or the batch >> system) has told this process to end >> [0]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger >> [0]PETSC ERROR: or see >> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind >> [0]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple Mac OS X to >> find memory corruption errors >> [0]PETSC ERROR: likely location of problem given in stack below >> [0]PETSC ERROR: --------------------- Stack Frames >> ------------------------------------ >> [0]PETSC ERROR: Note: The EXACT line numbers in the stack are not available, >> [0]PETSC ERROR: INSTEAD the line number of the start of the function >> [0]PETSC ERROR: is given. >> [0]PETSC ERROR: [0] F90Array1dCreate line 50 >> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c >> [0]PETSC ERROR: --------------------- Error Message >> -------------------------------------------------------------- >> [0]PETSC ERROR: Signal received >> [0]PETSC ERROR: Seehttp://www.mcs.anl.gov/petsc/documentation/faq.html for >> trouble shooting. >> [0]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015 >> [0]PETSC ERROR: ./ex4f90 on a petsc-3.6.3_debug named b04-036 by Unknown Wed >> Jun 1 13:23:41 2016 >> [0]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC >> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" >> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" --LD_SHARED= >> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >> --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 >> --with-scalapack-lib=-SCALAPACK >> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >> --with-fortran-interfaces=1 --with-debuy option -start_in_debugger or >> -on_error_attach_debugger >> [1]PETSC ERROR: or see >> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind >> [1]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple Mac OS X to >> find memory corruption errors >> [1]PETSC ERROR: likely location of problem given in stack below >> [1]PETSC ERROR: --------------------- Stack Frames >> ------------------------------------ >> [1]PETSC ERROR: Note: The EXACT line numbers in the stack are not available, >> [1]PETSC ERROR: INSTEAD the line number of the start of the function >> [1]PETSC ERROR: is given. >> [1]PETSC ERROR: [1] F90Array1dCreate line 50 >> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c >> [1]PETSC ERROR: --------------------- Error Message >> -------------------------------------------------------------- >> [1]PETSC ERROR: Signal received >> [1]PETSC ERROR: Seehttp://www.mcs.anl.gov/petsc/documentation/faq.html for >> trouble shooting. >> [1]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015 >> [1]PETSC ERROR: ./ex4f90 on a petsc-3.6.3_debug named b04-036 by Unknown Wed >> Jun 1 13:23:41 2016 >> [1]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC >> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" >> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" --LD_SHARED= >> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >> --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 >> --with-scalapack-lib=-SCALAPACK >> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >> --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 --with-hypre=1 >> --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4 >> [1]PETSC ERROR: #2 User provided function() line 0 in unknown file >> gging=1 --useThreads=0 --with-hypre=1 >> --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4 >> [0]PETSC ERROR: #2 User provided function() line 0 in unknown file >> [ERR.] PLE 0019 plexec One of MPI processes was >> aborted.(rank=0)(nid=0x04180034)(CODE=1938,793745140674134016,15104) >> [t00196 at b04-036 tutorials]$ >> [ERR.] PLE 0021 plexec The interactive job has aborted with the >> signal.(sig=24) >> [INFO] PJM 0083 pjsub Interactive job 5211401 completed. >> >> Thank you >> >> Yours sincerely, >> >> TAY wee-beng >> >> On 1/6/2016 12:21 PM, Satish Balay wrote: >>> Do PETSc examples using VecGetArrayF90() work? >>> >>> say src/vec/vec/examples/tutorials/ex4f90.F >>> >>> Satish >>> >>> On Tue, 31 May 2016, TAY wee-beng wrote: >>> >>>> Hi, >>>> >>>> I'm trying to run my MPI CFD code on Japan's K computer. My code can run >>>> if I >>>> didn't make use of the PETSc DMDAVecGetArrayF90 subroutine. If it's called >>>> >>>> call DMDAVecGetArrayF90(da_u,u_local,u_array,ierr) >>>> >>>> I get the error below. I have no problem with my code on other clusters >>>> using >>>> the new Intel compilers. I used to have problems with DM when using the >>>> old >>>> Intel compilers. Now on the K computer, I'm using Fujitsu's Fortran >>>> compiler. >>>> How can I troubleshoot? >>>> >>>> Btw, I also tested on the ex13f90 example and it didn't work too. The >>>> error is >>>> below. >>>> >>>> >>>> My code error: >>>> >>>> /* size_x,size_y,size_z 76x130x136*//* >>>> *//* total grid size = 1343680*//* >>>> *//* recommended cores (50k / core) = 26.87360000000000*//* >>>> *//* 0*//* >>>> *//* 1*//* >>>> *//* 1*//* >>>> *//*[3]PETSC ERROR: [1]PETSC ERROR: >>>> ------------------------------------------------------------------------*//* >>>> *//*[1]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, >>>> probably memory access out of range*//* >>>> *//*[1]PETSC ERROR: Try option -start_in_debugger or >>>> -on_error_attach_debugger*//* >>>> *//*[1]PETSC ERROR: or see >>>> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* >>>> *//*[1]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple Mac >>>> OS X >>>> to find memory corruption errors*//* >>>> *//*[1]PETSC ERROR: likely location of problem given in stack below*//* >>>> *//*[1]PETSC ERROR: --------------------- Stack Frames >>>> ------------------------------------*//* >>>> *//*[1]PETSC ERROR: Note: The EXACT line numbers in the stack are not >>>> available,*//* >>>> *//*[1]PETSC ERROR: INSTEAD the line number of the start of the >>>> function*//* >>>> *//*[1]PETSC ERROR: is given.*//* >>>> *//*[1]PETSC ERROR: [1] F90Array3dCreate line 244 >>>> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* >>>> *//* 1*//* >>>> *//*------------------------------------------------------------------------*//* >>>> *//*[3]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, >>>> probably memory access out of range*//* >>>> *//*[3]PETSC ERROR: Try option -start_in_debugger or >>>> -on_error_attach_debugger*//* >>>> *//*[3]PETSC ERROR: or see >>>> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* >>>> *//*[3]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple Mac >>>> OS X >>>> to find memory corruption errors*//* >>>> *//*[3]PETSC ERROR: likely location of problem given in stack below*//* >>>> *//*[3]PETSC ERROR: --------------------- Stack Frames >>>> ------------------------------------*//* >>>> *//*[0]PETSC ERROR: >>>> ------------------------------------------------------------------------*//* >>>> *//*[0]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, >>>> probably memory access out of range*//* >>>> *//*[0]PETSC ERROR: Try option -start_in_debugger or >>>> -on_error_attach_debugger*//* >>>> *//*[0]PETSC ERROR: or see >>>> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* >>>> *//*[0]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple Mac >>>> OS X >>>> to find memory corruption errors*//* >>>> *//*[0]PETSC ERROR: likely location of problem given in stack below*//* >>>> *//*[0]PETSC ERROR: --------------------- Stack Frames >>>> ------------------------------------*//* >>>> *//*[0]PETSC ERROR: Note: The EXACT line numbers in the stack are not >>>> available,*//* >>>> *//*[0]PETSC ERROR: INSTEAD the line number of the start of the >>>> function*//* >>>> *//*[0]PETSC ERROR: is given.*//* >>>> *//*[0]PETSC ERROR: [0] F90Array3dCreate line 244 >>>> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* >>>> *//*[0]PETSC ERROR: --------------------- Error Message >>>> ----------------------------------------- 1*//* >>>> *//*[2]PETSC ERROR: >>>> ------------------------------------------------------------------------*//* >>>> *//*[2]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, >>>> probably memory access out of range*//* >>>> *//*[2]PETSC ERROR: Try option -start_in_debugger or >>>> -on_error_attach_debugger*//* >>>> *//*[2]PETSC ERROR: or see >>>> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* >>>> *//*[2]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple Mac >>>> OS X >>>> to find memory corruption errors*//* >>>> *//*[2]PETSC ERROR: likely location of problem given in stack below*//* >>>> *//*[2]PETSC ERROR: --------------------- Stack Frames >>>> ------------------------------------*//* >>>> *//*[2]PETSC ERROR: Note: The EXACT line numbers in the stack are not >>>> available,*//* >>>> *//*[2]PETSC ERROR: INSTEAD the line number of the start of the >>>> function*//* >>>> *//*[2]PETSC ERROR: is given.*//* >>>> *//*[2]PETSC ERROR: [2] F90Array3dCreate line 244 >>>> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* >>>> *//*[2]PETSC ERROR: --------------------- Error Message >>>> -----------------------------------------[3]PETSC ERROR: Note: The EXACT >>>> line >>>> numbers in the stack are not available,*//* >>>> *//*[3]PETSC ERROR: INSTEAD the line number of the start of the >>>> function*//* >>>> *//*[3]PETSC ERROR: is given.*//* >>>> *//*[3]PETSC ERROR: [3] F90Array3dCreate line 244 >>>> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* >>>> *//*[3]PETSC ERROR: --------------------- Error Message >>>> --------------------------------------------------------------*//* >>>> *//*[3]PETSC ERROR: Signal received*//* >>>> *//*[3]PETSC ERROR: See >>>> http://www.mcs.anl.gov/petsc/documentation/faq.html >>>> for trouble shooting.*//* >>>> *//*[3]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015*//* >>>> *//*[3]PETSC ERROR: ./a-debug.out on a petsc-3.6.3_debug named b04-036 by >>>> Unknown Wed Jun 1 12:54:34 2016*//* >>>> *//*[3]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC >>>> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" >>>> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" >>>> --LD_SHARED= >>>> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >>>> --with-shared----------------------*//* >>>> *//*[0]PETSC ERROR: Signal received*//* >>>> *//*[0]PETSC ERROR: See >>>> http://www.mcs.anl.gov/petsc/documentation/faq.html >>>> for trouble shooting.*//* >>>> *//*[0]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015*//* >>>> *//*[0]PETSC ERROR: ./a-debug.out on a petsc-3.6.3_debug named b04-036 by >>>> Unknown Wed Jun 1 12:54:34 2016*//* >>>> *//*[0]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC >>>> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" >>>> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" >>>> --LD_SHARED= >>>> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >>>> --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 >>>> --with-scalapack-lib=-SCALAPACK >>>> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >>>> --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 >>>> --with-hypre=1 >>>> --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4*//* >>>> *//*[0]PETSC ERROR: #1 User provided function() line 0 in unknown >>>> file*//* >>>> *//*--------------------------------------------------------------------------*//* >>>> *//*[m---------------------*//* >>>> *//*[2]PETSC ERROR: Signal received*//* >>>> *//*[2]PETSC ERROR: See >>>> http://www.mcs.anl.gov/petsc/documentation/faq.html >>>> for trouble shooting.*//* >>>> *//*[2]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015*//* >>>> *//*[2]PETSC ERROR: ./a-debug.out on a petsc-3.6.3_debug named b04-036 by >>>> Unknown Wed Jun 1 12:54:34 2016*//* >>>> *//*[2]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC >>>> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" >>>> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" >>>> --LD_SHARED= >>>> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >>>> --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 >>>> --with-scalapack-lib=-SCALAPACK >>>> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >>>> --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 >>>> --with-hypre=1 >>>> --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4*//* >>>> *//*[2]PETSC ERROR: #1 User provided function() line 0 in unknown >>>> file*//* >>>> *//*--------------------------------------------------------------------------*//* >>>> *//*[m[1]PETSC ERROR: --------------------- Error Message >>>> --------------------------------------------------------------*//* >>>> *//*[1]PETSC ERROR: Signal received*//* >>>> *//*[1]PETSC ERROR: See >>>> http://www.mcs.anl.gov/petsc/documentation/faq.html >>>> for trouble shooting.*//* >>>> *//*[1]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015*//* >>>> *//*[1]PETSC ERROR: ./a-debug.out on a petsc-3.6.3_debug named b04-036 by >>>> Unknown Wed Jun 1 12:54:34 2016*//* >>>> *//*[1]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC >>>> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" >>>> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" >>>> --LD_SHARED= >>>> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >>>> --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 >>>> --with-scalapack-lib=-SCALAPACK >>>> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >>>> --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 >>>> --with-hypre=1 >>>> --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4*//* >>>> *//*[1]PETSC ERROR: #1 User provided function() line 0 ilibraries=0 >>>> --with-blas-lapack-lib=-SSL2 --with-scalapack-lib=-SCALAPACK >>>> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >>>> --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 >>>> --with-hypre=1 >>>> --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4*//* >>>> *//*[3]PETSC ERROR: #1 User provided function() line 0 in unknown >>>> file*//* >>>> *//*--------------------------------------------------------------------------*//* >>>> *//*[mpi::mpi-api::mpi-abort]*//* >>>> *//*MPI_ABORT was invoked on rank 3 in communicator MPI_COMM_WORLD*//* >>>> *//*with errorcode 59.*//* >>>> *//* >>>> *//*NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI >>>> processes.*//* >>>> *//*You may or may not see output from other processes, depending on*//* >>>> *//*exactly when Open MPI kills them.*//* >>>> *//*--------------------------------------------------------------------------*//* >>>> *//*[b04-036:28416] >>>> /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_errmgr_base_error_abort+0x84) >>>> [0xffffffff11360404]*//* >>>> *//*[b04-036:28416] >>>> /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(ompi_mpi_abort+0x51c) >>>> [0xffffffff1110391c]*//* >>>> *//*[b04-036:28416] /opt/FJSVtclang/GM-1.2.0-2pi::mpi-api::mpi-abort]*//* >>>> *//*MPI_ABORT was invoked on rank 2 in communicator MPI_COMM_WORLD*//* >>>> *//*with errorcode 59.*/ >>>> >>>> ex13f90 error: >>>> >>>> >>>> /*[t00196 at b04-036 tutorials]$ mpiexec -np 2 ./ex13f90*//* >>>> *//*jwe1050i-w The hardware barrier couldn't be used and continues >>>> processing >>>> using the software barrier.*//* >>>> *//*taken to (standard) corrective action, execution continuing.*//* >>>> *//*jwe1050i-w The hardware barrier couldn't be used and continues >>>> processing >>>> using the software barrier.*//* >>>> *//*taken to (standard) corrective action, execution continuing.*//* >>>> *//* Hi! We're solving van der Pol using 2 processes.*//* >>>> *//* >>>> *//* t x1 x2*//* >>>> *//*[1]PETSC ERROR: >>>> ------------------------------------------------------------------------*//* >>>> *//*[1]PETSC ERROR: Caught signal number 10 BUS: Bus Error, possibly >>>> illegal >>>> memory access*//* >>>> *//*[1]PETSC ERROR: Try option -start_in_debugger or >>>> -on_error_attach_debugger*//* >>>> *//*[0]PETSC ERROR: >>>> ------------------------------------------------------------------------*//* >>>> *//*[0]PETSC ERROR: Caught signal number 10 BUS: Bus Error, possibly >>>> illegal >>>> memory access*//* >>>> *//*[0]PETSC ERROR: Try option -start_in_debugger or >>>> -on_error_attach_debugger*//* >>>> *//*[0]PETSC ERROR: or see >>>> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* >>>> *//*[0]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple Mac >>>> OS X >>>> to find memory corruption errors*//* >>>> *//*[1]PETSC ERROR: or see >>>> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* >>>> *//*[1]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple Mac >>>> OS X >>>> to find memory corruption errors*//* >>>> *//*[1]PETSC ERROR: likely location of problem given in stack below*//* >>>> *//*[1]PETSC ERROR: --------------------- Stack Frames >>>> ------------------------------------*//* >>>> *//*[1]PETSC ERROR: Note: The EXACT line numbers in the stack are not >>>> available,*//* >>>> *//*[1]PETSC ERROR: INSTEAD the line number of the start of the >>>> function*//* >>>> *//*[1]PETSC ERROR: is given.*//* >>>> *//*[1]PETSC ERROR: [1] F90Array4dCreate line 337 >>>> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* >>>> *//*[0]PETSC ERROR: likely location of problem given in stack below*//* >>>> *//*[0]PETSC ERROR: --------------------- Stack Frames >>>> ------------------------------------*//* >>>> *//*[0]PETSC ERROR: Note: The EXACT line numbers in the stack are not >>>> available,*//* >>>> *//*[0]PETSC ERROR: INSTEAD the line number of the start of the >>>> function*//* >>>> *//*[0]PETSC ERROR: is given.*//* >>>> *//*[0]PETSC ERROR: [0] F90Array4dCreate line 337 >>>> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* >>>> *//*[1]PETSC ERROR: --------------------- Error Message >>>> --------------------------------------------------------------*//* >>>> *//*[1]PETSC ERROR: Signal received*//* >>>> *//*[1]PETSC ERROR: See >>>> http://www.mcs.anl.gov/petsc/documentation/faq.html >>>> for trouble shooting.*//* >>>> *//*[1]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015*//* >>>> *//*[1]PETSC ERROR: ./ex13f90 on a petsc-3.6.3_debug named b04-036 by >>>> Unknown >>>> Wed Jun 1 13:04:34 2016*//* >>>> *//*[1]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC >>>> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" >>>> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" >>>> --LD_SHARED= >>>> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >>>> --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 >>>> --with-scalapack-lib=-SCALAPACK >>>> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >>>> --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 >>>> --with-hypre=1 >>>> --with-hyp*//* >>>> */ >>>> >>>> >>>> >> -------------- next part -------------- An HTML attachment was scrubbed... URL: -------------- next part -------------- Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC ================================================================================ ================================================================================ Starting Configure Run at Thu Jun 2 10:39:34 2016 Configure Options: --configModules=PETSc.Configure --optionsModule=config.compilerOptions --with-cc=mpifcc --with-cxx=mpiFCC --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" --LD_SHARED= --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 --with-scalapack-lib=-SCALAPACK --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_patch_debug --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 --with-hypre=1 --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4 Working directory: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 Machine platform: ('Linux', 'd01-037', '2.6.25.8', '#1 SMP Wed Jan 6 11:32:25 JST 2016', 's64fx', 's64fx') Python version: 2.6.2 (r262:71600, Dec 20 2011, 15:18:11) [GCC 4.2.4] ================================================================================ Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC ================================================================================ TEST configureExternalPackagesDir from config.framework(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/framework.py:832) TESTING: configureExternalPackagesDir from config.framework(config/BuildSystem/config/framework.py:832) ================================================================================ TEST configureDebuggers from config.utilities.debuggers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/debuggers.py:22) TESTING: configureDebuggers from config.utilities.debuggers(config/BuildSystem/config/utilities/debuggers.py:22) Find a default debugger and determine its arguments Checking for program /opt/FJSVtclang/check/gdb...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/gdb...not found Checking for program /opt/kusu/bin/gdb...not found Checking for program /opt/kusu/sbin/gdb...not found Checking for program /usr/pgsql-9.0/bin/gdb...not found Checking for program /usr/local/bin/gdb...not found Checking for program /bin/gdb...not found Checking for program /usr/bin/gdb...not found Checking for program /home/hp150306/t00196/bin/gdb...not found Checking for program /home/hp150306/t00196/shortcut/gdb...not found Checking for program /opt/FJSVxosmmm/sbin/gdb...not found Checking for program /home/hp150306/t00196/gdb...not found Checking for program /opt/FJSVtclang/check/dbx...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/dbx...not found Checking for program /opt/kusu/bin/dbx...not found Checking for program /opt/kusu/sbin/dbx...not found Checking for program /usr/pgsql-9.0/bin/dbx...not found Checking for program /usr/local/bin/dbx...not found Checking for program /bin/dbx...not found Checking for program /usr/bin/dbx...not found Checking for program /home/hp150306/t00196/bin/dbx...not found Checking for program /home/hp150306/t00196/shortcut/dbx...not found Checking for program /opt/FJSVxosmmm/sbin/dbx...not found Checking for program /home/hp150306/t00196/dbx...not found Checking for program /opt/FJSVtclang/check/xdb...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/xdb...not found Checking for program /opt/kusu/bin/xdb...not found Checking for program /opt/kusu/sbin/xdb...not found Checking for program /usr/pgsql-9.0/bin/xdb...not found Checking for program /usr/local/bin/xdb...not found Checking for program /bin/xdb...not found Checking for program /usr/bin/xdb...not found Checking for program /home/hp150306/t00196/bin/xdb...not found Checking for program /home/hp150306/t00196/shortcut/xdb...not found Checking for program /opt/FJSVxosmmm/sbin/xdb...not found Checking for program /home/hp150306/t00196/xdb...not found Checking for program /opt/FJSVtclang/check/dsymutil...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/dsymutil...not found Checking for program /opt/kusu/bin/dsymutil...not found Checking for program /opt/kusu/sbin/dsymutil...not found Checking for program /usr/pgsql-9.0/bin/dsymutil...not found Checking for program /usr/local/bin/dsymutil...not found Checking for program /bin/dsymutil...not found Checking for program /usr/bin/dsymutil...not found Checking for program /home/hp150306/t00196/bin/dsymutil...not found Checking for program /home/hp150306/t00196/shortcut/dsymutil...not found Checking for program /opt/FJSVxosmmm/sbin/dsymutil...not found Checking for program /home/hp150306/t00196/dsymutil...not found Defined make macro "DSYMUTIL" to "true" ================================================================================ TEST configureGit from config.sourceControl(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/sourceControl.py:24) TESTING: configureGit from config.sourceControl(config/BuildSystem/config/sourceControl.py:24) Find the Git executable Checking for program /opt/FJSVtclang/check/git...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/git...not found Checking for program /opt/kusu/bin/git...not found Checking for program /opt/kusu/sbin/git...not found Checking for program /usr/pgsql-9.0/bin/git...not found Checking for program /usr/local/bin/git...not found Checking for program /bin/git...not found Checking for program /usr/bin/git...not found Checking for program /home/hp150306/t00196/bin/git...not found Checking for program /home/hp150306/t00196/shortcut/git...not found Checking for program /opt/FJSVxosmmm/sbin/git...not found Checking for program /home/hp150306/t00196/git...not found ================================================================================ TEST configureCLanguage from PETSc.options.languages(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/languages.py:27) TESTING: configureCLanguage from PETSc.options.languages(config/PETSc/options/languages.py:27) Choose whether to compile the PETSc library using a C or C++ compiler C language is C Defined "CLANGUAGE_C" to "1" ================================================================================ TEST configureDirectories from PETSc.options.petscdir(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/petscdir.py:23) TESTING: configureDirectories from PETSc.options.petscdir(config/PETSc/options/petscdir.py:23) Checks PETSC_DIR and sets if not set Version Information: #define PETSC_VERSION_RELEASE 1 #define PETSC_VERSION_MAJOR 3 #define PETSC_VERSION_MINOR 6 #define PETSC_VERSION_SUBMINOR 3 #define PETSC_VERSION_PATCH 0 #define PETSC_VERSION_DATE "Dec, 03, 2015" #define PETSC_VERSION_GIT "v3.6.2-37-g6fc57b5" #define PETSC_VERSION_DATE_GIT "2015-12-03 23:02:05 -0600" #define PETSC_VERSION_(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_LT(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_LE(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_GT(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_GE(MAJOR,MINOR,SUBMINOR) \ Defined make macro "DIR" to "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3" ================================================================================ TEST getDatafilespath from PETSc.options.dataFilesPath(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/dataFilesPath.py:29) TESTING: getDatafilespath from PETSc.options.dataFilesPath(config/PETSc/options/dataFilesPath.py:29) Checks what DATAFILESPATH should be ================================================================================ TEST configureInstallationMethod from PETSc.options.petscclone(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/petscclone.py:20) TESTING: configureInstallationMethod from PETSc.options.petscclone(config/PETSc/options/petscclone.py:20) This is a tarball installation ================================================================================ TEST configureArchitecture from PETSc.options.arch(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/arch.py:25) TESTING: configureArchitecture from PETSc.options.arch(config/PETSc/options/arch.py:25) Checks PETSC_ARCH and sets if not set Defined "ARCH" to ""petsc-3.6.3_patch_debug"" ================================================================================ TEST setInstallDir from PETSc.options.installDir(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/installDir.py:35) TESTING: setInstallDir from PETSc.options.installDir(config/PETSc/options/installDir.py:35) setup installDir to either prefix or if that is not set to PETSC_DIR/PETSC_ARCH ================================================================================ TEST saveReconfigure from PETSc.options.installDir(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/installDir.py:74) TESTING: saveReconfigure from PETSc.options.installDir(config/PETSc/options/installDir.py:74) ================================================================================ TEST cleanInstallDir from PETSc.options.installDir(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/installDir.py:67) TESTING: cleanInstallDir from PETSc.options.installDir(config/PETSc/options/installDir.py:67) ================================================================================ TEST configureInstallDir from PETSc.options.installDir(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/installDir.py:51) TESTING: configureInstallDir from PETSc.options.installDir(config/PETSc/options/installDir.py:51) Makes installDir subdirectories if it does not exist for both prefix install location and PETSc work install location Changed persistence directory to /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-3.6.3_patch_debug/lib/petsc/conf ================================================================================ TEST restoreReconfigure from PETSc.options.installDir(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/installDir.py:87) TESTING: restoreReconfigure from PETSc.options.installDir(config/PETSc/options/installDir.py:87) ================================================================================ TEST setExternalPackagesDir from PETSc.options.externalpackagesdir(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/externalpackagesdir.py:15) TESTING: setExternalPackagesDir from PETSc.options.externalpackagesdir(config/PETSc/options/externalpackagesdir.py:15) ================================================================================ TEST cleanExternalpackagesDir from PETSc.options.externalpackagesdir(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/externalpackagesdir.py:22) TESTING: cleanExternalpackagesDir from PETSc.options.externalpackagesdir(config/PETSc/options/externalpackagesdir.py:22) ================================================================================ TEST printEnvVariables from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1538) TESTING: printEnvVariables from config.setCompilers(config/BuildSystem/config/setCompilers.py:1538) **** printenv **** Timezone_ntp_server1=10.0.160.15 Timezone_ntp_server2=10.0.160.1 DEPOT_REPOS_ROOT=/depot/repos NII_PARENTIPS=10.246.0.65;10.0.2.131 PJM_O_WORKDIR=/volume2/home/hp150306/t00196/source/petsc-3.6.3 NII_PGID= DEPOT_AUTOINST_ROOT=/depot/repos/instconf InstallerServeNFS=1 CFMBaseDir=/opt/kusu/cfm OMPI_CKPTCONFIG=0x00 PJM_O_SHELL=/bin/bash MANPATH=:/opt/kusu/man Timezone_utc=0 Timezone_zone=Asia/Tokyo KUSU_TMP=/tmp root_password_auth=off PYTHONPATH=/opt/primitive/lib64/python2.6/site-packages:/opt/primitive/lib/python2.6/site-packages:/opt/primitive/lib64/python2.4/site-packages:/opt/primitive/lib/python2.4/site-packages:/opt/kusu/lib64/python:/opt/kusu/lib/python: KUSU_ROOT=/opt/kusu PublicDNSZone=k NII_PEERIP=0 DEPOT_DOCS_ROOT=/depot/www/kits NII_HAGROUP=, InstNum= TUNING_XINET_MAX_CLIENTS=100 PIXIE_ROOT=/tftpboot/kusu Keyboard=jp106 NII_PARENTIP=10.224.0.92 PJM_JOBID=5213057 LS_COLORS=no=00:fi=00:di=00;34:ln=00;36:pi=40;33:so=00;35:bd=40;33;01:cd=40;33;01:or=01;05;37;41:mi=01;05;37;41:ex=00;32:*.cmd=00;32:*.exe=00;32:*.com=00;32:*.btm=00;32:*.bat=00;32:*.sh=00;32:*.csh=00;32:*.tar=00;31:*.tgz=00;31:*.arj=00;31:*.taz=00;31:*.lzh=00;31:*.zip=00;31:*.z=00;31:*.Z=00;31:*.gz=00;31:*.bz2=00;31:*.bz=00;31:*.tz=00;31:*.rpm=00;31:*.cpio=00;31:*.jpg=00;35:*.gif=00;35:*.bmp=00;35:*.xbm=00;35:*.xpm=00;35:*.png=00;35:*.tif=00;35: Env_base=K-1.2.0-20-1 DB_POOLER_MAX_CLIENTS=32768 snmp_trap_receivers= NII_NGTYPE=compute-diskless PJM_DPREFIX=#PJM LMGRD_PATH= PJM_O_PATH=/usr/lib64/qt-3.3/bin:/opt/local/openssh/bin:/opt/FJSVtclang/check:/opt/FJSVtclang/GM-1.2.0-20/bin:/opt/FJSVtclang/1.2.0/util/bin:/usr/local/bin:/bin:/usr/bin:/usr/local/bin/SU/bin:/opt/local/gfarm/bin:/opt/local/Python-2.7.3/bin:/home/hp150306/t00196/bin:/home/hp150306/t00196/shortcut:/home/hp150306/t00196/bin:/home/hp150306/t00196/shortcut SYSLOG_SERVER=disabled passwordless_root_on_compute=on SHLVL=1 NII_NICDEF0=tofu0|10.246.0.97|255.224.0.0|10.224.0.0|-tofu0|10.255.255.254|0||02:00:10:17:01:c3|provision PETSC_ARCH=petsc-3.6.3_patch_debug KUSU_LOGFILE=/var/log/kusu/kusu.log NII_NID=9242 PETSC_DIR=/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 CFM_SERVICE=multicast MODULESHOME=/usr/share/Modules KUSU_MAXLOGNUM=10 NII_INSTALLERS=10.224.0.92 PRIMITIVE_ROOT=/opt/primitive DEPOT_CONTRIB_ROOT=/depot/contrib MULTICAST_ADDR=239.0.0.80 NII_HOSTNAME=d01-037 PrimaryInstaller=cs01p03 MASTER_UUID=KUSU NII_BOOTNIC=tofu0 TMPDIR=./ MODULEPATH=/usr/share/Modules/modulefiles:/etc/modulefiles: NII_NFSROOTSERVER=10.224.0.92 NII_BOOTIP=10.246.0.97 dns1=127.0.0.1 InstallerServeDNS=1 FJPNCKPT_CONFIG=0x00 KUSUSNMPD_LOG_SIZE=5000 KUSU_MAXLOGSIZE=10485760 PROVISION=KUSU InstallerServeDHCP=1 ssh_port=22 TUNING_ENABLED=1 LM_LICENSE_FILE= PJM_JOBNAME=STDIN LD_LIBRARY_PATH=/opt/FJSVpxtof/sparc64fx/lib64:/opt/FJSVtclang/GM-1.2.0-20/lib64:/opt/FJSVpnavi/sparc64fx/lib64:/opt/FJSVXosSclib/lib64 Timezone_ntp_server=10.0.160.14 KUSU_DIST_ARCH=s64fx G_BROKEN_FILENAMES=1 _=./configure DEPOT_REPOS_SCRIPTS=/depot/repos/custom_scripts NII_REPO=/repos/1002 TOFU_HOME=/opt/FJSVpxtof/sparc64fx Language=en_US KusuAuthScheme=files PGBOUNCER_LOG_SIZE=100 KUSU_DHCP_TIMEOUT=120 InstallerServeNTP=1 NII_OSTYPE=xtcos-1.3-sparc64fx PJM_O_HOST=fe01p08 KUSU_DB_ENGINE=postgres NII_REPOID=1002 KUSU_LOGLEVEL=DEBUG NII_INSTALLTYPE=diskless NII_SNMPD=10.224.0.92 NII_NGID=18 KUSU_HEARTBEAT_INTERFACE=bond0 PJM_JOBDIR=/volume2/home/hp150306/t00196/source/petsc-3.6.3 DEPOT_REPOS_POST=/depot/repos/post_scripts DB_POOLER_POOL_SIZE=50000 ssh_old_port=22 NII_DBSERVERPORT=6432 DB_POOLER_PORT=6432 PJM_O_LOGNAME=t00196 PATH=/opt/FJSVtclang/check:/opt/FJSVtclang/GM-1.2.0-20/bin:/opt/kusu/bin:/opt/kusu/sbin:/usr/pgsql-9.0/bin:/usr/local/bin:/bin:/usr/bin:/home/hp150306/t00196/bin:/home/hp150306/t00196/shortcut:/opt/FJSVxosmmm/sbin PJM_ENVIRONMENT=INTERACT NII_DBSERVERIP=10.0.160.20 TERM=xterm KUSU_INSTALLER_GW=10.1.161.254 DNSZone=k PRESERVE_NODE_IP=1 PJM_O_HOME=/home/hp150306/t00196 CFM_PROTOCOL=broadcast NII_NFSROOTOPTS=rw,hard,intr,nolock,async,dev,exec,suid HOME=/home/hp150306/t00196 DEPOT_UPDATES_ROOT=/depot/updates NII_EXTRAID=k-comp_0x02160035 MPI_HOME=/opt/FJSVtclang/GM-1.2.0-20 InstallerServeNIS=0 TUNING_TFTP_MAX_CLIENTS=100 DEPOT_IMAGES_ROOT=/depot/images KUSU_EVENT_LOGFILE=/var/log/kusu/kusu-events.log DB_POOLER_ENABLED=1 TUNING_SSH_MAX_CLIENTS=200 NII_NFSROOTPATH=/export/nfsroot/d01-037 LOADEDMODULES= DEPOT_KITS_ROOT=/depot/kits PJM_O_MAIL=/var/spool/mail/t00196 KUSU_VERSION=2.1 PWD=/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 PJM_O_LANG=en_US.UTF-8 ================================================================================ TEST resetEnvCompilers from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1545) TESTING: resetEnvCompilers from config.setCompilers(config/BuildSystem/config/setCompilers.py:1545) ================================================================================ TEST checkEnvCompilers from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1575) TESTING: checkEnvCompilers from config.setCompilers(config/BuildSystem/config/setCompilers.py:1575) ================================================================================ TEST checkMPICompilerOverride from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1510) TESTING: checkMPICompilerOverride from config.setCompilers(config/BuildSystem/config/setCompilers.py:1510) Check if --with-mpi-dir is used along with CC CXX or FC compiler options. This usually prevents mpi compilers from being used - so issue a warning ================================================================================ TEST requireMpiLdPath from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1529) TESTING: requireMpiLdPath from config.setCompilers(config/BuildSystem/config/setCompilers.py:1529) OpenMPI wrappers require LD_LIBRARY_PATH set ================================================================================ TEST checkVendor from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:402) TESTING: checkVendor from config.setCompilers(config/BuildSystem/config/setCompilers.py:402) Determine the compiler vendor Compiler vendor is "" ================================================================================ TEST checkInitialFlags from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:412) TESTING: checkInitialFlags from config.setCompilers(config/BuildSystem/config/setCompilers.py:412) Initialize the compiler and linker flags Pushing language C Initialized CFLAGS to -Xg -O0 Initialized CFLAGS to -Xg -O0 Initialized LDFLAGS to Popping language C Pushing language CUDA Initialized CUDAFLAGS to Initialized CUDAFLAGS to Initialized LDFLAGS to Popping language CUDA Pushing language Cxx Initialized CXXFLAGS to -Xg -O0 Initialized CXX_CXXFLAGS to Initialized LDFLAGS to Popping language Cxx Pushing language FC Initialized FFLAGS to -X9 -O0 Initialized FFLAGS to -X9 -O0 Initialized LDFLAGS to Popping language FC Initialized CPPFLAGS to Initialized CUDAPPFLAGS to Initialized CXXCPPFLAGS to Initialized CC_LINKER_FLAGS to [] Initialized CXX_LINKER_FLAGS to [] Initialized FC_LINKER_FLAGS to [] Initialized CUDAC_LINKER_FLAGS to [] Initialized sharedLibraryFlags to [] Initialized dynamicLibraryFlags to [] ================================================================================ TEST checkCCompiler from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:538) TESTING: checkCCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:538) Locate a functional C compiler Checking for program /opt/FJSVtclang/check/mpifcc...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/mpifcc...found Defined make macro "CC" to "mpifcc" Pushing language C All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lpetsc-ufod4vtr9mqHvKIQiVAm Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest Popping language C ================================================================================ TEST checkCPreprocessor from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:571) TESTING: checkCPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:571) Locate a functional C preprocessor Checking for program /opt/FJSVtclang/check/mpifcc...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/mpifcc...found Defined make macro "CPP" to "mpifcc -E" Pushing language C Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c" #line 1 "/usr/include/stdlib.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/stdlib.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef int wchar_t; #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 34 "/usr/include/stdlib.h" #line 95 "/usr/include/stdlib.h" typedef struct { int quot; int rem; } div_t; typedef struct { long int quot; long int rem; } ldiv_t; typedef struct { long long int quot; long long int rem; } lldiv_t; extern size_t __ctype_get_mb_cur_max (void) ; extern double atof (const char *__nptr) ; extern int atoi (const char *__nptr) ; extern long int atol (const char *__nptr) ; extern long long int atoll (const char *__nptr) ; extern double strtod (const char * __nptr, char ** __endptr) ; extern float strtof (const char * __nptr, char ** __endptr) ; extern long double strtold (const char * __nptr, char ** __endptr) ; extern long int strtol (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long int strtoul (const char * __nptr, char ** __endptr, int __base) ; extern long long int strtoq (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long long int strtouq (const char * __nptr, char ** __endptr, int __base) ; extern long long int strtoll (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long long int strtoull (const char * __nptr, char ** __endptr, int __base) ; #line 274 "/usr/include/stdlib.h" #line 305 "/usr/include/stdlib.h" extern char *l64a (long int __n) ; extern long int a64l (const char *__s) ; #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; typedef char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 321 "/usr/include/stdlib.h" extern long int random (void) ; extern void srandom (unsigned int __seed) ; extern char *initstate (unsigned int __seed, char *__statebuf, size_t __statelen) ; extern char *setstate (char *__statebuf) ; struct random_data { int32_t *fptr; int32_t *rptr; int32_t *state; int rand_type; int rand_deg; int rand_sep; int32_t *end_ptr; }; extern int random_r (struct random_data * __buf, int32_t * __result) ; extern int srandom_r (unsigned int __seed, struct random_data *__buf) ; extern int initstate_r (unsigned int __seed, char * __statebuf, size_t __statelen, struct random_data * __buf) ; extern int setstate_r (char * __statebuf, struct random_data * __buf) ; extern int rand (void) ; extern void srand (unsigned int __seed) ; extern int rand_r (unsigned int *__seed) ; extern double drand48 (void) ; extern double erand48 (unsigned short int __xsubi[3]) ; extern long int lrand48 (void) ; extern long int nrand48 (unsigned short int __xsubi[3]) ; extern long int mrand48 (void) ; extern long int jrand48 (unsigned short int __xsubi[3]) ; extern void srand48 (long int __seedval) ; extern unsigned short int *seed48 (unsigned short int __seed16v[3]) ; extern void lcong48 (unsigned short int __param[7]) ; struct drand48_data { unsigned short int __x[3]; unsigned short int __old_x[3]; unsigned short int __c; unsigned short int __init; unsigned long long int __a; }; extern int drand48_r (struct drand48_data * __buffer, double * __result) ; extern int erand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, double * __result) ; extern int lrand48_r (struct drand48_data * __buffer, long int * __result) ; extern int nrand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, long int * __result) ; extern int mrand48_r (struct drand48_data * __buffer, long int * __result) ; extern int jrand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, long int * __result) ; extern int srand48_r (long int __seedval, struct drand48_data *__buffer) ; extern int seed48_r (unsigned short int __seed16v[3], struct drand48_data *__buffer) ; extern int lcong48_r (unsigned short int __param[7], struct drand48_data *__buffer) ; extern void *malloc (size_t __size) ; extern void *calloc (size_t __nmemb, size_t __size) ; extern void *realloc (void *__ptr, size_t __size) ; extern void free (void *__ptr) ; extern void cfree (void *__ptr) ; #line 1 "/usr/include/alloca.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/alloca.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 26 "/usr/include/alloca.h" extern void *alloca (size_t __size) ; #line 498 "/usr/include/stdlib.h" extern void *valloc (size_t __size) ; extern int posix_memalign (void **__memptr, size_t __alignment, size_t __size) ; extern void abort (void) ; extern int atexit (void (*__func) (void)) ; extern int on_exit (void (*__func) (int __status, void *__arg), void *__arg) ; extern void exit (int __status) ; extern void _Exit (int __status) ; extern char *getenv (const char *__name) ; extern char *__secure_getenv (const char *__name) ; extern int putenv (char *__string) ; extern int setenv (const char *__name, const char *__value, int __replace) ; extern int unsetenv (const char *__name) ; extern int clearenv (void) ; extern char *mktemp (char *__template) ; extern int mkstemp (char *__template) ; #line 607 "/usr/include/stdlib.h" extern char *mkdtemp (char *__template) ; #line 638 "/usr/include/stdlib.h" extern int system (const char *__command) ; #line 655 "/usr/include/stdlib.h" extern char *realpath (const char * __name, char * __resolved) ; typedef int (*__compar_fn_t) (const void *, const void *); extern void *bsearch (const void *__key, const void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; extern void qsort (void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; extern int abs (int __x) ; extern long int labs (long int __x) ; extern long long int llabs (long long int __x) ; extern div_t div (int __numer, int __denom) ; extern ldiv_t ldiv (long int __numer, long int __denom) ; extern lldiv_t lldiv (long long int __numer, long long int __denom) ; extern char *ecvt (double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *fcvt (double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *gcvt (double __value, int __ndigit, char *__buf) ; extern char *qecvt (long double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *qfcvt (long double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *qgcvt (long double __value, int __ndigit, char *__buf) ; extern int ecvt_r (double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int fcvt_r (double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int qecvt_r (long double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int qfcvt_r (long double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int mblen (const char *__s, size_t __n) ; extern int mbtowc (wchar_t * __pwc, const char * __s, size_t __n) ; extern int wctomb (char *__s, wchar_t __wchar) ; extern size_t mbstowcs (wchar_t * __pwcs, const char * __s, size_t __n) ; extern size_t wcstombs (char * __s, const wchar_t * __pwcs, size_t __n) ; extern int rpmatch (const char *__response) ; #line 820 "/usr/include/stdlib.h" extern int posix_openpt (int __oflag) ; #line 851 "/usr/include/stdlib.h" #line 862 "/usr/include/stdlib.h" extern int getloadavg (double __loadavg[], int __nelem) ; #line 879 "/usr/include/stdlib.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Popping language C ================================================================================ TEST checkCUDACompiler from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:612) TESTING: checkCUDACompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:612) Locate a functional CUDA compiler ================================================================================ TEST checkCUDAPreprocessor from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:652) TESTING: checkCUDAPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:652) Locate a functional CUDA preprocessor ================================================================================ TEST checkCxxCompiler from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:764) TESTING: checkCxxCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:764) Locate a functional Cxx compiler Checking for program /opt/FJSVtclang/check/mpiFCC...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/mpiFCC...found Defined make macro "CXX" to "mpiFCC" Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lpetsc-ufod4vtr9mqHvKIQiVAm Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest Popping language Cxx ================================================================================ TEST checkCxxPreprocessor from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:802) TESTING: checkCxxPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:802) Locate a functional Cxx preprocessor Checking for program /opt/FJSVtclang/check/mpiFCC...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/mpiFCC...found Defined make macro "CXXCPP" to "mpiFCC -E" Pushing language Cxx Executing: mpiFCC -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/FCC.pre" #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conffix.h" extern "C" { } #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/cstdlib" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_prolog.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 33 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 161 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 354 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 59 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_stlport_version.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl_user_config.h" #line 74 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 90 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config_compat.h" #line 28 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config_compat.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config_compat.h" #line 49 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config_compat.h" #line 95 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_site_config.h" #line 30 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_site_config.h" #line 99 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/config/stlcomp.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/config/stl_fujitsu.h" #line 18 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/config/stl_fujitsu.h" #line 28 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/config/stl_fujitsu.h" #line 53 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/config/stlcomp.h" #line 128 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/config/stlcomp.h" #line 102 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/config/stl_confix.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/config/stl_confix.h" #line 111 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 121 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 185 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 196 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 262 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 276 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 297 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 305 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 313 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 321 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 338 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 351 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 372 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 417 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 468 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 496 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 507 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 517 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 542 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 556 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 565 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" namespace std { } namespace __std_alias = std; #line 623 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 643 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 688 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" namespace stlp_priv { using namespace std; } #line 713 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" namespace stlport = std; namespace _STL = std; #line 758 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 784 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 817 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 857 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 871 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 890 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 921 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 936 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 957 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 994 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1022 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1035 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1060 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1091 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1104 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1114 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1148 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1197 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1219 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1237 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 19 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_prolog.h" #line 25 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/cstdlib" #line 1 "/usr/include/stdlib.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/stdlib.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 25 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 35 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 38 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 52 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 34 "/usr/include/stdlib.h" extern "C" { #line 1 "/usr/include/bits/waitflags.h" #line 43 "/usr/include/stdlib.h" #line 1 "/usr/include/bits/waitstatus.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 66 "/usr/include/bits/waitstatus.h" union wait { int w_status; struct { #line 79 "/usr/include/bits/waitstatus.h" unsigned int:16; unsigned int __w_retcode:8; unsigned int __w_coredump:1; unsigned int __w_termsig:7; } __wait_terminated; struct { #line 93 "/usr/include/bits/waitstatus.h" unsigned int:16; unsigned int __w_stopsig:8; unsigned int __w_stopval:8; } __wait_stopped; }; #line 44 "/usr/include/stdlib.h" #line 57 "/usr/include/stdlib.h" #line 75 "/usr/include/stdlib.h" #line 83 "/usr/include/stdlib.h" #line 95 "/usr/include/stdlib.h" typedef struct { int quot; int rem; } div_t; typedef struct { long int quot; long int rem; } ldiv_t; typedef struct { long long int quot; long long int rem; } lldiv_t; extern size_t __ctype_get_mb_cur_max (void) ; extern double atof (const char *__nptr) ; extern int atoi (const char *__nptr) ; extern long int atol (const char *__nptr) ; extern long long int atoll (const char *__nptr) ; extern double strtod (const char * __nptr, char ** __endptr) ; extern float strtof (const char * __nptr, char ** __endptr) ; extern long double strtold (const char * __nptr, char ** __endptr) ; extern long int strtol (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long int strtoul (const char * __nptr, char ** __endptr, int __base) ; extern long long int strtoq (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long long int strtouq (const char * __nptr, char ** __endptr, int __base) ; extern long long int strtoll (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long long int strtoull (const char * __nptr, char ** __endptr, int __base) ; #line 274 "/usr/include/stdlib.h" #line 305 "/usr/include/stdlib.h" extern char *l64a (long int __n) ; extern long int a64l (const char *__s) ; #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" extern "C" { #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 57 "/usr/include/sys/types.h" typedef __ino64_t ino64_t; typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 95 "/usr/include/sys/types.h" typedef __off64_t off64_t; typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/time.h" #line 22 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/time.h" #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" typedef __clock_t clock_t; typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 30 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/time.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/time.h" #line 134 "/usr/include/sys/types.h" typedef __useconds_t useconds_t; typedef __suseconds_t suseconds_t; #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 25 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 35 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 38 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 52 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; typedef char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/time.h" #line 22 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/time.h" #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 30 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/time.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef long int __fd_mask; typedef struct { __fd_mask fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern "C" { extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); } #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blksize_t blksize_t; typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" typedef __blkcnt64_t blkcnt64_t; typedef __fsblkcnt64_t fsblkcnt64_t; typedef __fsfilcnt64_t fsfilcnt64_t; #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" } #line 321 "/usr/include/stdlib.h" extern long int random (void) ; extern void srandom (unsigned int __seed) ; extern char *initstate (unsigned int __seed, char *__statebuf, size_t __statelen) ; extern char *setstate (char *__statebuf) ; struct random_data { int32_t *fptr; int32_t *rptr; int32_t *state; int rand_type; int rand_deg; int rand_sep; int32_t *end_ptr; }; extern int random_r (struct random_data * __buf, int32_t * __result) ; extern int srandom_r (unsigned int __seed, struct random_data *__buf) ; extern int initstate_r (unsigned int __seed, char * __statebuf, size_t __statelen, struct random_data * __buf) ; extern int setstate_r (char * __statebuf, struct random_data * __buf) ; extern int rand (void) ; extern void srand (unsigned int __seed) ; extern int rand_r (unsigned int *__seed) ; extern double drand48 (void) ; extern double erand48 (unsigned short int __xsubi[3]) ; extern long int lrand48 (void) ; extern long int nrand48 (unsigned short int __xsubi[3]) ; extern long int mrand48 (void) ; extern long int jrand48 (unsigned short int __xsubi[3]) ; extern void srand48 (long int __seedval) ; extern unsigned short int *seed48 (unsigned short int __seed16v[3]) ; extern void lcong48 (unsigned short int __param[7]) ; struct drand48_data { unsigned short int __x[3]; unsigned short int __old_x[3]; unsigned short int __c; unsigned short int __init; unsigned long long int __a; }; extern int drand48_r (struct drand48_data * __buffer, double * __result) ; extern int erand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, double * __result) ; extern int lrand48_r (struct drand48_data * __buffer, long int * __result) ; extern int nrand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, long int * __result) ; extern int mrand48_r (struct drand48_data * __buffer, long int * __result) ; extern int jrand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, long int * __result) ; extern int srand48_r (long int __seedval, struct drand48_data *__buffer) ; extern int seed48_r (unsigned short int __seed16v[3], struct drand48_data *__buffer) ; extern int lcong48_r (unsigned short int __param[7], struct drand48_data *__buffer) ; extern void *malloc (size_t __size) ; extern void *calloc (size_t __nmemb, size_t __size) ; extern void *realloc (void *__ptr, size_t __size) ; extern void free (void *__ptr) ; extern void cfree (void *__ptr) ; #line 1 "/usr/include/alloca.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/alloca.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 25 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 35 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 38 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 52 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 26 "/usr/include/alloca.h" extern "C" { extern void *alloca (size_t __size) ; } #line 498 "/usr/include/stdlib.h" extern void *valloc (size_t __size) ; extern int posix_memalign (void **__memptr, size_t __alignment, size_t __size) ; extern void abort (void) ; extern int atexit (void (*__func) (void)) ; extern int on_exit (void (*__func) (int __status, void *__arg), void *__arg) ; extern void exit (int __status) ; extern void _Exit (int __status) ; extern char *getenv (const char *__name) ; extern char *__secure_getenv (const char *__name) ; extern int putenv (char *__string) ; extern int setenv (const char *__name, const char *__value, int __replace) ; extern int unsetenv (const char *__name) ; extern int clearenv (void) ; extern char *mktemp (char *__template) ; extern int mkstemp (char *__template) ; #line 604 "/usr/include/stdlib.h" extern int mkstemp64 (char *__template) ; extern char *mkdtemp (char *__template) ; #line 638 "/usr/include/stdlib.h" extern int system (const char *__command) ; #line 655 "/usr/include/stdlib.h" extern char *realpath (const char * __name, char * __resolved) ; typedef int (*__compar_fn_t) (const void *, const void *); extern void *bsearch (const void *__key, const void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; extern void qsort (void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; extern int abs (int __x) ; extern long int labs (long int __x) ; extern long long int llabs (long long int __x) ; extern div_t div (int __numer, int __denom) ; extern ldiv_t ldiv (long int __numer, long int __denom) ; extern lldiv_t lldiv (long long int __numer, long long int __denom) ; extern char *ecvt (double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *fcvt (double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *gcvt (double __value, int __ndigit, char *__buf) ; extern char *qecvt (long double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *qfcvt (long double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *qgcvt (long double __value, int __ndigit, char *__buf) ; extern int ecvt_r (double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int fcvt_r (double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int qecvt_r (long double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int qfcvt_r (long double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int mblen (const char *__s, size_t __n) ; extern int mbtowc (wchar_t * __pwc, const char * __s, size_t __n) ; extern int wctomb (char *__s, wchar_t __wchar) ; extern size_t mbstowcs (wchar_t * __pwcs, const char * __s, size_t __n) ; extern size_t wcstombs (char * __s, const wchar_t * __pwcs, size_t __n) ; extern int rpmatch (const char *__response) ; extern int getsubopt (char ** __optionp, char *const * __tokens, char ** __valuep) ; extern void setkey (const char *__key) ; extern int posix_openpt (int __oflag) ; extern int grantpt (int __fd) ; extern int unlockpt (int __fd) ; extern char *ptsname (int __fd) ; #line 862 "/usr/include/stdlib.h" extern int getloadavg (double __loadavg[], int __nelem) ; #line 879 "/usr/include/stdlib.h" } #line 31 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/cstdlib" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/cstdlib" namespace std { using ::div_t; using ::ldiv_t; using ::size_t; using ::abs; using ::div; using ::abort; using ::getenv; using ::mblen; using ::mbtowc; using ::system; using ::bsearch; using ::atexit; using ::exit; using ::calloc; using ::free; using ::malloc; using ::realloc; using ::atof; using ::atoi; using ::atol; using ::mbstowcs; using ::strtod; using ::strtol; using ::strtoul; using ::wcstombs; using ::wctomb; using ::qsort; using ::labs; using ::ldiv; using ::llabs; using ::lldiv_t; using ::lldiv; #line 103 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/cstdlib" using ::rand; using ::srand; } #line 116 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/cstdlib" namespace std { inline long abs(long __x) { return ::labs(__x); } inline ldiv_t div(long __x, long __y) { return ::ldiv(__x, __y); } } #line 166 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/cstdlib" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_epilog.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config_compat_post.h" #line 27 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config_compat_post.h" #line 53 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config_compat_post.h" #line 20 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_epilog.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_epilog.h" #line 170 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/cstdlib" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Popping language Cxx ================================================================================ TEST checkFortranCompiler from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:919) TESTING: checkFortranCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:919) Locate a functional Fortran compiler Checking for program /opt/FJSVtclang/check/mpifrt...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/mpifrt...found Defined make macro "FC" to "mpifrt" Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.F Successful compile: Source: program main end Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.F Successful compile: Source: program main end Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.F Successful compile: Source: program main end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lpetsc-ufod4vtr9mqHvKIQiVAm Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.F Successful compile: Source: program main end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest Popping language FC ================================================================================ TEST checkFortranComments from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:940) TESTING: checkFortranComments from config.setCompilers(config/BuildSystem/config/setCompilers.py:940) Make sure fortran comment "!" works Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.F Successful compile: Source: ! comment program main end Fortran comments can use ! in column 1 Popping language FC ================================================================================ TEST checkPIC from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1003) TESTING: checkPIC from config.setCompilers(config/BuildSystem/config/setCompilers.py:1003) Determine the PIC option for each compiler - There needs to be a test that checks that the functionality is actually working Skip checking PIC options on user request ================================================================================ TEST checkLargeFileIO from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1036) TESTING: checkLargeFileIO from config.setCompilers(config/BuildSystem/config/setCompilers.py:1036) ================================================================================ TEST checkArchiver from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1135) TESTING: checkArchiver from config.setCompilers(config/BuildSystem/config/setCompilers.py:1135) Check that the archiver exists and can make a library usable by the compiler Pushing language C Executing: ar -V stdout: GNU ar 2.17 Copyright 2005 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License. This program has absolutely no warranty. Executing: ar -V stdout: GNU ar 2.17 Copyright 2005 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License. This program has absolutely no warranty. Defined make macro "FAST_AR_FLAGS" to "Scq" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int foo(int a) { return a+1; } Checking for program /opt/FJSVtclang/check/ar...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/ar...not found Checking for program /opt/kusu/bin/ar...not found Checking for program /opt/kusu/sbin/ar...not found Checking for program /usr/pgsql-9.0/bin/ar...not found Checking for program /usr/local/bin/ar...not found Checking for program /bin/ar...not found Checking for program /usr/bin/ar...found Defined make macro "AR" to "/usr/bin/ar" Checking for program /opt/FJSVtclang/check/ranlib...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/ranlib...not found Checking for program /opt/kusu/bin/ranlib...not found Checking for program /opt/kusu/sbin/ranlib...not found Checking for program /usr/pgsql-9.0/bin/ranlib...not found Checking for program /usr/local/bin/ranlib...not found Checking for program /bin/ranlib...not found Checking for program /usr/bin/ranlib...found Defined make macro "RANLIB" to "/usr/bin/ranlib -c" Executing: /usr/bin/ar cr /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/libconf1.a /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conf1.o Executing: /usr/bin/ranlib -c /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/libconf1.a Possible ERROR while running ranlib: stderr: /usr/bin/ranlib: '-c': No such file Ranlib is not functional with your archiver. Try --with-ranlib=true if ranlib is unnecessary. Executing: ar -V stdout: GNU ar 2.17 Copyright 2005 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License. This program has absolutely no warranty. Executing: ar -V stdout: GNU ar 2.17 Copyright 2005 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License. This program has absolutely no warranty. Defined make macro "FAST_AR_FLAGS" to "Scq" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int foo(int a) { return a+1; } Checking for program /opt/FJSVtclang/check/ar...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/ar...not found Checking for program /opt/kusu/bin/ar...not found Checking for program /opt/kusu/sbin/ar...not found Checking for program /usr/pgsql-9.0/bin/ar...not found Checking for program /usr/local/bin/ar...not found Checking for program /bin/ar...not found Checking for program /usr/bin/ar...found Defined make macro "AR" to "/usr/bin/ar" Checking for program /opt/FJSVtclang/check/ranlib...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/ranlib...not found Checking for program /opt/kusu/bin/ranlib...not found Checking for program /opt/kusu/sbin/ranlib...not found Checking for program /usr/pgsql-9.0/bin/ranlib...not found Checking for program /usr/local/bin/ranlib...not found Checking for program /bin/ranlib...not found Checking for program /usr/bin/ranlib...found Defined make macro "RANLIB" to "/usr/bin/ranlib" Executing: /usr/bin/ar cr /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/libconf1.a /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conf1.o Executing: /usr/bin/ranlib /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/libconf1.a Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" extern int foo(int); int main() { int b = foo(1); if (b); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -L/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -lconf1 Defined make macro "AR_FLAGS" to "cr" Defined make macro "AR_LIB_SUFFIX" to "a" Popping language C ================================================================================ TEST checkSharedLinker from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1246) TESTING: checkSharedLinker from config.setCompilers(config/BuildSystem/config/setCompilers.py:1246) Check that the linker can produce shared libraries Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Checking shared linker /usr/bin/ar using flags [] Checking for program /usr/bin/ar...found Defined make macro "LD_SHARED" to "/usr/bin/ar" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int foo(void) {printf("hello"); return 0;} Pushing language C Popping language C Executing: /usr/bin/ar cr /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/libconftest.a /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o ; /usr/bin/ranlib /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/libconftest.a Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int foo(void); int main() { int ret = foo(); if(ret);; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -L/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -lconftest Using shared linker /usr/bin/ar with flags [] and library extension a Executing: uname -s stdout: Linux ================================================================================ TEST checkSharedLinkerPaths from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1324) TESTING: checkSharedLinkerPaths from config.setCompilers(config/BuildSystem/config/setCompilers.py:1324) Determine the shared linker path options - IRIX: -rpath - Linux, OSF: -Wl,-rpath, - Solaris: -R - FreeBSD: -Wl,-R, Pushing language C Executing: uname -s stdout: Linux Executing: mpifcc -V Trying C linker flag -Wl,-rpath, Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -Wl,-rpath,/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o Valid C linker flag -Wl,-rpath,/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 Popping language C Pushing language Cxx Executing: uname -s stdout: Linux Executing: mpifcc -V Trying Cxx linker flag -Wl,-rpath, Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -Wl,-rpath,/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o Valid Cxx linker flag -Wl,-rpath,/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 Popping language Cxx Pushing language FC Executing: uname -s stdout: Linux Executing: mpifcc -V Trying FC linker flag -Wl,-rpath, Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.F Successful compile: Source: program main end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -Wl,-rpath,/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o Valid FC linker flag -Wl,-rpath,/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 Popping language FC ================================================================================ TEST checkLibC from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1359) TESTING: checkLibC from config.setCompilers(config/BuildSystem/config/setCompilers.py:1359) Test whether we need to explicitly include libc in shared linking - Mac OSX requires an explicit reference to libc for shared linking ================================================================================ TEST checkDynamicLinker from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1408) TESTING: checkDynamicLinker from config.setCompilers(config/BuildSystem/config/setCompilers.py:1408) Check that the linker can dynamicaly load shared libraries Checking for header: dlfcn.h All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/dlfcn.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/dlfcn.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 27 "/usr/include/dlfcn.h" #line 1 "/usr/include/bits/dlfcn.h" #line 30 "/usr/include/dlfcn.h" #line 52 "/usr/include/dlfcn.h" extern void *dlopen (const char *__file, int __mode) ; extern int dlclose (void *__handle) ; extern void *dlsym (void * __handle, const char * __name) ; #line 80 "/usr/include/dlfcn.h" extern char *dlerror (void) ; #line 188 "/usr/include/dlfcn.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_DLFCN_H" to "1" Checking for functions [dlopen dlsym dlclose] in library ['dl'] [] Pushing language C All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dlopen(); static void _check_dlopen() { dlopen(); } char dlsym(); static void _check_dlsym() { dlsym(); } char dlclose(); static void _check_dlclose() { dlclose(); } int main() { _check_dlopen(); _check_dlsym(); _check_dlclose();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ldl Defined "HAVE_LIBDL" to "1" Popping language C Adding ['dl'] to LIBS Executing: uname -s stdout: Linux Checking dynamic linker /usr/bin/ar using flags [] Checking for program /usr/bin/ar...found Defined make macro "DYNAMICLINKER" to "/usr/bin/ar" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int foo(void) {printf("test");return 0;} Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Pushing language C Popping language C Executing: /usr/bin/ar -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/libconftest.so /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ar: no operation specified Checking dynamic linker mpifcc using flags ['-shared'] Checking for program /opt/FJSVtclang/check/mpifcc...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/mpifcc...found Defined make macro "DYNAMICLINKER" to "mpifcc" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -shared -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -ldl Valid C linker flag -shared Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int foo(void) {printf("test");return 0;} Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/libconftest.so -shared -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { void *handle = dlopen("/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/libconftest.so", 0); int (*foo)(void) = (int (*)(void)) dlsym(handle, "foo"); if (!foo) { printf("Could not load symbol\n"); return -1; } if ((*foo)()) { printf("Invalid return from foo()\n"); return -1; } if (dlclose(handle)) { printf("Could not close library\n"); return -1; } ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -ldl Using dynamic linker mpifcc with flags ['-shared'] and library extension so ================================================================================ TEST output from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1454) TESTING: output from config.setCompilers(config/BuildSystem/config/setCompilers.py:1454) Output module data as defines and substitutions Substituting "CC" with "mpifcc" Substituting "CFLAGS" with "-Xg -O0" Defined make macro "CC_LINKER_SLFLAG" to "-Wl,-rpath," Substituting "CPP" with "mpifcc -E" Substituting "CPPFLAGS" with "" Substituting "CXX" with "mpiFCC" Substituting "CXX_CXXFLAGS" with "" Substituting "CXXFLAGS" with "-Xg -O0" Substituting "CXX_LINKER_SLFLAG" with "-Wl,-rpath," Substituting "CXXCPP" with "mpiFCC -E" Substituting "CXXCPPFLAGS" with "" Substituting "FC" with "mpifrt" Substituting "FFLAGS" with "-X9 -O0" Defined make macro "FC_LINKER_SLFLAG" to "-Wl,-rpath," Substituting "LDFLAGS" with "" Substituting "LIBS" with "-ldl " Substituting "SHARED_LIBRARY_FLAG" with "" Executing: uname -s stdout: Linux ================================================================================ TEST checkSharedDynamicPicOptions from PETSc.options.sharedLibraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/sharedLibraries.py:37) TESTING: checkSharedDynamicPicOptions from PETSc.options.sharedLibraries(config/PETSc/options/sharedLibraries.py:37) ================================================================================ TEST configureSharedLibraries from PETSc.options.sharedLibraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/sharedLibraries.py:53) TESTING: configureSharedLibraries from PETSc.options.sharedLibraries(config/PETSc/options/sharedLibraries.py:53) Checks whether shared libraries should be used, for which you must - Specify --with-shared-libraries - Have found a working shared linker Defines PETSC_USE_SHARED_LIBRARIES if they are used Defined make rule "shared_arch" with dependencies "" and code [] Defined make macro "BUILDSHAREDLIB" to "no" Defined "HAVE_SHARED_LIBRARIES" to "1" Shared libraries - disabled ================================================================================ TEST configureDynamicLibraries from PETSc.options.sharedLibraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/sharedLibraries.py:96) TESTING: configureDynamicLibraries from PETSc.options.sharedLibraries(config/PETSc/options/sharedLibraries.py:96) Checks whether dynamic loading is available (with dlfcn.h and libdl) Defined "HAVE_DYNAMIC_LIBRARIES" to "1" ================================================================================ TEST configureSerializedFunctions from PETSc.options.sharedLibraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/sharedLibraries.py:102) TESTING: configureSerializedFunctions from PETSc.options.sharedLibraries(config/PETSc/options/sharedLibraries.py:102) Defines PETSC_SERIALIZE_FUNCTIONS if they are used Requires shared libraries ================================================================================ TEST configureIndexSize from PETSc.options.indexTypes(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/indexTypes.py:31) TESTING: configureIndexSize from PETSc.options.indexTypes(config/PETSc/options/indexTypes.py:31) Defined make macro "PETSC_INDEX_SIZE" to "32" ================================================================================ TEST configureCompilerFlags from config.compilerFlags(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilerFlags.py:71) TESTING: configureCompilerFlags from config.compilerFlags(config/BuildSystem/config/compilerFlags.py:71) Get the default compiler flags Pushing language C Executing: mpifcc --version Ignoring default options which were overridden using --CFLAGS -Xg -O0 Optimization options found in CFLAGS. Skipping setting defaults Popping language C Pushing language Cxx Executing: mpiFCC --version Ignoring default options which were overridden using --CXXFLAGS -Xg -O0 Optimization options found in CXXFLAGS. Skipping setting defaults Popping language Cxx Pushing language FC Executing: mpifrt --version Ignoring default options which were overridden using --FFLAGS -X9 -O0 Optimization options found in FFLAGS. Skipping setting defaults Popping language FC ================================================================================ TEST configureDebugging from PETSc.options.debugging(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/debugging.py:25) TESTING: configureDebugging from PETSc.options.debugging(config/PETSc/options/debugging.py:25) Defined "USE_ERRORCHECKING" to "1" Executing: mpifcc --help ================================================================================ TEST checkRestrict from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:137) TESTING: checkRestrict from config.compilers(config/BuildSystem/config/compilers.py:137) Check for the C/CXX restrict keyword Pushing language C All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.c Possible ERROR while running compiler: exit code 512 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.c", line 5: error: expected a ";" float * restrict x;; ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.c", line 5: warning: variable "restrict" was declared but never referenced float * restrict x;; ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" int main() { float * restrict x;; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.c", line 5: warning: variable "x" was declared but never referenced float * __restrict__ x;; ^ Source: #include "confdefs.h" #include "conffix.h" int main() { float * __restrict__ x;; return 0; } compilers: Set C restrict keyword to __restrict__ Defined "C_RESTRICT" to " __restrict__" Popping language C ================================================================================ TEST checkCFormatting from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:310) TESTING: checkCFormatting from config.compilers(config/BuildSystem/config/compilers.py:310) Activate format string checking if using the GNU compilers ================================================================================ TEST checkCStaticInline from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:108) TESTING: checkCStaticInline from config.compilers(config/BuildSystem/config/compilers.py:108) Check for C keyword: static inline Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" static inline int foo(int a) {return a;} int main() { foo(1);; return 0; } compilers: Set C StaticInline keyword to static inline Popping language C Defined "C_STATIC_INLINE" to "static inline" ================================================================================ TEST checkDynamicLoadFlag from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:321) TESTING: checkDynamicLoadFlag from config.compilers(config/BuildSystem/config/compilers.py:321) Checks that dlopen() takes RTLD_XXX, and defines PETSC_HAVE_RTLD_XXX if it does Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include char *libname; int main() { dlopen(libname, RTLD_LAZY); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -ldl Defined "HAVE_RTLD_LAZY" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include char *libname; int main() { dlopen(libname, RTLD_NOW); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -ldl Defined "HAVE_RTLD_NOW" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include char *libname; int main() { dlopen(libname, RTLD_LOCAL); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -ldl Defined "HAVE_RTLD_LOCAL" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include char *libname; int main() { dlopen(libname, RTLD_GLOBAL); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -ldl Defined "HAVE_RTLD_GLOBAL" to "1" ================================================================================ TEST checkCLibraries from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:164) TESTING: checkCLibraries from config.compilers(config/BuildSystem/config/compilers.py:164) Determines the libraries needed to link with C Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest -### -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -ldl stdout: /usr/bin/ld --eh-frame-hdr -m elf64_sparc -YP,/usr/lib64 -dynamic-linker /lib64/ld-linux.so.2 /usr/lib64/crt1.o /usr/lib64/crti.o /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtbegin.o -YP,/usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4 -u__metInit -ltrtmet -ltrtmet_c -Qy -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lm -lnsl -lutil //opt/FJSVtclang/GM-1.2.0-20/bin/../lib64/fjrtprof.o -T//opt/FJSVtclang/GM-1.2.0-20/bin/../util/lib/data-256mb.lds -L//opt/FJSVtclang/GM-1.2.0-20/bin/../lib64 -u_xfdb_Init -ltrtfdb -lfjrtcl -ltrtth -L/usr/lib64 -lmpg -lmpgpthread -lpapi -lrt -lelf -ldl -lgcc_s -lgcc -lc -lgcc_s -lgcc -lc /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtend.o -L/opt/FJSVxosmmm/lib64 /usr/lib64/crtn.o //opt/FJSVtclang/GM-1.2.0-20/bin/../lib/aopt2 -ir-strip /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest Popping language C compilers: Checking arg /usr/bin/ld compilers: Unknown arg /usr/bin/ld compilers: Checking arg --eh-frame-hdr compilers: Unknown arg --eh-frame-hdr compilers: Checking arg -m compilers: Unknown arg -m compilers: Checking arg elf64_sparc compilers: Unknown arg elf64_sparc compilers: Checking arg -YP,/usr/lib64 compilers: Unknown arg -YP,/usr/lib64 compilers: Checking arg -dynamic-linker compilers: Unknown arg -dynamic-linker compilers: Checking arg /lib64/ld-linux.so.2 compilers: Unknown arg /lib64/ld-linux.so.2 compilers: Checking arg /usr/lib64/crt1.o compilers: Unknown arg /usr/lib64/crt1.o compilers: Checking arg /usr/lib64/crti.o compilers: Unknown arg /usr/lib64/crti.o compilers: Checking arg /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtbegin.o compilers: Unknown arg /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtbegin.o compilers: Checking arg -YP,/usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4 compilers: Unknown arg -YP,/usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4 compilers: Checking arg -u__metInit compilers: Unknown arg -u__metInit compilers: Checking arg -ltrtmet compilers: Found library : -ltrtmet compilers: Checking arg -ltrtmet_c compilers: Found library : -ltrtmet_c compilers: Checking arg -Qy compilers: Unknown arg -Qy compilers: Checking arg -o compilers: Unknown arg -o compilers: Checking arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest compilers: Unknown arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest compilers: Checking arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o compilers: Unknown arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o compilers: Checking arg -ldl compilers: Found library : -ldl compilers: Checking arg -L/opt/FJSVpxtof/sparc64fx/lib64 compilers: Found library directory: -L/opt/FJSVpxtof/sparc64fx/lib64 compilers: Checking arg -L/opt/FJSVtclang/GM-1.2.0-20/lib64 compilers: Found library directory: -L/opt/FJSVtclang/GM-1.2.0-20/lib64 compilers: Checking arg -lmpi compilers: Found library : -lmpi compilers: Checking arg -ltofucom compilers: Found library : -ltofucom compilers: Checking arg -ltofutop compilers: Found library : -ltofutop compilers: Checking arg -lm compilers: Checking arg -lnsl compilers: Found library : -lnsl compilers: Checking arg -lutil compilers: Found library : -lutil compilers: Checking arg //opt/FJSVtclang/GM-1.2.0-20/bin/../lib64/fjrtprof.o compilers: Unknown arg //opt/FJSVtclang/GM-1.2.0-20/bin/../lib64/fjrtprof.o compilers: Checking arg -T//opt/FJSVtclang/GM-1.2.0-20/bin/../util/lib/data-256mb.lds compilers: Unknown arg -T//opt/FJSVtclang/GM-1.2.0-20/bin/../util/lib/data-256mb.lds compilers: Checking arg -L//opt/FJSVtclang/GM-1.2.0-20/bin/../lib64 compilers: Found library directory: -L//opt/FJSVtclang/GM-1.2.0-20/lib64 compilers: Checking arg -u_xfdb_Init compilers: Unknown arg -u_xfdb_Init compilers: Checking arg -ltrtfdb compilers: Found library : -ltrtfdb compilers: Checking arg -lfjrtcl compilers: Found library : -lfjrtcl compilers: Checking arg -ltrtth compilers: Found library : -ltrtth compilers: Checking arg -L/usr/lib64 compilers: Checking arg -lmpg compilers: Found library : -lmpg compilers: Checking arg -lmpgpthread compilers: Found library : -lmpgpthread compilers: Checking arg -lpapi compilers: Found library : -lpapi compilers: Checking arg -lrt compilers: Found library : -lrt compilers: Checking arg -lelf compilers: Found library : -lelf compilers: Checking arg -ldl compilers: Checking arg -lgcc_s compilers: Found library : -lgcc_s compilers: Checking arg -lgcc compilers: Skipping system library: -lgcc compilers: Checking arg -lc compilers: Skipping system library: -lc compilers: Checking arg -lgcc_s compilers: Checking arg -lgcc compilers: Skipping system library: -lgcc compilers: Checking arg -lc compilers: Skipping system library: -lc compilers: Checking arg /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtend.o compilers: Unknown arg /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtend.o compilers: Checking arg -L/opt/FJSVxosmmm/lib64 compilers: Found library directory: -L/opt/FJSVxosmmm/lib64 compilers: Checking arg /usr/lib64/crtn.o compilers: Unknown arg /usr/lib64/crtn.o compilers: Checking arg //opt/FJSVtclang/GM-1.2.0-20/bin/../lib/aopt2 compilers: Unknown arg //opt/FJSVtclang/GM-1.2.0-20/bin/../lib/aopt2 compilers: Checking arg -ir-strip compilers: Unknown arg -ir-strip compilers: Checking arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest compilers: Unknown arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest compilers: Libraries needed to link C code with another linker: ['-ltrtmet', '-ltrtmet_c', '-ldl', '-L/opt/FJSVpxtof/sparc64fx/lib64', '-L/opt/FJSVtclang/GM-1.2.0-20/lib64', '-lmpi', '-ltofucom', '-ltofutop', '-lnsl', '-lutil', '-L//opt/FJSVtclang/GM-1.2.0-20/lib64', '-ltrtfdb', '-lfjrtcl', '-ltrtth', '-lmpg', '-lmpgpthread', '-lpapi', '-lrt', '-lelf', '-lgcc_s', '-L/opt/FJSVxosmmm/lib64'] compilers: Check that C libraries can be used from Fortran Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.F Successful compile: Source: program main end Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.F Successful compile: Source: program main end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.F Successful compile: Source: program main end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lpetsc-ufod4vtr9mqHvKIQiVAm Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.F Successful compile: Source: program main end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest Popping language FC ================================================================================ TEST checkDependencyGenerationFlag from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:1328) TESTING: checkDependencyGenerationFlag from config.compilers(config/BuildSystem/config/compilers.py:1328) Check if -MMD works for dependency generation, and add it if it does Pushing language C Trying C compiler flag -MMD -MP Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 -MMD -MP /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejected C compiler flag -MMD -MP because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.d) was generated Trying C compiler flag -MMD Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 -MMD /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejected C compiler flag -MMD because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.d) was generated Trying C compiler flag -xMMD Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 -xMMD /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejected C compiler flag -xMMD because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.d) was generated Trying C compiler flag -qmakedep=gcc Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 -qmakedep=gcc /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Possible ERROR while running compiler: stderr: fcc: warning: -qmakedep=gcc is unrecognized option. This option is passed to the linker. Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -qmakedep=gcc due to fcc: warning: -qmakedep=gcc is unrecognized option. This option is passed to the linker. Rejected C compiler flag -qmakedep=gcc Trying C compiler flag -MD Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 -MD /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejected C compiler flag -MD because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.d) was generated Popping language C Pushing language Cxx Trying Cxx compiler flag -MMD -MP Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 -MMD -MP /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejected Cxx compiler flag -MMD -MP because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.d) was generated Trying Cxx compiler flag -MMD Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 -MMD /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejected Cxx compiler flag -MMD because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.d) was generated Trying Cxx compiler flag -xMMD Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 -xMMD /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejected Cxx compiler flag -xMMD because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.d) was generated Trying Cxx compiler flag -qmakedep=gcc Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 -qmakedep=gcc /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc Possible ERROR while running compiler: stderr: FCC: warning: -qmakedep=gcc is unrecognized option. This option is passed to the linker. Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -qmakedep=gcc due to FCC: warning: -qmakedep=gcc is unrecognized option. This option is passed to the linker. Rejected Cxx compiler flag -qmakedep=gcc Trying Cxx compiler flag -MD Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -Xg -O0 -MD /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejected Cxx compiler flag -MD because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.d) was generated Popping language Cxx Pushing language FC Trying FC compiler flag -MMD -MP Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -X9 -O0 -MMD -MP /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.F Successful compile: Source: program main end Rejected FC compiler flag -MMD -MP because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.d) was generated Trying FC compiler flag -MMD Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -X9 -O0 -MMD /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.F Successful compile: Source: program main end Rejected FC compiler flag -MMD because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.d) was generated Trying FC compiler flag -xMMD Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -X9 -O0 -xMMD /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.F Successful compile: Source: program main end Rejected FC compiler flag -xMMD because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.d) was generated Trying FC compiler flag -qmakedep=gcc Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -X9 -O0 -qmakedep=gcc /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.F Possible ERROR while running compiler: stderr: frt: warning: -qmakedep=gcc cannot be specified. Source: program main end Rejected FC compiler flag -qmakedep=gcc because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.d) was generated Trying FC compiler flag -MD Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -X9 -O0 -MD /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.F Successful compile: Source: program main end Rejected FC compiler flag -MD because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.d) was generated Popping language FC ================================================================================ TEST checkC99Flag from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:1372) TESTING: checkC99Flag from config.compilers(config/BuildSystem/config/compilers.py:1372) Check for -std=c99 or equivalent flag Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Possible ERROR while running compiler: exit code 512 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c", line 10: error: expected an expression for (int i=0; i<2; i++){ ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c", line 10: error: identifier "i" is undefined for (int i=0; i<2; i++){ ^ 2 errors detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" int main() { int x[2],y; y = 5; // c++ comment int j = 2; for (int i=0; i<2; i++){ x[i] = i*j*y; } ; return 0; } Rejecting compiler flag due to nonzero status from link Rejecting compiler flag due to "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c", line 10: error: expected an expression for (int i=0; i<2; i++){ ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c", line 10: error: identifier "i" is undefined for (int i=0; i<2; i++){ ^ 2 errors detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c". PETSc Error: No output file produced Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 -std=c99 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c", line 6: warning: variable "x" was set but never used int x[2],y; ^ Source: #include "confdefs.h" #include "conffix.h" int main() { int x[2],y; y = 5; // c++ comment int j = 2; for (int i=0; i<2; i++){ x[i] = i*j*y; } ; return 0; } Accepted C99 compile flag: -std=c99 Popping language C Executing: mpiFCC --help ================================================================================ TEST checkRestrict from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:137) TESTING: checkRestrict from config.compilers(config/BuildSystem/config/compilers.py:137) Check for the C/CXX restrict keyword Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.cc Possible ERROR while running compiler: exit code 512 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.cc", line 5: error: expected a ";" float * restrict x;; ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.cc", line 5: warning: variable "restrict" was declared but never referenced float * restrict x;; ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.cc". Source: #include "confdefs.h" #include "conffix.h" int main() { float * restrict x;; return 0; } Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.cc Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.cc", line 5: warning: variable "x" was declared but never referenced float * __restrict__ x;; ^ Source: #include "confdefs.h" #include "conffix.h" int main() { float * __restrict__ x;; return 0; } compilers: Set Cxx restrict keyword to __restrict__ Defined "CXX_RESTRICT" to " __restrict__" Popping language Cxx ================================================================================ TEST checkCxxNamespace from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:359) TESTING: checkCxxNamespace from config.compilers(config/BuildSystem/config/compilers.py:359) Checks that C++ compiler supports namespaces, and if it does defines HAVE_CXX_NAMESPACE Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" namespace petsc {int dummy;} int main() { ; return 0; } Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" template struct a {}; namespace trouble{ template struct a : public ::a {}; } trouble::a uugh; int main() { ; return 0; } Popping language Cxx compilers: C++ has namespaces Defined "HAVE_CXX_NAMESPACE" to "1" ================================================================================ TEST checkCxxOptionalExtensions from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:334) TESTING: checkCxxOptionalExtensions from config.compilers(config/BuildSystem/config/compilers.py:334) Check whether the C++ compiler (IBM xlC, OSF5) need special flag for .c files which contain C++ Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { class somename { int i; };; return 0; } Added Cxx compiler flag Popping language Cxx ================================================================================ TEST checkCxxStaticInline from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:122) TESTING: checkCxxStaticInline from config.compilers(config/BuildSystem/config/compilers.py:122) Check for C++ keyword: static inline Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" static inline int foo(int a) {return a;} int main() { foo(1);; return 0; } compilers: Set Cxx StaticInline keyword to static inline Popping language Cxx Defined "CXX_STATIC_INLINE" to "static inline" ================================================================================ TEST checkCxxLibraries from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:413) TESTING: checkCxxLibraries from config.compilers(config/BuildSystem/config/compilers.py:413) Determines the libraries needed to link with C++ Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest -### -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl stdout: /usr/bin/ld --eh-frame-hdr -m elf64_sparc -YP,/usr/lib64 -dynamic-linker /lib64/ld-linux.so.2 /usr/lib64/crt1.o /usr/lib64/crti.o /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtbegin.o -YP,/usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4 -u__metInit -ltrtmetcpp -ltrtmet_c -Qy -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi_cxx -lmpi -ltofucom -ltofutop -lm -lnsl -lutil //opt/FJSVtclang/GM-1.2.0-20/bin/../lib64/fjrtprof.o -T//opt/FJSVtclang/GM-1.2.0-20/bin/../util/lib/data-256mb.lds -L//opt/FJSVtclang/GM-1.2.0-20/bin/../lib64 -lfjdemgl -u_xfdb_Init -ltrtfdb -lfjrtcl -ltrtth -L/usr/lib64 -lstd_mt -lmpg -lmpgpthread -lpthread -lpapi -lm -lrt -lelf -ldl -lstdc++ -lgcc_s -lgcc -lc -lgcc_s -lgcc -lc /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtend.o -L/opt/FJSVxosmmm/lib64 /usr/lib64/crtn.o //opt/FJSVtclang/GM-1.2.0-20/bin/../lib/aopt2 -ir-strip /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest Popping language Cxx compilers: Checking arg /usr/bin/ld compilers: Unknown arg /usr/bin/ld compilers: Checking arg --eh-frame-hdr compilers: Unknown arg --eh-frame-hdr compilers: Checking arg -m compilers: Unknown arg -m compilers: Checking arg elf64_sparc compilers: Unknown arg elf64_sparc compilers: Checking arg -YP,/usr/lib64 compilers: Unknown arg -YP,/usr/lib64 compilers: Checking arg -dynamic-linker compilers: Unknown arg -dynamic-linker compilers: Checking arg /lib64/ld-linux.so.2 compilers: Unknown arg /lib64/ld-linux.so.2 compilers: Checking arg /usr/lib64/crt1.o compilers: Unknown arg /usr/lib64/crt1.o compilers: Checking arg /usr/lib64/crti.o compilers: Unknown arg /usr/lib64/crti.o compilers: Checking arg /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtbegin.o compilers: Unknown arg /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtbegin.o compilers: Checking arg -YP,/usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4 compilers: Unknown arg -YP,/usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4 compilers: Checking arg -u__metInit compilers: Unknown arg -u__metInit compilers: Checking arg -ltrtmetcpp compilers: Found library: -ltrtmetcpp compilers: Checking arg -ltrtmet_c compilers: Found library: -ltrtmet_c Library already in C list so skipping in C++ compilers: Checking arg -Qy compilers: Unknown arg -Qy compilers: Checking arg -o compilers: Unknown arg -o compilers: Checking arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest compilers: Unknown arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest compilers: Checking arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o compilers: Unknown arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o compilers: Checking arg -ltrtmet compilers: Found library: -ltrtmet Library already in C list so skipping in C++ compilers: Checking arg -ltrtmet_c compilers: Checking arg -ldl compilers: Found library: -ldl Library already in C list so skipping in C++ compilers: Checking arg -L/opt/FJSVpxtof/sparc64fx/lib64 compilers: Found library directory: -L/opt/FJSVpxtof/sparc64fx/lib64 compilers: Checking arg -L/opt/FJSVtclang/GM-1.2.0-20/lib64 compilers: Found library directory: -L/opt/FJSVtclang/GM-1.2.0-20/lib64 compilers: Checking arg -lmpi compilers: Found library: -lmpi Library already in C list so skipping in C++ compilers: Checking arg -ltofucom compilers: Found library: -ltofucom Library already in C list so skipping in C++ compilers: Checking arg -ltofutop compilers: Found library: -ltofutop Library already in C list so skipping in C++ compilers: Checking arg -lnsl compilers: Found library: -lnsl Library already in C list so skipping in C++ compilers: Checking arg -lutil compilers: Found library: -lutil Library already in C list so skipping in C++ compilers: Checking arg -L//opt/FJSVtclang/GM-1.2.0-20/lib64 compilers: Found library directory: -L//opt/FJSVtclang/GM-1.2.0-20/lib64 compilers: Checking arg -ltrtfdb compilers: Found library: -ltrtfdb Library already in C list so skipping in C++ compilers: Checking arg -lfjrtcl compilers: Found library: -lfjrtcl Library already in C list so skipping in C++ compilers: Checking arg -ltrtth compilers: Found library: -ltrtth Library already in C list so skipping in C++ compilers: Checking arg -lmpg compilers: Found library: -lmpg Library already in C list so skipping in C++ compilers: Checking arg -lmpgpthread compilers: Found library: -lmpgpthread Library already in C list so skipping in C++ compilers: Checking arg -lpapi compilers: Found library: -lpapi Library already in C list so skipping in C++ compilers: Checking arg -lrt compilers: Found library: -lrt Library already in C list so skipping in C++ compilers: Checking arg -lelf compilers: Found library: -lelf Library already in C list so skipping in C++ compilers: Checking arg -lgcc_s compilers: Found library: -lgcc_s Library already in C list so skipping in C++ compilers: Checking arg -L/opt/FJSVxosmmm/lib64 compilers: Found library directory: -L/opt/FJSVxosmmm/lib64 compilers: Checking arg -ldl compilers: Checking arg -L/opt/FJSVpxtof/sparc64fx/lib64 compilers: Checking arg -L/opt/FJSVtclang/GM-1.2.0-20/lib64 compilers: Checking arg -lmpi_cxx compilers: Found library: -lmpi_cxx compilers: Checking arg -lmpi compilers: Checking arg -ltofucom compilers: Checking arg -ltofutop compilers: Checking arg -lm compilers: Checking arg -lnsl compilers: Checking arg -lutil compilers: Checking arg //opt/FJSVtclang/GM-1.2.0-20/bin/../lib64/fjrtprof.o compilers: Unknown arg //opt/FJSVtclang/GM-1.2.0-20/bin/../lib64/fjrtprof.o compilers: Checking arg -T//opt/FJSVtclang/GM-1.2.0-20/bin/../util/lib/data-256mb.lds compilers: Unknown arg -T//opt/FJSVtclang/GM-1.2.0-20/bin/../util/lib/data-256mb.lds compilers: Checking arg -L//opt/FJSVtclang/GM-1.2.0-20/bin/../lib64 compilers: Checking arg -lfjdemgl compilers: Found library: -lfjdemgl compilers: Checking arg -u_xfdb_Init compilers: Unknown arg -u_xfdb_Init compilers: Checking arg -ltrtfdb compilers: Checking arg -lfjrtcl compilers: Checking arg -ltrtth compilers: Checking arg -L/usr/lib64 compilers: Checking arg -lstd_mt compilers: Found library: -lstd_mt compilers: Checking arg -lmpg compilers: Checking arg -lmpgpthread compilers: Checking arg -lpthread compilers: Found library: -lpthread compilers: Checking arg -lpapi compilers: Checking arg -lm compilers: Checking arg -lrt compilers: Checking arg -lelf compilers: Checking arg -ldl compilers: Checking arg -lstdc++ compilers: Found library: -lstdc++ compilers: Checking arg -lgcc_s compilers: Checking arg -lgcc compilers: Skipping system library: -lgcc compilers: Checking arg -lc compilers: Skipping system library: -lc compilers: Checking arg -lgcc_s compilers: Checking arg -lgcc compilers: Skipping system library: -lgcc compilers: Checking arg -lc compilers: Skipping system library: -lc compilers: Checking arg /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtend.o compilers: Unknown arg /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtend.o compilers: Checking arg -L/opt/FJSVxosmmm/lib64 compilers: Checking arg /usr/lib64/crtn.o compilers: Unknown arg /usr/lib64/crtn.o compilers: Checking arg //opt/FJSVtclang/GM-1.2.0-20/bin/../lib/aopt2 compilers: Unknown arg //opt/FJSVtclang/GM-1.2.0-20/bin/../lib/aopt2 compilers: Checking arg -ir-strip compilers: Unknown arg -ir-strip compilers: Checking arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest compilers: Unknown arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest compilers: Libraries needed to link Cxx code with another linker: ['-ltrtmetcpp', '-L/opt/FJSVpxtof/sparc64fx/lib64', '-L/opt/FJSVtclang/GM-1.2.0-20/lib64', '-L//opt/FJSVtclang/GM-1.2.0-20/lib64', '-L/opt/FJSVxosmmm/lib64', '-lmpi_cxx', '-lfjdemgl', '-lstd_mt', '-lpthread', '-lstdc++'] compilers: Check that Cxx libraries can be used from C Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lpetsc-ufod4vtr9mqHvKIQiVAm Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest Popping language C compilers: Check that Cxx libraries can be used from Fortran Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.F Successful compile: Source: program main end Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.F Successful compile: Source: program main end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.F Successful compile: Source: program main end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lpetsc-ufod4vtr9mqHvKIQiVAm Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.F Successful compile: Source: program main end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest Popping language FC ================================================================================ TEST checkCxx11 from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:374) TESTING: checkCxx11 from config.compilers(config/BuildSystem/config/compilers.py:374) Determine the option needed to support the C++11 dialect We auto-detect C++11 if the compiler supports it without options, otherwise we require with-cxx-dialect=C++11 to try adding flags to support it. Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc", line 4: catastrophic error: cannot open source file "random" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" #include template constexpr T Cubed( T x ) { return x*x*x; } int main() { std::random_device rd; std::mt19937 mt(rd()); std::normal_distribution dist(0,1); const double x = dist(mt); ; return 0; } Rejecting compiler flag due to nonzero status from link Rejecting compiler flag due to "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc", line 4: catastrophic error: cannot open source file "random" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc". Compilation terminated. PETSc Error: No output file produced Popping language Cxx ================================================================================ TEST checkFortranTypeSizes from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:572) TESTING: checkFortranTypeSizes from config.compilers(config/BuildSystem/config/compilers.py:572) Check whether real*8 is supported and suggest flags which will allow support Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.F Possible ERROR while running compiler: stderr: Fortran diagnostic messages: program name(main) jwd2006i-i "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.F", line 2: 'variable' is declared but never referenced. Source: program main real*8 variable end Popping language FC ================================================================================ TEST checkFortranNameMangling from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:631) TESTING: checkFortranNameMangling from config.compilers(config/BuildSystem/config/compilers.py:631) Checks Fortran name mangling, and defines HAVE_FORTRAN_UNDERSCORE, HAVE_FORTRAN_NOUNDERSCORE, HAVE_FORTRAN_CAPS, or HAVE_FORTRAN_STDCALL Testing Fortran mangling type underscore with code void d1chk_(void){return;} Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" void d1chk_(void){return;} Popping language C Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.F Successful compile: Source: program main call d1chk() end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/confc.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language FC compilers: Fortran name mangling is underscore Defined "HAVE_FORTRAN_UNDERSCORE" to "1" ================================================================================ TEST checkFortranNameManglingDouble from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:668) TESTING: checkFortranNameManglingDouble from config.compilers(config/BuildSystem/config/compilers.py:668) Checks if symbols containing an underscore append an extra underscore, and defines HAVE_FORTRAN_UNDERSCORE_UNDERSCORE if necessary Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" void d1_chk__(void){return;} Popping language C Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.F Successful compile: Source: program main call d1_chk() end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/confc.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o: In function `MAIN__': conftest.F:(.text+0x30): undefined reference to `d1_chk_' /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o:(.data+0x0): undefined reference to `d1_chk_' Popping language FC ================================================================================ TEST checkFortranPreprocessor from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:678) TESTING: checkFortranPreprocessor from config.compilers(config/BuildSystem/config/compilers.py:678) Determine if Fortran handles preprocessing properly Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.F Successful compile: Source: program main #define dummy dummy #ifndef dummy fooey #endif end Added FC compiler flag Popping language FC compilers: Fortran uses CPP preprocessor ================================================================================ TEST checkFortranDefineCompilerOption from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:699) TESTING: checkFortranDefineCompilerOption from config.compilers(config/BuildSystem/config/compilers.py:699) Check if -WF,-Dfoobar or -Dfoobar is the compiler option to define a macro Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -X9 -O0 -DTesting /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.F Successful compile: Source: program main #define dummy dummy #ifndef Testing fooey #endif end Defined make macro "FC_DEFINE_FLAG" to "-D" Popping language FC compilers: Fortran uses -D for defining macro ================================================================================ TEST checkFortranLibraries from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:716) TESTING: checkFortranLibraries from config.compilers(config/BuildSystem/config/compilers.py:716) Substitutes for FLIBS the libraries needed to link with Fortran This macro is intended to be used in those situations when it is necessary to mix, e.g. C++ and Fortran 77, source code into a single program or shared library. For example, if object files from a C++ and Fortran 77 compiler must be linked together, then the C++ compiler/linker must be used for linking (since special C++-ish things need to happen at link time like calling global constructors, instantiating templates, enabling exception support, etc.). However, the Fortran 77 intrinsic and run-time libraries must be linked in as well, but the C++ compiler/linker does not know how to add these Fortran 77 libraries. This code was translated from the autoconf macro which was packaged in its current form by Matthew D. Langston . However, nearly all of this macro came from the OCTAVE_FLIBS macro in octave-2.0.13/aclocal.m4, and full credit should go to John W. Eaton for writing this extremely useful macro. Pushing language FC Executing: mpifrt -V Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.F Successful compile: Source: program main end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest -v -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language FC compilers: Libraries needed to link Fortran code with the C linker: [] compilers: Libraries needed to link Fortran main with the C linker: [] compilers: Check that Fortran libraries can be used from C Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lpetsc-ufod4vtr9mqHvKIQiVAm Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest Popping language C compilers: Check that Fortran libraries can be used from C++ Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lpetsc-ufod4vtr9mqHvKIQiVAm Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest Popping language Cxx compilers: Fortran libraries can be used from C++ ================================================================================ TEST checkFortranLinkingCxx from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:1062) TESTING: checkFortranLinkingCxx from config.compilers(config/BuildSystem/config/compilers.py:1062) Check that Fortran can be linked against C++ Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" extern "C" void d1chk_(void); void foo(void){d1chk_();} Popping language Cxx Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" extern "C" void d1chk_(void); void d1chk_(void){return;} Popping language Cxx Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.F Successful compile: Source: program main call d1chk() end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/cxxobj.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/confc.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/cxxobj.o:(.eh_frame+0x12): undefined reference to `__gxx_personality_v0' Popping language FC Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" extern "C" void d1chk_(void); void d1chk_(void){return;} Popping language Cxx Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.F Successful compile: Source: program main call d1chk() end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/cxxobj.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/confc.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language FC compilers: Fortran can link C++ functions using the C++ compiler libraries ================================================================================ TEST checkFortran90 from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:1097) TESTING: checkFortran90 from config.compilers(config/BuildSystem/config/compilers.py:1097) Determine whether the Fortran compiler handles F90 Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.F Successful compile: Source: program main INTEGER, PARAMETER :: int = SELECTED_INT_KIND(8) INTEGER (KIND=int) :: ierr ierr = 1 end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "USING_F90" to "1" Fortran compiler supports F90 Popping language FC ================================================================================ TEST checkFortran2003 from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:1110) TESTING: checkFortran2003 from config.compilers(config/BuildSystem/config/compilers.py:1110) Determine whether the Fortran compiler handles F2003 Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.F Successful compile: Source: program main use,intrinsic :: iso_c_binding Type(C_Ptr),Dimension(:),Pointer :: CArray character(kind=c_char),pointer :: nullc => null() character(kind=c_char,len=5),dimension(:),pointer::list1 allocate(list1(5)) CArray = (/(c_loc(list1(i)),i=1,5),c_loc(nullc)/) end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "USING_F2003" to "1" Fortran compiler supports F2003 Popping language FC ================================================================================ TEST checkFortran90Array from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:1130) TESTING: checkFortran90Array from config.compilers(config/BuildSystem/config/compilers.py:1130) Check for F90 array interfaces Executing: uname -s stdout: Linux Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include void f90arraytest_(void* a1, void* a2,void* a3, void* i) { printf("arrays [%p %p %p]\n",a1,a2,a3); fflush(stdout); return; } void f90ptrtest_(void* a1, void* a2,void* a3, void* i, void* p1 ,void* p2, void* p3) { printf("arrays [%p %p %p]\n",a1,a2,a3); if ((p1 == p3) && (p1 != p2)) { printf("pointers match! [%p %p] [%p]\n",p1,p3,p2); fflush(stdout); } else { printf("pointers do not match! [%p %p] [%p]\n",p1,p3,p2); fflush(stdout); exit(111); } return; } Popping language C Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.F Successful compile: Source: program main Interface Subroutine f90ptrtest(p1,p2,p3,i) integer, pointer :: p1(:,:) integer, pointer :: p2(:,:) integer, pointer :: p3(:,:) integer i End Subroutine End Interface integer, pointer :: ptr1(:,:),ptr2(:,:) integer, target :: array(6:8,9:21) integer in in = 25 ptr1 => array ptr2 => array call f90arraytest(ptr1,ptr2,ptr1,in) call f90ptrtest(ptr1,ptr2,ptr1,in) end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/fooobj.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest stdout: arrays [0x20000ac0 0x20000ac0 0x20000ac0] arrays [0x20000a60 0x20000a00 0x20000a60] pointers match! [0x20000a60 0x20000a60] [0x20000a00] Popping language FC Defined "HAVE_F90_2PTR_ARG" to "1" compilers: F90 compiler uses two arguments for array pointers ================================================================================ TEST checkFortranModuleInclude from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:1217) TESTING: checkFortranModuleInclude from config.compilers(config/BuildSystem/config/compilers.py:1217) Figures out what flag is used to specify the include path for Fortran modules Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.F Successful compile: Source: module configtest integer testint parameter (testint = 42) end module configtest Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/confdir -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.F Successful compile: Source: program main use configtest write(*,*) testint end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/confdir -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/configtest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl compilers: Fortran module include flag -I found Popping language FC ================================================================================ TEST checkFortranModuleOutput from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:1283) TESTING: checkFortranModuleOutput from config.compilers(config/BuildSystem/config/compilers.py:1283) Figures out what flag is used to specify the include path for Fortran modules Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -module /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/confdir -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.F Successful compile: Source: module configtest integer testint parameter (testint = 42) end module configtest compilers: Fortran module output flag -module failed Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -module:/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/confdir -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.F Successful compile: Source: module configtest integer testint parameter (testint = 42) end module configtest compilers: Fortran module output flag -module: failed Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -fmod=/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/confdir -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.F Possible ERROR while running compiler: stderr: frt: warning: Invalid suboption mod=/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/confdir specified for -f. Source: module configtest integer testint parameter (testint = 42) end module configtest compilers: Fortran module output flag -fmod= failed Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -J/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/confdir -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.F Possible ERROR while running compiler: stderr: frt: warning: -J/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/confdir is unrecognized option. This option is passed to the linker. Source: module configtest integer testint parameter (testint = 42) end module configtest compilers: Fortran module output flag -J failed Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -M/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/confdir -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers/conftest.F Successful compile: Source: module configtest integer testint parameter (testint = 42) end module configtest compilers: Fortran module output flag -M found Popping language FC ================================================================================ TEST setupFrameworkCompilers from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:1437) TESTING: setupFrameworkCompilers from config.compilers(config/BuildSystem/config/compilers.py:1437) ================================================================================ TEST configureClosure from config.utilities.closure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/closure.py:18) TESTING: configureClosure from config.utilities.closure(config/BuildSystem/config/utilities/closure.py:18) Determine if Apple ^close syntax is supported in C Pushing language C All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure/conftest.c Possible ERROR while running compiler: exit code 512 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure/conftest.c", line 6: error: expected an identifier int (^closure)(int);; ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include int main() { int (^closure)(int);; return 0; } Compile failed inside link ================================================================================ TEST configureFortranCPP from PETSc.options.fortranCPP(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/fortranCPP.py:27) TESTING: configureFortranCPP from PETSc.options.fortranCPP(config/PETSc/options/fortranCPP.py:27) Handle case where Fortran cannot preprocess properly Defined make rule ".f.o .f90.o .f95.o" with dependencies "" and code ['${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FC_FLAGS} ${FFLAGS} -o $@ $<'] Defined make rule ".f.a" with dependencies "" and code ['${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FC_FLAGS} ${FFLAGS} $<', '-${AR} ${AR_FLAGS} ${LIBNAME} $*.o', '-${RM} $*.o'] Defined make rule ".F.o .F90.o .F95.o" with dependencies "" and code ['${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FC_FLAGS} ${FFLAGS} ${FCPPFLAGS} -o $@ $<'] Defined make rule ".F.a" with dependencies "" and code ['${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FC_FLAGS} ${FFLAGS} ${FCPPFLAGS} $<', '-${AR} ${AR_FLAGS} ${LIBNAME} $*.o', '-${RM} $*.o'] Defined "USE_FORTRAN_INTERFACES" to "1" ================================================================================ TEST checkStdC from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:105) TESTING: checkStdC from config.headers(config/BuildSystem/config/headers.py:105) Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include int main() { ; return 0; } Source: #include "confdefs.h" #include "conffix.h" #include Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/string.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/string.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 34 "/usr/include/string.h" extern void *memcpy (void * __dest, const void * __src, size_t __n) ; extern void *memmove (void *__dest, const void *__src, size_t __n) ; extern void *memccpy (void * __dest, const void * __src, int __c, size_t __n) ; extern void *memset (void *__s, int __c, size_t __n) ; extern int memcmp (const void *__s1, const void *__s2, size_t __n) ; extern void *memchr (const void *__s, int __c, size_t __n) ; #line 80 "/usr/include/string.h" extern char *strcpy (char * __dest, const char * __src) ; extern char *strncpy (char * __dest, const char * __src, size_t __n) ; extern char *strcat (char * __dest, const char * __src) ; extern char *strncat (char * __dest, const char * __src, size_t __n) ; extern int strcmp (const char *__s1, const char *__s2) ; extern int strncmp (const char *__s1, const char *__s2, size_t __n) ; extern int strcoll (const char *__s1, const char *__s2) ; extern size_t strxfrm (char * __dest, const char * __src, size_t __n) ; #line 127 "/usr/include/string.h" extern char *strdup (const char *__s) ; #line 164 "/usr/include/string.h" extern char *strchr (const char *__s, int __c) ; extern char *strrchr (const char *__s, int __c) ; #line 180 "/usr/include/string.h" extern size_t strcspn (const char *__s, const char *__reject) ; extern size_t strspn (const char *__s, const char *__accept) ; extern char *strpbrk (const char *__s, const char *__accept) ; extern char *strstr (const char *__haystack, const char *__needle) ; extern char *strtok (char * __s, const char * __delim) ; extern char *__strtok_r (char * __s, const char * __delim, char ** __save_ptr) ; extern char *strtok_r (char * __s, const char * __delim, char ** __save_ptr) ; #line 238 "/usr/include/string.h" extern size_t strlen (const char *__s) ; #line 252 "/usr/include/string.h" extern char *strerror (int __errnum) ; extern int __xpg_strerror_r (int __errnum, char *__buf, size_t __buflen) ; #line 285 "/usr/include/string.h" extern void __bzero (void *__s, size_t __n) ; extern void bcopy (const void *__src, void *__dest, size_t __n) ; extern void bzero (void *__s, size_t __n) ; extern int bcmp (const void *__s1, const void *__s2, size_t __n) ; extern char *index (const char *__s, int __c) ; extern char *rindex (const char *__s, int __c) ; extern int ffs (int __i) ; #line 329 "/usr/include/string.h" extern int strcasecmp (const char *__s1, const char *__s2) ; extern int strncasecmp (const char *__s1, const char *__s2, size_t __n) ; #line 350 "/usr/include/string.h" extern char *strsep (char ** __stringp, const char * __delim) ; #line 396 "/usr/include/string.h" #line 431 "/usr/include/string.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Source: #include "confdefs.h" #include "conffix.h" #include Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/stdlib.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/stdlib.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef int wchar_t; #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 34 "/usr/include/stdlib.h" #line 95 "/usr/include/stdlib.h" typedef struct { int quot; int rem; } div_t; typedef struct { long int quot; long int rem; } ldiv_t; typedef struct { long long int quot; long long int rem; } lldiv_t; extern size_t __ctype_get_mb_cur_max (void) ; extern double atof (const char *__nptr) ; extern int atoi (const char *__nptr) ; extern long int atol (const char *__nptr) ; extern long long int atoll (const char *__nptr) ; extern double strtod (const char * __nptr, char ** __endptr) ; extern float strtof (const char * __nptr, char ** __endptr) ; extern long double strtold (const char * __nptr, char ** __endptr) ; extern long int strtol (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long int strtoul (const char * __nptr, char ** __endptr, int __base) ; extern long long int strtoq (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long long int strtouq (const char * __nptr, char ** __endptr, int __base) ; extern long long int strtoll (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long long int strtoull (const char * __nptr, char ** __endptr, int __base) ; #line 274 "/usr/include/stdlib.h" #line 305 "/usr/include/stdlib.h" extern char *l64a (long int __n) ; extern long int a64l (const char *__s) ; #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; typedef char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 321 "/usr/include/stdlib.h" extern long int random (void) ; extern void srandom (unsigned int __seed) ; extern char *initstate (unsigned int __seed, char *__statebuf, size_t __statelen) ; extern char *setstate (char *__statebuf) ; struct random_data { int32_t *fptr; int32_t *rptr; int32_t *state; int rand_type; int rand_deg; int rand_sep; int32_t *end_ptr; }; extern int random_r (struct random_data * __buf, int32_t * __result) ; extern int srandom_r (unsigned int __seed, struct random_data *__buf) ; extern int initstate_r (unsigned int __seed, char * __statebuf, size_t __statelen, struct random_data * __buf) ; extern int setstate_r (char * __statebuf, struct random_data * __buf) ; extern int rand (void) ; extern void srand (unsigned int __seed) ; extern int rand_r (unsigned int *__seed) ; extern double drand48 (void) ; extern double erand48 (unsigned short int __xsubi[3]) ; extern long int lrand48 (void) ; extern long int nrand48 (unsigned short int __xsubi[3]) ; extern long int mrand48 (void) ; extern long int jrand48 (unsigned short int __xsubi[3]) ; extern void srand48 (long int __seedval) ; extern unsigned short int *seed48 (unsigned short int __seed16v[3]) ; extern void lcong48 (unsigned short int __param[7]) ; struct drand48_data { unsigned short int __x[3]; unsigned short int __old_x[3]; unsigned short int __c; unsigned short int __init; unsigned long long int __a; }; extern int drand48_r (struct drand48_data * __buffer, double * __result) ; extern int erand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, double * __result) ; extern int lrand48_r (struct drand48_data * __buffer, long int * __result) ; extern int nrand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, long int * __result) ; extern int mrand48_r (struct drand48_data * __buffer, long int * __result) ; extern int jrand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, long int * __result) ; extern int srand48_r (long int __seedval, struct drand48_data *__buffer) ; extern int seed48_r (unsigned short int __seed16v[3], struct drand48_data *__buffer) ; extern int lcong48_r (unsigned short int __param[7], struct drand48_data *__buffer) ; extern void *malloc (size_t __size) ; extern void *calloc (size_t __nmemb, size_t __size) ; extern void *realloc (void *__ptr, size_t __size) ; extern void free (void *__ptr) ; extern void cfree (void *__ptr) ; #line 1 "/usr/include/alloca.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/alloca.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 26 "/usr/include/alloca.h" extern void *alloca (size_t __size) ; #line 498 "/usr/include/stdlib.h" extern void *valloc (size_t __size) ; extern int posix_memalign (void **__memptr, size_t __alignment, size_t __size) ; extern void abort (void) ; extern int atexit (void (*__func) (void)) ; extern int on_exit (void (*__func) (int __status, void *__arg), void *__arg) ; extern void exit (int __status) ; extern void _Exit (int __status) ; extern char *getenv (const char *__name) ; extern char *__secure_getenv (const char *__name) ; extern int putenv (char *__string) ; extern int setenv (const char *__name, const char *__value, int __replace) ; extern int unsetenv (const char *__name) ; extern int clearenv (void) ; extern char *mktemp (char *__template) ; extern int mkstemp (char *__template) ; #line 607 "/usr/include/stdlib.h" extern char *mkdtemp (char *__template) ; #line 638 "/usr/include/stdlib.h" extern int system (const char *__command) ; #line 655 "/usr/include/stdlib.h" extern char *realpath (const char * __name, char * __resolved) ; typedef int (*__compar_fn_t) (const void *, const void *); extern void *bsearch (const void *__key, const void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; extern void qsort (void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; extern int abs (int __x) ; extern long int labs (long int __x) ; extern long long int llabs (long long int __x) ; extern div_t div (int __numer, int __denom) ; extern ldiv_t ldiv (long int __numer, long int __denom) ; extern lldiv_t lldiv (long long int __numer, long long int __denom) ; extern char *ecvt (double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *fcvt (double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *gcvt (double __value, int __ndigit, char *__buf) ; extern char *qecvt (long double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *qfcvt (long double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *qgcvt (long double __value, int __ndigit, char *__buf) ; extern int ecvt_r (double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int fcvt_r (double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int qecvt_r (long double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int qfcvt_r (long double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int mblen (const char *__s, size_t __n) ; extern int mbtowc (wchar_t * __pwc, const char * __s, size_t __n) ; extern int wctomb (char *__s, wchar_t __wchar) ; extern size_t mbstowcs (wchar_t * __pwcs, const char * __s, size_t __n) ; extern size_t wcstombs (char * __s, const wchar_t * __pwcs, size_t __n) ; extern int rpmatch (const char *__response) ; #line 820 "/usr/include/stdlib.h" extern int posix_openpt (int __oflag) ; #line 851 "/usr/include/stdlib.h" #line 862 "/usr/include/stdlib.h" extern int getloadavg (double __loadavg[], int __nelem) ; #line 879 "/usr/include/stdlib.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #define ISLOWER(c) ('a' <= (c) && (c) <= 'z') #define TOUPPER(c) (ISLOWER(c) ? 'A' + ((c) - 'a') : (c)) #define XOR(e, f) (((e) && !(f)) || (!(e) && (f))) int main() { int i; for(i = 0; i < 256; i++) if (XOR(islower(i), ISLOWER(i)) || toupper(i) != TOUPPER(i)) exit(2); exit(0); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest Defined "STDC_HEADERS" to "1" ================================================================================ TEST checkStat from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:138) TESTING: checkStat from config.headers(config/BuildSystem/config/headers.py:138) Checks whether stat file-mode macros are broken, and defines STAT_MACROS_BROKEN if they are Source: #include "confdefs.h" #include "conffix.h" #include #include #if defined(S_ISBLK) && defined(S_IFDIR) # if S_ISBLK (S_IFDIR) You lose. # endif #endif #if defined(S_ISBLK) && defined(S_IFCHR) # if S_ISBLK (S_IFCHR) You lose. # endif #endif #if defined(S_ISLNK) && defined(S_IFREG) # if S_ISLNK (S_IFREG) You lose. # endif #endif #if defined(S_ISSOCK) && defined(S_IFREG) # if S_ISSOCK (S_IFREG) You lose. # endif #endif Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; typedef char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 5 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/sys/stat.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/stat.h" #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 40 "/usr/include/sys/stat.h" #line 63 "/usr/include/sys/stat.h" #line 82 "/usr/include/sys/stat.h" #line 104 "/usr/include/sys/stat.h" #line 1 "/usr/include/bits/stat.h" struct stat { __dev_t st_dev; unsigned short int __pad1; __ino_t st_ino; __mode_t st_mode; __nlink_t st_nlink; __uid_t st_uid; __gid_t st_gid; __dev_t st_rdev; unsigned short int __pad2; __off_t st_size; __blksize_t st_blksize; __blkcnt_t st_blocks; struct timespec st_atim; struct timespec st_mtim; struct timespec st_ctim; #line 85 "/usr/include/bits/stat.h" unsigned long int __unused4; unsigned long int __unused5; }; #line 132 "/usr/include/bits/stat.h" #line 151 "/usr/include/bits/stat.h" #line 166 "/usr/include/bits/stat.h" #line 108 "/usr/include/sys/stat.h" #line 126 "/usr/include/sys/stat.h" #line 141 "/usr/include/sys/stat.h" extern int stat (const char * __file, struct stat * __buf) ; extern int fstat (int __fd, struct stat *__buf) ; #line 232 "/usr/include/sys/stat.h" #line 256 "/usr/include/sys/stat.h" extern int lstat (const char * __file, struct stat * __buf) ; #line 279 "/usr/include/sys/stat.h" extern int chmod (const char *__file, __mode_t __mode) ; extern int lchmod (const char *__file, __mode_t __mode) ; extern int fchmod (int __fd, __mode_t __mode) ; #line 304 "/usr/include/sys/stat.h" extern __mode_t umask (__mode_t __mask) ; extern int mkdir (const char *__path, __mode_t __mode) ; #line 328 "/usr/include/sys/stat.h" extern int mknod (const char *__path, __mode_t __mode, __dev_t __dev) ; #line 344 "/usr/include/sys/stat.h" extern int mkfifo (const char *__path, __mode_t __mode) ; #line 357 "/usr/include/sys/stat.h" #line 366 "/usr/include/sys/stat.h" #line 394 "/usr/include/sys/stat.h" extern int __fxstat (int __ver, int __fildes, struct stat *__stat_buf) ; extern int __xstat (int __ver, const char *__filename, struct stat *__stat_buf) ; extern int __lxstat (int __ver, const char *__filename, struct stat *__stat_buf) ; extern int __fxstatat (int __ver, int __fildes, const char *__filename, struct stat *__stat_buf, int __flag) ; #line 428 "/usr/include/sys/stat.h" #line 440 "/usr/include/sys/stat.h" extern int __xmknod (int __ver, const char *__path, __mode_t __mode, __dev_t *__dev) ; extern int __xmknodat (int __ver, int __fd, const char *__path, __mode_t __mode, __dev_t *__dev) ; #line 531 "/usr/include/sys/stat.h" #line 6 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" ================================================================================ TEST checkSysWait from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:173) TESTING: checkSysWait from config.headers(config/BuildSystem/config/headers.py:173) Check for POSIX.1 compatible sys/wait.h, and defines HAVE_SYS_WAIT_H if found Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #ifndef WEXITSTATUS #define WEXITSTATUS(stat_val) ((unsigned)(stat_val) >> 8) #endif #ifndef WIFEXITED #define WIFEXITED(stat_val) (((stat_val) & 255) == 0) #endif int main() { int s; wait (&s); s = WIFEXITED (s) ? WEXITSTATUS (s) : 1; ; return 0; } Defined "HAVE_SYS_WAIT_H" to "1" ================================================================================ TEST checkTime from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:195) TESTING: checkTime from config.headers(config/BuildSystem/config/headers.py:195) Checks if you can safely include both and , and if so defines TIME_WITH_SYS_TIME Checking for header: time.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 30 "/usr/include/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 40 "/usr/include/time.h" #line 1 "/usr/include/bits/time.h" #line 43 "/usr/include/bits/time.h" #line 44 "/usr/include/time.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 58 "/usr/include/time.h" typedef __clock_t clock_t; typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; struct timespec { __time_t tv_sec; long int tv_nsec; }; struct tm { int tm_sec; int tm_min; int tm_hour; int tm_mday; int tm_mon; int tm_year; int tm_wday; int tm_yday; int tm_isdst; long int tm_gmtoff; const char *tm_zone; }; struct itimerspec { struct timespec it_interval; struct timespec it_value; }; struct sigevent; typedef __pid_t pid_t; extern clock_t clock (void) ; extern time_t time (time_t *__timer) ; extern double difftime (time_t __time1, time_t __time0) ; extern time_t mktime (struct tm *__tp) ; extern size_t strftime (char * __s, size_t __maxsize, const char * __format, const struct tm * __tp) ; #line 212 "/usr/include/time.h" #line 227 "/usr/include/time.h" extern struct tm *gmtime (const time_t *__timer) ; extern struct tm *localtime (const time_t *__timer) ; extern struct tm *gmtime_r (const time_t * __timer, struct tm * __tp) ; extern struct tm *localtime_r (const time_t * __timer, struct tm * __tp) ; extern char *asctime (const struct tm *__tp) ; extern char *ctime (const time_t *__timer) ; extern char *asctime_r (const struct tm * __tp, char * __buf) ; extern char *ctime_r (const time_t * __timer, char * __buf) ; extern char *__tzname[2]; extern int __daylight; extern long int __timezone; extern char *tzname[2]; extern void tzset (void) ; extern int daylight; extern long int timezone; extern int stime (const time_t *__when) ; extern time_t timegm (struct tm *__tp) ; extern time_t timelocal (struct tm *__tp) ; extern int dysize (int __year) ; extern int nanosleep (const struct timespec *__requested_time, struct timespec *__remaining); extern int clock_getres (clockid_t __clock_id, struct timespec *__res) ; extern int clock_gettime (clockid_t __clock_id, struct timespec *__tp) ; extern int clock_settime (clockid_t __clock_id, const struct timespec *__tp) ; extern int clock_nanosleep (clockid_t __clock_id, int __flags, const struct timespec *__req, struct timespec *__rem); extern int clock_getcpuclockid (pid_t __pid, clockid_t *__clock_id) ; extern int timer_create (clockid_t __clock_id, struct sigevent * __evp, timer_t * __timerid) ; extern int timer_delete (timer_t __timerid) ; extern int timer_settime (timer_t __timerid, int __flags, const struct itimerspec * __value, struct itimerspec * __ovalue) ; extern int timer_gettime (timer_t __timerid, struct itimerspec *__value) ; extern int timer_getoverrun (timer_t __timerid) ; #line 400 "/usr/include/time.h" #line 415 "/usr/include/time.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_TIME_H" to "1" Checking for header: sys/time.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/sys/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 24 "/usr/include/sys/time.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 26 "/usr/include/sys/time.h" #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 28 "/usr/include/sys/time.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 30 "/usr/include/sys/time.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 32 "/usr/include/sys/time.h" #line 52 "/usr/include/sys/time.h" struct timezone { int tz_minuteswest; int tz_dsttime; }; typedef struct timezone * __timezone_ptr_t; extern int gettimeofday (struct timeval * __tv, __timezone_ptr_t __tz) ; extern int settimeofday (const struct timeval *__tv, const struct timezone *__tz) ; extern int adjtime (const struct timeval *__delta, struct timeval *__olddelta) ; enum __itimer_which { ITIMER_REAL = 0, ITIMER_VIRTUAL = 1, ITIMER_PROF = 2 }; struct itimerval { struct timeval it_interval; struct timeval it_value; }; typedef int __itimer_which_t; extern int getitimer (__itimer_which_t __which, struct itimerval *__value) ; extern int setitimer (__itimer_which_t __which, const struct itimerval * __new, struct itimerval * __old) ; extern int utimes (const char *__file, const struct timeval __tvp[2]) ; extern int lutimes (const char *__file, const struct timeval __tvp[2]) ; extern int futimes (int __fd, const struct timeval __tvp[2]) ; #line 159 "/usr/include/sys/time.h" #line 190 "/usr/include/sys/time.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_TIME_H" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include int main() { struct tm *tp = 0; if (tp); ; return 0; } Defined "TIME_WITH_SYS_TIME" to "1" ================================================================================ TEST checkMath from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:203) TESTING: checkMath from config.headers(config/BuildSystem/config/headers.py:203) Checks for the math headers and defines Checking for header: math.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/math.h" #line 1 "/usr/include/math.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 29 "/usr/include/math.h" #line 1 "/usr/include/bits/huge_val.h" #line 40 "/usr/include/bits/huge_val.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 42 "/usr/include/bits/huge_val.h" typedef union { unsigned char __c[8]; double __d; } __huge_val_t; #line 51 "/usr/include/bits/huge_val.h" static __huge_val_t __huge_val = { { 0x7f, 0xf0, 0, 0, 0, 0, 0, 0 } }; #line 35 "/usr/include/math.h" #line 1 "/usr/include/bits/huge_valf.h" #line 40 "/usr/include/bits/huge_valf.h" typedef union { unsigned char __c[4]; float __f; } __huge_valf_t; #line 49 "/usr/include/bits/huge_valf.h" static __huge_valf_t __huge_valf = { { 0x7f, 0x80, 0, 0 } }; #line 37 "/usr/include/math.h" #line 1 "/usr/include/bits/huge_vall.h" #line 34 "/usr/include/bits/huge_vall.h" typedef union { unsigned char __c[16]; long double __ld; } __huge_vall_t; #line 43 "/usr/include/bits/huge_vall.h" static __huge_vall_t __huge_vall = { { 0x7f, 0xff, 0,0,0,0,0,0,0,0,0,0,0,0,0,0 } }; #line 38 "/usr/include/math.h" #line 1 "/usr/include/bits/inf.h" #line 41 "/usr/include/math.h" #line 1 "/usr/include/bits/nan.h" #line 39 "/usr/include/bits/nan.h" #line 48 "/usr/include/bits/nan.h" static union { unsigned char __c[4]; float __d; } __nan_union = { { 0x7f, 0xc0, 0, 0 } }; #line 44 "/usr/include/math.h" #line 1 "/usr/include/bits/mathdef.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/mathdef.h" #line 47 "/usr/include/bits/mathdef.h" typedef double float_t; typedef double double_t; #line 48 "/usr/include/math.h" #line 66 "/usr/include/math.h" #line 1 "/usr/include/bits/mathcalls.h" extern double acos (double __x) ; extern double __acos (double __x) ; extern double asin (double __x) ; extern double __asin (double __x) ; extern double atan (double __x) ; extern double __atan (double __x) ; extern double atan2 (double __y, double __x) ; extern double __atan2 (double __y, double __x) ; extern double cos (double __x) ; extern double __cos (double __x) ; extern double sin (double __x) ; extern double __sin (double __x) ; extern double tan (double __x) ; extern double __tan (double __x) ; extern double cosh (double __x) ; extern double __cosh (double __x) ; extern double sinh (double __x) ; extern double __sinh (double __x) ; extern double tanh (double __x) ; extern double __tanh (double __x) ; extern double acosh (double __x) ; extern double __acosh (double __x) ; extern double asinh (double __x) ; extern double __asinh (double __x) ; extern double atanh (double __x) ; extern double __atanh (double __x) ; extern double exp (double __x) ; extern double __exp (double __x) ; extern double frexp (double __x, int *__exponent) ; extern double __frexp (double __x, int *__exponent) ; extern double ldexp (double __x, int __exponent) ; extern double __ldexp (double __x, int __exponent) ; extern double log (double __x) ; extern double __log (double __x) ; extern double log10 (double __x) ; extern double __log10 (double __x) ; extern double modf (double __x, double *__iptr) ; extern double __modf (double __x, double *__iptr) ; #line 125 "/usr/include/bits/mathcalls.h" extern double expm1 (double __x) ; extern double __expm1 (double __x) ; extern double log1p (double __x) ; extern double __log1p (double __x) ; extern double logb (double __x) ; extern double __logb (double __x) ; extern double exp2 (double __x) ; extern double __exp2 (double __x) ; extern double log2 (double __x) ; extern double __log2 (double __x) ; extern double pow (double __x, double __y) ; extern double __pow (double __x, double __y) ; extern double sqrt (double __x) ; extern double __sqrt (double __x) ; extern double hypot (double __x, double __y) ; extern double __hypot (double __x, double __y) ; extern double cbrt (double __x) ; extern double __cbrt (double __x) ; extern double ceil (double __x) ; extern double __ceil (double __x) ; extern double fabs (double __x) ; extern double __fabs (double __x) ; extern double floor (double __x) ; extern double __floor (double __x) ; extern double fmod (double __x, double __y) ; extern double __fmod (double __x, double __y) ; extern int __isinf (double __value) ; extern int __finite (double __value) ; extern int isinf (double __value) ; extern int finite (double __value) ; extern double drem (double __x, double __y) ; extern double __drem (double __x, double __y) ; extern double significand (double __x) ; extern double __significand (double __x) ; extern double copysign (double __x, double __y) ; extern double __copysign (double __x, double __y) ; extern double nan (const char *__tagb) ; extern double __nan (const char *__tagb) ; extern int __isnan (double __value) ; extern int isnan (double __value) ; extern double j0 (double) ; extern double __j0 (double) ; extern double j1 (double) ; extern double __j1 (double) ; extern double jn (int, double) ; extern double __jn (int, double) ; extern double y0 (double) ; extern double __y0 (double) ; extern double y1 (double) ; extern double __y1 (double) ; extern double yn (int, double) ; extern double __yn (int, double) ; extern double erf (double) ; extern double __erf (double) ; extern double erfc (double) ; extern double __erfc (double) ; extern double lgamma (double) ; extern double __lgamma (double) ; extern double tgamma (double) ; extern double __tgamma (double) ; extern double gamma (double) ; extern double __gamma (double) ; extern double lgamma_r (double, int *__signgamp) ; extern double __lgamma_r (double, int *__signgamp) ; extern double rint (double __x) ; extern double __rint (double __x) ; extern double nextafter (double __x, double __y) ; extern double __nextafter (double __x, double __y) ; extern double nexttoward (double __x, long double __y) ; extern double __nexttoward (double __x, long double __y) ; extern double remainder (double __x, double __y) ; extern double __remainder (double __x, double __y) ; extern double scalbn (double __x, int __n) ; extern double __scalbn (double __x, int __n) ; extern int ilogb (double __x) ; extern int __ilogb (double __x) ; extern double scalbln (double __x, long int __n) ; extern double __scalbln (double __x, long int __n) ; extern double nearbyint (double __x) ; extern double __nearbyint (double __x) ; extern double round (double __x) ; extern double __round (double __x) ; extern double trunc (double __x) ; extern double __trunc (double __x) ; extern double remquo (double __x, double __y, int *__quo) ; extern double __remquo (double __x, double __y, int *__quo) ; extern long int lrint (double __x) ; extern long int __lrint (double __x) ; extern long long int llrint (double __x) ; extern long long int __llrint (double __x) ; extern long int lround (double __x) ; extern long int __lround (double __x) ; extern long long int llround (double __x) ; extern long long int __llround (double __x) ; extern double fdim (double __x, double __y) ; extern double __fdim (double __x, double __y) ; extern double fmax (double __x, double __y) ; extern double __fmax (double __x, double __y) ; extern double fmin (double __x, double __y) ; extern double __fmin (double __x, double __y) ; extern int __fpclassify (double __value) ; extern int __signbit (double __value) ; extern double fma (double __x, double __y, double __z) ; extern double __fma (double __x, double __y, double __z) ; extern double scalb (double __x, double __n) ; extern double __scalb (double __x, double __n) ; #line 72 "/usr/include/math.h" #line 1 "/usr/include/bits/mathcalls.h" extern float acosf (float __x) ; extern float __acosf (float __x) ; extern float asinf (float __x) ; extern float __asinf (float __x) ; extern float atanf (float __x) ; extern float __atanf (float __x) ; extern float atan2f (float __y, float __x) ; extern float __atan2f (float __y, float __x) ; extern float cosf (float __x) ; extern float __cosf (float __x) ; extern float sinf (float __x) ; extern float __sinf (float __x) ; extern float tanf (float __x) ; extern float __tanf (float __x) ; extern float coshf (float __x) ; extern float __coshf (float __x) ; extern float sinhf (float __x) ; extern float __sinhf (float __x) ; extern float tanhf (float __x) ; extern float __tanhf (float __x) ; extern float acoshf (float __x) ; extern float __acoshf (float __x) ; extern float asinhf (float __x) ; extern float __asinhf (float __x) ; extern float atanhf (float __x) ; extern float __atanhf (float __x) ; extern float expf (float __x) ; extern float __expf (float __x) ; extern float frexpf (float __x, int *__exponent) ; extern float __frexpf (float __x, int *__exponent) ; extern float ldexpf (float __x, int __exponent) ; extern float __ldexpf (float __x, int __exponent) ; extern float logf (float __x) ; extern float __logf (float __x) ; extern float log10f (float __x) ; extern float __log10f (float __x) ; extern float modff (float __x, float *__iptr) ; extern float __modff (float __x, float *__iptr) ; #line 125 "/usr/include/bits/mathcalls.h" extern float expm1f (float __x) ; extern float __expm1f (float __x) ; extern float log1pf (float __x) ; extern float __log1pf (float __x) ; extern float logbf (float __x) ; extern float __logbf (float __x) ; extern float exp2f (float __x) ; extern float __exp2f (float __x) ; extern float log2f (float __x) ; extern float __log2f (float __x) ; extern float powf (float __x, float __y) ; extern float __powf (float __x, float __y) ; extern float sqrtf (float __x) ; extern float __sqrtf (float __x) ; extern float hypotf (float __x, float __y) ; extern float __hypotf (float __x, float __y) ; extern float cbrtf (float __x) ; extern float __cbrtf (float __x) ; extern float ceilf (float __x) ; extern float __ceilf (float __x) ; extern float fabsf (float __x) ; extern float __fabsf (float __x) ; extern float floorf (float __x) ; extern float __floorf (float __x) ; extern float fmodf (float __x, float __y) ; extern float __fmodf (float __x, float __y) ; extern int __isinff (float __value) ; extern int __finitef (float __value) ; extern int isinff (float __value) ; extern int finitef (float __value) ; extern float dremf (float __x, float __y) ; extern float __dremf (float __x, float __y) ; extern float significandf (float __x) ; extern float __significandf (float __x) ; extern float copysignf (float __x, float __y) ; extern float __copysignf (float __x, float __y) ; extern float nanf (const char *__tagb) ; extern float __nanf (const char *__tagb) ; extern int __isnanf (float __value) ; extern int isnanf (float __value) ; extern float j0f (float) ; extern float __j0f (float) ; extern float j1f (float) ; extern float __j1f (float) ; extern float jnf (int, float) ; extern float __jnf (int, float) ; extern float y0f (float) ; extern float __y0f (float) ; extern float y1f (float) ; extern float __y1f (float) ; extern float ynf (int, float) ; extern float __ynf (int, float) ; extern float erff (float) ; extern float __erff (float) ; extern float erfcf (float) ; extern float __erfcf (float) ; extern float lgammaf (float) ; extern float __lgammaf (float) ; extern float tgammaf (float) ; extern float __tgammaf (float) ; extern float gammaf (float) ; extern float __gammaf (float) ; extern float lgammaf_r (float, int *__signgamp) ; extern float __lgammaf_r (float, int *__signgamp) ; extern float rintf (float __x) ; extern float __rintf (float __x) ; extern float nextafterf (float __x, float __y) ; extern float __nextafterf (float __x, float __y) ; extern float nexttowardf (float __x, long double __y) ; extern float __nexttowardf (float __x, long double __y) ; extern float remainderf (float __x, float __y) ; extern float __remainderf (float __x, float __y) ; extern float scalbnf (float __x, int __n) ; extern float __scalbnf (float __x, int __n) ; extern int ilogbf (float __x) ; extern int __ilogbf (float __x) ; extern float scalblnf (float __x, long int __n) ; extern float __scalblnf (float __x, long int __n) ; extern float nearbyintf (float __x) ; extern float __nearbyintf (float __x) ; extern float roundf (float __x) ; extern float __roundf (float __x) ; extern float truncf (float __x) ; extern float __truncf (float __x) ; extern float remquof (float __x, float __y, int *__quo) ; extern float __remquof (float __x, float __y, int *__quo) ; extern long int lrintf (float __x) ; extern long int __lrintf (float __x) ; extern long long int llrintf (float __x) ; extern long long int __llrintf (float __x) ; extern long int lroundf (float __x) ; extern long int __lroundf (float __x) ; extern long long int llroundf (float __x) ; extern long long int __llroundf (float __x) ; extern float fdimf (float __x, float __y) ; extern float __fdimf (float __x, float __y) ; extern float fmaxf (float __x, float __y) ; extern float __fmaxf (float __x, float __y) ; extern float fminf (float __x, float __y) ; extern float __fminf (float __x, float __y) ; extern int __fpclassifyf (float __value) ; extern int __signbitf (float __value) ; extern float fmaf (float __x, float __y, float __z) ; extern float __fmaf (float __x, float __y, float __z) ; extern float scalbf (float __x, float __n) ; extern float __scalbf (float __x, float __n) ; #line 95 "/usr/include/math.h" #line 129 "/usr/include/math.h" #line 1 "/usr/include/bits/mathcalls.h" extern long double acosl (long double __x) ; extern long double __acosl (long double __x) ; extern long double asinl (long double __x) ; extern long double __asinl (long double __x) ; extern long double atanl (long double __x) ; extern long double __atanl (long double __x) ; extern long double atan2l (long double __y, long double __x) ; extern long double __atan2l (long double __y, long double __x) ; extern long double cosl (long double __x) ; extern long double __cosl (long double __x) ; extern long double sinl (long double __x) ; extern long double __sinl (long double __x) ; extern long double tanl (long double __x) ; extern long double __tanl (long double __x) ; extern long double coshl (long double __x) ; extern long double __coshl (long double __x) ; extern long double sinhl (long double __x) ; extern long double __sinhl (long double __x) ; extern long double tanhl (long double __x) ; extern long double __tanhl (long double __x) ; extern long double acoshl (long double __x) ; extern long double __acoshl (long double __x) ; extern long double asinhl (long double __x) ; extern long double __asinhl (long double __x) ; extern long double atanhl (long double __x) ; extern long double __atanhl (long double __x) ; extern long double expl (long double __x) ; extern long double __expl (long double __x) ; extern long double frexpl (long double __x, int *__exponent) ; extern long double __frexpl (long double __x, int *__exponent) ; extern long double ldexpl (long double __x, int __exponent) ; extern long double __ldexpl (long double __x, int __exponent) ; extern long double logl (long double __x) ; extern long double __logl (long double __x) ; extern long double log10l (long double __x) ; extern long double __log10l (long double __x) ; extern long double modfl (long double __x, long double *__iptr) ; extern long double __modfl (long double __x, long double *__iptr) ; #line 125 "/usr/include/bits/mathcalls.h" extern long double expm1l (long double __x) ; extern long double __expm1l (long double __x) ; extern long double log1pl (long double __x) ; extern long double __log1pl (long double __x) ; extern long double logbl (long double __x) ; extern long double __logbl (long double __x) ; extern long double exp2l (long double __x) ; extern long double __exp2l (long double __x) ; extern long double log2l (long double __x) ; extern long double __log2l (long double __x) ; extern long double powl (long double __x, long double __y) ; extern long double __powl (long double __x, long double __y) ; extern long double sqrtl (long double __x) ; extern long double __sqrtl (long double __x) ; extern long double hypotl (long double __x, long double __y) ; extern long double __hypotl (long double __x, long double __y) ; extern long double cbrtl (long double __x) ; extern long double __cbrtl (long double __x) ; extern long double ceill (long double __x) ; extern long double __ceill (long double __x) ; extern long double fabsl (long double __x) ; extern long double __fabsl (long double __x) ; extern long double floorl (long double __x) ; extern long double __floorl (long double __x) ; extern long double fmodl (long double __x, long double __y) ; extern long double __fmodl (long double __x, long double __y) ; extern int __isinfl (long double __value) ; extern int __finitel (long double __value) ; extern int isinfl (long double __value) ; extern int finitel (long double __value) ; extern long double dreml (long double __x, long double __y) ; extern long double __dreml (long double __x, long double __y) ; extern long double significandl (long double __x) ; extern long double __significandl (long double __x) ; extern long double copysignl (long double __x, long double __y) ; extern long double __copysignl (long double __x, long double __y) ; extern long double nanl (const char *__tagb) ; extern long double __nanl (const char *__tagb) ; extern int __isnanl (long double __value) ; extern int isnanl (long double __value) ; extern long double j0l (long double) ; extern long double __j0l (long double) ; extern long double j1l (long double) ; extern long double __j1l (long double) ; extern long double jnl (int, long double) ; extern long double __jnl (int, long double) ; extern long double y0l (long double) ; extern long double __y0l (long double) ; extern long double y1l (long double) ; extern long double __y1l (long double) ; extern long double ynl (int, long double) ; extern long double __ynl (int, long double) ; extern long double erfl (long double) ; extern long double __erfl (long double) ; extern long double erfcl (long double) ; extern long double __erfcl (long double) ; extern long double lgammal (long double) ; extern long double __lgammal (long double) ; extern long double tgammal (long double) ; extern long double __tgammal (long double) ; extern long double gammal (long double) ; extern long double __gammal (long double) ; extern long double lgammal_r (long double, int *__signgamp) ; extern long double __lgammal_r (long double, int *__signgamp) ; extern long double rintl (long double __x) ; extern long double __rintl (long double __x) ; extern long double nextafterl (long double __x, long double __y) ; extern long double __nextafterl (long double __x, long double __y) ; extern long double nexttowardl (long double __x, long double __y) ; extern long double __nexttowardl (long double __x, long double __y) ; extern long double remainderl (long double __x, long double __y) ; extern long double __remainderl (long double __x, long double __y) ; extern long double scalbnl (long double __x, int __n) ; extern long double __scalbnl (long double __x, int __n) ; extern int ilogbl (long double __x) ; extern int __ilogbl (long double __x) ; extern long double scalblnl (long double __x, long int __n) ; extern long double __scalblnl (long double __x, long int __n) ; extern long double nearbyintl (long double __x) ; extern long double __nearbyintl (long double __x) ; extern long double roundl (long double __x) ; extern long double __roundl (long double __x) ; extern long double truncl (long double __x) ; extern long double __truncl (long double __x) ; extern long double remquol (long double __x, long double __y, int *__quo) ; extern long double __remquol (long double __x, long double __y, int *__quo) ; extern long int lrintl (long double __x) ; extern long int __lrintl (long double __x) ; extern long long int llrintl (long double __x) ; extern long long int __llrintl (long double __x) ; extern long int lroundl (long double __x) ; extern long int __lroundl (long double __x) ; extern long long int llroundl (long double __x) ; extern long long int __llroundl (long double __x) ; extern long double fdiml (long double __x, long double __y) ; extern long double __fdiml (long double __x, long double __y) ; extern long double fmaxl (long double __x, long double __y) ; extern long double __fmaxl (long double __x, long double __y) ; extern long double fminl (long double __x, long double __y) ; extern long double __fminl (long double __x, long double __y) ; extern int __fpclassifyl (long double __value) ; extern int __signbitl (long double __value) ; extern long double fmal (long double __x, long double __y, long double __z) ; extern long double __fmal (long double __x, long double __y, long double __z) ; extern long double scalbl (long double __x, long double __n) ; extern long double __scalbl (long double __x, long double __n) ; #line 142 "/usr/include/math.h" extern int signgam; enum { FP_NAN, FP_INFINITE, FP_ZERO, FP_SUBNORMAL, FP_NORMAL }; #line 223 "/usr/include/math.h" #line 235 "/usr/include/math.h" #line 247 "/usr/include/math.h" #line 263 "/usr/include/math.h" #line 275 "/usr/include/math.h" typedef enum { _IEEE_ = -1, _SVID_, _XOPEN_, _POSIX_, _ISOC_ } _LIB_VERSION_TYPE; extern _LIB_VERSION_TYPE _LIB_VERSION; struct exception { int type; char *name; double arg1; double arg2; double retval; }; extern int matherr (struct exception *__exc); #line 334 "/usr/include/math.h" #line 346 "/usr/include/math.h" #line 364 "/usr/include/math.h" #line 383 "/usr/include/math.h" #line 406 "/usr/include/math.h" #line 422 "/usr/include/math.h" #line 430 "/usr/include/math.h" #line 438 "/usr/include/math.h" #line 446 "/usr/include/math.h" #line 454 "/usr/include/math.h" #line 462 "/usr/include/math.h" #line 3 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/math.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_MATH_H" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double pi = M_PI; if (pi); ; return 0; } Found math #defines, like M_PI ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/socket.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/sys/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/socket.h" #line 1 "/usr/include/sys/uio.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/sys/uio.h" #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; typedef char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 25 "/usr/include/sys/uio.h" #line 1 "/usr/include/bits/uio.h" struct iovec { void *iov_base; size_t iov_len; }; #line 30 "/usr/include/sys/uio.h" extern ssize_t readv (int __fd, const struct iovec *__iovec, int __count); extern ssize_t writev (int __fd, const struct iovec *__iovec, int __count); #line 29 "/usr/include/sys/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 31 "/usr/include/sys/socket.h" #line 1 "/usr/include/bits/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 31 "/usr/include/bits/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 7 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "/usr/include/bits/posix1_lim.h" #line 1 "/usr/include/bits/local_lim.h" #line 34 "/usr/include/bits/local_lim.h" #line 1 "/usr/include/linux/limits.h" #line 17 "/usr/include/linux/limits.h" #line 37 "/usr/include/bits/local_lim.h" #line 154 "/usr/include/bits/posix1_lim.h" #line 62 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "/usr/include/bits/posix2_lim.h" #line 87 "/usr/include/bits/posix2_lim.h" #line 66 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 33 "/usr/include/bits/socket.h" typedef __socklen_t socklen_t; enum __socket_type { SOCK_STREAM = 1, SOCK_DGRAM = 2, SOCK_RAW = 3, SOCK_RDM = 4, SOCK_SEQPACKET = 5, SOCK_PACKET = 10 }; #line 96 "/usr/include/bits/socket.h" #line 130 "/usr/include/bits/socket.h" #line 142 "/usr/include/bits/socket.h" #line 1 "/usr/include/bits/sockaddr.h" typedef unsigned short int sa_family_t; #line 148 "/usr/include/bits/socket.h" struct sockaddr { sa_family_t sa_family; char sa_data[14]; }; #line 166 "/usr/include/bits/socket.h" struct sockaddr_storage { sa_family_t ss_family; __uint64_t __ss_align; char __ss_padding[(128 - (2 * sizeof (__uint64_t)))]; }; enum { MSG_OOB = 0x01, MSG_PEEK = 0x02, MSG_DONTROUTE = 0x04, #line 189 "/usr/include/bits/socket.h" MSG_CTRUNC = 0x08, MSG_PROXY = 0x10, MSG_TRUNC = 0x20, MSG_DONTWAIT = 0x40, MSG_EOR = 0x80, MSG_WAITALL = 0x100, MSG_FIN = 0x200, MSG_SYN = 0x400, MSG_CONFIRM = 0x800, MSG_RST = 0x1000, MSG_ERRQUEUE = 0x2000, MSG_NOSIGNAL = 0x4000, MSG_MORE = 0x8000, MSG_CMSG_CLOEXEC = 0x40000000 }; struct msghdr { void *msg_name; socklen_t msg_namelen; struct iovec *msg_iov; size_t msg_iovlen; void *msg_control; size_t msg_controllen; int msg_flags; }; struct cmsghdr { size_t cmsg_len; int cmsg_level; int cmsg_type; unsigned char __cmsg_data []; }; #line 272 "/usr/include/bits/socket.h" extern struct cmsghdr *__cmsg_nxthdr (struct msghdr *__mhdr, struct cmsghdr *__cmsg) ; #line 297 "/usr/include/bits/socket.h" enum { SCM_RIGHTS = 0x01 , SCM_CREDENTIALS = 0x02 }; struct ucred { pid_t pid; uid_t uid; gid_t gid; }; #line 1 "/usr/include/asm/socket.h" #line 1 "/usr/include/asm-s64fx/socket.h" #line 1 "/usr/include/asm/sockios.h" #line 1 "/usr/include/asm-s64fx/sockios.h" #line 12 "/usr/include/asm-s64fx/sockios.h" #line 6 "/usr/include/asm/sockios.h" #line 6 "/usr/include/asm-s64fx/socket.h" #line 19 "/usr/include/asm-s64fx/socket.h" #line 26 "/usr/include/asm-s64fx/socket.h" #line 36 "/usr/include/asm-s64fx/socket.h" #line 6 "/usr/include/asm/socket.h" #line 321 "/usr/include/bits/socket.h" struct linger { int l_onoff; int l_linger; }; #line 37 "/usr/include/sys/socket.h" struct osockaddr { unsigned short int sa_family; unsigned char sa_data[14]; }; enum { SHUT_RD = 0, SHUT_WR, SHUT_RDWR }; #line 96 "/usr/include/sys/socket.h" extern int socket (int __domain, int __type, int __protocol) ; extern int socketpair (int __domain, int __type, int __protocol, int __fds[2]) ; extern int bind (int __fd, const struct sockaddr * __addr, socklen_t __len) ; extern int getsockname (int __fd, struct sockaddr * __addr, socklen_t * __len) ; extern int connect (int __fd, const struct sockaddr * __addr, socklen_t __len); extern int getpeername (int __fd, struct sockaddr * __addr, socklen_t * __len) ; extern ssize_t send (int __fd, const void *__buf, size_t __n, int __flags); extern ssize_t recv (int __fd, void *__buf, size_t __n, int __flags); extern ssize_t sendto (int __fd, const void *__buf, size_t __n, int __flags, const struct sockaddr * __addr, socklen_t __addr_len); extern ssize_t recvfrom (int __fd, void * __buf, size_t __n, int __flags, struct sockaddr * __addr, socklen_t * __addr_len); extern ssize_t sendmsg (int __fd, const struct msghdr *__message, int __flags); extern ssize_t recvmsg (int __fd, struct msghdr *__message, int __flags); extern int getsockopt (int __fd, int __level, int __optname, void * __optval, socklen_t * __optlen) ; extern int setsockopt (int __fd, int __level, int __optname, const void *__optval, socklen_t __optlen) ; extern int listen (int __fd, int __n) ; extern int accept (int __fd, struct sockaddr * __addr, socklen_t * __addr_len); extern int shutdown (int __fd, int __how) ; extern int sockatmark (int __fd) ; extern int isfdtype (int __fd, int __fdtype) ; #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_SOCKET_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/types.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; typedef char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_TYPES_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: malloc.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/malloc.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/malloc.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef long ptrdiff_t; #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef int wchar_t; #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 26 "/usr/include/malloc.h" #line 40 "/usr/include/malloc.h" extern void *malloc (size_t __size) ; extern void *calloc (size_t __nmemb, size_t __size) ; extern void *realloc (void *__ptr, size_t __size) ; extern void free (void *__ptr); extern void cfree (void *__ptr); extern void *memalign (size_t __alignment, size_t __size) ; extern void *valloc (size_t __size) ; extern void * pvalloc (size_t __size) ; extern void *(*__morecore) (ptrdiff_t __size); extern void *__default_morecore (ptrdiff_t __size) ; struct mallinfo { int arena; int ordblks; int smblks; int hblks; int hblkhd; int usmblks; int fsmblks; int uordblks; int fordblks; int keepcost; }; extern struct mallinfo mallinfo (void); #line 122 "/usr/include/malloc.h" #line 130 "/usr/include/malloc.h" extern int mallopt (int __param, int __val); extern int malloc_trim (size_t __pad); extern size_t malloc_usable_size (void *__ptr); extern void malloc_stats (void); extern void *malloc_get_state (void); extern int malloc_set_state (void *__ptr); extern void (*__malloc_initialize_hook) (void); extern void (*__free_hook) (void *__ptr, const void *); extern void *(*__malloc_hook) (size_t __size, const void *); extern void *(*__realloc_hook) (void *__ptr, size_t __size, const void *); extern void *(*__memalign_hook) (size_t __alignment, size_t __size, const void *); extern void (*__after_morecore_hook) (void); extern void __malloc_check_init (void); #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_MALLOC_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: time.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 30 "/usr/include/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 40 "/usr/include/time.h" #line 1 "/usr/include/bits/time.h" #line 43 "/usr/include/bits/time.h" #line 44 "/usr/include/time.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 58 "/usr/include/time.h" typedef __clock_t clock_t; typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; struct timespec { __time_t tv_sec; long int tv_nsec; }; struct tm { int tm_sec; int tm_min; int tm_hour; int tm_mday; int tm_mon; int tm_year; int tm_wday; int tm_yday; int tm_isdst; long int tm_gmtoff; const char *tm_zone; }; struct itimerspec { struct timespec it_interval; struct timespec it_value; }; struct sigevent; typedef __pid_t pid_t; extern clock_t clock (void) ; extern time_t time (time_t *__timer) ; extern double difftime (time_t __time1, time_t __time0) ; extern time_t mktime (struct tm *__tp) ; extern size_t strftime (char * __s, size_t __maxsize, const char * __format, const struct tm * __tp) ; #line 212 "/usr/include/time.h" #line 227 "/usr/include/time.h" extern struct tm *gmtime (const time_t *__timer) ; extern struct tm *localtime (const time_t *__timer) ; extern struct tm *gmtime_r (const time_t * __timer, struct tm * __tp) ; extern struct tm *localtime_r (const time_t * __timer, struct tm * __tp) ; extern char *asctime (const struct tm *__tp) ; extern char *ctime (const time_t *__timer) ; extern char *asctime_r (const struct tm * __tp, char * __buf) ; extern char *ctime_r (const time_t * __timer, char * __buf) ; extern char *__tzname[2]; extern int __daylight; extern long int __timezone; extern char *tzname[2]; extern void tzset (void) ; extern int daylight; extern long int timezone; extern int stime (const time_t *__when) ; extern time_t timegm (struct tm *__tp) ; extern time_t timelocal (struct tm *__tp) ; extern int dysize (int __year) ; extern int nanosleep (const struct timespec *__requested_time, struct timespec *__remaining); extern int clock_getres (clockid_t __clock_id, struct timespec *__res) ; extern int clock_gettime (clockid_t __clock_id, struct timespec *__tp) ; extern int clock_settime (clockid_t __clock_id, const struct timespec *__tp) ; extern int clock_nanosleep (clockid_t __clock_id, int __flags, const struct timespec *__req, struct timespec *__rem); extern int clock_getcpuclockid (pid_t __pid, clockid_t *__clock_id) ; extern int timer_create (clockid_t __clock_id, struct sigevent * __evp, timer_t * __timerid) ; extern int timer_delete (timer_t __timerid) ; extern int timer_settime (timer_t __timerid, int __flags, const struct itimerspec * __value, struct itimerspec * __ovalue) ; extern int timer_gettime (timer_t __timerid, struct itimerspec *__value) ; extern int timer_getoverrun (timer_t __timerid) ; #line 400 "/usr/include/time.h" #line 415 "/usr/include/time.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_TIME_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: Direct.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "Direct.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "Direct.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "Direct.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c".: ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: Ws2tcpip.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "Ws2tcpip.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "Ws2tcpip.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "Ws2tcpip.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c".: ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: endian.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_ENDIAN_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: ieeefp.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "ieeefp.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "ieeefp.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "ieeefp.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c".: ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: strings.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/strings.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/strings.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 30 "/usr/include/strings.h" extern int bcmp (const void *__s1, const void *__s2, size_t __n) ; extern void bcopy (const void *__src, void *__dest, size_t __n) ; extern void bzero (void *__s, size_t __n) ; extern int ffs (int __i) ; extern char *index (const char *__s, int __c) ; extern char *rindex (const char *__s, int __c) ; extern int strcasecmp (const char *__s1, const char *__s2) ; extern int strncasecmp (const char *__s1, const char *__s2, size_t __n) ; #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_STRINGS_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sched.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/sched.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 24 "/usr/include/sched.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 27 "/usr/include/sched.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 30 "/usr/include/sched.h" #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 33 "/usr/include/sched.h" #line 1 "/usr/include/bits/sched.h" #line 36 "/usr/include/bits/sched.h" #line 64 "/usr/include/bits/sched.h" struct sched_param { int __sched_priority; }; extern int clone (int (*__fn) (void *__arg), void *__child_stack, int __flags, void *__arg, ...) ; extern int unshare (int __flags) ; extern int sched_getcpu (void) ; struct __sched_param { int __sched_priority; }; typedef unsigned long int __cpu_mask; typedef struct { __cpu_mask __bits[1024 / (8 * sizeof (__cpu_mask))]; } cpu_set_t; #line 146 "/usr/include/bits/sched.h" #line 164 "/usr/include/bits/sched.h" #line 174 "/usr/include/bits/sched.h" extern int __sched_cpucount (size_t __setsize, const cpu_set_t *__setp) ; extern cpu_set_t *__sched_cpualloc (size_t __count) ; extern void __sched_cpufree (cpu_set_t *__set) ; #line 36 "/usr/include/sched.h" extern int sched_setparam (__pid_t __pid, const struct sched_param *__param) ; extern int sched_getparam (__pid_t __pid, struct sched_param *__param) ; extern int sched_setscheduler (__pid_t __pid, int __policy, const struct sched_param *__param) ; extern int sched_getscheduler (__pid_t __pid) ; extern int sched_yield (void) ; extern int sched_get_priority_max (int __algorithm) ; extern int sched_get_priority_min (int __algorithm) ; extern int sched_rr_get_interval (__pid_t __pid, struct timespec *__t) ; #line 117 "/usr/include/sched.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SCHED_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: cxxabi.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "cxxabi.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "cxxabi.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "cxxabi.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c".: ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/systeminfo.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "sys/systeminfo.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "sys/systeminfo.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "sys/systeminfo.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c".: ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: dos.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "dos.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "dos.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "dos.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c".: ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: WindowsX.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "WindowsX.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "WindowsX.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "WindowsX.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c".: ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/sysinfo.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/sys/sysinfo.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/sys/sysinfo.h" #line 1 "/usr/include/linux/kernel.h" struct sysinfo { long uptime; unsigned long loads[3]; unsigned long totalram; unsigned long freeram; unsigned long sharedram; unsigned long bufferram; unsigned long totalswap; unsigned long freeswap; unsigned short procs; unsigned short pad; unsigned long totalhigh; unsigned long freehigh; unsigned int mem_unit; char _f[20-2*sizeof(long)-sizeof(int)]; }; #line 26 "/usr/include/sys/sysinfo.h" extern int sysinfo (struct sysinfo *__info) ; extern int get_nprocs_conf (void) ; extern int get_nprocs (void) ; extern long int get_phys_pages (void) ; extern long int get_avphys_pages (void) ; #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_SYSINFO_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/wait.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/sys/wait.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/wait.h" #line 1 "/usr/include/signal.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 30 "/usr/include/signal.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 100 "/usr/include/bits/sigset.h" extern int __sigismember (const __sigset_t *, int); extern int __sigaddset (__sigset_t *, int); extern int __sigdelset (__sigset_t *, int); #line 124 "/usr/include/bits/sigset.h" #line 34 "/usr/include/signal.h" typedef __sig_atomic_t sig_atomic_t; typedef __sigset_t sigset_t; #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 58 "/usr/include/signal.h" #line 1 "/usr/include/bits/signum.h" #line 52 "/usr/include/bits/signum.h" #line 72 "/usr/include/bits/signum.h" #line 59 "/usr/include/signal.h" typedef __pid_t pid_t; typedef __uid_t uid_t; typedef void (*__sighandler_t) (int); extern __sighandler_t __sysv_signal (int __sig, __sighandler_t __handler) ; extern __sighandler_t signal (int __sig, __sighandler_t __handler) ; #line 104 "/usr/include/signal.h" #line 112 "/usr/include/signal.h" extern int kill (__pid_t __pid, int __sig) ; extern int killpg (__pid_t __pgrp, int __sig) ; extern int raise (int __sig) ; extern __sighandler_t ssignal (int __sig, __sighandler_t __handler) ; extern int gsignal (int __sig) ; extern void psignal (int __sig, const char *__s); extern int __sigpause (int __sig_or_mask, int __is_sig); #line 169 "/usr/include/signal.h" extern int sigblock (int __mask) ; extern int sigsetmask (int __mask) ; extern int siggetmask (void) ; typedef __sighandler_t sig_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 210 "/usr/include/signal.h" #line 1 "/usr/include/bits/siginfo.h" #line 1 "/usr/include/bits/wordsize.h" #line 26 "/usr/include/bits/siginfo.h" typedef union sigval { int sival_int; void *sival_ptr; } sigval_t; #line 50 "/usr/include/bits/siginfo.h" typedef struct siginfo { int si_signo; int si_errno; int si_code; union { int _pad[((128 / sizeof (int)) - 4)]; struct { __pid_t si_pid; __uid_t si_uid; } _kill; struct { int si_tid; int si_overrun; sigval_t si_sigval; } _timer; struct { __pid_t si_pid; __uid_t si_uid; sigval_t si_sigval; } _rt; struct { __pid_t si_pid; __uid_t si_uid; int si_status; __clock_t si_utime; __clock_t si_stime; } _sigchld; struct { void *si_addr; int si_trapno; } _sigfault; struct { int si_band; int si_fd; } _sigpoll; } _sifields; } siginfo_t; #line 127 "/usr/include/bits/siginfo.h" enum { SI_ASYNCNL = -60, SI_TKILL = -6, SI_SIGIO, SI_ASYNCIO, SI_MESGQ, SI_TIMER, SI_QUEUE, SI_USER, SI_KERNEL = 0x80 }; enum { ILL_ILLOPC = 1, ILL_ILLOPN, ILL_ILLADR, ILL_ILLTRP, ILL_PRVOPC, ILL_PRVREG, ILL_COPROC, ILL_BADSTK }; enum { FPE_INTDIV = 1, FPE_INTOVF, FPE_FLTDIV, FPE_FLTOVF, FPE_FLTUND, FPE_FLTRES, FPE_FLTINV, FPE_FLTSUB }; enum { SEGV_MAPERR = 1, SEGV_ACCERR }; enum { BUS_ADRALN = 1, BUS_ADRERR, BUS_OBJERR }; enum { TRAP_BRKPT = 1, TRAP_TRACE }; enum { CLD_EXITED = 1, CLD_KILLED, CLD_DUMPED, CLD_TRAPPED, CLD_STOPPED, CLD_CONTINUED }; enum { POLL_IN = 1, POLL_OUT, POLL_MSG, POLL_ERR, POLL_PRI, POLL_HUP }; enum { EMT_TAGOVF = 1 }; #line 281 "/usr/include/bits/siginfo.h" typedef struct sigevent { sigval_t sigev_value; int sigev_signo; int sigev_notify; union { int _pad[((64 / sizeof (int)) - 4)]; struct { void (*_function) (sigval_t); void *_attribute; } _sigev_thread; } _sigev_un; } sigevent_t; enum { SIGEV_SIGNAL = 0, SIGEV_NONE, SIGEV_THREAD, SIGEV_THREAD_ID = 4 }; #line 213 "/usr/include/signal.h" extern int sigemptyset (sigset_t *__set) ; extern int sigfillset (sigset_t *__set) ; extern int sigaddset (sigset_t *__set, int __signo) ; extern int sigdelset (sigset_t *__set, int __signo) ; extern int sigismember (const sigset_t *__set, int __signo) ; #line 243 "/usr/include/signal.h" #line 1 "/usr/include/bits/sigaction.h" struct sigaction { union { __sighandler_t sa_handler; void (*sa_sigaction) (int, siginfo_t *, void *); } __sigaction_handler; __sigset_t sa_mask; unsigned long sa_flags; void (*sa_restorer) (void); }; #line 66 "/usr/include/bits/sigaction.h" #line 247 "/usr/include/signal.h" extern int sigprocmask (int __how, const sigset_t * __set, sigset_t * __oset) ; extern int sigsuspend (const sigset_t *__set) ; extern int sigaction (int __sig, const struct sigaction * __act, struct sigaction * __oact) ; extern int sigpending (sigset_t *__set) ; extern int sigwait (const sigset_t * __set, int * __sig) ; extern int sigwaitinfo (const sigset_t * __set, siginfo_t * __info) ; extern int sigtimedwait (const sigset_t * __set, siginfo_t * __info, const struct timespec * __timeout) ; extern int sigqueue (__pid_t __pid, int __sig, const union sigval __val) ; extern const char *const _sys_siglist[65]; extern const char *const sys_siglist[65]; struct sigvec { __sighandler_t sv_handler; int sv_mask; int sv_flags; }; extern int sigvec (int __sig, const struct sigvec *__vec, struct sigvec *__ovec) ; #line 1 "/usr/include/bits/sigcontext.h" #line 1 "/usr/include/bits/wordsize.h" #line 24 "/usr/include/bits/sigcontext.h" #line 1 "/usr/include/stdint.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/stdint.h" #line 1 "/usr/include/bits/wchar.h" #line 28 "/usr/include/stdint.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/stdint.h" typedef signed char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char uint8_t; typedef unsigned short int uint16_t; typedef unsigned int uint32_t; typedef unsigned long int uint64_t; typedef signed char int_least8_t; typedef short int int_least16_t; typedef int int_least32_t; typedef long int int_least64_t; typedef unsigned char uint_least8_t; typedef unsigned short int uint_least16_t; typedef unsigned int uint_least32_t; typedef unsigned long int uint_least64_t; typedef signed char int_fast8_t; typedef long int int_fast16_t; typedef long int int_fast32_t; typedef long int int_fast64_t; #line 102 "/usr/include/stdint.h" typedef unsigned char uint_fast8_t; typedef unsigned long int uint_fast16_t; typedef unsigned long int uint_fast32_t; typedef unsigned long int uint_fast64_t; #line 115 "/usr/include/stdint.h" typedef long int intptr_t; typedef unsigned long int uintptr_t; #line 131 "/usr/include/stdint.h" typedef long int intmax_t; typedef unsigned long int uintmax_t; #line 143 "/usr/include/stdint.h" #line 156 "/usr/include/stdint.h" #line 205 "/usr/include/stdint.h" #line 215 "/usr/include/stdint.h" #line 226 "/usr/include/stdint.h" #line 238 "/usr/include/stdint.h" #line 259 "/usr/include/stdint.h" #line 298 "/usr/include/stdint.h" #line 308 "/usr/include/stdint.h" #line 317 "/usr/include/stdint.h" #line 25 "/usr/include/bits/sigcontext.h" #line 48 "/usr/include/bits/sigcontext.h" typedef struct { unsigned int si_float_regs [64]; unsigned long si_fsr; unsigned long si_gsr; unsigned long si_fprs; uint64_t si_xglob_regs[32]; uint32_t si_xfloat_regs[448]; uint64_t si_xasr; } __siginfo_fpu_t; struct sigcontext { char sigc_info[128]; struct { unsigned long u_regs[16]; unsigned long tstate; unsigned long tpc; unsigned long tnpc; unsigned int y; unsigned int fprs; } sigc_regs; __siginfo_fpu_t * sigc_fpu_save; uint64_t si_txar; uint64_t si_sccr; struct { void * ss_sp; int ss_flags; unsigned long ss_size; } sigc_stack; unsigned long sigc_mask; }; #line 334 "/usr/include/signal.h" extern int sigreturn (struct sigcontext *__scp) ; #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 344 "/usr/include/signal.h" extern int siginterrupt (int __sig, int __interrupt) ; #line 1 "/usr/include/bits/sigstack.h" struct sigstack { void *ss_sp; int ss_onstack; }; enum { SS_ONSTACK = 1, SS_DISABLE }; typedef struct sigaltstack { void *ss_sp; int ss_flags; size_t ss_size; } stack_t; #line 351 "/usr/include/signal.h" extern int sigstack (struct sigstack *__ss, struct sigstack *__oss) ; extern int sigaltstack (const struct sigaltstack * __ss, struct sigaltstack * __oss) ; #line 384 "/usr/include/signal.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 389 "/usr/include/signal.h" #line 1 "/usr/include/bits/sigthread.h" extern int pthread_sigmask (int __how, const __sigset_t * __newmask, __sigset_t * __oldmask); extern int pthread_kill (pthread_t __threadid, int __signo) ; #line 390 "/usr/include/signal.h" extern int __libc_current_sigrtmin (void) ; extern int __libc_current_sigrtmax (void) ; #line 32 "/usr/include/sys/wait.h" #line 1 "/usr/include/sys/resource.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/sys/resource.h" #line 1 "/usr/include/bits/resource.h" enum __rlimit_resource { RLIMIT_CPU = 0, RLIMIT_FSIZE = 1, RLIMIT_DATA = 2, RLIMIT_STACK = 3, RLIMIT_CORE = 4, __RLIMIT_RSS = 5, RLIMIT_NOFILE = 6, __RLIMIT_OFILE = RLIMIT_NOFILE, RLIMIT_AS = 9, __RLIMIT_NPROC = 7, __RLIMIT_MEMLOCK = 8, __RLIMIT_LOCKS = 10, __RLIMIT_SIGPENDING = 11, __RLIMIT_MSGQUEUE = 12, __RLIMIT_NICE = 13, __RLIMIT_RTPRIO = 14, __RLIMIT_NLIMITS = 15, __RLIM_NLIMITS = __RLIMIT_NLIMITS }; #line 135 "/usr/include/bits/resource.h" typedef __rlim_t rlim_t; #line 150 "/usr/include/bits/resource.h" struct rlimit { rlim_t rlim_cur; rlim_t rlim_max; }; #line 168 "/usr/include/bits/resource.h" enum __rusage_who { RUSAGE_SELF = 0, RUSAGE_CHILDREN = -1 }; #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 183 "/usr/include/bits/resource.h" struct rusage { struct timeval ru_utime; struct timeval ru_stime; long int ru_maxrss; long int ru_ixrss; long int ru_idrss; long int ru_isrss; long int ru_minflt; long int ru_majflt; long int ru_nswap; long int ru_inblock; long int ru_oublock; long int ru_msgsnd; long int ru_msgrcv; long int ru_nsignals; long int ru_nvcsw; long int ru_nivcsw; }; enum __priority_which { PRIO_PROCESS = 0, PRIO_PGRP = 1, PRIO_USER = 2 }; #line 26 "/usr/include/sys/resource.h" typedef __id_t id_t; typedef int __rlimit_resource_t; typedef int __rusage_who_t; typedef int __priority_which_t; extern int getrlimit (__rlimit_resource_t __resource, struct rlimit *__rlimits) ; #line 65 "/usr/include/sys/resource.h" extern int setrlimit (__rlimit_resource_t __resource, const struct rlimit *__rlimits) ; #line 85 "/usr/include/sys/resource.h" extern int getrusage (__rusage_who_t __who, struct rusage *__usage) ; extern int getpriority (__priority_which_t __which, id_t __who) ; extern int setpriority (__priority_which_t __which, id_t __who, int __prio) ; #line 33 "/usr/include/sys/wait.h" #line 1 "/usr/include/bits/waitflags.h" #line 39 "/usr/include/sys/wait.h" #line 52 "/usr/include/sys/wait.h" #line 70 "/usr/include/sys/wait.h" #line 78 "/usr/include/sys/wait.h" #line 1 "/usr/include/bits/waitstatus.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 66 "/usr/include/bits/waitstatus.h" union wait { int w_status; struct { #line 79 "/usr/include/bits/waitstatus.h" unsigned int:16; unsigned int __w_retcode:8; unsigned int __w_coredump:1; unsigned int __w_termsig:7; } __wait_terminated; struct { #line 93 "/usr/include/bits/waitstatus.h" unsigned int:16; unsigned int __w_stopsig:8; unsigned int __w_stopval:8; } __wait_stopped; }; #line 81 "/usr/include/sys/wait.h" #line 92 "/usr/include/sys/wait.h" #line 99 "/usr/include/sys/wait.h" typedef enum { P_ALL, P_PID, P_PGID } idtype_t; extern __pid_t wait (void * __stat_loc); extern __pid_t waitpid (__pid_t __pid, int *__stat_loc, int __options); #line 1 "/usr/include/bits/siginfo.h" #line 1 "/usr/include/bits/wordsize.h" #line 26 "/usr/include/bits/siginfo.h" #line 39 "/usr/include/bits/siginfo.h" #line 268 "/usr/include/bits/siginfo.h" #line 144 "/usr/include/sys/wait.h" extern int waitid (idtype_t __idtype, __id_t __id, siginfo_t *__infop, int __options); struct rusage; extern __pid_t wait3 (void * __stat_loc, int __options, struct rusage * __usage) ; extern __pid_t wait4 (__pid_t __pid, void * __stat_loc, int __options, struct rusage *__usage) ; #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_WAIT_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: stdlib.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/stdlib.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/stdlib.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef int wchar_t; #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 34 "/usr/include/stdlib.h" #line 95 "/usr/include/stdlib.h" typedef struct { int quot; int rem; } div_t; typedef struct { long int quot; long int rem; } ldiv_t; typedef struct { long long int quot; long long int rem; } lldiv_t; extern size_t __ctype_get_mb_cur_max (void) ; extern double atof (const char *__nptr) ; extern int atoi (const char *__nptr) ; extern long int atol (const char *__nptr) ; extern long long int atoll (const char *__nptr) ; extern double strtod (const char * __nptr, char ** __endptr) ; extern float strtof (const char * __nptr, char ** __endptr) ; extern long double strtold (const char * __nptr, char ** __endptr) ; extern long int strtol (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long int strtoul (const char * __nptr, char ** __endptr, int __base) ; extern long long int strtoq (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long long int strtouq (const char * __nptr, char ** __endptr, int __base) ; extern long long int strtoll (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long long int strtoull (const char * __nptr, char ** __endptr, int __base) ; #line 274 "/usr/include/stdlib.h" #line 305 "/usr/include/stdlib.h" extern char *l64a (long int __n) ; extern long int a64l (const char *__s) ; #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; typedef char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 321 "/usr/include/stdlib.h" extern long int random (void) ; extern void srandom (unsigned int __seed) ; extern char *initstate (unsigned int __seed, char *__statebuf, size_t __statelen) ; extern char *setstate (char *__statebuf) ; struct random_data { int32_t *fptr; int32_t *rptr; int32_t *state; int rand_type; int rand_deg; int rand_sep; int32_t *end_ptr; }; extern int random_r (struct random_data * __buf, int32_t * __result) ; extern int srandom_r (unsigned int __seed, struct random_data *__buf) ; extern int initstate_r (unsigned int __seed, char * __statebuf, size_t __statelen, struct random_data * __buf) ; extern int setstate_r (char * __statebuf, struct random_data * __buf) ; extern int rand (void) ; extern void srand (unsigned int __seed) ; extern int rand_r (unsigned int *__seed) ; extern double drand48 (void) ; extern double erand48 (unsigned short int __xsubi[3]) ; extern long int lrand48 (void) ; extern long int nrand48 (unsigned short int __xsubi[3]) ; extern long int mrand48 (void) ; extern long int jrand48 (unsigned short int __xsubi[3]) ; extern void srand48 (long int __seedval) ; extern unsigned short int *seed48 (unsigned short int __seed16v[3]) ; extern void lcong48 (unsigned short int __param[7]) ; struct drand48_data { unsigned short int __x[3]; unsigned short int __old_x[3]; unsigned short int __c; unsigned short int __init; unsigned long long int __a; }; extern int drand48_r (struct drand48_data * __buffer, double * __result) ; extern int erand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, double * __result) ; extern int lrand48_r (struct drand48_data * __buffer, long int * __result) ; extern int nrand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, long int * __result) ; extern int mrand48_r (struct drand48_data * __buffer, long int * __result) ; extern int jrand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, long int * __result) ; extern int srand48_r (long int __seedval, struct drand48_data *__buffer) ; extern int seed48_r (unsigned short int __seed16v[3], struct drand48_data *__buffer) ; extern int lcong48_r (unsigned short int __param[7], struct drand48_data *__buffer) ; extern void *malloc (size_t __size) ; extern void *calloc (size_t __nmemb, size_t __size) ; extern void *realloc (void *__ptr, size_t __size) ; extern void free (void *__ptr) ; extern void cfree (void *__ptr) ; #line 1 "/usr/include/alloca.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/alloca.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 26 "/usr/include/alloca.h" extern void *alloca (size_t __size) ; #line 498 "/usr/include/stdlib.h" extern void *valloc (size_t __size) ; extern int posix_memalign (void **__memptr, size_t __alignment, size_t __size) ; extern void abort (void) ; extern int atexit (void (*__func) (void)) ; extern int on_exit (void (*__func) (int __status, void *__arg), void *__arg) ; extern void exit (int __status) ; extern void _Exit (int __status) ; extern char *getenv (const char *__name) ; extern char *__secure_getenv (const char *__name) ; extern int putenv (char *__string) ; extern int setenv (const char *__name, const char *__value, int __replace) ; extern int unsetenv (const char *__name) ; extern int clearenv (void) ; extern char *mktemp (char *__template) ; extern int mkstemp (char *__template) ; #line 607 "/usr/include/stdlib.h" extern char *mkdtemp (char *__template) ; #line 638 "/usr/include/stdlib.h" extern int system (const char *__command) ; #line 655 "/usr/include/stdlib.h" extern char *realpath (const char * __name, char * __resolved) ; typedef int (*__compar_fn_t) (const void *, const void *); extern void *bsearch (const void *__key, const void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; extern void qsort (void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; extern int abs (int __x) ; extern long int labs (long int __x) ; extern long long int llabs (long long int __x) ; extern div_t div (int __numer, int __denom) ; extern ldiv_t ldiv (long int __numer, long int __denom) ; extern lldiv_t lldiv (long long int __numer, long long int __denom) ; extern char *ecvt (double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *fcvt (double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *gcvt (double __value, int __ndigit, char *__buf) ; extern char *qecvt (long double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *qfcvt (long double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *qgcvt (long double __value, int __ndigit, char *__buf) ; extern int ecvt_r (double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int fcvt_r (double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int qecvt_r (long double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int qfcvt_r (long double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int mblen (const char *__s, size_t __n) ; extern int mbtowc (wchar_t * __pwc, const char * __s, size_t __n) ; extern int wctomb (char *__s, wchar_t __wchar) ; extern size_t mbstowcs (wchar_t * __pwcs, const char * __s, size_t __n) ; extern size_t wcstombs (char * __s, const wchar_t * __pwcs, size_t __n) ; extern int rpmatch (const char *__response) ; #line 820 "/usr/include/stdlib.h" extern int posix_openpt (int __oflag) ; #line 851 "/usr/include/stdlib.h" #line 862 "/usr/include/stdlib.h" extern int getloadavg (double __loadavg[], int __nelem) ; #line 879 "/usr/include/stdlib.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_STDLIB_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: pthread.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/pthread.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 24 "/usr/include/pthread.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 25 "/usr/include/pthread.h" #line 1 "/usr/include/sched.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 24 "/usr/include/sched.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 27 "/usr/include/sched.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 30 "/usr/include/sched.h" #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 33 "/usr/include/sched.h" #line 1 "/usr/include/bits/sched.h" #line 36 "/usr/include/bits/sched.h" #line 64 "/usr/include/bits/sched.h" struct sched_param { int __sched_priority; }; extern int clone (int (*__fn) (void *__arg), void *__child_stack, int __flags, void *__arg, ...) ; extern int unshare (int __flags) ; extern int sched_getcpu (void) ; struct __sched_param { int __sched_priority; }; typedef unsigned long int __cpu_mask; typedef struct { __cpu_mask __bits[1024 / (8 * sizeof (__cpu_mask))]; } cpu_set_t; #line 146 "/usr/include/bits/sched.h" #line 164 "/usr/include/bits/sched.h" #line 174 "/usr/include/bits/sched.h" extern int __sched_cpucount (size_t __setsize, const cpu_set_t *__setp) ; extern cpu_set_t *__sched_cpualloc (size_t __count) ; extern void __sched_cpufree (cpu_set_t *__set) ; #line 36 "/usr/include/sched.h" extern int sched_setparam (__pid_t __pid, const struct sched_param *__param) ; extern int sched_getparam (__pid_t __pid, struct sched_param *__param) ; extern int sched_setscheduler (__pid_t __pid, int __policy, const struct sched_param *__param) ; extern int sched_getscheduler (__pid_t __pid) ; extern int sched_yield (void) ; extern int sched_get_priority_max (int __algorithm) ; extern int sched_get_priority_min (int __algorithm) ; extern int sched_rr_get_interval (__pid_t __pid, struct timespec *__t) ; #line 117 "/usr/include/sched.h" #line 26 "/usr/include/pthread.h" #line 1 "/usr/include/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 30 "/usr/include/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 40 "/usr/include/time.h" #line 1 "/usr/include/bits/time.h" #line 43 "/usr/include/bits/time.h" #line 44 "/usr/include/time.h" typedef __clock_t clock_t; typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" struct tm { int tm_sec; int tm_min; int tm_hour; int tm_mday; int tm_mon; int tm_year; int tm_wday; int tm_yday; int tm_isdst; long int tm_gmtoff; const char *tm_zone; }; struct itimerspec { struct timespec it_interval; struct timespec it_value; }; struct sigevent; typedef __pid_t pid_t; extern clock_t clock (void) ; extern time_t time (time_t *__timer) ; extern double difftime (time_t __time1, time_t __time0) ; extern time_t mktime (struct tm *__tp) ; extern size_t strftime (char * __s, size_t __maxsize, const char * __format, const struct tm * __tp) ; #line 212 "/usr/include/time.h" #line 227 "/usr/include/time.h" extern struct tm *gmtime (const time_t *__timer) ; extern struct tm *localtime (const time_t *__timer) ; extern struct tm *gmtime_r (const time_t * __timer, struct tm * __tp) ; extern struct tm *localtime_r (const time_t * __timer, struct tm * __tp) ; extern char *asctime (const struct tm *__tp) ; extern char *ctime (const time_t *__timer) ; extern char *asctime_r (const struct tm * __tp, char * __buf) ; extern char *ctime_r (const time_t * __timer, char * __buf) ; extern char *__tzname[2]; extern int __daylight; extern long int __timezone; extern char *tzname[2]; extern void tzset (void) ; extern int daylight; extern long int timezone; extern int stime (const time_t *__when) ; extern time_t timegm (struct tm *__tp) ; extern time_t timelocal (struct tm *__tp) ; extern int dysize (int __year) ; extern int nanosleep (const struct timespec *__requested_time, struct timespec *__remaining); extern int clock_getres (clockid_t __clock_id, struct timespec *__res) ; extern int clock_gettime (clockid_t __clock_id, struct timespec *__tp) ; extern int clock_settime (clockid_t __clock_id, const struct timespec *__tp) ; extern int clock_nanosleep (clockid_t __clock_id, int __flags, const struct timespec *__req, struct timespec *__rem); extern int clock_getcpuclockid (pid_t __pid, clockid_t *__clock_id) ; extern int timer_create (clockid_t __clock_id, struct sigevent * __evp, timer_t * __timerid) ; extern int timer_delete (timer_t __timerid) ; extern int timer_settime (timer_t __timerid, int __flags, const struct itimerspec * __value, struct itimerspec * __ovalue) ; extern int timer_gettime (timer_t __timerid, struct itimerspec *__value) ; extern int timer_getoverrun (timer_t __timerid) ; #line 400 "/usr/include/time.h" #line 415 "/usr/include/time.h" #line 27 "/usr/include/pthread.h" #line 1 "/usr/include/signal.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 30 "/usr/include/signal.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 34 "/usr/include/signal.h" #line 46 "/usr/include/signal.h" typedef __sigset_t sigset_t; #line 401 "/usr/include/signal.h" #line 30 "/usr/include/pthread.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 31 "/usr/include/pthread.h" #line 1 "/usr/include/bits/setjmp.h" #line 1 "/usr/include/bits/wordsize.h" #line 28 "/usr/include/bits/setjmp.h" typedef struct __sparc64_jmp_buf { struct __sparc64_jmp_buf *uc_link; unsigned long uc_flags; unsigned long uc_sigmask; struct __sparc64_jmp_buf_mcontext { unsigned long mc_gregs[53]; unsigned long mc_fp; unsigned long mc_i7; struct __sparc64_jmp_buf_fpu { union { unsigned int sregs[512]; unsigned long dregs[256]; long double qregs[128]; } mcfpu_fpregs; unsigned long mcfpu_fsr; unsigned long mcfpu_fprs; unsigned long mcfpu_gsr; unsigned long mcfpu_xasr; void *mcfpu_fq; unsigned char mcfpu_qcnt; unsigned char mcfpu_qentsz; unsigned char mcfpu_enab; } mc_fpregs; } uc_mcontext; } __jmp_buf[1]; #line 70 "/usr/include/bits/setjmp.h" #line 32 "/usr/include/pthread.h" #line 1 "/usr/include/bits/wordsize.h" #line 33 "/usr/include/pthread.h" enum { PTHREAD_CREATE_JOINABLE, PTHREAD_CREATE_DETACHED }; enum { PTHREAD_MUTEX_TIMED_NP, PTHREAD_MUTEX_RECURSIVE_NP, PTHREAD_MUTEX_ERRORCHECK_NP, PTHREAD_MUTEX_ADAPTIVE_NP #line 63 "/usr/include/pthread.h" }; #line 74 "/usr/include/pthread.h" #line 85 "/usr/include/pthread.h" #line 111 "/usr/include/pthread.h" enum { PTHREAD_RWLOCK_PREFER_READER_NP, PTHREAD_RWLOCK_PREFER_WRITER_NP, PTHREAD_RWLOCK_PREFER_WRITER_NONRECURSIVE_NP, PTHREAD_RWLOCK_DEFAULT_NP = PTHREAD_RWLOCK_PREFER_READER_NP }; #line 144 "/usr/include/pthread.h" enum { PTHREAD_INHERIT_SCHED, PTHREAD_EXPLICIT_SCHED }; enum { PTHREAD_SCOPE_SYSTEM, PTHREAD_SCOPE_PROCESS }; enum { PTHREAD_PROCESS_PRIVATE, PTHREAD_PROCESS_SHARED }; struct _pthread_cleanup_buffer { void (*__routine) (void *); void *__arg; int __canceltype; struct _pthread_cleanup_buffer *__prev; }; enum { PTHREAD_CANCEL_ENABLE, PTHREAD_CANCEL_DISABLE }; enum { PTHREAD_CANCEL_DEFERRED, PTHREAD_CANCEL_ASYNCHRONOUS }; extern int pthread_create (pthread_t * __newthread, const pthread_attr_t * __attr, void *(*__start_routine) (void *), void * __arg) ; extern void pthread_exit (void *__retval) ; extern int pthread_join (pthread_t __th, void **__thread_return); #line 258 "/usr/include/pthread.h" extern int pthread_detach (pthread_t __th) ; extern pthread_t pthread_self (void) ; extern int pthread_equal (pthread_t __thread1, pthread_t __thread2) ; extern int pthread_attr_init (pthread_attr_t *__attr) ; extern int pthread_attr_destroy (pthread_attr_t *__attr) ; extern int pthread_attr_getdetachstate (const pthread_attr_t *__attr, int *__detachstate) ; extern int pthread_attr_setdetachstate (pthread_attr_t *__attr, int __detachstate) ; extern int pthread_attr_getguardsize (const pthread_attr_t *__attr, size_t *__guardsize) ; extern int pthread_attr_setguardsize (pthread_attr_t *__attr, size_t __guardsize) ; extern int pthread_attr_getschedparam (const pthread_attr_t * __attr, struct sched_param * __param) ; extern int pthread_attr_setschedparam (pthread_attr_t * __attr, const struct sched_param * __param) ; extern int pthread_attr_getschedpolicy (const pthread_attr_t * __attr, int * __policy) ; extern int pthread_attr_setschedpolicy (pthread_attr_t *__attr, int __policy) ; extern int pthread_attr_getinheritsched (const pthread_attr_t * __attr, int * __inherit) ; extern int pthread_attr_setinheritsched (pthread_attr_t *__attr, int __inherit) ; extern int pthread_attr_getscope (const pthread_attr_t * __attr, int * __scope) ; extern int pthread_attr_setscope (pthread_attr_t *__attr, int __scope) ; extern int pthread_attr_getstackaddr (const pthread_attr_t * __attr, void ** __stackaddr) ; extern int pthread_attr_setstackaddr (pthread_attr_t *__attr, void *__stackaddr) ; extern int pthread_attr_getstacksize (const pthread_attr_t * __attr, size_t * __stacksize) ; extern int pthread_attr_setstacksize (pthread_attr_t *__attr, size_t __stacksize) ; extern int pthread_attr_getstack (const pthread_attr_t * __attr, void ** __stackaddr, size_t * __stacksize) ; extern int pthread_attr_setstack (pthread_attr_t *__attr, void *__stackaddr, size_t __stacksize) ; #line 407 "/usr/include/pthread.h" extern int pthread_setschedparam (pthread_t __target_thread, int __policy, const struct sched_param *__param) ; extern int pthread_getschedparam (pthread_t __target_thread, int * __policy, struct sched_param * __param) ; extern int pthread_setschedprio (pthread_t __target_thread, int __prio) ; #line 435 "/usr/include/pthread.h" #line 455 "/usr/include/pthread.h" extern int pthread_once (pthread_once_t *__once_control, void (*__init_routine) (void)) ; extern int pthread_setcancelstate (int __state, int *__oldstate); extern int pthread_setcanceltype (int __type, int *__oldtype); extern int pthread_cancel (pthread_t __th); extern void pthread_testcancel (void); typedef struct { struct { __jmp_buf __cancel_jmp_buf; int __mask_was_saved; } __cancel_jmp_buf[1]; void *__pad[4]; } __pthread_unwind_buf_t ; struct __pthread_cleanup_frame { void (*__cancel_routine) (void *); void *__cancel_arg; int __do_it; int __cancel_type; }; #line 629 "/usr/include/pthread.h" #line 652 "/usr/include/pthread.h" extern void __pthread_register_cancel (__pthread_unwind_buf_t *__buf) ; #line 663 "/usr/include/pthread.h" extern void __pthread_unregister_cancel (__pthread_unwind_buf_t *__buf) ; #line 701 "/usr/include/pthread.h" extern void __pthread_unwind_next (__pthread_unwind_buf_t *__buf) ; struct __jmp_buf_tag; extern int __sigsetjmp (struct __jmp_buf_tag *__env, int __savemask) ; extern int pthread_mutex_init (pthread_mutex_t *__mutex, const pthread_mutexattr_t *__mutexattr) ; extern int pthread_mutex_destroy (pthread_mutex_t *__mutex) ; extern int pthread_mutex_trylock (pthread_mutex_t *__mutex) ; extern int pthread_mutex_lock (pthread_mutex_t *__mutex) ; extern int pthread_mutex_timedlock (pthread_mutex_t * __mutex, const struct timespec * __abstime) ; extern int pthread_mutex_unlock (pthread_mutex_t *__mutex) ; #line 761 "/usr/include/pthread.h" extern int pthread_mutexattr_init (pthread_mutexattr_t *__attr) ; extern int pthread_mutexattr_destroy (pthread_mutexattr_t *__attr) ; extern int pthread_mutexattr_getpshared (const pthread_mutexattr_t * __attr, int * __pshared) ; extern int pthread_mutexattr_setpshared (pthread_mutexattr_t *__attr, int __pshared) ; #line 827 "/usr/include/pthread.h" #line 839 "/usr/include/pthread.h" extern int pthread_rwlock_init (pthread_rwlock_t * __rwlock, const pthread_rwlockattr_t * __attr) ; extern int pthread_rwlock_destroy (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlock_rdlock (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlock_tryrdlock (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlock_timedrdlock (pthread_rwlock_t * __rwlock, const struct timespec * __abstime) ; extern int pthread_rwlock_wrlock (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlock_trywrlock (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlock_timedwrlock (pthread_rwlock_t * __rwlock, const struct timespec * __abstime) ; extern int pthread_rwlock_unlock (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlockattr_init (pthread_rwlockattr_t *__attr) ; extern int pthread_rwlockattr_destroy (pthread_rwlockattr_t *__attr) ; extern int pthread_rwlockattr_getpshared (const pthread_rwlockattr_t * __attr, int * __pshared) ; extern int pthread_rwlockattr_setpshared (pthread_rwlockattr_t *__attr, int __pshared) ; extern int pthread_rwlockattr_getkind_np (const pthread_rwlockattr_t * __attr, int * __pref) ; extern int pthread_rwlockattr_setkind_np (pthread_rwlockattr_t *__attr, int __pref) ; extern int pthread_cond_init (pthread_cond_t * __cond, const pthread_condattr_t * __cond_attr) ; extern int pthread_cond_destroy (pthread_cond_t *__cond) ; extern int pthread_cond_signal (pthread_cond_t *__cond) ; extern int pthread_cond_broadcast (pthread_cond_t *__cond) ; extern int pthread_cond_wait (pthread_cond_t * __cond, pthread_mutex_t * __mutex) ; extern int pthread_cond_timedwait (pthread_cond_t * __cond, pthread_mutex_t * __mutex, const struct timespec * __abstime) ; extern int pthread_condattr_init (pthread_condattr_t *__attr) ; extern int pthread_condattr_destroy (pthread_condattr_t *__attr) ; extern int pthread_condattr_getpshared (const pthread_condattr_t * __attr, int * __pshared) ; extern int pthread_condattr_setpshared (pthread_condattr_t *__attr, int __pshared) ; extern int pthread_condattr_getclock (const pthread_condattr_t * __attr, __clockid_t * __clock_id) ; extern int pthread_condattr_setclock (pthread_condattr_t *__attr, __clockid_t __clock_id) ; extern int pthread_spin_init (pthread_spinlock_t *__lock, int __pshared) ; extern int pthread_spin_destroy (pthread_spinlock_t *__lock) ; extern int pthread_spin_lock (pthread_spinlock_t *__lock) ; extern int pthread_spin_trylock (pthread_spinlock_t *__lock) ; extern int pthread_spin_unlock (pthread_spinlock_t *__lock) ; extern int pthread_barrier_init (pthread_barrier_t * __barrier, const pthread_barrierattr_t * __attr, unsigned int __count) ; extern int pthread_barrier_destroy (pthread_barrier_t *__barrier) ; extern int pthread_barrier_wait (pthread_barrier_t *__barrier) ; extern int pthread_barrierattr_init (pthread_barrierattr_t *__attr) ; extern int pthread_barrierattr_destroy (pthread_barrierattr_t *__attr) ; extern int pthread_barrierattr_getpshared (const pthread_barrierattr_t * __attr, int * __pshared) ; extern int pthread_barrierattr_setpshared (pthread_barrierattr_t *__attr, int __pshared) ; extern int pthread_key_create (pthread_key_t *__key, void (*__destr_function) (void *)) ; extern int pthread_key_delete (pthread_key_t __key) ; extern void *pthread_getspecific (pthread_key_t __key) ; extern int pthread_setspecific (pthread_key_t __key, const void *__pointer) ; extern int pthread_getcpuclockid (pthread_t __thread_id, __clockid_t *__clock_id) ; extern int pthread_atfork (void (*__prepare) (void), void (*__parent) (void), void (*__child) (void)) ; #line 1116 "/usr/include/pthread.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_PTHREAD_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: setjmp.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/setjmp.h" #line 1 "/usr/include/setjmp.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/setjmp.h" #line 1 "/usr/include/bits/setjmp.h" #line 1 "/usr/include/bits/wordsize.h" #line 28 "/usr/include/bits/setjmp.h" typedef struct __sparc64_jmp_buf { struct __sparc64_jmp_buf *uc_link; unsigned long uc_flags; unsigned long uc_sigmask; struct __sparc64_jmp_buf_mcontext { unsigned long mc_gregs[53]; unsigned long mc_fp; unsigned long mc_i7; struct __sparc64_jmp_buf_fpu { union { unsigned int sregs[512]; unsigned long dregs[256]; long double qregs[128]; } mcfpu_fpregs; unsigned long mcfpu_fsr; unsigned long mcfpu_fprs; unsigned long mcfpu_gsr; unsigned long mcfpu_xasr; void *mcfpu_fq; unsigned char mcfpu_qcnt; unsigned char mcfpu_qentsz; unsigned char mcfpu_enab; } mc_fpregs; } uc_mcontext; } __jmp_buf[1]; #line 70 "/usr/include/bits/setjmp.h" #line 31 "/usr/include/setjmp.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 32 "/usr/include/setjmp.h" struct __jmp_buf_tag { __jmp_buf __jmpbuf; int __mask_was_saved; __sigset_t __saved_mask; }; typedef struct __jmp_buf_tag jmp_buf[1]; extern int setjmp (jmp_buf __env) ; extern int __sigsetjmp (struct __jmp_buf_tag __env[1], int __savemask) ; extern int _setjmp (struct __jmp_buf_tag __env[1]) ; #line 76 "/usr/include/setjmp.h" extern void longjmp (struct __jmp_buf_tag __env[1], int __val) ; extern void _longjmp (struct __jmp_buf_tag __env[1], int __val) ; typedef struct __jmp_buf_tag sigjmp_buf[1]; extern void siglongjmp (sigjmp_buf __env, int __val) ; #line 3 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/setjmp.h" #pragma unknown_control_flow(setjmp) #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(sigsetjmp) #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SETJMP_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/utsname.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/sys/utsname.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/sys/utsname.h" #line 1 "/usr/include/bits/utsname.h" #line 31 "/usr/include/sys/utsname.h" #line 47 "/usr/include/sys/utsname.h" struct utsname { char sysname[65]; char nodename[65]; char release[65]; char version[65]; char machine[65]; char __domainname[65]; }; extern int uname (struct utsname *__name) ; #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_UTSNAME_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: machine/endian.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "machine/endian.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "machine/endian.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "machine/endian.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c".: ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: limits.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 7 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "/usr/include/bits/posix1_lim.h" #line 1 "/usr/include/bits/local_lim.h" #line 34 "/usr/include/bits/local_lim.h" #line 1 "/usr/include/linux/limits.h" #line 17 "/usr/include/linux/limits.h" #line 37 "/usr/include/bits/local_lim.h" #line 154 "/usr/include/bits/posix1_lim.h" #line 62 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "/usr/include/bits/posix2_lim.h" #line 87 "/usr/include/bits/posix2_lim.h" #line 66 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_LIMITS_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: fcntl.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/fcntl.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/fcntl.h" #line 1 "/usr/include/bits/fcntl.h" #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; typedef char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 26 "/usr/include/bits/fcntl.h" #line 1 "/usr/include/bits/wordsize.h" #line 27 "/usr/include/bits/fcntl.h" #line 46 "/usr/include/bits/fcntl.h" #line 54 "/usr/include/bits/fcntl.h" #line 62 "/usr/include/bits/fcntl.h" #line 98 "/usr/include/bits/fcntl.h" #line 111 "/usr/include/bits/fcntl.h" #line 121 "/usr/include/bits/fcntl.h" #line 142 "/usr/include/bits/fcntl.h" #line 149 "/usr/include/bits/fcntl.h" #line 160 "/usr/include/bits/fcntl.h" struct flock { short int l_type; short int l_whence; __off_t l_start; __off_t l_len; __pid_t l_pid; short int __unused; }; #line 187 "/usr/include/bits/fcntl.h" #line 197 "/usr/include/bits/fcntl.h" #line 207 "/usr/include/bits/fcntl.h" #line 229 "/usr/include/bits/fcntl.h" #line 258 "/usr/include/bits/fcntl.h" #line 35 "/usr/include/fcntl.h" #line 51 "/usr/include/fcntl.h" #line 70 "/usr/include/fcntl.h" extern int fcntl (int __fd, int __cmd, ...); extern int open (const char *__file, int __oflag, ...) ; #line 97 "/usr/include/fcntl.h" #line 123 "/usr/include/fcntl.h" extern int creat (const char *__file, __mode_t __mode) ; #line 142 "/usr/include/fcntl.h" extern int lockf (int __fd, int __cmd, __off_t __len); #line 171 "/usr/include/fcntl.h" extern int posix_fadvise (int __fd, __off_t __offset, __off_t __len, int __advise) ; #line 191 "/usr/include/fcntl.h" extern int posix_fallocate (int __fd, __off_t __offset, __off_t __len); #line 212 "/usr/include/fcntl.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_FCNTL_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: string.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/string.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/string.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 34 "/usr/include/string.h" extern void *memcpy (void * __dest, const void * __src, size_t __n) ; extern void *memmove (void *__dest, const void *__src, size_t __n) ; extern void *memccpy (void * __dest, const void * __src, int __c, size_t __n) ; extern void *memset (void *__s, int __c, size_t __n) ; extern int memcmp (const void *__s1, const void *__s2, size_t __n) ; extern void *memchr (const void *__s, int __c, size_t __n) ; #line 80 "/usr/include/string.h" extern char *strcpy (char * __dest, const char * __src) ; extern char *strncpy (char * __dest, const char * __src, size_t __n) ; extern char *strcat (char * __dest, const char * __src) ; extern char *strncat (char * __dest, const char * __src, size_t __n) ; extern int strcmp (const char *__s1, const char *__s2) ; extern int strncmp (const char *__s1, const char *__s2, size_t __n) ; extern int strcoll (const char *__s1, const char *__s2) ; extern size_t strxfrm (char * __dest, const char * __src, size_t __n) ; #line 127 "/usr/include/string.h" extern char *strdup (const char *__s) ; #line 164 "/usr/include/string.h" extern char *strchr (const char *__s, int __c) ; extern char *strrchr (const char *__s, int __c) ; #line 180 "/usr/include/string.h" extern size_t strcspn (const char *__s, const char *__reject) ; extern size_t strspn (const char *__s, const char *__accept) ; extern char *strpbrk (const char *__s, const char *__accept) ; extern char *strstr (const char *__haystack, const char *__needle) ; extern char *strtok (char * __s, const char * __delim) ; extern char *__strtok_r (char * __s, const char * __delim, char ** __save_ptr) ; extern char *strtok_r (char * __s, const char * __delim, char ** __save_ptr) ; #line 238 "/usr/include/string.h" extern size_t strlen (const char *__s) ; #line 252 "/usr/include/string.h" extern char *strerror (int __errnum) ; extern int __xpg_strerror_r (int __errnum, char *__buf, size_t __buflen) ; #line 285 "/usr/include/string.h" extern void __bzero (void *__s, size_t __n) ; extern void bcopy (const void *__src, void *__dest, size_t __n) ; extern void bzero (void *__s, size_t __n) ; extern int bcmp (const void *__s1, const void *__s2, size_t __n) ; extern char *index (const char *__s, int __c) ; extern char *rindex (const char *__s, int __c) ; extern int ffs (int __i) ; #line 329 "/usr/include/string.h" extern int strcasecmp (const char *__s1, const char *__s2) ; extern int strncasecmp (const char *__s1, const char *__s2, size_t __n) ; #line 350 "/usr/include/string.h" extern char *strsep (char ** __stringp, const char * __delim) ; #line 396 "/usr/include/string.h" #line 431 "/usr/include/string.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_STRING_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/times.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/sys/times.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/sys/times.h" #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 58 "/usr/include/time.h" typedef __clock_t clock_t; #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 30 "/usr/include/sys/times.h" struct tms { clock_t tms_utime; clock_t tms_stime; clock_t tms_cutime; clock_t tms_cstime; }; extern clock_t times (struct tms *__buffer) ; #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_TIMES_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: io.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "io.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "io.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "io.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c".: ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: stdint.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/stdint.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/stdint.h" #line 1 "/usr/include/bits/wchar.h" #line 28 "/usr/include/stdint.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/stdint.h" typedef signed char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char uint8_t; typedef unsigned short int uint16_t; typedef unsigned int uint32_t; typedef unsigned long int uint64_t; typedef signed char int_least8_t; typedef short int int_least16_t; typedef int int_least32_t; typedef long int int_least64_t; typedef unsigned char uint_least8_t; typedef unsigned short int uint_least16_t; typedef unsigned int uint_least32_t; typedef unsigned long int uint_least64_t; typedef signed char int_fast8_t; typedef long int int_fast16_t; typedef long int int_fast32_t; typedef long int int_fast64_t; #line 102 "/usr/include/stdint.h" typedef unsigned char uint_fast8_t; typedef unsigned long int uint_fast16_t; typedef unsigned long int uint_fast32_t; typedef unsigned long int uint_fast64_t; #line 115 "/usr/include/stdint.h" typedef long int intptr_t; typedef unsigned long int uintptr_t; #line 131 "/usr/include/stdint.h" typedef long int intmax_t; typedef unsigned long int uintmax_t; #line 143 "/usr/include/stdint.h" #line 156 "/usr/include/stdint.h" #line 205 "/usr/include/stdint.h" #line 215 "/usr/include/stdint.h" #line 226 "/usr/include/stdint.h" #line 238 "/usr/include/stdint.h" #line 259 "/usr/include/stdint.h" #line 298 "/usr/include/stdint.h" #line 308 "/usr/include/stdint.h" #line 317 "/usr/include/stdint.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_STDINT_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: pwd.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/pwd.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/pwd.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 31 "/usr/include/pwd.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 34 "/usr/include/pwd.h" typedef __gid_t gid_t; typedef __uid_t uid_t; struct passwd { char *pw_name; char *pw_passwd; __uid_t pw_uid; __gid_t pw_gid; char *pw_gecos; char *pw_dir; char *pw_shell; }; #line 1 "/usr/include/stdio.h" #line 40 "/usr/include/stdio.h" struct _IO_FILE; typedef struct _IO_FILE FILE; #line 70 "/usr/include/stdio.h" #line 917 "/usr/include/stdio.h" #line 65 "/usr/include/pwd.h" extern void setpwent (void); extern void endpwent (void); extern struct passwd *getpwent (void); extern struct passwd *fgetpwent (FILE *__stream); extern int putpwent (const struct passwd * __p, FILE * __f); extern struct passwd *getpwuid (__uid_t __uid); extern struct passwd *getpwnam (const char *__name); extern int getpwent_r (struct passwd * __resultbuf, char * __buffer, size_t __buflen, struct passwd ** __result); extern int getpwuid_r (__uid_t __uid, struct passwd * __resultbuf, char * __buffer, size_t __buflen, struct passwd ** __result); extern int getpwnam_r (const char * __name, struct passwd * __resultbuf, char * __buffer, size_t __buflen, struct passwd ** __result); extern int fgetpwent_r (FILE * __stream, struct passwd * __resultbuf, char * __buffer, size_t __buflen, struct passwd ** __result); #line 183 "/usr/include/pwd.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_PWD_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: float.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/float.h" #line 65 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/float.h" #line 80 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/float.h" #line 91 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/float.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_FLOAT_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/param.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/sys/param.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 7 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "/usr/include/bits/posix1_lim.h" #line 1 "/usr/include/bits/local_lim.h" #line 34 "/usr/include/bits/local_lim.h" #line 1 "/usr/include/linux/limits.h" #line 17 "/usr/include/linux/limits.h" #line 37 "/usr/include/bits/local_lim.h" #line 154 "/usr/include/bits/posix1_lim.h" #line 62 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "/usr/include/bits/posix2_lim.h" #line 87 "/usr/include/bits/posix2_lim.h" #line 66 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 23 "/usr/include/sys/param.h" #line 1 "/usr/include/linux/param.h" #line 1 "/usr/include/asm/param.h" #line 1 "/usr/include/asm-s64fx/param.h" #line 6 "/usr/include/asm/param.h" #line 5 "/usr/include/linux/param.h" #line 25 "/usr/include/sys/param.h" #line 36 "/usr/include/sys/param.h" #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; typedef char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 43 "/usr/include/sys/param.h" #line 62 "/usr/include/sys/param.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_PARAM_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: netdb.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/netdb.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/netdb.h" #line 1 "/usr/include/netinet/in.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 24 "/usr/include/netinet/in.h" #line 1 "/usr/include/stdint.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/stdint.h" #line 1 "/usr/include/bits/wchar.h" #line 28 "/usr/include/stdint.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/stdint.h" typedef signed char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char uint8_t; typedef unsigned short int uint16_t; typedef unsigned int uint32_t; typedef unsigned long int uint64_t; typedef signed char int_least8_t; typedef short int int_least16_t; typedef int int_least32_t; typedef long int int_least64_t; typedef unsigned char uint_least8_t; typedef unsigned short int uint_least16_t; typedef unsigned int uint_least32_t; typedef unsigned long int uint_least64_t; typedef signed char int_fast8_t; typedef long int int_fast16_t; typedef long int int_fast32_t; typedef long int int_fast64_t; #line 102 "/usr/include/stdint.h" typedef unsigned char uint_fast8_t; typedef unsigned long int uint_fast16_t; typedef unsigned long int uint_fast32_t; typedef unsigned long int uint_fast64_t; #line 115 "/usr/include/stdint.h" typedef long int intptr_t; typedef unsigned long int uintptr_t; #line 131 "/usr/include/stdint.h" typedef long int intmax_t; typedef unsigned long int uintmax_t; #line 143 "/usr/include/stdint.h" #line 156 "/usr/include/stdint.h" #line 205 "/usr/include/stdint.h" #line 215 "/usr/include/stdint.h" #line 226 "/usr/include/stdint.h" #line 238 "/usr/include/stdint.h" #line 259 "/usr/include/stdint.h" #line 298 "/usr/include/stdint.h" #line 308 "/usr/include/stdint.h" #line 317 "/usr/include/stdint.h" #line 25 "/usr/include/netinet/in.h" #line 1 "/usr/include/sys/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/socket.h" #line 1 "/usr/include/sys/uio.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/sys/uio.h" #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; #line 172 "/usr/include/sys/types.h" typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 25 "/usr/include/sys/uio.h" #line 1 "/usr/include/bits/uio.h" struct iovec { void *iov_base; size_t iov_len; }; #line 30 "/usr/include/sys/uio.h" extern ssize_t readv (int __fd, const struct iovec *__iovec, int __count); extern ssize_t writev (int __fd, const struct iovec *__iovec, int __count); #line 29 "/usr/include/sys/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 31 "/usr/include/sys/socket.h" #line 1 "/usr/include/bits/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 31 "/usr/include/bits/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 7 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "/usr/include/bits/posix1_lim.h" #line 1 "/usr/include/bits/local_lim.h" #line 34 "/usr/include/bits/local_lim.h" #line 1 "/usr/include/linux/limits.h" #line 17 "/usr/include/linux/limits.h" #line 37 "/usr/include/bits/local_lim.h" #line 154 "/usr/include/bits/posix1_lim.h" #line 62 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "/usr/include/bits/posix2_lim.h" #line 87 "/usr/include/bits/posix2_lim.h" #line 66 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 33 "/usr/include/bits/socket.h" typedef __socklen_t socklen_t; enum __socket_type { SOCK_STREAM = 1, SOCK_DGRAM = 2, SOCK_RAW = 3, SOCK_RDM = 4, SOCK_SEQPACKET = 5, SOCK_PACKET = 10 }; #line 96 "/usr/include/bits/socket.h" #line 130 "/usr/include/bits/socket.h" #line 142 "/usr/include/bits/socket.h" #line 1 "/usr/include/bits/sockaddr.h" typedef unsigned short int sa_family_t; #line 148 "/usr/include/bits/socket.h" struct sockaddr { sa_family_t sa_family; char sa_data[14]; }; #line 166 "/usr/include/bits/socket.h" struct sockaddr_storage { sa_family_t ss_family; __uint64_t __ss_align; char __ss_padding[(128 - (2 * sizeof (__uint64_t)))]; }; enum { MSG_OOB = 0x01, MSG_PEEK = 0x02, MSG_DONTROUTE = 0x04, #line 189 "/usr/include/bits/socket.h" MSG_CTRUNC = 0x08, MSG_PROXY = 0x10, MSG_TRUNC = 0x20, MSG_DONTWAIT = 0x40, MSG_EOR = 0x80, MSG_WAITALL = 0x100, MSG_FIN = 0x200, MSG_SYN = 0x400, MSG_CONFIRM = 0x800, MSG_RST = 0x1000, MSG_ERRQUEUE = 0x2000, MSG_NOSIGNAL = 0x4000, MSG_MORE = 0x8000, MSG_CMSG_CLOEXEC = 0x40000000 }; struct msghdr { void *msg_name; socklen_t msg_namelen; struct iovec *msg_iov; size_t msg_iovlen; void *msg_control; size_t msg_controllen; int msg_flags; }; struct cmsghdr { size_t cmsg_len; int cmsg_level; int cmsg_type; unsigned char __cmsg_data []; }; #line 272 "/usr/include/bits/socket.h" extern struct cmsghdr *__cmsg_nxthdr (struct msghdr *__mhdr, struct cmsghdr *__cmsg) ; #line 297 "/usr/include/bits/socket.h" enum { SCM_RIGHTS = 0x01 , SCM_CREDENTIALS = 0x02 }; struct ucred { pid_t pid; uid_t uid; gid_t gid; }; #line 1 "/usr/include/asm/socket.h" #line 1 "/usr/include/asm-s64fx/socket.h" #line 1 "/usr/include/asm/sockios.h" #line 1 "/usr/include/asm-s64fx/sockios.h" #line 12 "/usr/include/asm-s64fx/sockios.h" #line 6 "/usr/include/asm/sockios.h" #line 6 "/usr/include/asm-s64fx/socket.h" #line 19 "/usr/include/asm-s64fx/socket.h" #line 26 "/usr/include/asm-s64fx/socket.h" #line 36 "/usr/include/asm-s64fx/socket.h" #line 6 "/usr/include/asm/socket.h" #line 321 "/usr/include/bits/socket.h" struct linger { int l_onoff; int l_linger; }; #line 37 "/usr/include/sys/socket.h" struct osockaddr { unsigned short int sa_family; unsigned char sa_data[14]; }; enum { SHUT_RD = 0, SHUT_WR, SHUT_RDWR }; #line 96 "/usr/include/sys/socket.h" extern int socket (int __domain, int __type, int __protocol) ; extern int socketpair (int __domain, int __type, int __protocol, int __fds[2]) ; extern int bind (int __fd, const struct sockaddr * __addr, socklen_t __len) ; extern int getsockname (int __fd, struct sockaddr * __addr, socklen_t * __len) ; extern int connect (int __fd, const struct sockaddr * __addr, socklen_t __len); extern int getpeername (int __fd, struct sockaddr * __addr, socklen_t * __len) ; extern ssize_t send (int __fd, const void *__buf, size_t __n, int __flags); extern ssize_t recv (int __fd, void *__buf, size_t __n, int __flags); extern ssize_t sendto (int __fd, const void *__buf, size_t __n, int __flags, const struct sockaddr * __addr, socklen_t __addr_len); extern ssize_t recvfrom (int __fd, void * __buf, size_t __n, int __flags, struct sockaddr * __addr, socklen_t * __addr_len); extern ssize_t sendmsg (int __fd, const struct msghdr *__message, int __flags); extern ssize_t recvmsg (int __fd, struct msghdr *__message, int __flags); extern int getsockopt (int __fd, int __level, int __optname, void * __optval, socklen_t * __optlen) ; extern int setsockopt (int __fd, int __level, int __optname, const void *__optval, socklen_t __optlen) ; extern int listen (int __fd, int __n) ; extern int accept (int __fd, struct sockaddr * __addr, socklen_t * __addr_len); extern int shutdown (int __fd, int __how) ; extern int sockatmark (int __fd) ; extern int isfdtype (int __fd, int __fdtype) ; #line 26 "/usr/include/netinet/in.h" enum { IPPROTO_IP = 0, IPPROTO_HOPOPTS = 0, IPPROTO_ICMP = 1, IPPROTO_IGMP = 2, IPPROTO_IPIP = 4, IPPROTO_TCP = 6, IPPROTO_EGP = 8, IPPROTO_PUP = 12, IPPROTO_UDP = 17, IPPROTO_IDP = 22, IPPROTO_TP = 29, IPPROTO_IPV6 = 41, IPPROTO_ROUTING = 43, IPPROTO_FRAGMENT = 44, IPPROTO_RSVP = 46, IPPROTO_GRE = 47, IPPROTO_ESP = 50, IPPROTO_AH = 51, IPPROTO_ICMPV6 = 58, IPPROTO_NONE = 59, IPPROTO_DSTOPTS = 60, IPPROTO_MTP = 92, IPPROTO_ENCAP = 98, IPPROTO_PIM = 103, IPPROTO_COMP = 108, IPPROTO_SCTP = 132, IPPROTO_RAW = 255, IPPROTO_MAX }; typedef uint16_t in_port_t; enum { IPPORT_ECHO = 7, IPPORT_DISCARD = 9, IPPORT_SYSTAT = 11, IPPORT_DAYTIME = 13, IPPORT_NETSTAT = 15, IPPORT_FTP = 21, IPPORT_TELNET = 23, IPPORT_SMTP = 25, IPPORT_TIMESERVER = 37, IPPORT_NAMESERVER = 42, IPPORT_WHOIS = 43, IPPORT_MTP = 57, IPPORT_TFTP = 69, IPPORT_RJE = 77, IPPORT_FINGER = 79, IPPORT_TTYLINK = 87, IPPORT_SUPDUP = 95, IPPORT_EXECSERVER = 512, IPPORT_LOGINSERVER = 513, IPPORT_CMDSERVER = 514, IPPORT_EFSSERVER = 520, IPPORT_BIFFUDP = 512, IPPORT_WHOSERVER = 513, IPPORT_ROUTESERVER = 520, IPPORT_RESERVED = 1024, IPPORT_USERRESERVED = 5000 }; typedef uint32_t in_addr_t; struct in_addr { in_addr_t s_addr; }; struct in6_addr { union { uint8_t u6_addr8[16]; uint16_t u6_addr16[8]; uint32_t u6_addr32[4]; } in6_u; }; extern const struct in6_addr in6addr_any; extern const struct in6_addr in6addr_loopback; struct sockaddr_in { sa_family_t sin_family; in_port_t sin_port; struct in_addr sin_addr; unsigned char sin_zero[sizeof (struct sockaddr) - (sizeof (unsigned short int)) - sizeof (in_port_t) - sizeof (struct in_addr)]; }; struct sockaddr_in6 { sa_family_t sin6_family; in_port_t sin6_port; uint32_t sin6_flowinfo; struct in6_addr sin6_addr; uint32_t sin6_scope_id; }; struct ip_mreq { struct in_addr imr_multiaddr; struct in_addr imr_interface; }; struct ip_mreq_source { struct in_addr imr_multiaddr; struct in_addr imr_interface; struct in_addr imr_sourceaddr; }; struct ipv6_mreq { struct in6_addr ipv6mr_multiaddr; unsigned int ipv6mr_interface; }; struct group_req { uint32_t gr_interface; struct sockaddr_storage gr_group; }; struct group_source_req { uint32_t gsr_interface; struct sockaddr_storage gsr_group; struct sockaddr_storage gsr_source; }; struct ip_msfilter { struct in_addr imsf_multiaddr; struct in_addr imsf_interface; uint32_t imsf_fmode; uint32_t imsf_numsrc; struct in_addr imsf_slist[1]; }; struct group_filter { uint32_t gf_interface; struct sockaddr_storage gf_group; uint32_t gf_fmode; uint32_t gf_numsrc; struct sockaddr_storage gf_slist[1]; }; #line 1 "/usr/include/bits/in.h" #line 53 "/usr/include/bits/in.h" #line 65 "/usr/include/bits/in.h" struct ip_opts { struct in_addr ip_dst; char ip_opts[40]; }; struct ip_mreqn { struct in_addr imr_multiaddr; struct in_addr imr_address; int imr_ifindex; }; struct in_pktinfo { int ipi_ifindex; struct in_addr ipi_spec_dst; struct in_addr ipi_addr; }; #line 115 "/usr/include/bits/in.h" #line 135 "/usr/include/bits/in.h" #line 147 "/usr/include/bits/in.h" #line 344 "/usr/include/netinet/in.h" extern uint32_t ntohl (uint32_t __netlong) ; extern uint16_t ntohs (uint16_t __netshort) ; extern uint32_t htonl (uint32_t __hostlong) ; extern uint16_t htons (uint16_t __hostshort) ; #line 1 "/usr/include/bits/byteswap.h" static unsigned short int __bswap_16 (unsigned short int __bsx) { return ((((__bsx) >> 8) & 0xffu) | (((__bsx) & 0xffu) << 8)); } static unsigned int __bswap_32 (unsigned int __bsx) { return ((((__bsx) & 0xff000000u) >> 24) | (((__bsx) & 0x00ff0000u) >> 8) | (((__bsx) & 0x0000ff00u) << 8) | (((__bsx) & 0x000000ffu) << 24)); } #line 86 "/usr/include/bits/byteswap.h" #line 364 "/usr/include/netinet/in.h" #line 385 "/usr/include/netinet/in.h" extern int bindresvport (int __sockfd, struct sockaddr_in *__sock_in) ; extern int bindresvport6 (int __sockfd, struct sockaddr_in6 *__sock_in) ; struct in6_pktinfo { struct in6_addr ipi6_addr; unsigned int ipi6_ifindex; }; struct ip6_mtuinfo { struct sockaddr_in6 ip6m_addr; uint32_t ip6m_mtu; }; #line 548 "/usr/include/netinet/in.h" #line 29 "/usr/include/netdb.h" #line 1 "/usr/include/rpc/netdb.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 40 "/usr/include/rpc/netdb.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 43 "/usr/include/rpc/netdb.h" struct rpcent { char *r_name; char **r_aliases; int r_number; }; extern void setrpcent (int __stayopen) ; extern void endrpcent (void) ; extern struct rpcent *getrpcbyname (const char *__name) ; extern struct rpcent *getrpcbynumber (int __number) ; extern struct rpcent *getrpcent (void) ; extern int getrpcbyname_r (const char *__name, struct rpcent *__result_buf, char *__buffer, size_t __buflen, struct rpcent **__result) ; extern int getrpcbynumber_r (int __number, struct rpcent *__result_buf, char *__buffer, size_t __buflen, struct rpcent **__result) ; extern int getrpcent_r (struct rpcent *__result_buf, char *__buffer, size_t __buflen, struct rpcent **__result) ; #line 34 "/usr/include/netdb.h" #line 42 "/usr/include/netdb.h" #line 1 "/usr/include/bits/netdb.h" struct netent { char *n_name; char **n_aliases; int n_addrtype; uint32_t n_net; }; #line 44 "/usr/include/netdb.h" #line 52 "/usr/include/netdb.h" extern int *__h_errno_location (void) ; #line 75 "/usr/include/netdb.h" extern void herror (const char *__str) ; extern const char *hstrerror (int __err_num) ; struct hostent { char *h_name; char **h_aliases; int h_addrtype; int h_length; char **h_addr_list; }; extern void sethostent (int __stay_open); extern void endhostent (void); extern struct hostent *gethostent (void); extern struct hostent *gethostbyaddr (const void *__addr, __socklen_t __len, int __type); extern struct hostent *gethostbyname (const char *__name); extern struct hostent *gethostbyname2 (const char *__name, int __af); extern int gethostent_r (struct hostent * __result_buf, char * __buf, size_t __buflen, struct hostent ** __result, int * __h_errnop); extern int gethostbyaddr_r (const void * __addr, __socklen_t __len, int __type, struct hostent * __result_buf, char * __buf, size_t __buflen, struct hostent ** __result, int * __h_errnop); extern int gethostbyname_r (const char * __name, struct hostent * __result_buf, char * __buf, size_t __buflen, struct hostent ** __result, int * __h_errnop); extern int gethostbyname2_r (const char * __name, int __af, struct hostent * __result_buf, char * __buf, size_t __buflen, struct hostent ** __result, int * __h_errnop); extern void setnetent (int __stay_open); extern void endnetent (void); extern struct netent *getnetent (void); extern struct netent *getnetbyaddr (uint32_t __net, int __type); extern struct netent *getnetbyname (const char *__name); extern int getnetent_r (struct netent * __result_buf, char * __buf, size_t __buflen, struct netent ** __result, int * __h_errnop); extern int getnetbyaddr_r (uint32_t __net, int __type, struct netent * __result_buf, char * __buf, size_t __buflen, struct netent ** __result, int * __h_errnop); extern int getnetbyname_r (const char * __name, struct netent * __result_buf, char * __buf, size_t __buflen, struct netent ** __result, int * __h_errnop); struct servent { char *s_name; char **s_aliases; int s_port; char *s_proto; }; extern void setservent (int __stay_open); extern void endservent (void); extern struct servent *getservent (void); extern struct servent *getservbyname (const char *__name, const char *__proto); extern struct servent *getservbyport (int __port, const char *__proto); extern int getservent_r (struct servent * __result_buf, char * __buf, size_t __buflen, struct servent ** __result); extern int getservbyname_r (const char * __name, const char * __proto, struct servent * __result_buf, char * __buf, size_t __buflen, struct servent ** __result); extern int getservbyport_r (int __port, const char * __proto, struct servent * __result_buf, char * __buf, size_t __buflen, struct servent ** __result); struct protoent { char *p_name; char **p_aliases; int p_proto; }; extern void setprotoent (int __stay_open); extern void endprotoent (void); extern struct protoent *getprotoent (void); extern struct protoent *getprotobyname (const char *__name); extern struct protoent *getprotobynumber (int __proto); extern int getprotoent_r (struct protoent * __result_buf, char * __buf, size_t __buflen, struct protoent ** __result); extern int getprotobyname_r (const char * __name, struct protoent * __result_buf, char * __buf, size_t __buflen, struct protoent ** __result); extern int getprotobynumber_r (int __proto, struct protoent * __result_buf, char * __buf, size_t __buflen, struct protoent ** __result); extern int setnetgrent (const char *__netgroup); extern void endnetgrent (void); extern int getnetgrent (char ** __hostp, char ** __userp, char ** __domainp); extern int innetgr (const char *__netgroup, const char *__host, const char *__user, const char *domain); extern int getnetgrent_r (char ** __hostp, char ** __userp, char ** __domainp, char * __buffer, size_t __buflen); extern int rcmd (char ** __ahost, unsigned short int __rport, const char * __locuser, const char * __remuser, const char * __cmd, int * __fd2p); extern int rcmd_af (char ** __ahost, unsigned short int __rport, const char * __locuser, const char * __remuser, const char * __cmd, int * __fd2p, sa_family_t __af); extern int rexec (char ** __ahost, int __rport, const char * __name, const char * __pass, const char * __cmd, int * __fd2p); extern int rexec_af (char ** __ahost, int __rport, const char * __name, const char * __pass, const char * __cmd, int * __fd2p, sa_family_t __af); extern int ruserok (const char *__rhost, int __suser, const char *__remuser, const char *__locuser); extern int ruserok_af (const char *__rhost, int __suser, const char *__remuser, const char *__locuser, sa_family_t __af); extern int rresvport (int *__alport); extern int rresvport_af (int *__alport, sa_family_t __af); struct addrinfo { int ai_flags; int ai_family; int ai_socktype; int ai_protocol; socklen_t ai_addrlen; struct sockaddr *ai_addr; char *ai_canonname; struct addrinfo *ai_next; }; #line 567 "/usr/include/netdb.h" #line 587 "/usr/include/netdb.h" #line 609 "/usr/include/netdb.h" #line 625 "/usr/include/netdb.h" extern int getaddrinfo (const char * __name, const char * __service, const struct addrinfo * __req, struct addrinfo ** __pai); extern void freeaddrinfo (struct addrinfo *__ai) ; extern const char *gai_strerror (int __ecode) ; extern int getnameinfo (const struct sockaddr * __sa, socklen_t __salen, char * __host, socklen_t __hostlen, char * __serv, socklen_t __servlen, unsigned int __flags); #line 681 "/usr/include/netdb.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_NETDB_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: search.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/search.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 24 "/usr/include/search.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 27 "/usr/include/search.h" #line 42 "/usr/include/search.h" extern void insque (void *__elem, void *__prev) ; extern void remque (void *__elem) ; typedef int (*__compar_fn_t) (const void *, const void *); typedef enum { FIND, ENTER } ACTION; typedef struct entry { char *key; void *data; } ENTRY; struct _ENTRY; extern ENTRY *hsearch (ENTRY __item, ACTION __action) ; extern int hcreate (size_t __nel) ; extern void hdestroy (void) ; #line 114 "/usr/include/search.h" typedef enum { preorder, postorder, endorder, leaf } VISIT; extern void *tsearch (const void *__key, void **__rootp, __compar_fn_t __compar); extern void *tfind (const void *__key, void *const *__rootp, __compar_fn_t __compar); extern void *tdelete (const void * __key, void ** __rootp, __compar_fn_t __compar); typedef void (*__action_fn_t) (const void *__nodep, VISIT __value, int __level); extern void twalk (const void *__root, __action_fn_t __action); #line 163 "/usr/include/search.h" extern void *lfind (const void *__key, const void *__base, size_t *__nmemb, size_t __size, __compar_fn_t __compar); extern void *lsearch (const void *__key, void *__base, size_t *__nmemb, size_t __size, __compar_fn_t __compar); #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SEARCH_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: mathimf.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "mathimf.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "mathimf.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "mathimf.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c".: ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/procfs.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/sys/procfs.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/sys/procfs.h" #line 1 "/usr/include/signal.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 30 "/usr/include/signal.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 100 "/usr/include/bits/sigset.h" extern int __sigismember (const __sigset_t *, int); extern int __sigaddset (__sigset_t *, int); extern int __sigdelset (__sigset_t *, int); #line 124 "/usr/include/bits/sigset.h" #line 34 "/usr/include/signal.h" typedef __sig_atomic_t sig_atomic_t; typedef __sigset_t sigset_t; #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 58 "/usr/include/signal.h" #line 1 "/usr/include/bits/signum.h" #line 52 "/usr/include/bits/signum.h" #line 72 "/usr/include/bits/signum.h" #line 59 "/usr/include/signal.h" typedef __pid_t pid_t; typedef __uid_t uid_t; typedef void (*__sighandler_t) (int); extern __sighandler_t __sysv_signal (int __sig, __sighandler_t __handler) ; extern __sighandler_t signal (int __sig, __sighandler_t __handler) ; #line 104 "/usr/include/signal.h" #line 112 "/usr/include/signal.h" extern int kill (__pid_t __pid, int __sig) ; extern int killpg (__pid_t __pgrp, int __sig) ; extern int raise (int __sig) ; extern __sighandler_t ssignal (int __sig, __sighandler_t __handler) ; extern int gsignal (int __sig) ; extern void psignal (int __sig, const char *__s); extern int __sigpause (int __sig_or_mask, int __is_sig); #line 169 "/usr/include/signal.h" extern int sigblock (int __mask) ; extern int sigsetmask (int __mask) ; extern int siggetmask (void) ; typedef __sighandler_t sig_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 210 "/usr/include/signal.h" #line 1 "/usr/include/bits/siginfo.h" #line 1 "/usr/include/bits/wordsize.h" #line 26 "/usr/include/bits/siginfo.h" typedef union sigval { int sival_int; void *sival_ptr; } sigval_t; #line 50 "/usr/include/bits/siginfo.h" typedef struct siginfo { int si_signo; int si_errno; int si_code; union { int _pad[((128 / sizeof (int)) - 4)]; struct { __pid_t si_pid; __uid_t si_uid; } _kill; struct { int si_tid; int si_overrun; sigval_t si_sigval; } _timer; struct { __pid_t si_pid; __uid_t si_uid; sigval_t si_sigval; } _rt; struct { __pid_t si_pid; __uid_t si_uid; int si_status; __clock_t si_utime; __clock_t si_stime; } _sigchld; struct { void *si_addr; int si_trapno; } _sigfault; struct { int si_band; int si_fd; } _sigpoll; } _sifields; } siginfo_t; #line 127 "/usr/include/bits/siginfo.h" enum { SI_ASYNCNL = -60, SI_TKILL = -6, SI_SIGIO, SI_ASYNCIO, SI_MESGQ, SI_TIMER, SI_QUEUE, SI_USER, SI_KERNEL = 0x80 }; enum { ILL_ILLOPC = 1, ILL_ILLOPN, ILL_ILLADR, ILL_ILLTRP, ILL_PRVOPC, ILL_PRVREG, ILL_COPROC, ILL_BADSTK }; enum { FPE_INTDIV = 1, FPE_INTOVF, FPE_FLTDIV, FPE_FLTOVF, FPE_FLTUND, FPE_FLTRES, FPE_FLTINV, FPE_FLTSUB }; enum { SEGV_MAPERR = 1, SEGV_ACCERR }; enum { BUS_ADRALN = 1, BUS_ADRERR, BUS_OBJERR }; enum { TRAP_BRKPT = 1, TRAP_TRACE }; enum { CLD_EXITED = 1, CLD_KILLED, CLD_DUMPED, CLD_TRAPPED, CLD_STOPPED, CLD_CONTINUED }; enum { POLL_IN = 1, POLL_OUT, POLL_MSG, POLL_ERR, POLL_PRI, POLL_HUP }; enum { EMT_TAGOVF = 1 }; #line 281 "/usr/include/bits/siginfo.h" typedef struct sigevent { sigval_t sigev_value; int sigev_signo; int sigev_notify; union { int _pad[((64 / sizeof (int)) - 4)]; struct { void (*_function) (sigval_t); void *_attribute; } _sigev_thread; } _sigev_un; } sigevent_t; enum { SIGEV_SIGNAL = 0, SIGEV_NONE, SIGEV_THREAD, SIGEV_THREAD_ID = 4 }; #line 213 "/usr/include/signal.h" extern int sigemptyset (sigset_t *__set) ; extern int sigfillset (sigset_t *__set) ; extern int sigaddset (sigset_t *__set, int __signo) ; extern int sigdelset (sigset_t *__set, int __signo) ; extern int sigismember (const sigset_t *__set, int __signo) ; #line 243 "/usr/include/signal.h" #line 1 "/usr/include/bits/sigaction.h" struct sigaction { union { __sighandler_t sa_handler; void (*sa_sigaction) (int, siginfo_t *, void *); } __sigaction_handler; __sigset_t sa_mask; unsigned long sa_flags; void (*sa_restorer) (void); }; #line 66 "/usr/include/bits/sigaction.h" #line 247 "/usr/include/signal.h" extern int sigprocmask (int __how, const sigset_t * __set, sigset_t * __oset) ; extern int sigsuspend (const sigset_t *__set) ; extern int sigaction (int __sig, const struct sigaction * __act, struct sigaction * __oact) ; extern int sigpending (sigset_t *__set) ; extern int sigwait (const sigset_t * __set, int * __sig) ; extern int sigwaitinfo (const sigset_t * __set, siginfo_t * __info) ; extern int sigtimedwait (const sigset_t * __set, siginfo_t * __info, const struct timespec * __timeout) ; extern int sigqueue (__pid_t __pid, int __sig, const union sigval __val) ; extern const char *const _sys_siglist[65]; extern const char *const sys_siglist[65]; struct sigvec { __sighandler_t sv_handler; int sv_mask; int sv_flags; }; extern int sigvec (int __sig, const struct sigvec *__vec, struct sigvec *__ovec) ; #line 1 "/usr/include/bits/sigcontext.h" #line 1 "/usr/include/bits/wordsize.h" #line 24 "/usr/include/bits/sigcontext.h" #line 1 "/usr/include/stdint.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/stdint.h" #line 1 "/usr/include/bits/wchar.h" #line 28 "/usr/include/stdint.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/stdint.h" typedef signed char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char uint8_t; typedef unsigned short int uint16_t; typedef unsigned int uint32_t; typedef unsigned long int uint64_t; typedef signed char int_least8_t; typedef short int int_least16_t; typedef int int_least32_t; typedef long int int_least64_t; typedef unsigned char uint_least8_t; typedef unsigned short int uint_least16_t; typedef unsigned int uint_least32_t; typedef unsigned long int uint_least64_t; typedef signed char int_fast8_t; typedef long int int_fast16_t; typedef long int int_fast32_t; typedef long int int_fast64_t; #line 102 "/usr/include/stdint.h" typedef unsigned char uint_fast8_t; typedef unsigned long int uint_fast16_t; typedef unsigned long int uint_fast32_t; typedef unsigned long int uint_fast64_t; #line 115 "/usr/include/stdint.h" typedef long int intptr_t; typedef unsigned long int uintptr_t; #line 131 "/usr/include/stdint.h" typedef long int intmax_t; typedef unsigned long int uintmax_t; #line 143 "/usr/include/stdint.h" #line 156 "/usr/include/stdint.h" #line 205 "/usr/include/stdint.h" #line 215 "/usr/include/stdint.h" #line 226 "/usr/include/stdint.h" #line 238 "/usr/include/stdint.h" #line 259 "/usr/include/stdint.h" #line 298 "/usr/include/stdint.h" #line 308 "/usr/include/stdint.h" #line 317 "/usr/include/stdint.h" #line 25 "/usr/include/bits/sigcontext.h" #line 48 "/usr/include/bits/sigcontext.h" typedef struct { unsigned int si_float_regs [64]; unsigned long si_fsr; unsigned long si_gsr; unsigned long si_fprs; uint64_t si_xglob_regs[32]; uint32_t si_xfloat_regs[448]; uint64_t si_xasr; } __siginfo_fpu_t; struct sigcontext { char sigc_info[128]; struct { unsigned long u_regs[16]; unsigned long tstate; unsigned long tpc; unsigned long tnpc; unsigned int y; unsigned int fprs; } sigc_regs; __siginfo_fpu_t * sigc_fpu_save; uint64_t si_txar; uint64_t si_sccr; struct { void * ss_sp; int ss_flags; unsigned long ss_size; } sigc_stack; unsigned long sigc_mask; }; #line 334 "/usr/include/signal.h" extern int sigreturn (struct sigcontext *__scp) ; #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 344 "/usr/include/signal.h" extern int siginterrupt (int __sig, int __interrupt) ; #line 1 "/usr/include/bits/sigstack.h" struct sigstack { void *ss_sp; int ss_onstack; }; enum { SS_ONSTACK = 1, SS_DISABLE }; typedef struct sigaltstack { void *ss_sp; int ss_flags; size_t ss_size; } stack_t; #line 351 "/usr/include/signal.h" extern int sigstack (struct sigstack *__ss, struct sigstack *__oss) ; extern int sigaltstack (const struct sigaltstack * __ss, struct sigaltstack * __oss) ; #line 384 "/usr/include/signal.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 389 "/usr/include/signal.h" #line 1 "/usr/include/bits/sigthread.h" extern int pthread_sigmask (int __how, const __sigset_t * __newmask, __sigset_t * __oldmask); extern int pthread_kill (pthread_t __threadid, int __signo) ; #line 390 "/usr/include/signal.h" extern int __libc_current_sigrtmin (void) ; extern int __libc_current_sigrtmax (void) ; #line 28 "/usr/include/sys/procfs.h" #line 1 "/usr/include/sys/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 24 "/usr/include/sys/time.h" #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 28 "/usr/include/sys/time.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 30 "/usr/include/sys/time.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" #line 35 "/usr/include/bits/sigset.h" #line 35 "/usr/include/sys/select.h" #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 32 "/usr/include/sys/time.h" #line 52 "/usr/include/sys/time.h" struct timezone { int tz_minuteswest; int tz_dsttime; }; typedef struct timezone * __timezone_ptr_t; extern int gettimeofday (struct timeval * __tv, __timezone_ptr_t __tz) ; extern int settimeofday (const struct timeval *__tv, const struct timezone *__tz) ; extern int adjtime (const struct timeval *__delta, struct timeval *__olddelta) ; enum __itimer_which { ITIMER_REAL = 0, ITIMER_VIRTUAL = 1, ITIMER_PROF = 2 }; struct itimerval { struct timeval it_interval; struct timeval it_value; }; typedef int __itimer_which_t; extern int getitimer (__itimer_which_t __which, struct itimerval *__value) ; extern int setitimer (__itimer_which_t __which, const struct itimerval * __new, struct itimerval * __old) ; extern int utimes (const char *__file, const struct timeval __tvp[2]) ; extern int lutimes (const char *__file, const struct timeval __tvp[2]) ; extern int futimes (int __fd, const struct timeval __tvp[2]) ; #line 159 "/usr/include/sys/time.h" #line 190 "/usr/include/sys/time.h" #line 29 "/usr/include/sys/procfs.h" #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; #line 172 "/usr/include/sys/types.h" typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 30 "/usr/include/sys/procfs.h" #line 1 "/usr/include/sys/ucontext.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/sys/ucontext.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/sys/ucontext.h" #line 82 "/usr/include/sys/ucontext.h" typedef unsigned long mc_greg_t; typedef mc_greg_t mc_gregset_t[53]; struct mc_fq { unsigned long *mcfq_addr; unsigned int mcfq_insn; }; struct mc_fpu { union { unsigned int sregs[512]; unsigned long dregs[256]; long double qregs[128]; } mcfpu_fregs; unsigned long mcfpu_fsr; unsigned long mcfpu_fprs; unsigned long mcfpu_gsr; unsigned long mcfpu_xasr; struct mc_fq *mcfpu_fq; unsigned char mcfpu_qcnt; unsigned char mcfpu_qentsz; unsigned char mcfpu_enab; unsigned char pad[5]; }; typedef struct mc_fpu mc_fpu_t; typedef struct { mc_gregset_t mc_gregs; mc_greg_t mc_fp; mc_greg_t mc_i7; mc_fpu_t mc_fpregs; } mcontext_t; typedef struct ucontext { struct ucontext *uc_link; unsigned long uc_flags; unsigned long __uc_sigmask; mcontext_t uc_mcontext; stack_t uc_stack; __sigset_t uc_sigmask; } ucontext_t; #line 186 "/usr/include/sys/ucontext.h" typedef long greg_t; #line 211 "/usr/include/sys/ucontext.h" typedef greg_t gregset_t[21]; struct rwindow { greg_t rw_local[8]; greg_t rw_in[8]; }; typedef struct gwindows { int wbcnt; int *spbuf[31]; struct rwindow wbuf[31]; } gwindows_t; struct fpq { unsigned long *fpq_addr; unsigned long fpq_instr; }; struct fq { union { double whole; struct fpq fpq; } FQu; }; typedef struct fpu { union { unsigned fpu_regs[512]; double fpu_dregs[256]; long double fpu_qregs[128]; } fpu_fr; struct fq *fpu_q; unsigned long fpu_fsr; unsigned char fpu_qcnt; unsigned char fpu_q_entrysize; unsigned char fpu_en; unsigned long fpu_xasr; } fpregset_t; #line 31 "/usr/include/sys/procfs.h" #line 1 "/usr/include/sys/user.h" struct sunos_regs { unsigned int psr, pc, npc, y; unsigned int regs[15]; }; struct sunos_fpqueue { unsigned int *addr; unsigned int inst; }; struct sunos_fp { union { unsigned int regs[32]; double reg_dbls[16]; } fregs; unsigned int fsr; unsigned int flags; unsigned int extra; unsigned int fpq_count; struct sunos_fpqueue fpq[16]; }; struct sunos_fpu { struct sunos_fp fpstatus; }; struct user { unsigned int magic; unsigned int len; struct sunos_regs regs; struct { unsigned char a_dynamic :1; unsigned char a_toolversion :7; unsigned char a_machtype; unsigned short a_info; unsigned int a_text; unsigned int a_data; unsigned int a_bss; unsigned int a_syms; unsigned int a_entry; unsigned int a_trsize; unsigned int a_drsize; } uexec; int signal; size_t u_tsize; size_t u_dsize; size_t u_ssize; char u_comm[17]; struct sunos_fpu fpu; unsigned int sigcode; }; #line 32 "/usr/include/sys/procfs.h" #line 1 "/usr/include/bits/wordsize.h" #line 33 "/usr/include/sys/procfs.h" typedef struct { unsigned long pr_regs[32]; unsigned long pr_fsr; unsigned long pr_gsr; unsigned long pr_fprs; } elf_fpregset_t; #line 68 "/usr/include/sys/procfs.h" typedef unsigned long elf_greg_t; typedef elf_greg_t elf_gregset_t[36]; struct elf_siginfo { int si_signo; int si_code; int si_errno; }; struct elf_prstatus { struct elf_siginfo pr_info; short int pr_cursig; unsigned long int pr_sigpend; unsigned long int pr_sighold; __pid_t pr_pid; __pid_t pr_ppid; __pid_t pr_pgrp; __pid_t pr_sid; struct timeval pr_utime; struct timeval pr_stime; struct timeval pr_cutime; struct timeval pr_cstime; elf_gregset_t pr_reg; int pr_fpvalid; }; struct elf_prpsinfo { char pr_state; char pr_sname; char pr_zomb; char pr_nice; unsigned long int pr_flag; unsigned int pr_uid; unsigned int pr_gid; int pr_pid, pr_ppid, pr_pgrp, pr_sid; char pr_fname[16]; char pr_psargs[(80)]; }; typedef void *psaddr_t; typedef elf_gregset_t prgregset_t; typedef elf_fpregset_t prfpregset_t; #line 1 "/usr/include/xos_sft/asm/xreg.h" struct xregs { uint64_t xregs[32]; uint64_t txar; uint64_t sccr; uint64_t watchpoint; uint64_t dcucr; uint64_t rsv[12]; }; struct xfpregs { uint64_t xfpregs[224]; uint64_t xasr; uint64_t fprs; }; #line 136 "/usr/include/sys/procfs.h" typedef struct xregs prxgregset_t; typedef struct xfpregs prxfpregset_t; typedef __pid_t lwpid_t; typedef struct elf_prstatus prstatus_t; typedef struct elf_prpsinfo prpsinfo_t; typedef struct { union { unsigned int pr_regs[32]; double pr_dregs[16]; } pr_fr; unsigned int __unused; unsigned int pr_fsr; unsigned char pr_qcnt; unsigned char pr_q_entrysize; unsigned char pr_en; unsigned int pr_q[64]; } elf_fpregset_t32; typedef unsigned int elf_greg_t32; typedef elf_greg_t32 elf_gregset_t32[38]; struct elf_prstatus32 { struct elf_siginfo pr_info; short int pr_cursig; unsigned int pr_sigpend; unsigned int pr_sighold; __pid_t pr_pid; __pid_t pr_ppid; __pid_t pr_pgrp; __pid_t pr_sid; struct { int tv_sec, tv_usec; } pr_utime, pr_stime, pr_cutime, pr_cstime; elf_gregset_t32 pr_reg; int pr_fpvalid; }; struct elf_prpsinfo32 { char pr_state; char pr_sname; char pr_zomb; char pr_nice; unsigned int pr_flag; unsigned short int pr_uid; unsigned short int pr_gid; int pr_pid, pr_ppid, pr_pgrp, pr_sid; char pr_fname[16]; char pr_psargs[(80)]; }; typedef elf_gregset_t32 prgregset32_t; typedef elf_fpregset_t32 prfpregset32_t; typedef struct elf_prstatus32 prstatus32_t; typedef struct elf_prpsinfo32 prpsinfo32_t; #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_PROCFS_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/resource.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/sys/resource.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/sys/resource.h" #line 1 "/usr/include/bits/resource.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 26 "/usr/include/bits/resource.h" enum __rlimit_resource { RLIMIT_CPU = 0, RLIMIT_FSIZE = 1, RLIMIT_DATA = 2, RLIMIT_STACK = 3, RLIMIT_CORE = 4, __RLIMIT_RSS = 5, RLIMIT_NOFILE = 6, __RLIMIT_OFILE = RLIMIT_NOFILE, RLIMIT_AS = 9, __RLIMIT_NPROC = 7, __RLIMIT_MEMLOCK = 8, __RLIMIT_LOCKS = 10, __RLIMIT_SIGPENDING = 11, __RLIMIT_MSGQUEUE = 12, __RLIMIT_NICE = 13, __RLIMIT_RTPRIO = 14, __RLIMIT_NLIMITS = 15, __RLIM_NLIMITS = __RLIMIT_NLIMITS }; #line 135 "/usr/include/bits/resource.h" typedef __rlim_t rlim_t; #line 150 "/usr/include/bits/resource.h" struct rlimit { rlim_t rlim_cur; rlim_t rlim_max; }; #line 168 "/usr/include/bits/resource.h" enum __rusage_who { RUSAGE_SELF = 0, RUSAGE_CHILDREN = -1 }; #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 183 "/usr/include/bits/resource.h" struct rusage { struct timeval ru_utime; struct timeval ru_stime; long int ru_maxrss; long int ru_ixrss; long int ru_idrss; long int ru_isrss; long int ru_minflt; long int ru_majflt; long int ru_nswap; long int ru_inblock; long int ru_oublock; long int ru_msgsnd; long int ru_msgrcv; long int ru_nsignals; long int ru_nvcsw; long int ru_nivcsw; }; enum __priority_which { PRIO_PROCESS = 0, PRIO_PGRP = 1, PRIO_USER = 2 }; #line 26 "/usr/include/sys/resource.h" typedef __id_t id_t; typedef int __rlimit_resource_t; typedef int __rusage_who_t; typedef int __priority_which_t; extern int getrlimit (__rlimit_resource_t __resource, struct rlimit *__rlimits) ; #line 65 "/usr/include/sys/resource.h" extern int setrlimit (__rlimit_resource_t __resource, const struct rlimit *__rlimits) ; #line 85 "/usr/include/sys/resource.h" extern int getrusage (__rusage_who_t __who, struct rusage *__usage) ; extern int getpriority (__priority_which_t __which, id_t __who) ; extern int setpriority (__priority_which_t __which, id_t __who, int __prio) ; #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_RESOURCE_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: unistd.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/unistd.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/unistd.h" #line 66 "/usr/include/unistd.h" #line 1 "/usr/include/bits/posix_opt.h" #line 174 "/usr/include/unistd.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 189 "/usr/include/unistd.h" typedef __ssize_t ssize_t; #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 198 "/usr/include/unistd.h" typedef __gid_t gid_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 224 "/usr/include/unistd.h" typedef __useconds_t useconds_t; typedef __pid_t pid_t; typedef __intptr_t intptr_t; typedef __socklen_t socklen_t; extern int access (const char *__name, int __type) ; #line 270 "/usr/include/unistd.h" #line 278 "/usr/include/unistd.h" extern __off_t lseek (int __fd, __off_t __offset, int __whence) ; #line 315 "/usr/include/unistd.h" extern int close (int __fd); extern ssize_t read (int __fd, void *__buf, size_t __nbytes) ; extern ssize_t write (int __fd, const void *__buf, size_t __n) ; #line 379 "/usr/include/unistd.h" extern int pipe (int __pipedes[2]) ; extern unsigned int alarm (unsigned int __seconds) ; extern unsigned int sleep (unsigned int __seconds); extern __useconds_t ualarm (__useconds_t __value, __useconds_t __interval) ; extern int usleep (__useconds_t __useconds); extern int pause (void); extern int chown (const char *__file, __uid_t __owner, __gid_t __group) ; extern int fchown (int __fd, __uid_t __owner, __gid_t __group) ; extern int lchown (const char *__file, __uid_t __owner, __gid_t __group) ; #line 455 "/usr/include/unistd.h" extern int chdir (const char *__path) ; extern int fchdir (int __fd) ; extern char *getcwd (char *__buf, size_t __size) ; #line 479 "/usr/include/unistd.h" extern char *getwd (char *__buf) ; extern int dup (int __fd) ; extern int dup2 (int __fd, int __fd2) ; extern char **__environ; extern int execve (const char *__path, char *const __argv[], char *const __envp[]) ; #line 513 "/usr/include/unistd.h" extern int execv (const char *__path, char *const __argv[]) ; extern int execle (const char *__path, const char *__arg, ...) ; extern int execl (const char *__path, const char *__arg, ...) ; extern int execvp (const char *__file, char *const __argv[]) ; extern int execlp (const char *__file, const char *__arg, ...) ; extern int nice (int __inc) ; extern void _exit (int __status) ; #line 1 "/usr/include/bits/confname.h" enum { _PC_LINK_MAX, _PC_MAX_CANON, _PC_MAX_INPUT, _PC_NAME_MAX, _PC_PATH_MAX, _PC_PIPE_BUF, _PC_CHOWN_RESTRICTED, _PC_NO_TRUNC, _PC_VDISABLE, _PC_SYNC_IO, _PC_ASYNC_IO, _PC_PRIO_IO, _PC_SOCK_MAXBUF, _PC_FILESIZEBITS, _PC_REC_INCR_XFER_SIZE, _PC_REC_MAX_XFER_SIZE, _PC_REC_MIN_XFER_SIZE, _PC_REC_XFER_ALIGN, _PC_ALLOC_SIZE_MIN, _PC_SYMLINK_MAX, _PC_2_SYMLINKS }; enum { _SC_ARG_MAX, _SC_CHILD_MAX, _SC_CLK_TCK, _SC_NGROUPS_MAX, _SC_OPEN_MAX, _SC_STREAM_MAX, _SC_TZNAME_MAX, _SC_JOB_CONTROL, _SC_SAVED_IDS, _SC_REALTIME_SIGNALS, _SC_PRIORITY_SCHEDULING, _SC_TIMERS, _SC_ASYNCHRONOUS_IO, _SC_PRIORITIZED_IO, _SC_SYNCHRONIZED_IO, _SC_FSYNC, _SC_MAPPED_FILES, _SC_MEMLOCK, _SC_MEMLOCK_RANGE, _SC_MEMORY_PROTECTION, _SC_MESSAGE_PASSING, _SC_SEMAPHORES, _SC_SHARED_MEMORY_OBJECTS, _SC_AIO_LISTIO_MAX, _SC_AIO_MAX, _SC_AIO_PRIO_DELTA_MAX, _SC_DELAYTIMER_MAX, _SC_MQ_OPEN_MAX, _SC_MQ_PRIO_MAX, _SC_VERSION, _SC_PAGESIZE, _SC_RTSIG_MAX, _SC_SEM_NSEMS_MAX, _SC_SEM_VALUE_MAX, _SC_SIGQUEUE_MAX, _SC_TIMER_MAX, _SC_BC_BASE_MAX, _SC_BC_DIM_MAX, _SC_BC_SCALE_MAX, _SC_BC_STRING_MAX, _SC_COLL_WEIGHTS_MAX, _SC_EQUIV_CLASS_MAX, _SC_EXPR_NEST_MAX, _SC_LINE_MAX, _SC_RE_DUP_MAX, _SC_CHARCLASS_NAME_MAX, _SC_2_VERSION, _SC_2_C_BIND, _SC_2_C_DEV, _SC_2_FORT_DEV, _SC_2_FORT_RUN, _SC_2_SW_DEV, _SC_2_LOCALEDEF, _SC_PII, _SC_PII_XTI, _SC_PII_SOCKET, _SC_PII_INTERNET, _SC_PII_OSI, _SC_POLL, _SC_SELECT, _SC_UIO_MAXIOV, _SC_IOV_MAX = _SC_UIO_MAXIOV, _SC_PII_INTERNET_STREAM, _SC_PII_INTERNET_DGRAM, _SC_PII_OSI_COTS, _SC_PII_OSI_CLTS, _SC_PII_OSI_M, _SC_T_IOV_MAX, _SC_THREADS, _SC_THREAD_SAFE_FUNCTIONS, _SC_GETGR_R_SIZE_MAX, _SC_GETPW_R_SIZE_MAX, _SC_LOGIN_NAME_MAX, _SC_TTY_NAME_MAX, _SC_THREAD_DESTRUCTOR_ITERATIONS, _SC_THREAD_KEYS_MAX, _SC_THREAD_STACK_MIN, _SC_THREAD_THREADS_MAX, _SC_THREAD_ATTR_STACKADDR, _SC_THREAD_ATTR_STACKSIZE, _SC_THREAD_PRIORITY_SCHEDULING, _SC_THREAD_PRIO_INHERIT, _SC_THREAD_PRIO_PROTECT, _SC_THREAD_PROCESS_SHARED, _SC_NPROCESSORS_CONF, _SC_NPROCESSORS_ONLN, _SC_PHYS_PAGES, _SC_AVPHYS_PAGES, _SC_ATEXIT_MAX, _SC_PASS_MAX, _SC_XOPEN_VERSION, _SC_XOPEN_XCU_VERSION, _SC_XOPEN_UNIX, _SC_XOPEN_CRYPT, _SC_XOPEN_ENH_I18N, _SC_XOPEN_SHM, _SC_2_CHAR_TERM, _SC_2_C_VERSION, _SC_2_UPE, _SC_XOPEN_XPG2, _SC_XOPEN_XPG3, _SC_XOPEN_XPG4, _SC_CHAR_BIT, _SC_CHAR_MAX, _SC_CHAR_MIN, _SC_INT_MAX, _SC_INT_MIN, _SC_LONG_BIT, _SC_WORD_BIT, _SC_MB_LEN_MAX, _SC_NZERO, _SC_SSIZE_MAX, _SC_SCHAR_MAX, _SC_SCHAR_MIN, _SC_SHRT_MAX, _SC_SHRT_MIN, _SC_UCHAR_MAX, _SC_UINT_MAX, _SC_ULONG_MAX, _SC_USHRT_MAX, _SC_NL_ARGMAX, _SC_NL_LANGMAX, _SC_NL_MSGMAX, _SC_NL_NMAX, _SC_NL_SETMAX, _SC_NL_TEXTMAX, _SC_XBS5_ILP32_OFF32, _SC_XBS5_ILP32_OFFBIG, _SC_XBS5_LP64_OFF64, _SC_XBS5_LPBIG_OFFBIG, _SC_XOPEN_LEGACY, _SC_XOPEN_REALTIME, _SC_XOPEN_REALTIME_THREADS, _SC_ADVISORY_INFO, _SC_BARRIERS, _SC_BASE, _SC_C_LANG_SUPPORT, _SC_C_LANG_SUPPORT_R, _SC_CLOCK_SELECTION, _SC_CPUTIME, _SC_THREAD_CPUTIME, _SC_DEVICE_IO, _SC_DEVICE_SPECIFIC, _SC_DEVICE_SPECIFIC_R, _SC_FD_MGMT, _SC_FIFO, _SC_PIPE, _SC_FILE_ATTRIBUTES, _SC_FILE_LOCKING, _SC_FILE_SYSTEM, _SC_MONOTONIC_CLOCK, _SC_MULTI_PROCESS, _SC_SINGLE_PROCESS, _SC_NETWORKING, _SC_READER_WRITER_LOCKS, _SC_SPIN_LOCKS, _SC_REGEXP, _SC_REGEX_VERSION, _SC_SHELL, _SC_SIGNALS, _SC_SPAWN, _SC_SPORADIC_SERVER, _SC_THREAD_SPORADIC_SERVER, _SC_SYSTEM_DATABASE, _SC_SYSTEM_DATABASE_R, _SC_TIMEOUTS, _SC_TYPED_MEMORY_OBJECTS, _SC_USER_GROUPS, _SC_USER_GROUPS_R, _SC_2_PBS, _SC_2_PBS_ACCOUNTING, _SC_2_PBS_LOCATE, _SC_2_PBS_MESSAGE, _SC_2_PBS_TRACK, _SC_SYMLOOP_MAX, _SC_STREAMS, _SC_2_PBS_CHECKPOINT, _SC_V6_ILP32_OFF32, _SC_V6_ILP32_OFFBIG, _SC_V6_LP64_OFF64, _SC_V6_LPBIG_OFFBIG, _SC_HOST_NAME_MAX, _SC_TRACE, _SC_TRACE_EVENT_FILTER, _SC_TRACE_INHERIT, _SC_TRACE_LOG, _SC_LEVEL1_ICACHE_SIZE, _SC_LEVEL1_ICACHE_ASSOC, _SC_LEVEL1_ICACHE_LINESIZE, _SC_LEVEL1_DCACHE_SIZE, _SC_LEVEL1_DCACHE_ASSOC, _SC_LEVEL1_DCACHE_LINESIZE, _SC_LEVEL2_CACHE_SIZE, _SC_LEVEL2_CACHE_ASSOC, _SC_LEVEL2_CACHE_LINESIZE, _SC_LEVEL3_CACHE_SIZE, _SC_LEVEL3_CACHE_ASSOC, _SC_LEVEL3_CACHE_LINESIZE, _SC_LEVEL4_CACHE_SIZE, _SC_LEVEL4_CACHE_ASSOC, _SC_LEVEL4_CACHE_LINESIZE, _SC_IPV6 = _SC_LEVEL1_ICACHE_SIZE + 50, _SC_RAW_SOCKETS }; enum { _CS_PATH, _CS_V6_WIDTH_RESTRICTED_ENVS, _CS_GNU_LIBC_VERSION, _CS_GNU_LIBPTHREAD_VERSION, _CS_LFS_CFLAGS = 1000, _CS_LFS_LDFLAGS, _CS_LFS_LIBS, _CS_LFS_LINTFLAGS, _CS_LFS64_CFLAGS, _CS_LFS64_LDFLAGS, _CS_LFS64_LIBS, _CS_LFS64_LINTFLAGS, _CS_XBS5_ILP32_OFF32_CFLAGS = 1100, _CS_XBS5_ILP32_OFF32_LDFLAGS, _CS_XBS5_ILP32_OFF32_LIBS, _CS_XBS5_ILP32_OFF32_LINTFLAGS, _CS_XBS5_ILP32_OFFBIG_CFLAGS, _CS_XBS5_ILP32_OFFBIG_LDFLAGS, _CS_XBS5_ILP32_OFFBIG_LIBS, _CS_XBS5_ILP32_OFFBIG_LINTFLAGS, _CS_XBS5_LP64_OFF64_CFLAGS, _CS_XBS5_LP64_OFF64_LDFLAGS, _CS_XBS5_LP64_OFF64_LIBS, _CS_XBS5_LP64_OFF64_LINTFLAGS, _CS_XBS5_LPBIG_OFFBIG_CFLAGS, _CS_XBS5_LPBIG_OFFBIG_LDFLAGS, _CS_XBS5_LPBIG_OFFBIG_LIBS, _CS_XBS5_LPBIG_OFFBIG_LINTFLAGS, _CS_POSIX_V6_ILP32_OFF32_CFLAGS, _CS_POSIX_V6_ILP32_OFF32_LDFLAGS, _CS_POSIX_V6_ILP32_OFF32_LIBS, _CS_POSIX_V6_ILP32_OFF32_LINTFLAGS, _CS_POSIX_V6_ILP32_OFFBIG_CFLAGS, _CS_POSIX_V6_ILP32_OFFBIG_LDFLAGS, _CS_POSIX_V6_ILP32_OFFBIG_LIBS, _CS_POSIX_V6_ILP32_OFFBIG_LINTFLAGS, _CS_POSIX_V6_LP64_OFF64_CFLAGS, _CS_POSIX_V6_LP64_OFF64_LDFLAGS, _CS_POSIX_V6_LP64_OFF64_LIBS, _CS_POSIX_V6_LP64_OFF64_LINTFLAGS, _CS_POSIX_V6_LPBIG_OFFBIG_CFLAGS, _CS_POSIX_V6_LPBIG_OFFBIG_LDFLAGS, _CS_POSIX_V6_LPBIG_OFFBIG_LIBS, _CS_POSIX_V6_LPBIG_OFFBIG_LINTFLAGS }; #line 555 "/usr/include/unistd.h" extern long int pathconf (const char *__path, int __name) ; extern long int fpathconf (int __fd, int __name) ; extern long int sysconf (int __name) ; extern size_t confstr (int __name, char *__buf, size_t __len) ; extern __pid_t getpid (void) ; extern __pid_t getppid (void) ; extern __pid_t getpgrp (void) ; #line 589 "/usr/include/unistd.h" extern __pid_t __getpgid (__pid_t __pid) ; extern int setpgid (__pid_t __pid, __pid_t __pgid) ; extern int setpgrp (void) ; #line 630 "/usr/include/unistd.h" extern __pid_t setsid (void) ; extern __uid_t getuid (void) ; extern __uid_t geteuid (void) ; extern __gid_t getgid (void) ; extern __gid_t getegid (void) ; extern int getgroups (int __size, __gid_t __list[]) ; extern int setuid (__uid_t __uid) ; extern int setreuid (__uid_t __ruid, __uid_t __euid) ; extern int seteuid (__uid_t __uid) ; extern int setgid (__gid_t __gid) ; extern int setregid (__gid_t __rgid, __gid_t __egid) ; extern int setegid (__gid_t __gid) ; #line 718 "/usr/include/unistd.h" extern __pid_t fork (void) ; extern __pid_t vfork (void) ; extern char *ttyname (int __fd) ; extern int ttyname_r (int __fd, char *__buf, size_t __buflen) ; extern int isatty (int __fd) ; extern int ttyslot (void) ; extern int link (const char *__from, const char *__to) ; #line 766 "/usr/include/unistd.h" extern int symlink (const char *__from, const char *__to) ; extern ssize_t readlink (const char * __path, char * __buf, size_t __len) ; #line 790 "/usr/include/unistd.h" extern int unlink (const char *__name) ; extern int rmdir (const char *__path) ; extern __pid_t tcgetpgrp (int __fd) ; extern int tcsetpgrp (int __fd, __pid_t __pgrp_id) ; extern char *getlogin (void); extern int getlogin_r (char *__name, size_t __name_len) ; extern int setlogin (const char *__name) ; #line 1 "/usr/include/getopt.h" #line 48 "/usr/include/getopt.h" extern char *optarg; extern int optind; extern int opterr; extern int optopt; #line 122 "/usr/include/getopt.h" extern int getopt (int ___argc, char *const *___argv, const char *__shortopts) ; #line 169 "/usr/include/getopt.h" #line 838 "/usr/include/unistd.h" extern int gethostname (char *__name, size_t __len) ; extern int sethostname (const char *__name, size_t __len) ; extern int sethostid (long int __id) ; extern int getdomainname (char *__name, size_t __len) ; extern int setdomainname (const char *__name, size_t __len) ; extern int vhangup (void) ; extern int revoke (const char *__file) ; extern int profil (unsigned short int *__sample_buffer, size_t __size, size_t __offset, unsigned int __scale) ; extern int acct (const char *__name) ; extern char *getusershell (void) ; extern void endusershell (void) ; extern void setusershell (void) ; extern int daemon (int __nochdir, int __noclose) ; extern int chroot (const char *__path) ; extern char *getpass (const char *__prompt) ; extern int fsync (int __fd); extern long int gethostid (void); extern void sync (void) ; extern int getpagesize (void) ; extern int getdtablesize (void) ; extern int truncate (const char *__file, __off_t __length) ; #line 963 "/usr/include/unistd.h" extern int ftruncate (int __fd, __off_t __length) ; #line 982 "/usr/include/unistd.h" extern int brk (void *__addr) ; extern void *sbrk (intptr_t __delta) ; extern long int syscall (long int __sysno, ...) ; extern int lockf (int __fd, int __cmd, __off_t __len) ; #line 1047 "/usr/include/unistd.h" #line 1061 "/usr/include/unistd.h" extern int fdatasync (int __fildes); #line 1088 "/usr/include/unistd.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_UNISTD_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: netinet/in.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/netinet/in.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 24 "/usr/include/netinet/in.h" #line 1 "/usr/include/stdint.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/stdint.h" #line 1 "/usr/include/bits/wchar.h" #line 28 "/usr/include/stdint.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/stdint.h" typedef signed char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char uint8_t; typedef unsigned short int uint16_t; typedef unsigned int uint32_t; typedef unsigned long int uint64_t; typedef signed char int_least8_t; typedef short int int_least16_t; typedef int int_least32_t; typedef long int int_least64_t; typedef unsigned char uint_least8_t; typedef unsigned short int uint_least16_t; typedef unsigned int uint_least32_t; typedef unsigned long int uint_least64_t; typedef signed char int_fast8_t; typedef long int int_fast16_t; typedef long int int_fast32_t; typedef long int int_fast64_t; #line 102 "/usr/include/stdint.h" typedef unsigned char uint_fast8_t; typedef unsigned long int uint_fast16_t; typedef unsigned long int uint_fast32_t; typedef unsigned long int uint_fast64_t; #line 115 "/usr/include/stdint.h" typedef long int intptr_t; typedef unsigned long int uintptr_t; #line 131 "/usr/include/stdint.h" typedef long int intmax_t; typedef unsigned long int uintmax_t; #line 143 "/usr/include/stdint.h" #line 156 "/usr/include/stdint.h" #line 205 "/usr/include/stdint.h" #line 215 "/usr/include/stdint.h" #line 226 "/usr/include/stdint.h" #line 238 "/usr/include/stdint.h" #line 259 "/usr/include/stdint.h" #line 298 "/usr/include/stdint.h" #line 308 "/usr/include/stdint.h" #line 317 "/usr/include/stdint.h" #line 25 "/usr/include/netinet/in.h" #line 1 "/usr/include/sys/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/socket.h" #line 1 "/usr/include/sys/uio.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/sys/uio.h" #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; #line 172 "/usr/include/sys/types.h" typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 25 "/usr/include/sys/uio.h" #line 1 "/usr/include/bits/uio.h" struct iovec { void *iov_base; size_t iov_len; }; #line 30 "/usr/include/sys/uio.h" extern ssize_t readv (int __fd, const struct iovec *__iovec, int __count); extern ssize_t writev (int __fd, const struct iovec *__iovec, int __count); #line 29 "/usr/include/sys/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 31 "/usr/include/sys/socket.h" #line 1 "/usr/include/bits/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 31 "/usr/include/bits/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 7 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "/usr/include/bits/posix1_lim.h" #line 1 "/usr/include/bits/local_lim.h" #line 34 "/usr/include/bits/local_lim.h" #line 1 "/usr/include/linux/limits.h" #line 17 "/usr/include/linux/limits.h" #line 37 "/usr/include/bits/local_lim.h" #line 154 "/usr/include/bits/posix1_lim.h" #line 62 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "/usr/include/bits/posix2_lim.h" #line 87 "/usr/include/bits/posix2_lim.h" #line 66 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 33 "/usr/include/bits/socket.h" typedef __socklen_t socklen_t; enum __socket_type { SOCK_STREAM = 1, SOCK_DGRAM = 2, SOCK_RAW = 3, SOCK_RDM = 4, SOCK_SEQPACKET = 5, SOCK_PACKET = 10 }; #line 96 "/usr/include/bits/socket.h" #line 130 "/usr/include/bits/socket.h" #line 142 "/usr/include/bits/socket.h" #line 1 "/usr/include/bits/sockaddr.h" typedef unsigned short int sa_family_t; #line 148 "/usr/include/bits/socket.h" struct sockaddr { sa_family_t sa_family; char sa_data[14]; }; #line 166 "/usr/include/bits/socket.h" struct sockaddr_storage { sa_family_t ss_family; __uint64_t __ss_align; char __ss_padding[(128 - (2 * sizeof (__uint64_t)))]; }; enum { MSG_OOB = 0x01, MSG_PEEK = 0x02, MSG_DONTROUTE = 0x04, #line 189 "/usr/include/bits/socket.h" MSG_CTRUNC = 0x08, MSG_PROXY = 0x10, MSG_TRUNC = 0x20, MSG_DONTWAIT = 0x40, MSG_EOR = 0x80, MSG_WAITALL = 0x100, MSG_FIN = 0x200, MSG_SYN = 0x400, MSG_CONFIRM = 0x800, MSG_RST = 0x1000, MSG_ERRQUEUE = 0x2000, MSG_NOSIGNAL = 0x4000, MSG_MORE = 0x8000, MSG_CMSG_CLOEXEC = 0x40000000 }; struct msghdr { void *msg_name; socklen_t msg_namelen; struct iovec *msg_iov; size_t msg_iovlen; void *msg_control; size_t msg_controllen; int msg_flags; }; struct cmsghdr { size_t cmsg_len; int cmsg_level; int cmsg_type; unsigned char __cmsg_data []; }; #line 272 "/usr/include/bits/socket.h" extern struct cmsghdr *__cmsg_nxthdr (struct msghdr *__mhdr, struct cmsghdr *__cmsg) ; #line 297 "/usr/include/bits/socket.h" enum { SCM_RIGHTS = 0x01 , SCM_CREDENTIALS = 0x02 }; struct ucred { pid_t pid; uid_t uid; gid_t gid; }; #line 1 "/usr/include/asm/socket.h" #line 1 "/usr/include/asm-s64fx/socket.h" #line 1 "/usr/include/asm/sockios.h" #line 1 "/usr/include/asm-s64fx/sockios.h" #line 12 "/usr/include/asm-s64fx/sockios.h" #line 6 "/usr/include/asm/sockios.h" #line 6 "/usr/include/asm-s64fx/socket.h" #line 19 "/usr/include/asm-s64fx/socket.h" #line 26 "/usr/include/asm-s64fx/socket.h" #line 36 "/usr/include/asm-s64fx/socket.h" #line 6 "/usr/include/asm/socket.h" #line 321 "/usr/include/bits/socket.h" struct linger { int l_onoff; int l_linger; }; #line 37 "/usr/include/sys/socket.h" struct osockaddr { unsigned short int sa_family; unsigned char sa_data[14]; }; enum { SHUT_RD = 0, SHUT_WR, SHUT_RDWR }; #line 96 "/usr/include/sys/socket.h" extern int socket (int __domain, int __type, int __protocol) ; extern int socketpair (int __domain, int __type, int __protocol, int __fds[2]) ; extern int bind (int __fd, const struct sockaddr * __addr, socklen_t __len) ; extern int getsockname (int __fd, struct sockaddr * __addr, socklen_t * __len) ; extern int connect (int __fd, const struct sockaddr * __addr, socklen_t __len); extern int getpeername (int __fd, struct sockaddr * __addr, socklen_t * __len) ; extern ssize_t send (int __fd, const void *__buf, size_t __n, int __flags); extern ssize_t recv (int __fd, void *__buf, size_t __n, int __flags); extern ssize_t sendto (int __fd, const void *__buf, size_t __n, int __flags, const struct sockaddr * __addr, socklen_t __addr_len); extern ssize_t recvfrom (int __fd, void * __buf, size_t __n, int __flags, struct sockaddr * __addr, socklen_t * __addr_len); extern ssize_t sendmsg (int __fd, const struct msghdr *__message, int __flags); extern ssize_t recvmsg (int __fd, struct msghdr *__message, int __flags); extern int getsockopt (int __fd, int __level, int __optname, void * __optval, socklen_t * __optlen) ; extern int setsockopt (int __fd, int __level, int __optname, const void *__optval, socklen_t __optlen) ; extern int listen (int __fd, int __n) ; extern int accept (int __fd, struct sockaddr * __addr, socklen_t * __addr_len); extern int shutdown (int __fd, int __how) ; extern int sockatmark (int __fd) ; extern int isfdtype (int __fd, int __fdtype) ; #line 26 "/usr/include/netinet/in.h" enum { IPPROTO_IP = 0, IPPROTO_HOPOPTS = 0, IPPROTO_ICMP = 1, IPPROTO_IGMP = 2, IPPROTO_IPIP = 4, IPPROTO_TCP = 6, IPPROTO_EGP = 8, IPPROTO_PUP = 12, IPPROTO_UDP = 17, IPPROTO_IDP = 22, IPPROTO_TP = 29, IPPROTO_IPV6 = 41, IPPROTO_ROUTING = 43, IPPROTO_FRAGMENT = 44, IPPROTO_RSVP = 46, IPPROTO_GRE = 47, IPPROTO_ESP = 50, IPPROTO_AH = 51, IPPROTO_ICMPV6 = 58, IPPROTO_NONE = 59, IPPROTO_DSTOPTS = 60, IPPROTO_MTP = 92, IPPROTO_ENCAP = 98, IPPROTO_PIM = 103, IPPROTO_COMP = 108, IPPROTO_SCTP = 132, IPPROTO_RAW = 255, IPPROTO_MAX }; typedef uint16_t in_port_t; enum { IPPORT_ECHO = 7, IPPORT_DISCARD = 9, IPPORT_SYSTAT = 11, IPPORT_DAYTIME = 13, IPPORT_NETSTAT = 15, IPPORT_FTP = 21, IPPORT_TELNET = 23, IPPORT_SMTP = 25, IPPORT_TIMESERVER = 37, IPPORT_NAMESERVER = 42, IPPORT_WHOIS = 43, IPPORT_MTP = 57, IPPORT_TFTP = 69, IPPORT_RJE = 77, IPPORT_FINGER = 79, IPPORT_TTYLINK = 87, IPPORT_SUPDUP = 95, IPPORT_EXECSERVER = 512, IPPORT_LOGINSERVER = 513, IPPORT_CMDSERVER = 514, IPPORT_EFSSERVER = 520, IPPORT_BIFFUDP = 512, IPPORT_WHOSERVER = 513, IPPORT_ROUTESERVER = 520, IPPORT_RESERVED = 1024, IPPORT_USERRESERVED = 5000 }; typedef uint32_t in_addr_t; struct in_addr { in_addr_t s_addr; }; struct in6_addr { union { uint8_t u6_addr8[16]; uint16_t u6_addr16[8]; uint32_t u6_addr32[4]; } in6_u; }; extern const struct in6_addr in6addr_any; extern const struct in6_addr in6addr_loopback; struct sockaddr_in { sa_family_t sin_family; in_port_t sin_port; struct in_addr sin_addr; unsigned char sin_zero[sizeof (struct sockaddr) - (sizeof (unsigned short int)) - sizeof (in_port_t) - sizeof (struct in_addr)]; }; struct sockaddr_in6 { sa_family_t sin6_family; in_port_t sin6_port; uint32_t sin6_flowinfo; struct in6_addr sin6_addr; uint32_t sin6_scope_id; }; struct ip_mreq { struct in_addr imr_multiaddr; struct in_addr imr_interface; }; struct ip_mreq_source { struct in_addr imr_multiaddr; struct in_addr imr_interface; struct in_addr imr_sourceaddr; }; struct ipv6_mreq { struct in6_addr ipv6mr_multiaddr; unsigned int ipv6mr_interface; }; struct group_req { uint32_t gr_interface; struct sockaddr_storage gr_group; }; struct group_source_req { uint32_t gsr_interface; struct sockaddr_storage gsr_group; struct sockaddr_storage gsr_source; }; struct ip_msfilter { struct in_addr imsf_multiaddr; struct in_addr imsf_interface; uint32_t imsf_fmode; uint32_t imsf_numsrc; struct in_addr imsf_slist[1]; }; struct group_filter { uint32_t gf_interface; struct sockaddr_storage gf_group; uint32_t gf_fmode; uint32_t gf_numsrc; struct sockaddr_storage gf_slist[1]; }; #line 1 "/usr/include/bits/in.h" #line 53 "/usr/include/bits/in.h" #line 65 "/usr/include/bits/in.h" struct ip_opts { struct in_addr ip_dst; char ip_opts[40]; }; struct ip_mreqn { struct in_addr imr_multiaddr; struct in_addr imr_address; int imr_ifindex; }; struct in_pktinfo { int ipi_ifindex; struct in_addr ipi_spec_dst; struct in_addr ipi_addr; }; #line 115 "/usr/include/bits/in.h" #line 135 "/usr/include/bits/in.h" #line 147 "/usr/include/bits/in.h" #line 344 "/usr/include/netinet/in.h" extern uint32_t ntohl (uint32_t __netlong) ; extern uint16_t ntohs (uint16_t __netshort) ; extern uint32_t htonl (uint32_t __hostlong) ; extern uint16_t htons (uint16_t __hostshort) ; #line 1 "/usr/include/bits/byteswap.h" static unsigned short int __bswap_16 (unsigned short int __bsx) { return ((((__bsx) >> 8) & 0xffu) | (((__bsx) & 0xffu) << 8)); } static unsigned int __bswap_32 (unsigned int __bsx) { return ((((__bsx) & 0xff000000u) >> 24) | (((__bsx) & 0x00ff0000u) >> 8) | (((__bsx) & 0x0000ff00u) << 8) | (((__bsx) & 0x000000ffu) << 24)); } #line 86 "/usr/include/bits/byteswap.h" #line 364 "/usr/include/netinet/in.h" #line 385 "/usr/include/netinet/in.h" extern int bindresvport (int __sockfd, struct sockaddr_in *__sock_in) ; extern int bindresvport6 (int __sockfd, struct sockaddr_in6 *__sock_in) ; struct in6_pktinfo { struct in6_addr ipi6_addr; unsigned int ipi6_ifindex; }; struct ip6_mtuinfo { struct sockaddr_in6 ip6m_addr; uint32_t ip6m_mtu; }; #line 548 "/usr/include/netinet/in.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_NETINET_IN_H" to "1" ================================================================================ TEST checkRecursiveMacros from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:218) TESTING: checkRecursiveMacros from config.headers(config/BuildSystem/config/headers.py:218) Checks that the preprocessor allows recursive macros, and if not defines HAVE_BROKEN_RECURSIVE_MACRO Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" void a(int i, int j) {} #define a(b) a(b,__LINE__) int main() { a(0); ; return 0; } ================================================================================ TEST configureCacheDetails from config.utilities.cacheDetails(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/cacheDetails.py:78) TESTING: configureCacheDetails from config.utilities.cacheDetails(config/BuildSystem/config/utilities/cacheDetails.py:78) Try to determine the size and associativity of the cache. Pushing language C All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include long getconf_LEVEL1_DCACHE_SIZE() { long val = sysconf(_SC_LEVEL1_DCACHE_SIZE); return (16 <= val && val <= 2147483647) ? val : 32768; } int main() { ; return 0; } Popping language C Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include long getconf_LEVEL1_DCACHE_SIZE() { long val = sysconf(_SC_LEVEL1_DCACHE_SIZE); return (16 <= val && val <= 2147483647) ? val : 32768; } int main() { FILE *output = fopen("conftestval","w"); if (!output) return 1; fprintf(output,"%ld",getconf_LEVEL1_DCACHE_SIZE()); fclose(output);; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest Popping language C Defined "LEVEL1_DCACHE_SIZE" to "32768" Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include long getconf_LEVEL1_DCACHE_LINESIZE() { long val = sysconf(_SC_LEVEL1_DCACHE_LINESIZE); return (16 <= val && val <= 2147483647) ? val : 32; } int main() { FILE *output = fopen("conftestval","w"); if (!output) return 1; fprintf(output,"%ld",getconf_LEVEL1_DCACHE_LINESIZE()); fclose(output);; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest Popping language C Defined "LEVEL1_DCACHE_LINESIZE" to "32" Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include long getconf_LEVEL1_DCACHE_ASSOC() { long val = sysconf(_SC_LEVEL1_DCACHE_ASSOC); return (0 <= val && val <= 2147483647) ? val : 2; } int main() { FILE *output = fopen("conftestval","w"); if (!output) return 1; fprintf(output,"%ld",getconf_LEVEL1_DCACHE_ASSOC()); fclose(output);; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails/conftest Popping language C Defined "LEVEL1_DCACHE_ASSOC" to "0" ================================================================================ TEST check_siginfo_t from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:46) TESTING: check_siginfo_t from config.types(config/BuildSystem/config/types.py:46) Checks if siginfo_t exists in signal.h. This check is for windows, and C89 check. Checking for type: siginfo_t All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c", line 13: warning: variable "a" was declared but never referenced siginfo_t a;; ^ Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { siginfo_t a;; return 0; } siginfo_t found Defined "HAVE_SIGINFO_T" to "1" ================================================================================ TEST check__int64 from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:52) TESTING: check__int64 from config.types(config/BuildSystem/config/types.py:52) Checks if __int64 exists. This is primarily for windows. Checking for type: __int64 Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Possible ERROR while running compiler: exit code 512 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c", line 13: error: identifier "__int64" is undefined __int64 a;; ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { __int64 a;; return 0; } __int64 found ================================================================================ TEST checkSizeTypes from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:58) TESTING: checkSizeTypes from config.types(config/BuildSystem/config/types.py:58) Checks for types associated with sizes, such as size_t. Checking for type: size_t Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c", line 13: warning: variable "a" was declared but never referenced size_t a;; ^ Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { size_t a;; return 0; } size_t found ================================================================================ TEST checkFileTypes from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:68) TESTING: checkFileTypes from config.types(config/BuildSystem/config/types.py:68) Checks for types associated with files, such as mode_t, off_t, etc. Checking for type: mode_t Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c", line 13: warning: variable "a" was declared but never referenced mode_t a;; ^ Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { mode_t a;; return 0; } mode_t found Checking for type: off_t Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c", line 13: warning: variable "a" was declared but never referenced off_t a;; ^ Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { off_t a;; return 0; } off_t found ================================================================================ TEST checkIntegerTypes from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:63) TESTING: checkIntegerTypes from config.types(config/BuildSystem/config/types.py:63) Checks for types associated with integers, such as int32_t. Checking for type: int32_t Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c", line 13: warning: variable "a" was declared but never referenced int32_t a;; ^ Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { int32_t a;; return 0; } int32_t found ================================================================================ TEST checkPID from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:74) TESTING: checkPID from config.types(config/BuildSystem/config/types.py:74) Checks for pid_t, and defines it if necessary Checking for type: pid_t Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c", line 13: warning: variable "a" was declared but never referenced pid_t a;; ^ Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { pid_t a;; return 0; } pid_t found ================================================================================ TEST checkUID from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:78) TESTING: checkUID from config.types(config/BuildSystem/config/types.py:78) Checks for uid_t and gid_t, and defines them if necessary Source: #include "confdefs.h" #include "conffix.h" #include Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c" #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; typedef char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c" ================================================================================ TEST checkSignal from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:85) TESTING: checkSignal from config.types(config/BuildSystem/config/types.py:85) Checks the return type of signal() and defines RETSIGTYPE to that type name Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #ifdef signal #undef signal #endif #ifdef __cplusplus extern "C" void (*signal (int, void(*)(int)))(int); #else void (*signal())(); #endif int main() { ; return 0; } Defined "RETSIGTYPE" to "void" ================================================================================ TEST checkC99Complex from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:106) TESTING: checkC99Complex from config.types(config/BuildSystem/config/types.py:106) Check for complex numbers in in C99 std Note that since PETSc source code uses _Complex we test specifically for that, not complex Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c", line 6: warning: variable "x" was set but never used double _Complex x; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { double _Complex x; x = I; ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c", line 6: warning: variable "x" was set but never used double _Complex x; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { double _Complex x; x = I; ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_C99_COMPLEX" to "1" ================================================================================ TEST checkCxxComplex from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:117) TESTING: checkCxxComplex from config.types(config/BuildSystem/config/types.py:117) Check for complex numbers in namespace std Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { std::complex x; ; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_CXX_COMPLEX" to "1" Popping language Cxx ================================================================================ TEST checkFortranKind from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:138) TESTING: checkFortranKind from config.types(config/BuildSystem/config/types.py:138) Checks whether selected_int_kind etc work USE_FORTRANKIND Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.F Possible ERROR while running compiler: stderr: Fortran diagnostic messages: program name(main) jwd2006i-i "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.F", line 3: 'i' is declared but never referenced. jwd2006i-i "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.F", line 4: 'd' is declared but never referenced. Source: program main integer(kind=selected_int_kind(10)) i real(kind=selected_real_kind(10)) d end Defined "USE_FORTRANKIND" to "1" Popping language FC ================================================================================ TEST checkConst from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:150) TESTING: checkConst from config.types(config/BuildSystem/config/types.py:150) Checks for working const, and if not found defines it to empty string Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c", line 25: warning: variable "x" is used before its value is set if (x[0]); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c", line 30: warning: variable "t" is used before its value is set *t++ = 0; ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c", line 46: warning: variable "b" is used before its value is set struct s *b; b->j = 5; ^ Source: #include "confdefs.h" #include "conffix.h" int main() { /* Ultrix mips cc rejects this. */ typedef int charset[2]; const charset x; /* SunOS 4.1.1 cc rejects this. */ char const *const *ccp; char **p; /* NEC SVR4.0.2 mips cc rejects this. */ struct point {int x, y;}; static struct point const zero = {0,0}; /* AIX XL C 1.02.0.0 rejects this. It does not let you subtract one const X* pointer from another in an arm of an if-expression whose if-part is not a constant expression */ const char *g = "string"; ccp = &g + (g ? g-g : 0); /* HPUX 7.0 cc rejects these. */ ++ccp; p = (char**) ccp; ccp = (char const *const *) p; /* This section avoids unused variable warnings */ if (zero.x); if (x[0]); { /* SCO 3.2v4 cc rejects this. */ char *t; char const *s = 0 ? (char *) 0 : (char const *) 0; *t++ = 0; if (*s); } { /* Someone thinks the Sun supposedly-ANSI compiler will reject this. */ int x[] = {25, 17}; const int *foo = &x[0]; ++foo; } { /* Sun SC1.0 ANSI compiler rejects this -- but not the above. */ typedef const int *iptr; iptr p = 0; ++p; } { /* AIX XL C 1.02.0.0 rejects this saying "k.c", line 2.27: 1506-025 (S) Operand must be a modifiable lvalue. */ struct s { int j; const int *ap[3]; }; struct s *b; b->j = 5; } { /* ULTRIX-32 V3.1 (Rev 9) vcc rejects this */ const int foo = 10; /* Get rid of unused variable warning */ if (foo); } ; return 0; } ================================================================================ TEST checkEndian from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:206) TESTING: checkEndian from config.types(config/BuildSystem/config/types.py:206) If the machine is big endian, defines WORDS_BIGENDIAN Defined "WORDS_BIGENDIAN" to "1" ================================================================================ TEST checkSizeof from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:259) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:259) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: char Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(char)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Popping language C Defined "SIZEOF_CHAR" to "1" ================================================================================ TEST checkSizeof from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:259) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:259) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: void * Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(void *)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Popping language C Defined "SIZEOF_VOID_P" to "8" ================================================================================ TEST checkSizeof from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:259) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:259) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: short Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(short)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Popping language C Defined "SIZEOF_SHORT" to "2" ================================================================================ TEST checkSizeof from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:259) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:259) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: int Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(int)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Popping language C Defined "SIZEOF_INT" to "4" ================================================================================ TEST checkSizeof from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:259) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:259) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: long Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(long)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Popping language C Defined "SIZEOF_LONG" to "8" ================================================================================ TEST checkSizeof from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:259) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:259) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: long long Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(long long)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Popping language C Defined "SIZEOF_LONG_LONG" to "8" ================================================================================ TEST checkSizeof from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:259) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:259) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: float Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(float)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Popping language C Defined "SIZEOF_FLOAT" to "4" ================================================================================ TEST checkSizeof from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:259) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:259) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: double Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(double)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Popping language C Defined "SIZEOF_DOUBLE" to "8" ================================================================================ TEST checkSizeof from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:259) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:259) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: size_t Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(size_t)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Popping language C Defined "SIZEOF_SIZE_T" to "8" ================================================================================ TEST checkBitsPerByte from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:310) TESTING: checkBitsPerByte from config.types(config/BuildSystem/config/types.py:310) Determine the nubmer of bits per byte and define BITS_PER_BYTE Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #if STDC_HEADERS #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); char val[2]; int i = 0; if (!f) exit(1); val[0]='\1'; val[1]='\0'; while(val[0]) {val[0] <<= 1; i++;} fprintf(f, "%d\n", i); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Defined "BITS_PER_BYTE" to "8" ================================================================================ TEST checkVisibility from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:356) TESTING: checkVisibility from config.types(config/BuildSystem/config/types.py:356) ================================================================================ TEST configureMemAlign from PETSc.options.memAlign(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/memAlign.py:30) TESTING: configureMemAlign from PETSc.options.memAlign(config/PETSc/options/memAlign.py:30) Choose alignment Defined "MEMALIGN" to "16" Memory alignment is 16 ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [socket] in library ['socket', 'nsl'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char socket(); static void _check_socket() { socket(); } int main() { _check_socket();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -lsocket -lnsl -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lsocket Popping language C ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [handle_sigfpes] in library ['fpe'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char handle_sigfpes(); static void _check_handle_sigfpes() { handle_sigfpes(); } int main() { _check_handle_sigfpes();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -lfpe -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lfpe Popping language C ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [socket] in library ['socket', 'nsl'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char socket(); static void _check_socket() { socket(); } int main() { _check_socket();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -lsocket -lnsl -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lsocket Popping language C ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [handle_sigfpes] in library ['fpe'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char handle_sigfpes(); static void _check_handle_sigfpes() { handle_sigfpes(); } int main() { _check_handle_sigfpes();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -lfpe -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lfpe Popping language C ================================================================================ TEST checkMath from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:251) TESTING: checkMath from config.libraries(config/BuildSystem/config/libraries.py:251) Check for sin() in libm, the math library Checking for functions [sin floor log10 pow] in library [''] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c", line 5: warning: variable "y" was set but never used static void _check_sin() { double x = 0,y; y = sin(x); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c", line 8: warning: variable "y" was set but never used static void _check_floor() { double x = 0,y; y = floor(x); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c", line 11: warning: variable "y" was set but never used static void _check_log10() { double x = 0,y; y = log10(x); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c", line 14: warning: variable "y" was set but never used static void _check_pow() { double x = 0,y ; y = pow(x, x); ^ Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double sin(double); static void _check_sin() { double x = 0,y; y = sin(x); ; } double floor(double); static void _check_floor() { double x = 0,y; y = floor(x); ; } double log10(double); static void _check_log10() { double x = 0,y; y = log10(x); ; } double pow(double, double); static void _check_pow() { double x = 0,y ; y = pow(x, x); ; } int main() { _check_sin(); _check_floor(); _check_log10(); _check_pow();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Math functions are linked in by default ================================================================================ TEST checkMathErf from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:267) TESTING: checkMathErf from config.libraries(config/BuildSystem/config/libraries.py:267) Check for erf() in libm, the math library Checking for functions [erf] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c", line 5: warning: variable "y" was set but never used static void _check_erf() { double x = 0,y; y = erf(x); ^ Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double erf(double); static void _check_erf() { double x = 0,y; y = erf(x); ; } int main() { _check_erf();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C erf() found Defined "HAVE_ERF" to "1" ================================================================================ TEST checkMathTgamma from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:276) TESTING: checkMathTgamma from config.libraries(config/BuildSystem/config/libraries.py:276) Check for tgama() in libm, the math library Checking for functions [tgamma] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c", line 5: warning: variable "y" was set but never used static void _check_tgamma() { double x = 0,y; y = tgamma(x); ^ Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double tgamma(double); static void _check_tgamma() { double x = 0,y; y = tgamma(x); ; } int main() { _check_tgamma();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C tgamma() found Defined "HAVE_TGAMMA" to "1" ================================================================================ TEST checkMathFenv from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:285) TESTING: checkMathFenv from config.libraries(config/BuildSystem/config/libraries.py:285) Checks if can be used with FE_DFL_ENV Checking for functions [fesetenv] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_fesetenv() { fesetenv(FE_DFL_ENV);; } int main() { _check_fesetenv();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Defined "HAVE_FENV_H" to "1" ================================================================================ TEST checkMathLog2 from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:293) TESTING: checkMathLog2 from config.libraries(config/BuildSystem/config/libraries.py:293) Check for log2() in libm, the math library Checking for functions [log2] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c", line 5: warning: variable "y" was set but never used static void _check_log2() { double x = 1,y; y = log2(x); ^ Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double log2(double); static void _check_log2() { double x = 1,y; y = log2(x); ; } int main() { _check_log2();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C log2() found Defined "HAVE_LOG2" to "1" ================================================================================ TEST checkCompression from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:302) TESTING: checkCompression from config.libraries(config/BuildSystem/config/libraries.py:302) Check for libz, the compression library Checking for functions [compress uncompress] in library [''] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c", line 5: warning: variable "ret" was set but never used static void _check_compress() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = compress(dest, &destLen, source, sourceLen); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c", line 8: warning: variable "ret" was set but never used static void _check_uncompress() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = uncompress(dest, &destLen, source, sourceLen); ^ Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ int compress(char *dest, unsigned long *destLen, const char *source, unsigned long sourceLen); static void _check_compress() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = compress(dest, &destLen, source, sourceLen); ; } int uncompress(char *dest, unsigned long *destLen, const char *source, unsigned long sourceLen); static void _check_uncompress() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = uncompress(dest, &destLen, source, sourceLen); ; } int main() { _check_compress(); _check_uncompress();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o: In function `_check_compress': conftest.c:(.text+0x48): undefined reference to `compress' /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o: In function `_check_uncompress': conftest.c:(.text+0xa8): undefined reference to `uncompress' Popping language C Checking for functions [compress uncompress] in library ['z'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c", line 5: warning: variable "ret" was set but never used static void _check_compress() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = compress(dest, &destLen, source, sourceLen); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c", line 8: warning: variable "ret" was set but never used static void _check_uncompress() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = uncompress(dest, &destLen, source, sourceLen); ^ Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ int compress(char *dest, unsigned long *destLen, const char *source, unsigned long sourceLen); static void _check_compress() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = compress(dest, &destLen, source, sourceLen); ; } int uncompress(char *dest, unsigned long *destLen, const char *source, unsigned long sourceLen); static void _check_uncompress() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = uncompress(dest, &destLen, source, sourceLen); ; } int main() { _check_compress(); _check_uncompress();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -lz -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_LIBZ" to "1" Popping language C Using libz for the compression library ================================================================================ TEST checkRealtime from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:323) TESTING: checkRealtime from config.libraries(config/BuildSystem/config/libraries.py:323) Check for presence of clock_gettime() in realtime library (POSIX Realtime extensions) Checking for functions [clock_gettime] in library [''] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_clock_gettime() { struct timespec tp; clock_gettime(CLOCK_REALTIME,&tp);; } int main() { _check_clock_gettime();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C realtime functions are linked in by default ================================================================================ TEST checkDynamic from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:339) TESTING: checkDynamic from config.libraries(config/BuildSystem/config/libraries.py:339) Check for the header and libraries necessary for dynamic library manipulation Checking for functions [dlopen] in library ['dl'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dlopen(); static void _check_dlopen() { dlopen(); } int main() { _check_dlopen();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ldl -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_LIBDL" to "1" Popping language C Checking for header: dlfcn.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/dlfcn.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/dlfcn.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 27 "/usr/include/dlfcn.h" #line 1 "/usr/include/bits/dlfcn.h" #line 30 "/usr/include/dlfcn.h" #line 52 "/usr/include/dlfcn.h" extern void *dlopen (const char *__file, int __mode) ; extern int dlclose (void *__handle) ; extern void *dlsym (void * __handle, const char * __name) ; #line 80 "/usr/include/dlfcn.h" extern char *dlerror (void) ; #line 188 "/usr/include/dlfcn.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_DLFCN_H" to "1" ================================================================================ TEST configureLibraryOptions from PETSc.options.libraryOptions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/libraryOptions.py:37) TESTING: configureLibraryOptions from PETSc.options.libraryOptions(config/PETSc/options/libraryOptions.py:37) Sets PETSC_USE_DEBUG, PETSC_USE_INFO, PETSC_USE_LOG, PETSC_USE_CTABLE and PETSC_USE_FORTRAN_KERNELS Defined "USE_LOG" to "1" Defined "USE_DEBUG" to "1" Defined "USE_INFO" to "1" Defined "USE_CTABLE" to "1" **********Checking if running on BGL/IBM detected Checking for functions [bgl_perfctr_void] in library [''] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char bgl_perfctr_void(); static void _check_bgl_perfctr_void() { bgl_perfctr_void(); } int main() { _check_bgl_perfctr_void();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o: In function `_check_bgl_perfctr_void': conftest.c:(.text+0x4): undefined reference to `bgl_perfctr_void' Popping language C Checking for functions [ADIOI_BGL_Open] in library [''] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ADIOI_BGL_Open(); static void _check_ADIOI_BGL_Open() { ADIOI_BGL_Open(); } int main() { _check_ADIOI_BGL_Open();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o: In function `_check_ADIOI_BGL_Open': conftest.c:(.text+0x4): undefined reference to `ADIOI_BGL_Open' Popping language C *********BGL/IBM test failure Defined "USE_BACKWARD_LOOP" to "1" Defined "Alignx(a,b)" to " " ================================================================================ TEST configureISColorValueType from PETSc.options.libraryOptions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/libraryOptions.py:87) TESTING: configureISColorValueType from PETSc.options.libraryOptions(config/PETSc/options/libraryOptions.py:87) Sets PETSC_IS_COLOR_VALUE_TYPE, MPIU_COLORING_VALUE, IS_COLORING_MAX required by ISColor Defined "MPIU_COLORING_VALUE" to "MPI_UNSIGNED_SHORT" Defined "IS_COLORING_MAX" to "65535" Defined "IS_COLOR_VALUE_TYPE" to "short" Defined "IS_COLOR_VALUE_TYPE_SIZE" to "PETSC_SIZEOF_SHORT" ================================================================================ TEST configureCPURelax from config.atomics(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/atomics.py:17) TESTING: configureCPURelax from config.atomics(config/BuildSystem/config/atomics.py:17) Definitions for cpu relax assembly instructions All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics/conftest.c Possible ERROR while running compiler: exit code 256 stderr: .//FCCpMjRiH.s: Assembler messages: .//FCCpMjRiH.s:15: Error: Unknown opcode: `rep' Source: #include "confdefs.h" #include "conffix.h" int main() { asm volatile("rep; nop" ::: "memory");; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics/conftest.c Possible ERROR while running compiler: exit code 512 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics/conftest.c", line 5: error: identifier "HMT_low" is undefined do { HMT_low; HMT_medium; __asm__ __volatile__ ("":::"memory"); } while (0); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics/conftest.c", line 5: error: identifier "HMT_medium" is undefined do { HMT_low; HMT_medium; __asm__ __volatile__ ("":::"memory"); } while (0); ^ 2 errors detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics/conftest.c". Source: #include "confdefs.h" #include "conffix.h" int main() { do { HMT_low; HMT_medium; __asm__ __volatile__ ("":::"memory"); } while (0); return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { __asm__ __volatile__ ("":::"memory");; return 0; } Defined "CPU_RELAX()" to "__asm__ __volatile__ ("":::"memory")" ================================================================================ TEST configureMemoryBarriers from config.atomics(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/atomics.py:36) TESTING: configureMemoryBarriers from config.atomics(config/BuildSystem/config/atomics.py:36) Definitions for memory barrier instructions Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics/conftest.c Possible ERROR while running compiler: exit code 256 stderr: .//FCCCrePQf.s: Assembler messages: .//FCCCrePQf.s:15: Error: Unknown opcode: `mfence' Source: #include "confdefs.h" #include "conffix.h" int main() { asm volatile("mfence":::"memory"); return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics/conftest.c Possible ERROR while running compiler: exit code 256 stderr: .//FCCyVCPFq.s: Assembler messages: .//FCCyVCPFq.s:15: Error: Unknown opcode: `lfence' Source: #include "confdefs.h" #include "conffix.h" int main() { asm volatile("lfence":::"memory"); return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics/conftest.c Possible ERROR while running compiler: exit code 256 stderr: .//FCCshCCwG.s: Assembler messages: .//FCCshCCwG.s:15: Error: Unknown opcode: `sfence' Source: #include "confdefs.h" #include "conffix.h" int main() { asm volatile("sfence":::"memory"); return 0; } ================================================================================ TEST checkMemcmp from config.functions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/functions.py:110) TESTING: checkMemcmp from config.functions(config/BuildSystem/config/functions.py:110) Check for 8-bit clean memcmp Making executable to test memcmp() All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include void exit(int); int main() { char c0 = 0x40; char c1 = (char) 0x80; char c2 = (char) 0x81; exit(memcmp(&c0, &c2, 1) < 0 && memcmp(&c1, &c2, 1) < 0 ? 0 : 1); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest ================================================================================ TEST checkSysinfo from config.functions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/functions.py:135) TESTING: checkSysinfo from config.functions(config/BuildSystem/config/functions.py:135) Check whether sysinfo takes three arguments, and if it does define HAVE_SYSINFO_3ARG Checking for functions [sysinfo] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sysinfo(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_sysinfo) || defined (__stub___sysinfo) sysinfo_will_always_fail_with_ENOSYS(); #else sysinfo(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_SYSINFO" to "1" Checking for header: linux/kernel.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/linux/kernel.h" struct sysinfo { long uptime; unsigned long loads[3]; unsigned long totalram; unsigned long freeram; unsigned long sharedram; unsigned long bufferram; unsigned long totalswap; unsigned long freeswap; unsigned short procs; unsigned short pad; unsigned long totalhigh; unsigned long freehigh; unsigned int mem_unit; char _f[20-2*sizeof(long)-sizeof(int)]; }; #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_LINUX_KERNEL_H" to "1" Checking for header: sys/sysinfo.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/sys/sysinfo.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/sys/sysinfo.h" #line 1 "/usr/include/linux/kernel.h" struct sysinfo { long uptime; unsigned long loads[3]; unsigned long totalram; unsigned long freeram; unsigned long sharedram; unsigned long bufferram; unsigned long totalswap; unsigned long freeswap; unsigned short procs; unsigned short pad; unsigned long totalhigh; unsigned long freehigh; unsigned int mem_unit; char _f[20-2*sizeof(long)-sizeof(int)]; }; #line 26 "/usr/include/sys/sysinfo.h" extern int sysinfo (struct sysinfo *__info) ; extern int get_nprocs_conf (void) ; extern int get_nprocs (void) ; extern long int get_phys_pages (void) ; extern long int get_avphys_pages (void) ; #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_SYSINFO_H" to "1" Checking for header: sys/systeminfo.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "sys/systeminfo.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "sys/systeminfo.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "sys/systeminfo.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c".: Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c", line 13: catastrophic error: #error directive: "Cannot check sysinfo without special headers" # error "Cannot check sysinfo without special headers" ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" #ifdef HAVE_LINUX_KERNEL_H # include # include # ifdef HAVE_SYS_SYSINFO_H # include # endif #elif defined(HAVE_SYS_SYSTEMINFO_H) # include #else # error "Cannot check sysinfo without special headers" #endif int main() { char buf[10]; long count=10; sysinfo(1, buf, count); ; return 0; } Compile failed inside link ================================================================================ TEST checkVPrintf from config.functions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/functions.py:158) TESTING: checkVPrintf from config.functions(config/BuildSystem/config/functions.py:158) Checks whether vprintf requires a char * last argument, and if it does defines HAVE_VPRINTF_CHAR Checking for functions [vprintf] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char vprintf(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_vprintf) || defined (__stub___vprintf) vprintf_will_always_fail_with_ENOSYS(); #else vprintf(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_VPRINTF" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c", line 8: warning: variable "Argp" is used before its value is set vprintf( "%d", Argp ); ^ Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { va_list Argp; vprintf( "%d", Argp ); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl ================================================================================ TEST checkVFPrintf from config.functions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/functions.py:165) TESTING: checkVFPrintf from config.functions(config/BuildSystem/config/functions.py:165) Checks whether vfprintf requires a char * last argument, and if it does defines HAVE_VFPRINTF_CHAR Checking for functions [vfprintf] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char vfprintf(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_vfprintf) || defined (__stub___vfprintf) vfprintf_will_always_fail_with_ENOSYS(); #else vfprintf(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_VFPRINTF" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c", line 8: warning: variable "Argp" is used before its value is set vfprintf(stdout, "%d", Argp ); ^ Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { va_list Argp; vfprintf(stdout, "%d", Argp ); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl ================================================================================ TEST checkVSNPrintf from config.functions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/functions.py:172) TESTING: checkVSNPrintf from config.functions(config/BuildSystem/config/functions.py:172) Checks whether vsnprintf requires a char * last argument, and if it does defines HAVE_VSNPRINTF_CHAR Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { _vsnprintf(0,0,0,0); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o: In function `main': conftest.c:(.text+0x34): undefined reference to `_vsnprintf' Checking for functions [vsnprintf] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char vsnprintf(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_vsnprintf) || defined (__stub___vsnprintf) vsnprintf_will_always_fail_with_ENOSYS(); #else vsnprintf(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_VSNPRINTF" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c", line 8: warning: variable "Argp" is used before its value is set vsnprintf(str,5, "%d", Argp ); ^ Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { va_list Argp;char str[6]; vsnprintf(str,5, "%d", Argp ); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl ================================================================================ TEST checkNanosleep from config.functions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/functions.py:206) TESTING: checkNanosleep from config.functions(config/BuildSystem/config/functions.py:206) Check for functional nanosleep() - as time.h behaves differently for different compiler flags - like -std=c89 Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { struct timespec tp; tp.tv_sec = 0; tp.tv_nsec = (long)(1e9); nanosleep(&tp,0); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_NANOSLEEP" to "1" ================================================================================ TEST checkSignalHandlerType from config.functions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/functions.py:182) TESTING: checkSignalHandlerType from config.functions(config/BuildSystem/config/functions.py:182) Checks the type of C++ signals handlers, and defines SIGNAL_CAST to the correct value Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include static void myhandler(int sig) {} int main() { signal(SIGFPE,myhandler); ; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "SIGNAL_CAST" to " " Popping language Cxx ================================================================================ TEST checkFreeReturnType from config.functions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/functions.py:192) TESTING: checkFreeReturnType from config.functions(config/BuildSystem/config/functions.py:192) Checks whether free returns void or int, and defines HAVE_FREE_RETURN_INT Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Possible ERROR while running compiler: exit code 512 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c", line 6: warning: variable "p" is used before its value is set int ierr; void *p; ierr = free(p); return 0; ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c", line 6: error: a value of type "void" cannot be assigned to an entity of type "int" int ierr; void *p; ierr = free(p); return 0; ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c", line 8: warning: statement is unreachable return 0; ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c", line 6: warning: variable "ierr" was set but never used int ierr; void *p; ierr = free(p); return 0; ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include int main() { int ierr; void *p; ierr = free(p); return 0; ; return 0; } Compile failed inside link ================================================================================ TEST checkVariableArgumentLists from config.functions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/functions.py:198) TESTING: checkVariableArgumentLists from config.functions(config/BuildSystem/config/functions.py:198) Checks whether the variable argument list functionality is working Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c", line 7: warning: variable "l2" is used before its value is set va_copy(l1, l2); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c", line 10: warning: statement is unreachable return 0; ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c", line 6: warning: variable "l1" was set but never used va_list l1, l2; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { va_list l1, l2; va_copy(l1, l2); return 0; ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_VA_COPY" to "1" ================================================================================ TEST checkClassify from config.functions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/functions.py:89) TESTING: checkClassify from config.functions(config/BuildSystem/config/functions.py:89) Recursive decompose to rapidly classify functions as found or missing To confirm that a function is missing, we require a compile/link failure with only that function in a compilation unit. In contrast, we can confirm that many functions are present by compiling them all together in a large compilation unit. We optimistically compile everything together, then trim all functions that were named in the error message and bisect the result. The trimming is only an optimization to increase the likelihood of a big-batch compile succeeding; we do not rely on the compiler naming missing functions. Checking for functions [rand getdomainname _sleep snprintf realpath dlsym bzero _getcwd getwd uname _lseek sleep _access lseek usleep dlclose gethostname clock get_nprocs access _snprintf dlerror mkstemp fork getpagesize sbreak memalign sigset getcwd gethostbyname gettimeofday readlink _set_output_format PXFGETARG sigaction strcasecmp dlopen drand48 socket memmove signal popen getrusage times time sysctlbyname stricmp] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char rand(); char getdomainname(); char _sleep(); char snprintf(); char realpath(); char dlsym(); char bzero(); char _getcwd(); char getwd(); char uname(); char _lseek(); char sleep(); char _access(); char lseek(); char usleep(); char dlclose(); char gethostname(); char clock(); char get_nprocs(); char access(); char _snprintf(); char dlerror(); char mkstemp(); char fork(); char getpagesize(); char sbreak(); char memalign(); char sigset(); char getcwd(); char gethostbyname(); char gettimeofday(); char readlink(); char _set_output_format(); char PXFGETARG(); char sigaction(); char strcasecmp(); char dlopen(); char drand48(); char socket(); char memmove(); char signal(); char popen(); char getrusage(); char times(); char time(); char sysctlbyname(); char stricmp(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_rand) || defined (__stub___rand) rand_will_always_fail_with_ENOSYS(); #else rand(); #endif #if defined (__stub_getdomainname) || defined (__stub___getdomainname) getdomainname_will_always_fail_with_ENOSYS(); #else getdomainname(); #endif #if defined (__stub__sleep) || defined (__stub____sleep) _sleep_will_always_fail_with_ENOSYS(); #else _sleep(); #endif #if defined (__stub_snprintf) || defined (__stub___snprintf) snprintf_will_always_fail_with_ENOSYS(); #else snprintf(); #endif #if defined (__stub_realpath) || defined (__stub___realpath) realpath_will_always_fail_with_ENOSYS(); #else realpath(); #endif #if defined (__stub_dlsym) || defined (__stub___dlsym) dlsym_will_always_fail_with_ENOSYS(); #else dlsym(); #endif #if defined (__stub_bzero) || defined (__stub___bzero) bzero_will_always_fail_with_ENOSYS(); #else bzero(); #endif #if defined (__stub__getcwd) || defined (__stub____getcwd) _getcwd_will_always_fail_with_ENOSYS(); #else _getcwd(); #endif #if defined (__stub_getwd) || defined (__stub___getwd) getwd_will_always_fail_with_ENOSYS(); #else getwd(); #endif #if defined (__stub_uname) || defined (__stub___uname) uname_will_always_fail_with_ENOSYS(); #else uname(); #endif #if defined (__stub__lseek) || defined (__stub____lseek) _lseek_will_always_fail_with_ENOSYS(); #else _lseek(); #endif #if defined (__stub_sleep) || defined (__stub___sleep) sleep_will_always_fail_with_ENOSYS(); #else sleep(); #endif #if defined (__stub__access) || defined (__stub____access) _access_will_always_fail_with_ENOSYS(); #else _access(); #endif #if defined (__stub_lseek) || defined (__stub___lseek) lseek_will_always_fail_with_ENOSYS(); #else lseek(); #endif #if defined (__stub_usleep) || defined (__stub___usleep) usleep_will_always_fail_with_ENOSYS(); #else usleep(); #endif #if defined (__stub_dlclose) || defined (__stub___dlclose) dlclose_will_always_fail_with_ENOSYS(); #else dlclose(); #endif #if defined (__stub_gethostname) || defined (__stub___gethostname) gethostname_will_always_fail_with_ENOSYS(); #else gethostname(); #endif #if defined (__stub_clock) || defined (__stub___clock) clock_will_always_fail_with_ENOSYS(); #else clock(); #endif #if defined (__stub_get_nprocs) || defined (__stub___get_nprocs) get_nprocs_will_always_fail_with_ENOSYS(); #else get_nprocs(); #endif #if defined (__stub_access) || defined (__stub___access) access_will_always_fail_with_ENOSYS(); #else access(); #endif #if defined (__stub__snprintf) || defined (__stub____snprintf) _snprintf_will_always_fail_with_ENOSYS(); #else _snprintf(); #endif #if defined (__stub_dlerror) || defined (__stub___dlerror) dlerror_will_always_fail_with_ENOSYS(); #else dlerror(); #endif #if defined (__stub_mkstemp) || defined (__stub___mkstemp) mkstemp_will_always_fail_with_ENOSYS(); #else mkstemp(); #endif #if defined (__stub_fork) || defined (__stub___fork) fork_will_always_fail_with_ENOSYS(); #else fork(); #endif #if defined (__stub_getpagesize) || defined (__stub___getpagesize) getpagesize_will_always_fail_with_ENOSYS(); #else getpagesize(); #endif #if defined (__stub_sbreak) || defined (__stub___sbreak) sbreak_will_always_fail_with_ENOSYS(); #else sbreak(); #endif #if defined (__stub_memalign) || defined (__stub___memalign) memalign_will_always_fail_with_ENOSYS(); #else memalign(); #endif #if defined (__stub_sigset) || defined (__stub___sigset) sigset_will_always_fail_with_ENOSYS(); #else sigset(); #endif #if defined (__stub_getcwd) || defined (__stub___getcwd) getcwd_will_always_fail_with_ENOSYS(); #else getcwd(); #endif #if defined (__stub_gethostbyname) || defined (__stub___gethostbyname) gethostbyname_will_always_fail_with_ENOSYS(); #else gethostbyname(); #endif #if defined (__stub_gettimeofday) || defined (__stub___gettimeofday) gettimeofday_will_always_fail_with_ENOSYS(); #else gettimeofday(); #endif #if defined (__stub_readlink) || defined (__stub___readlink) readlink_will_always_fail_with_ENOSYS(); #else readlink(); #endif #if defined (__stub__set_output_format) || defined (__stub____set_output_format) _set_output_format_will_always_fail_with_ENOSYS(); #else _set_output_format(); #endif #if defined (__stub_PXFGETARG) || defined (__stub___PXFGETARG) PXFGETARG_will_always_fail_with_ENOSYS(); #else PXFGETARG(); #endif #if defined (__stub_sigaction) || defined (__stub___sigaction) sigaction_will_always_fail_with_ENOSYS(); #else sigaction(); #endif #if defined (__stub_strcasecmp) || defined (__stub___strcasecmp) strcasecmp_will_always_fail_with_ENOSYS(); #else strcasecmp(); #endif #if defined (__stub_dlopen) || defined (__stub___dlopen) dlopen_will_always_fail_with_ENOSYS(); #else dlopen(); #endif #if defined (__stub_drand48) || defined (__stub___drand48) drand48_will_always_fail_with_ENOSYS(); #else drand48(); #endif #if defined (__stub_socket) || defined (__stub___socket) socket_will_always_fail_with_ENOSYS(); #else socket(); #endif #if defined (__stub_memmove) || defined (__stub___memmove) memmove_will_always_fail_with_ENOSYS(); #else memmove(); #endif #if defined (__stub_signal) || defined (__stub___signal) signal_will_always_fail_with_ENOSYS(); #else signal(); #endif #if defined (__stub_popen) || defined (__stub___popen) popen_will_always_fail_with_ENOSYS(); #else popen(); #endif #if defined (__stub_getrusage) || defined (__stub___getrusage) getrusage_will_always_fail_with_ENOSYS(); #else getrusage(); #endif #if defined (__stub_times) || defined (__stub___times) times_will_always_fail_with_ENOSYS(); #else times(); #endif #if defined (__stub_time) || defined (__stub___time) time_will_always_fail_with_ENOSYS(); #else time(); #endif #if defined (__stub_sysctlbyname) || defined (__stub___sysctlbyname) sysctlbyname_will_always_fail_with_ENOSYS(); #else sysctlbyname(); #endif #if defined (__stub_stricmp) || defined (__stub___stricmp) stricmp_will_always_fail_with_ENOSYS(); #else stricmp(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o: In function `main': conftest.c:(.text+0x64): warning: the `getwd' function is dangerous and should not be used. conftest.c:(.text+0x1c): undefined reference to `_sleep' conftest.c:(.text+0x58): undefined reference to `_getcwd' conftest.c:(.text+0x7c): undefined reference to `_lseek' conftest.c:(.text+0x94): undefined reference to `_access' conftest.c:(.text+0xf4): undefined reference to `_snprintf' conftest.c:(.text+0x130): undefined reference to `sbreak' conftest.c:(.text+0x184): undefined reference to `_set_output_format' conftest.c:(.text+0x190): undefined reference to `PXFGETARG' conftest.c:(.text+0x220): undefined reference to `sysctlbyname' conftest.c:(.text+0x22c): undefined reference to `stricmp' Checking for functions [rand getdomainname realpath dlsym bzero uname usleep dlclose gethostname clock get_nprocs dlerror mkstemp fork getpagesize] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char rand(); char getdomainname(); char realpath(); char dlsym(); char bzero(); char uname(); char usleep(); char dlclose(); char gethostname(); char clock(); char get_nprocs(); char dlerror(); char mkstemp(); char fork(); char getpagesize(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_rand) || defined (__stub___rand) rand_will_always_fail_with_ENOSYS(); #else rand(); #endif #if defined (__stub_getdomainname) || defined (__stub___getdomainname) getdomainname_will_always_fail_with_ENOSYS(); #else getdomainname(); #endif #if defined (__stub_realpath) || defined (__stub___realpath) realpath_will_always_fail_with_ENOSYS(); #else realpath(); #endif #if defined (__stub_dlsym) || defined (__stub___dlsym) dlsym_will_always_fail_with_ENOSYS(); #else dlsym(); #endif #if defined (__stub_bzero) || defined (__stub___bzero) bzero_will_always_fail_with_ENOSYS(); #else bzero(); #endif #if defined (__stub_uname) || defined (__stub___uname) uname_will_always_fail_with_ENOSYS(); #else uname(); #endif #if defined (__stub_usleep) || defined (__stub___usleep) usleep_will_always_fail_with_ENOSYS(); #else usleep(); #endif #if defined (__stub_dlclose) || defined (__stub___dlclose) dlclose_will_always_fail_with_ENOSYS(); #else dlclose(); #endif #if defined (__stub_gethostname) || defined (__stub___gethostname) gethostname_will_always_fail_with_ENOSYS(); #else gethostname(); #endif #if defined (__stub_clock) || defined (__stub___clock) clock_will_always_fail_with_ENOSYS(); #else clock(); #endif #if defined (__stub_get_nprocs) || defined (__stub___get_nprocs) get_nprocs_will_always_fail_with_ENOSYS(); #else get_nprocs(); #endif #if defined (__stub_dlerror) || defined (__stub___dlerror) dlerror_will_always_fail_with_ENOSYS(); #else dlerror(); #endif #if defined (__stub_mkstemp) || defined (__stub___mkstemp) mkstemp_will_always_fail_with_ENOSYS(); #else mkstemp(); #endif #if defined (__stub_fork) || defined (__stub___fork) fork_will_always_fail_with_ENOSYS(); #else fork(); #endif #if defined (__stub_getpagesize) || defined (__stub___getpagesize) getpagesize_will_always_fail_with_ENOSYS(); #else getpagesize(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_RAND" to "1" Defined "HAVE_GETDOMAINNAME" to "1" Defined "HAVE_REALPATH" to "1" Defined "HAVE_DLSYM" to "1" Defined "HAVE_BZERO" to "1" Defined "HAVE_UNAME" to "1" Defined "HAVE_USLEEP" to "1" Defined "HAVE_DLCLOSE" to "1" Defined "HAVE_GETHOSTNAME" to "1" Defined "HAVE_CLOCK" to "1" Defined "HAVE_GET_NPROCS" to "1" Defined "HAVE_DLERROR" to "1" Defined "HAVE_MKSTEMP" to "1" Defined "HAVE_FORK" to "1" Defined "HAVE_GETPAGESIZE" to "1" Checking for functions [memalign sigset gethostbyname gettimeofday readlink sigaction strcasecmp dlopen drand48 socket memmove signal popen getrusage times time] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char memalign(); char sigset(); char gethostbyname(); char gettimeofday(); char readlink(); char sigaction(); char strcasecmp(); char dlopen(); char drand48(); char socket(); char memmove(); char signal(); char popen(); char getrusage(); char times(); char time(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_memalign) || defined (__stub___memalign) memalign_will_always_fail_with_ENOSYS(); #else memalign(); #endif #if defined (__stub_sigset) || defined (__stub___sigset) sigset_will_always_fail_with_ENOSYS(); #else sigset(); #endif #if defined (__stub_gethostbyname) || defined (__stub___gethostbyname) gethostbyname_will_always_fail_with_ENOSYS(); #else gethostbyname(); #endif #if defined (__stub_gettimeofday) || defined (__stub___gettimeofday) gettimeofday_will_always_fail_with_ENOSYS(); #else gettimeofday(); #endif #if defined (__stub_readlink) || defined (__stub___readlink) readlink_will_always_fail_with_ENOSYS(); #else readlink(); #endif #if defined (__stub_sigaction) || defined (__stub___sigaction) sigaction_will_always_fail_with_ENOSYS(); #else sigaction(); #endif #if defined (__stub_strcasecmp) || defined (__stub___strcasecmp) strcasecmp_will_always_fail_with_ENOSYS(); #else strcasecmp(); #endif #if defined (__stub_dlopen) || defined (__stub___dlopen) dlopen_will_always_fail_with_ENOSYS(); #else dlopen(); #endif #if defined (__stub_drand48) || defined (__stub___drand48) drand48_will_always_fail_with_ENOSYS(); #else drand48(); #endif #if defined (__stub_socket) || defined (__stub___socket) socket_will_always_fail_with_ENOSYS(); #else socket(); #endif #if defined (__stub_memmove) || defined (__stub___memmove) memmove_will_always_fail_with_ENOSYS(); #else memmove(); #endif #if defined (__stub_signal) || defined (__stub___signal) signal_will_always_fail_with_ENOSYS(); #else signal(); #endif #if defined (__stub_popen) || defined (__stub___popen) popen_will_always_fail_with_ENOSYS(); #else popen(); #endif #if defined (__stub_getrusage) || defined (__stub___getrusage) getrusage_will_always_fail_with_ENOSYS(); #else getrusage(); #endif #if defined (__stub_times) || defined (__stub___times) times_will_always_fail_with_ENOSYS(); #else times(); #endif #if defined (__stub_time) || defined (__stub___time) time_will_always_fail_with_ENOSYS(); #else time(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_MEMALIGN" to "1" Defined "HAVE_SIGSET" to "1" Defined "HAVE_GETHOSTBYNAME" to "1" Defined "HAVE_GETTIMEOFDAY" to "1" Defined "HAVE_READLINK" to "1" Defined "HAVE_SIGACTION" to "1" Defined "HAVE_STRCASECMP" to "1" Defined "HAVE_DLOPEN" to "1" Defined "HAVE_DRAND48" to "1" Defined "HAVE_SOCKET" to "1" Defined "HAVE_MEMMOVE" to "1" Defined "HAVE_SIGNAL" to "1" Defined "HAVE_POPEN" to "1" Defined "HAVE_GETRUSAGE" to "1" Defined "HAVE_TIMES" to "1" Defined "HAVE_TIME" to "1" Checking for functions [_sleep] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _sleep(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__sleep) || defined (__stub____sleep) _sleep_will_always_fail_with_ENOSYS(); #else _sleep(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `_sleep' Checking for functions [snprintf] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char snprintf(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_snprintf) || defined (__stub___snprintf) snprintf_will_always_fail_with_ENOSYS(); #else snprintf(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_SNPRINTF" to "1" Checking for functions [_getcwd] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _getcwd(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__getcwd) || defined (__stub____getcwd) _getcwd_will_always_fail_with_ENOSYS(); #else _getcwd(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `_getcwd' Checking for functions [getwd] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getwd(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_getwd) || defined (__stub___getwd) getwd_will_always_fail_with_ENOSYS(); #else getwd(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): warning: the `getwd' function is dangerous and should not be used. Defined "HAVE_GETWD" to "1" Checking for functions [_lseek] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _lseek(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__lseek) || defined (__stub____lseek) _lseek_will_always_fail_with_ENOSYS(); #else _lseek(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `_lseek' Checking for functions [sleep] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sleep(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_sleep) || defined (__stub___sleep) sleep_will_always_fail_with_ENOSYS(); #else sleep(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_SLEEP" to "1" Checking for functions [_access] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _access(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__access) || defined (__stub____access) _access_will_always_fail_with_ENOSYS(); #else _access(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `_access' Checking for functions [lseek] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char lseek(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_lseek) || defined (__stub___lseek) lseek_will_always_fail_with_ENOSYS(); #else lseek(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_LSEEK" to "1" Checking for functions [access] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char access(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_access) || defined (__stub___access) access_will_always_fail_with_ENOSYS(); #else access(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_ACCESS" to "1" Checking for functions [_snprintf] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _snprintf(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__snprintf) || defined (__stub____snprintf) _snprintf_will_always_fail_with_ENOSYS(); #else _snprintf(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `_snprintf' Checking for functions [sbreak] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sbreak(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_sbreak) || defined (__stub___sbreak) sbreak_will_always_fail_with_ENOSYS(); #else sbreak(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `sbreak' Checking for functions [getcwd] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getcwd(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_getcwd) || defined (__stub___getcwd) getcwd_will_always_fail_with_ENOSYS(); #else getcwd(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_GETCWD" to "1" Checking for functions [_set_output_format] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _set_output_format(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__set_output_format) || defined (__stub____set_output_format) _set_output_format_will_always_fail_with_ENOSYS(); #else _set_output_format(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `_set_output_format' Checking for functions [PXFGETARG] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char PXFGETARG(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_PXFGETARG) || defined (__stub___PXFGETARG) PXFGETARG_will_always_fail_with_ENOSYS(); #else PXFGETARG(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `PXFGETARG' Checking for functions [sysctlbyname] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sysctlbyname(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_sysctlbyname) || defined (__stub___sysctlbyname) sysctlbyname_will_always_fail_with_ENOSYS(); #else sysctlbyname(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `sysctlbyname' Checking for functions [stricmp] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char stricmp(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_stricmp) || defined (__stub___stricmp) stricmp_will_always_fail_with_ENOSYS(); #else stricmp(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `stricmp' ================================================================================ TEST configureMemorySize from config.utilities.getResidentSetSize(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/getResidentSetSize.py:31) TESTING: configureMemorySize from config.utilities.getResidentSetSize(config/BuildSystem/config/utilities/getResidentSetSize.py:31) Try to determine how to measure the memory usage Defined "USE_PROC_FOR_SIZE" to "1" Using /proc for PetscMemoryGetCurrentUsage() ================================================================================ TEST configureFortranCommandLine from config.utilities.fortranCommandLine(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/fortranCommandLine.py:27) TESTING: configureFortranCommandLine from config.utilities.fortranCommandLine(config/BuildSystem/config/utilities/fortranCommandLine.py:27) Check for the mechanism to retrieve command line arguments in Fortran Pushing language FC Checking for functions [] in library [''] [] Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.F Possible ERROR while running compiler: stderr: Fortran diagnostic messages: program name(main) jwd2005i-w "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.F", line 4: 'i' is used but never set. Source: program main integer i character*(80) arg call get_command_argument(i,arg) end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language FC Defined "HAVE_FORTRAN_GET_COMMAND_ARGUMENT" to "1" Popping language FC Pushing language C Checking for functions [get_command_argument_] in library [''] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char get_command_argument_(); static void _check_get_command_argument_() { get_command_argument_(); } int main() { _check_get_command_argument_();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o: In function `_check_get_command_argument_': conftest.c:(.text+0x4): undefined reference to `get_command_argument_' Popping language C Checking for functions [getarg_] in library [''] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char getarg_(); static void _check_getarg_() { getarg_(); } int main() { _check_getarg_();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o: In function `_check_getarg_': conftest.c:(.text+0x4): undefined reference to `getarg_' Popping language C Checking for functions [ipxfargc_] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char ipxfargc_(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_ipxfargc_) || defined (__stub___ipxfargc_) ipxfargc__will_always_fail_with_ENOSYS(); #else ipxfargc_(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `ipxfargc_' Checking for functions [f90_unix_MP_iargc] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char f90_unix_MP_iargc(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_f90_unix_MP_iargc) || defined (__stub___f90_unix_MP_iargc) f90_unix_MP_iargc_will_always_fail_with_ENOSYS(); #else f90_unix_MP_iargc(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `f90_unix_MP_iargc' Checking for functions [PXFGETARG] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char PXFGETARG(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_PXFGETARG) || defined (__stub___PXFGETARG) PXFGETARG_will_always_fail_with_ENOSYS(); #else PXFGETARG(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `PXFGETARG' Checking for functions [iargc_] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char iargc_(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_iargc_) || defined (__stub___iargc_) iargc__will_always_fail_with_ENOSYS(); #else iargc_(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `iargc_' Checking for functions [GETARG at 16] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Possible ERROR while running compiler: exit code 512 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c", line 13: error: unrecognized token char GETARG at 16(); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c", line 13: error: expected a ";" char GETARG at 16(); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c", line 21: error: unrecognized token #if defined (__stub_GETARG at 16) || defined (__stub___GETARG at 16) ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c", line 21: error: expected a ")" #if defined (__stub_GETARG at 16) || defined (__stub___GETARG at 16) ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c", line 21: error: extra text after expected end of preprocessing directive #if defined (__stub_GETARG at 16) || defined (__stub___GETARG at 16) ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c", line 24: error: unrecognized token GETARG at 16(); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c", line 24: warning: expression has no effect GETARG at 16(); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c", line 24: error: expected a ";" GETARG at 16(); ^ 7 errors detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c". Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char GETARG at 16(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_GETARG at 16) || defined (__stub___GETARG at 16) GETARG at 16_will_always_fail_with_ENOSYS(); #else GETARG at 16(); #endif ; return 0; } Compile failed inside link Checking for functions [_gfortran_iargc] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _gfortran_iargc(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__gfortran_iargc) || defined (__stub____gfortran_iargc) _gfortran_iargc_will_always_fail_with_ENOSYS(); #else _gfortran_iargc(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `_gfortran_iargc' Popping language C ================================================================================ TEST configureFeatureTestMacros from config.utilities.featureTestMacros(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/featureTestMacros.py:13) TESTING: configureFeatureTestMacros from config.utilities.featureTestMacros(config/BuildSystem/config/utilities/featureTestMacros.py:13) Checks if certain feature test macros are support All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros/conftest.c", line 4: catastrophic error: cannot open source file "sysctl.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" #define _POSIX_C_SOURCE 200112L #include int main() { ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #define _BSD_SOURCE #include int main() { ; return 0; } Defined "_BSD_SOURCE" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #define _DEFAULT_SOURCE #include int main() { ; return 0; } Defined "_DEFAULT_SOURCE" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #define _GNU_SOURCE #include int main() { cpu_set_t mset; CPU_ZERO(&mset);; return 0; } Defined "_GNU_SOURCE" to "1" ================================================================================ TEST configureMissingDefines from config.utilities.missing(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/missing.py:57) TESTING: configureMissingDefines from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:57) Checks for limits All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_LIMITS_H #include #endif int main() { int i=INT_MAX; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_FLOAT_H #include #endif int main() { double d=DBL_MAX; if (d); ; return 0; } ================================================================================ TEST configureMissingUtypeTypedefs from config.utilities.missing(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/missing.py:67) TESTING: configureMissingUtypeTypedefs from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:67) Checks if u_short is undefined Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c", line 6: warning: variable "foo" was declared but never referenced u_short foo; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { u_short foo; ; return 0; } ================================================================================ TEST configureMissingFunctions from config.utilities.missing(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/missing.py:73) TESTING: configureMissingFunctions from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:73) Checks for SOCKETS ================================================================================ TEST configureMissingSignals from config.utilities.missing(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/missing.py:93) TESTING: configureMissingSignals from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:93) Check for missing signals, and define MISSING_ if necessary Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGABRT; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGALRM; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGBUS; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGCHLD; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGCONT; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGFPE; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGHUP; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGILL; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGINT; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGKILL; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGPIPE; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGQUIT; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGSEGV; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGSTOP; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGSYS; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGTERM; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGTRAP; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGTSTP; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGURG; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGUSR1; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGUSR2; if (i); ; return 0; } ================================================================================ TEST configureMissingGetdomainnamePrototype from config.utilities.missing(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/missing.py:110) TESTING: configureMissingGetdomainnamePrototype from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:110) Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #if !defined(_BSD_SOURCE) #define _BSD_SOURCE #endif #if !defined(_DEFAULT_SOURCE) #define _DEFAULT_SOURCE #endif #if !defined(_GNU_SOURCE) #define _GNU_SOURCE #endif #ifdef PETSC_HAVE_UNISTD_H #include #endif #ifdef PETSC_HAVE_NETDB_H #include #endif int main() { int (*getdomainname_ptr)(char*,size_t) = getdomainname; char test[10]; if (getdomainname_ptr(test,10)) return 1; ; return 0; } Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #if !defined(_BSD_SOURCE) #define _BSD_SOURCE #endif #if !defined(_DEFAULT_SOURCE) #define _DEFAULT_SOURCE #endif #if !defined(_GNU_SOURCE) #define _GNU_SOURCE #endif #ifdef PETSC_HAVE_UNISTD_H #include #endif #ifdef PETSC_HAVE_NETDB_H #include #endif int main() { int (*getdomainname_ptr)(char*,size_t) = getdomainname; char test[10]; if (getdomainname_ptr(test,10)) return 1; ; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language Cxx ================================================================================ TEST configureMissingSrandPrototype from config.utilities.missing(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/missing.py:135) TESTING: configureMissingSrandPrototype from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:135) Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #if !defined(_BSD_SOURCE) #define _BSD_SOURCE #endif #if !defined(_DEFAULT_SOURCE) #define _DEFAULT_SOURCE #endif #if !defined(_GNU_SOURCE) #define _GNU_SOURCE #endif #ifdef PETSC_HAVE_STDLIB_H #include #endif int main() { double (*drand48_ptr)(void) = drand48; void (*srand48_ptr)(long int) = srand48; long int seed=10; srand48_ptr(seed); if (drand48_ptr() > 0.5) return 1; ; return 0; } Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #if !defined(_BSD_SOURCE) #define _BSD_SOURCE #endif #if !defined(_DEFAULT_SOURCE) #define _DEFAULT_SOURCE #endif #if !defined(_GNU_SOURCE) #define _GNU_SOURCE #endif #ifdef PETSC_HAVE_STDLIB_H #include #endif int main() { double (*drand48_ptr)(void) = drand48; void (*srand48_ptr)(long int) = srand48; long int seed=10; srand48_ptr(seed); if (drand48_ptr() > 0.5) return 1; ; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language Cxx ================================================================================ TEST configureFPTrap from config.utilities.FPTrap(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/FPTrap.py:27) TESTING: configureFPTrap from config.utilities.FPTrap(config/BuildSystem/config/utilities/FPTrap.py:27) Checking the handling of floating point traps Checking for header: sigfpe.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "sigfpe.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "sigfpe.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "sigfpe.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c".: Checking for header: fpxcp.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "fpxcp.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "fpxcp.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "fpxcp.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c".: Checking for header: floatingpoint.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "floatingpoint.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "floatingpoint.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "floatingpoint.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c".: ================================================================================ TEST configureMkdir from config.programs(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/programs.py:22) TESTING: configureMkdir from config.programs(config/BuildSystem/config/programs.py:22) Make sure we can have mkdir automatically make intermediate directories Checking for program /opt/FJSVtclang/check/mkdir...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/mkdir...not found Checking for program /opt/kusu/bin/mkdir...not found Checking for program /opt/kusu/sbin/mkdir...not found Checking for program /usr/pgsql-9.0/bin/mkdir...not found Checking for program /usr/local/bin/mkdir...not found Checking for program /bin/mkdir...found Executing: /bin/mkdir -p .conftest/tmp Adding -p flag to /bin/mkdir -p to automatically create directories Defined make macro "MKDIR" to "/bin/mkdir -p" ================================================================================ TEST configureAutoreconf from config.programs(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/programs.py:44) TESTING: configureAutoreconf from config.programs(config/BuildSystem/config/programs.py:44) Check for autoreconf Checking for program /opt/FJSVtclang/check/autoreconf...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/autoreconf...not found Checking for program /opt/kusu/bin/autoreconf...not found Checking for program /opt/kusu/sbin/autoreconf...not found Checking for program /usr/pgsql-9.0/bin/autoreconf...not found Checking for program /usr/local/bin/autoreconf...not found Checking for program /bin/autoreconf...not found Checking for program /usr/bin/autoreconf...found All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.programs Executing: cd /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.programs/autoconfdir&&/usr/bin/autoreconf autoreconf test successful! ================================================================================ TEST configurePrograms from config.programs(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/programs.py:66) TESTING: configurePrograms from config.programs(config/BuildSystem/config/programs.py:66) Check for the programs needed to build and run PETSc Checking for program /opt/FJSVtclang/check/sh...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/sh...not found Checking for program /opt/kusu/bin/sh...not found Checking for program /opt/kusu/sbin/sh...not found Checking for program /usr/pgsql-9.0/bin/sh...not found Checking for program /usr/local/bin/sh...not found Checking for program /bin/sh...found Defined make macro "SHELL" to "/bin/sh" Checking for program /opt/FJSVtclang/check/sed...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/sed...not found Checking for program /opt/kusu/bin/sed...not found Checking for program /opt/kusu/sbin/sed...not found Checking for program /usr/pgsql-9.0/bin/sed...not found Checking for program /usr/local/bin/sed...not found Checking for program /bin/sed...found Defined make macro "SED" to "/bin/sed" Executing: /bin/sed -i s/sed/sd/g "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.programs/sed1" Adding SEDINPLACE cmd: /bin/sed -i Defined make macro "SEDINPLACE" to "/bin/sed -i" Checking for program /opt/FJSVtclang/check/mv...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/mv...not found Checking for program /opt/kusu/bin/mv...not found Checking for program /opt/kusu/sbin/mv...not found Checking for program /usr/pgsql-9.0/bin/mv...not found Checking for program /usr/local/bin/mv...not found Checking for program /bin/mv...found Defined make macro "MV" to "/bin/mv" Checking for program /opt/FJSVtclang/check/cp...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/cp...not found Checking for program /opt/kusu/bin/cp...not found Checking for program /opt/kusu/sbin/cp...not found Checking for program /usr/pgsql-9.0/bin/cp...not found Checking for program /usr/local/bin/cp...not found Checking for program /bin/cp...found Defined make macro "CP" to "/bin/cp" Checking for program /opt/FJSVtclang/check/grep...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/grep...not found Checking for program /opt/kusu/bin/grep...not found Checking for program /opt/kusu/sbin/grep...not found Checking for program /usr/pgsql-9.0/bin/grep...not found Checking for program /usr/local/bin/grep...not found Checking for program /bin/grep...found Defined make macro "GREP" to "/bin/grep" Checking for program /opt/FJSVtclang/check/rm...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/rm...not found Checking for program /opt/kusu/bin/rm...not found Checking for program /opt/kusu/sbin/rm...not found Checking for program /usr/pgsql-9.0/bin/rm...not found Checking for program /usr/local/bin/rm...not found Checking for program /bin/rm...found Defined make macro "RM" to "/bin/rm -f" Checking for program /opt/FJSVtclang/check/diff...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/diff...not found Checking for program /opt/kusu/bin/diff...not found Checking for program /opt/kusu/sbin/diff...not found Checking for program /usr/pgsql-9.0/bin/diff...not found Checking for program /usr/local/bin/diff...not found Checking for program /bin/diff...not found Checking for program /usr/bin/diff...found Executing: "/usr/bin/diff" -w "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.programs/diff1" "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.programs/diff2" Defined make macro "DIFF" to "/usr/bin/diff -w" Checking for program /usr/ucb/ps...not found Checking for program /usr/usb/ps...not found Checking for program /home/hp150306/t00196/ps...not found Checking for program /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/bin/win32fe/ps...not found Checking for program /opt/FJSVtclang/check/gzip...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/gzip...not found Checking for program /opt/kusu/bin/gzip...not found Checking for program /opt/kusu/sbin/gzip...not found Checking for program /usr/pgsql-9.0/bin/gzip...not found Checking for program /usr/local/bin/gzip...not found Checking for program /bin/gzip...found Defined make macro "GZIP" to "/bin/gzip" Defined "HAVE_GZIP" to "1" Defined make macro "PYTHON" to "/usr/bin/python" ================================================================================ TEST configureMake from config.packages.make(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/make.py:66) TESTING: configureMake from config.packages.make(config/BuildSystem/config/packages/make.py:66) Check for user specified make - or gmake, make Checking for program /opt/FJSVtclang/check/gmake...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/gmake...not found Checking for program /opt/kusu/bin/gmake...not found Checking for program /opt/kusu/sbin/gmake...not found Checking for program /usr/pgsql-9.0/bin/gmake...not found Checking for program /usr/local/bin/gmake...not found Checking for program /bin/gmake...not found Checking for program /usr/bin/gmake...found Defined make macro "MAKE" to "/usr/bin/gmake" ================================================================================ TEST configureCheckGNUMake from config.packages.make(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/make.py:84) TESTING: configureCheckGNUMake from config.packages.make(config/BuildSystem/config/packages/make.py:84) Check for GNU make Executing: /usr/bin/gmake --version stdout: GNU Make 3.81 Copyright (C) 2006 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. This program built for sparc64-unknown-linux-gnu Defined make macro "MAKE_IS_GNUMAKE" to "1" Defined make rule "libc" with dependencies "${LIBNAME}(${OBJSC})" and code [] Defined make rule "libcxx" with dependencies "${LIBNAME}(${OBJSCXX})" and code [] Defined make rule "libcu" with dependencies "${LIBNAME}(${OBJSCU})" and code [] Defined make rule "libf" with dependencies "${OBJSF}" and code -${AR} ${AR_FLAGS} ${LIBNAME} ${OBJSF} ================================================================================ TEST configureMakeNP from config.packages.make(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/make.py:119) TESTING: configureMakeNP from config.packages.make(config/BuildSystem/config/packages/make.py:119) check no of cores on the build machine [perhaps to do make '-j ncores'] module multiprocessing found 8 cores: using make_np = 7 Defined make macro "MAKE_NP" to "7" Defined make macro "OMAKE_PRINTDIR " to "/usr/bin/gmake --print-directory" Defined make macro "OMAKE" to "/usr/bin/gmake --no-print-directory" ================================================================================ TEST alternateConfigureLibrary from config.packages.OpenMPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.OpenMPI(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.MPICH(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.MPICH(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default Pushing language C ================================================================================ TEST configureLibrary from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:476) TESTING: configureLibrary from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:476) Calls the regular package configureLibrary and then does an additional test needed by MPI ================================================================================== Checking for a functional MPI Checking for library in Compiler specific search MPI: [] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [MPI_Init MPI_Comm_create] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Init(); static void _check_MPI_Init() { MPI_Init(); } char MPI_Comm_create(); static void _check_MPI_Comm_create() { MPI_Comm_create(); } int main() { _check_MPI_Init(); _check_MPI_Comm_create();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Checking for headers Compiler specific search MPI: [] Pushing language C ================================================================================ TEST checkInclude from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['mpi.h'] in [] Checking include with compiler flags var CPPFLAGS [] Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 212 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef long ptrdiff_t; #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef int wchar_t; #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 225 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 1 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi_portable_platform.h" #line 343 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi_portable_platform.h" #line 386 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi_portable_platform.h" #line 258 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 278 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" typedef ptrdiff_t MPI_Aint; typedef long long MPI_Offset; typedef struct ompi_communicator_t *MPI_Comm; typedef struct ompi_datatype_t *MPI_Datatype; typedef struct ompi_errhandler_t *MPI_Errhandler; typedef struct ompi_file_t *MPI_File; typedef struct ompi_group_t *MPI_Group; typedef struct ompi_info_t *MPI_Info; typedef struct ompi_op_t *MPI_Op; typedef struct ompi_request_t *MPI_Request; typedef struct ompi_message_t *MPI_Message; typedef struct ompi_status_public_t MPI_Status; typedef struct ompi_win_t *MPI_Win; #pragma pack(4) struct ompi_status_public_t { int MPI_SOURCE; int MPI_TAG; int MPI_ERROR; unsigned long _cancelled : 1; unsigned long _ucount : 63; }; #pragma pack() typedef struct ompi_status_public_t ompi_status_public_t; typedef int (MPI_Copy_function)(MPI_Comm, int, void *, void *, void *, int *); typedef int (MPI_Delete_function)(MPI_Comm, int, void *, void *); typedef int (MPI_Datarep_extent_function)(MPI_Datatype, MPI_Aint *, void *); typedef int (MPI_Datarep_conversion_function)(void *, MPI_Datatype, int, void *, MPI_Offset, void *); typedef void (MPI_Comm_errhandler_function)(MPI_Comm *, int *, ...); typedef MPI_Comm_errhandler_function MPI_Comm_errhandler_fn ; typedef void (ompi_file_errhandler_fn)(MPI_File *, int *, ...); typedef ompi_file_errhandler_fn MPI_File_errhandler_fn ; typedef ompi_file_errhandler_fn MPI_File_errhandler_function; typedef void (MPI_Win_errhandler_function)(MPI_Win *, int *, ...); typedef MPI_Win_errhandler_function MPI_Win_errhandler_fn ; typedef void (MPI_Handler_function)(MPI_Comm *, int *, ...); typedef void (MPI_User_function)(void *, void *, int *, MPI_Datatype *); typedef int (MPI_Comm_copy_attr_function)(MPI_Comm, int, void *, void *, void *, int *); typedef int (MPI_Comm_delete_attr_function)(MPI_Comm, int, void *, void *); typedef int (MPI_Type_copy_attr_function)(MPI_Datatype, int, void *, void *, void *, int *); typedef int (MPI_Type_delete_attr_function)(MPI_Datatype, int, void *, void *); typedef int (MPI_Win_copy_attr_function)(MPI_Win, int, void *, void *, void *, int *); typedef int (MPI_Win_delete_attr_function)(MPI_Win, int, void *, void *); typedef int (MPI_Grequest_query_function)(void *, MPI_Status *); typedef int (MPI_Grequest_free_function)(void *); typedef int (MPI_Grequest_cancel_function)(void *, int); #line 432 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 453 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 469 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" enum { MPI_TAG_UB, MPI_HOST, MPI_IO, MPI_WTIME_IS_GLOBAL, MPI_APPNUM, MPI_LASTUSEDCODE, MPI_UNIVERSE_SIZE, MPI_WIN_BASE, MPI_WIN_SIZE, MPI_WIN_DISP_UNIT, IMPI_CLIENT_SIZE, IMPI_CLIENT_COLOR, IMPI_HOST_SIZE, IMPI_HOST_COLOR }; #line 582 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" enum { MPI_IDENT, MPI_CONGRUENT, MPI_SIMILAR, MPI_UNEQUAL }; enum { MPI_THREAD_SINGLE, MPI_THREAD_FUNNELED, MPI_THREAD_SERIALIZED, MPI_THREAD_MULTIPLE }; enum { MPI_COMBINER_NAMED, MPI_COMBINER_DUP, MPI_COMBINER_CONTIGUOUS, MPI_COMBINER_VECTOR, MPI_COMBINER_HVECTOR_INTEGER, MPI_COMBINER_HVECTOR, MPI_COMBINER_INDEXED, MPI_COMBINER_HINDEXED_INTEGER, MPI_COMBINER_HINDEXED, MPI_COMBINER_INDEXED_BLOCK, MPI_COMBINER_STRUCT_INTEGER, MPI_COMBINER_STRUCT, MPI_COMBINER_SUBARRAY, MPI_COMBINER_DARRAY, MPI_COMBINER_F90_REAL, MPI_COMBINER_F90_COMPLEX, MPI_COMBINER_F90_INTEGER, MPI_COMBINER_RESIZED, MPI_COMBINER_HINDEXED_BLOCK }; #line 649 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" int OMPI_C_MPI_TYPE_NULL_DELETE_FN( MPI_Datatype datatype, int type_keyval, void* attribute_val_out, void* extra_state ); int OMPI_C_MPI_TYPE_NULL_COPY_FN( MPI_Datatype datatype, int type_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); int OMPI_C_MPI_TYPE_DUP_FN( MPI_Datatype datatype, int type_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); int OMPI_C_MPI_COMM_NULL_DELETE_FN( MPI_Comm comm, int comm_keyval, void* attribute_val_out, void* extra_state ); int OMPI_C_MPI_COMM_NULL_COPY_FN( MPI_Comm comm, int comm_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); int OMPI_C_MPI_COMM_DUP_FN( MPI_Comm comm, int comm_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); int OMPI_C_MPI_NULL_DELETE_FN( MPI_Comm comm, int comm_keyval, void* attribute_val_out, void* extra_state ) ; int OMPI_C_MPI_NULL_COPY_FN( MPI_Comm comm, int comm_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ) ; int OMPI_C_MPI_DUP_FN( MPI_Comm comm, int comm_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ) ; int OMPI_C_MPI_WIN_NULL_DELETE_FN( MPI_Win window, int win_keyval, void* attribute_val_out, void* extra_state ); int OMPI_C_MPI_WIN_NULL_COPY_FN( MPI_Win window, int win_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); int OMPI_C_MPI_WIN_DUP_FN( MPI_Win window, int win_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); extern struct ompi_predefined_communicator_t ompi_mpi_comm_world; extern struct ompi_predefined_communicator_t ompi_mpi_comm_self; extern struct ompi_predefined_communicator_t ompi_mpi_comm_null; extern struct ompi_predefined_group_t ompi_mpi_group_empty; extern struct ompi_predefined_group_t ompi_mpi_group_null; extern struct ompi_predefined_request_t ompi_request_null; extern struct ompi_predefined_message_t ompi_message_null; extern struct ompi_predefined_message_t ompi_message_no_proc; extern struct ompi_predefined_op_t ompi_mpi_op_null; extern struct ompi_predefined_op_t ompi_mpi_op_min; extern struct ompi_predefined_op_t ompi_mpi_op_max; extern struct ompi_predefined_op_t ompi_mpi_op_sum; extern struct ompi_predefined_op_t ompi_mpi_op_prod; extern struct ompi_predefined_op_t ompi_mpi_op_land; extern struct ompi_predefined_op_t ompi_mpi_op_band; extern struct ompi_predefined_op_t ompi_mpi_op_lor; extern struct ompi_predefined_op_t ompi_mpi_op_bor; extern struct ompi_predefined_op_t ompi_mpi_op_lxor; extern struct ompi_predefined_op_t ompi_mpi_op_bxor; extern struct ompi_predefined_op_t ompi_mpi_op_maxloc; extern struct ompi_predefined_op_t ompi_mpi_op_minloc; extern struct ompi_predefined_op_t ompi_mpi_op_replace; extern struct ompi_predefined_datatype_t ompi_mpi_datatype_null; extern struct ompi_predefined_datatype_t ompi_mpi_lb ; extern struct ompi_predefined_datatype_t ompi_mpi_ub ; extern struct ompi_predefined_datatype_t ompi_mpi_char; extern struct ompi_predefined_datatype_t ompi_mpi_signed_char; extern struct ompi_predefined_datatype_t ompi_mpi_unsigned_char; extern struct ompi_predefined_datatype_t ompi_mpi_byte; extern struct ompi_predefined_datatype_t ompi_mpi_short; extern struct ompi_predefined_datatype_t ompi_mpi_unsigned_short; extern struct ompi_predefined_datatype_t ompi_mpi_int; extern struct ompi_predefined_datatype_t ompi_mpi_unsigned; extern struct ompi_predefined_datatype_t ompi_mpi_long; extern struct ompi_predefined_datatype_t ompi_mpi_unsigned_long; extern struct ompi_predefined_datatype_t ompi_mpi_long_long_int; extern struct ompi_predefined_datatype_t ompi_mpi_unsigned_long_long; extern struct ompi_predefined_datatype_t ompi_mpi_float; extern struct ompi_predefined_datatype_t ompi_mpi_double; extern struct ompi_predefined_datatype_t ompi_mpi_long_double; extern struct ompi_predefined_datatype_t ompi_mpi_wchar; extern struct ompi_predefined_datatype_t ompi_mpi_packed; extern struct ompi_predefined_datatype_t ompi_mpi_cxx_bool; extern struct ompi_predefined_datatype_t ompi_mpi_cxx_cplex; extern struct ompi_predefined_datatype_t ompi_mpi_cxx_dblcplex; extern struct ompi_predefined_datatype_t ompi_mpi_cxx_ldblcplex; extern struct ompi_predefined_datatype_t ompi_mpi_logic; extern struct ompi_predefined_datatype_t ompi_mpi_character; extern struct ompi_predefined_datatype_t ompi_mpi_integer; extern struct ompi_predefined_datatype_t ompi_mpi_real; extern struct ompi_predefined_datatype_t ompi_mpi_dblprec; extern struct ompi_predefined_datatype_t ompi_mpi_cplex; extern struct ompi_predefined_datatype_t ompi_mpi_dblcplex; extern struct ompi_predefined_datatype_t ompi_mpi_ldblcplex; extern struct ompi_predefined_datatype_t ompi_mpi_2int; extern struct ompi_predefined_datatype_t ompi_mpi_2integer; extern struct ompi_predefined_datatype_t ompi_mpi_2real; extern struct ompi_predefined_datatype_t ompi_mpi_2dblprec; extern struct ompi_predefined_datatype_t ompi_mpi_2cplex; extern struct ompi_predefined_datatype_t ompi_mpi_2dblcplex; extern struct ompi_predefined_datatype_t ompi_mpi_float_int; extern struct ompi_predefined_datatype_t ompi_mpi_double_int; extern struct ompi_predefined_datatype_t ompi_mpi_longdbl_int; extern struct ompi_predefined_datatype_t ompi_mpi_short_int; extern struct ompi_predefined_datatype_t ompi_mpi_long_int; extern struct ompi_predefined_datatype_t ompi_mpi_logical1; extern struct ompi_predefined_datatype_t ompi_mpi_logical2; extern struct ompi_predefined_datatype_t ompi_mpi_logical4; extern struct ompi_predefined_datatype_t ompi_mpi_logical8; extern struct ompi_predefined_datatype_t ompi_mpi_integer1; extern struct ompi_predefined_datatype_t ompi_mpi_integer2; extern struct ompi_predefined_datatype_t ompi_mpi_integer4; extern struct ompi_predefined_datatype_t ompi_mpi_integer8; extern struct ompi_predefined_datatype_t ompi_mpi_integer16; extern struct ompi_predefined_datatype_t ompi_mpi_real2; extern struct ompi_predefined_datatype_t ompi_mpi_real4; extern struct ompi_predefined_datatype_t ompi_mpi_real8; extern struct ompi_predefined_datatype_t ompi_mpi_real16; extern struct ompi_predefined_datatype_t ompi_mpi_complex8; extern struct ompi_predefined_datatype_t ompi_mpi_complex16; extern struct ompi_predefined_datatype_t ompi_mpi_complex32; extern struct ompi_predefined_datatype_t ompi_mpi_int8_t; extern struct ompi_predefined_datatype_t ompi_mpi_uint8_t; extern struct ompi_predefined_datatype_t ompi_mpi_int16_t; extern struct ompi_predefined_datatype_t ompi_mpi_uint16_t; extern struct ompi_predefined_datatype_t ompi_mpi_int32_t; extern struct ompi_predefined_datatype_t ompi_mpi_uint32_t; extern struct ompi_predefined_datatype_t ompi_mpi_int64_t; extern struct ompi_predefined_datatype_t ompi_mpi_uint64_t; extern struct ompi_predefined_datatype_t ompi_mpi_aint; extern struct ompi_predefined_datatype_t ompi_mpi_offset; extern struct ompi_predefined_datatype_t ompi_mpi_c_bool; extern struct ompi_predefined_datatype_t ompi_mpi_c_complex; extern struct ompi_predefined_datatype_t ompi_mpi_c_float_complex; extern struct ompi_predefined_datatype_t ompi_mpi_c_double_complex; extern struct ompi_predefined_datatype_t ompi_mpi_c_long_double_complex; extern struct ompi_predefined_errhandler_t ompi_mpi_errhandler_null; extern struct ompi_predefined_errhandler_t ompi_mpi_errors_are_fatal; extern struct ompi_predefined_errhandler_t ompi_mpi_errors_return; extern struct ompi_predefined_win_t ompi_mpi_win_null; extern struct ompi_predefined_file_t ompi_mpi_file_null; extern struct ompi_predefined_info_t ompi_mpi_info_null; extern int *MPI_F_STATUS_IGNORE; extern int *MPI_F_STATUSES_IGNORE; #line 921 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 954 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 1011 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 1038 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" int MPI_Abort(MPI_Comm comm, int errorcode); int MPI_Accumulate(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Op op, MPI_Win win); int MPI_Add_error_class(int *errorclass); int MPI_Add_error_code(int errorclass, int *errorcode); int MPI_Add_error_string(int errorcode, char *string); int MPI_Address(void *location, MPI_Aint *address) ; int MPI_Allgather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm); int MPI_Iallgather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int MPI_Allgatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, MPI_Comm comm); int MPI_Iallgatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int MPI_Alloc_mem(MPI_Aint size, MPI_Info info, void *baseptr); int MPI_Allreduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int MPI_Iallreduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int MPI_Alltoall(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm); int MPI_Ialltoall(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int MPI_Alltoallv(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype recvtype, MPI_Comm comm); int MPI_Ialltoallv(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int MPI_Alltoallw(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype *sendtypes, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype *recvtypes, MPI_Comm comm); int MPI_Ialltoallw(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype *sendtypes, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype *recvtypes, MPI_Comm comm, MPI_Request *request); int MPI_Attr_delete(MPI_Comm comm, int keyval) ; int MPI_Attr_get(MPI_Comm comm, int keyval, void *attribute_val, int *flag) ; int MPI_Attr_put(MPI_Comm comm, int keyval, void *attribute_val) ; int MPI_Barrier(MPI_Comm comm); int MPI_Ibarrier(MPI_Comm comm, MPI_Request *request); int MPI_Bcast(void *buffer, int count, MPI_Datatype datatype, int root, MPI_Comm comm); int MPI_Bsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int MPI_Ibcast(void *buffer, int count, MPI_Datatype datatype, int root, MPI_Comm comm, MPI_Request *request); int MPI_Bsend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Buffer_attach(void *buffer, int size); int MPI_Buffer_detach(void *buffer, int *size); int MPI_Cancel(MPI_Request *request); int MPI_Cart_coords(MPI_Comm comm, int rank, int maxdims, int *coords); int MPI_Cart_create(MPI_Comm old_comm, int ndims, int *dims, int *periods, int reorder, MPI_Comm *comm_cart); int MPI_Cart_get(MPI_Comm comm, int maxdims, int *dims, int *periods, int *coords); int MPI_Cart_map(MPI_Comm comm, int ndims, int *dims, int *periods, int *newrank); int MPI_Cart_rank(MPI_Comm comm, int *coords, int *rank); int MPI_Cart_shift(MPI_Comm comm, int direction, int disp, int *rank_source, int *rank_dest); int MPI_Cart_sub(MPI_Comm comm, int *remain_dims, MPI_Comm *new_comm); int MPI_Cartdim_get(MPI_Comm comm, int *ndims); int MPI_Close_port(char *port_name); int MPI_Comm_accept(char *port_name, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *newcomm); int MPI_Comm_c2f(MPI_Comm comm); int MPI_Comm_call_errhandler(MPI_Comm comm, int errorcode); int MPI_Comm_compare(MPI_Comm comm1, MPI_Comm comm2, int *result); int MPI_Comm_connect(char *port_name, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *newcomm); int MPI_Comm_create_errhandler(MPI_Comm_errhandler_function *function, MPI_Errhandler *errhandler); int MPI_Comm_create_keyval(MPI_Comm_copy_attr_function *comm_copy_attr_fn, MPI_Comm_delete_attr_function *comm_delete_attr_fn, int *comm_keyval, void *extra_state); int MPI_Comm_create(MPI_Comm comm, MPI_Group group, MPI_Comm *newcomm); int MPI_Comm_delete_attr(MPI_Comm comm, int comm_keyval); int MPI_Comm_disconnect(MPI_Comm *comm); int MPI_Comm_dup(MPI_Comm comm, MPI_Comm *newcomm); MPI_Comm MPI_Comm_f2c(int comm); int MPI_Comm_free_keyval(int *comm_keyval); int MPI_Comm_free(MPI_Comm *comm); int MPI_Comm_get_attr(MPI_Comm comm, int comm_keyval, void *attribute_val, int *flag); int MPI_Dist_graph_create(MPI_Comm comm_old, int n, int nodes[], int degrees[], int targets[], int weights[], MPI_Info info, int reorder, MPI_Comm * newcomm); int MPI_Dist_graph_create_adjacent(MPI_Comm comm_old, int indegree, int sources[], int sourceweights[], int outdegree, int destinations[], int destweights[], MPI_Info info, int reorder, MPI_Comm *comm_dist_graph); int MPI_Dist_graph_neighbors(MPI_Comm comm, int maxindegree, int sources[], int sourceweights[], int maxoutdegree, int destinations[], int destweights[]); int MPI_Dist_graph_neighbors_count(MPI_Comm comm, int *inneighbors, int *outneighbors, int *weighted); int MPI_Comm_get_errhandler(MPI_Comm comm, MPI_Errhandler *erhandler); int MPI_Comm_get_name(MPI_Comm comm, char *comm_name, int *resultlen); int MPI_Comm_get_parent(MPI_Comm *parent); int MPI_Comm_group(MPI_Comm comm, MPI_Group *group); int MPI_Comm_join(int fd, MPI_Comm *intercomm); int MPI_Comm_rank(MPI_Comm comm, int *rank); int MPI_Comm_remote_group(MPI_Comm comm, MPI_Group *group); int MPI_Comm_remote_size(MPI_Comm comm, int *size); int MPI_Comm_set_attr(MPI_Comm comm, int comm_keyval, void *attribute_val); int MPI_Comm_set_errhandler(MPI_Comm comm, MPI_Errhandler errhandler); int MPI_Comm_set_name(MPI_Comm comm, char *comm_name); int MPI_Comm_size(MPI_Comm comm, int *size); int MPI_Comm_spawn(char *command, char **argv, int maxprocs, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *intercomm, int *array_of_errcodes); int MPI_Comm_spawn_multiple(int count, char **array_of_commands, char ***array_of_argv, int *array_of_maxprocs, MPI_Info *array_of_info, int root, MPI_Comm comm, MPI_Comm *intercomm, int *array_of_errcodes); int MPI_Comm_split(MPI_Comm comm, int color, int key, MPI_Comm *newcomm); int MPI_Comm_test_inter(MPI_Comm comm, int *flag); int MPI_Dims_create(int nnodes, int ndims, int *dims); int MPI_Errhandler_c2f(MPI_Errhandler errhandler); int MPI_Errhandler_create(MPI_Handler_function *function, MPI_Errhandler *errhandler) ; MPI_Errhandler MPI_Errhandler_f2c(int errhandler); int MPI_Errhandler_free(MPI_Errhandler *errhandler); int MPI_Errhandler_get(MPI_Comm comm, MPI_Errhandler *errhandler) ; int MPI_Errhandler_set(MPI_Comm comm, MPI_Errhandler errhandler) ; int MPI_Error_class(int errorcode, int *errorclass); int MPI_Error_string(int errorcode, char *string, int *resultlen); int MPI_Exscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int MPI_Iexscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int MPI_File_c2f(MPI_File file); MPI_File MPI_File_f2c(int file); int MPI_File_call_errhandler(MPI_File fh, int errorcode); int MPI_File_create_errhandler(MPI_File_errhandler_function *function, MPI_Errhandler *errhandler); int MPI_File_set_errhandler( MPI_File file, MPI_Errhandler errhandler); int MPI_File_get_errhandler( MPI_File file, MPI_Errhandler *errhandler); int MPI_File_open(MPI_Comm comm, char *filename, int amode, MPI_Info info, MPI_File *fh); int MPI_File_close(MPI_File *fh); int MPI_File_delete(char *filename, MPI_Info info); int MPI_File_set_size(MPI_File fh, MPI_Offset size); int MPI_File_preallocate(MPI_File fh, MPI_Offset size); int MPI_File_get_size(MPI_File fh, MPI_Offset *size); int MPI_File_get_group(MPI_File fh, MPI_Group *group); int MPI_File_get_amode(MPI_File fh, int *amode); int MPI_File_set_info(MPI_File fh, MPI_Info info); int MPI_File_get_info(MPI_File fh, MPI_Info *info_used); int MPI_File_set_view(MPI_File fh, MPI_Offset disp, MPI_Datatype etype, MPI_Datatype filetype, char *datarep, MPI_Info info); int MPI_File_get_view(MPI_File fh, MPI_Offset *disp, MPI_Datatype *etype, MPI_Datatype *filetype, char *datarep); int MPI_File_read_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_read_at_all(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write_at_all(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_iread_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_iwrite_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_read(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_read_all(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write_all(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_iread(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_iwrite(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_seek(MPI_File fh, MPI_Offset offset, int whence); int MPI_File_get_position(MPI_File fh, MPI_Offset *offset); int MPI_File_get_byte_offset(MPI_File fh, MPI_Offset offset, MPI_Offset *disp); int MPI_File_read_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_iread_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_iwrite_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_read_ordered(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write_ordered(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_seek_shared(MPI_File fh, MPI_Offset offset, int whence); int MPI_File_get_position_shared(MPI_File fh, MPI_Offset *offset); int MPI_File_read_at_all_begin(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype); int MPI_File_read_at_all_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_write_at_all_begin(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype); int MPI_File_write_at_all_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_read_all_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int MPI_File_read_all_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_write_all_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int MPI_File_write_all_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_read_ordered_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int MPI_File_read_ordered_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_write_ordered_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int MPI_File_write_ordered_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_get_type_extent(MPI_File fh, MPI_Datatype datatype, MPI_Aint *extent); int MPI_File_set_atomicity(MPI_File fh, int flag); int MPI_File_get_atomicity(MPI_File fh, int *flag); int MPI_File_sync(MPI_File fh); int MPI_Finalize(void); int MPI_Finalized(int *flag); int MPI_Free_mem(void *base); int MPI_Gather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int MPI_Igather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int MPI_Gatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, int root, MPI_Comm comm); int MPI_Igatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int MPI_Get_address(void *location, MPI_Aint *address); int MPI_Get_count(MPI_Status *status, MPI_Datatype datatype, int *count); int MPI_Get_elements(MPI_Status *status, MPI_Datatype datatype, int *count); int MPI_Get(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Win win); int MPI_Get_processor_name(char *name, int *resultlen); int MPI_Get_version(int *version, int *subversion); int MPI_Graph_create(MPI_Comm comm_old, int nnodes, int *index, int *edges, int reorder, MPI_Comm *comm_graph); int MPI_Graph_get(MPI_Comm comm, int maxindex, int maxedges, int *index, int *edges); int MPI_Graph_map(MPI_Comm comm, int nnodes, int *index, int *edges, int *newrank); int MPI_Graph_neighbors_count(MPI_Comm comm, int rank, int *nneighbors); int MPI_Graph_neighbors(MPI_Comm comm, int rank, int maxneighbors, int *neighbors); int MPI_Graphdims_get(MPI_Comm comm, int *nnodes, int *nedges); int MPI_Grequest_complete(MPI_Request request); int MPI_Grequest_start(MPI_Grequest_query_function *query_fn, MPI_Grequest_free_function *free_fn, MPI_Grequest_cancel_function *cancel_fn, void *extra_state, MPI_Request *request); int MPI_Group_c2f(MPI_Group group); int MPI_Group_compare(MPI_Group group1, MPI_Group group2, int *result); int MPI_Group_difference(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int MPI_Group_excl(MPI_Group group, int n, int *ranks, MPI_Group *newgroup); MPI_Group MPI_Group_f2c(int group); int MPI_Group_free(MPI_Group *group); int MPI_Group_incl(MPI_Group group, int n, int *ranks, MPI_Group *newgroup); int MPI_Group_intersection(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int MPI_Group_range_excl(MPI_Group group, int n, int ranges[][3], MPI_Group *newgroup); int MPI_Group_range_incl(MPI_Group group, int n, int ranges[][3], MPI_Group *newgroup); int MPI_Group_rank(MPI_Group group, int *rank); int MPI_Group_size(MPI_Group group, int *size); int MPI_Group_translate_ranks(MPI_Group group1, int n, int *ranks1, MPI_Group group2, int *ranks2); int MPI_Group_union(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int MPI_Ibsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Improbe(int source, int tag, MPI_Comm comm, int *flag, MPI_Message *message, MPI_Status *status); int MPI_Imrecv(void *buf, int count, MPI_Datatype type, MPI_Message *message, MPI_Request *request); int MPI_Info_c2f(MPI_Info info); int MPI_Info_create(MPI_Info *info); int MPI_Info_delete(MPI_Info info, char *key); int MPI_Info_dup(MPI_Info info, MPI_Info *newinfo); MPI_Info MPI_Info_f2c(int info); int MPI_Info_free(MPI_Info *info); int MPI_Info_get(MPI_Info info, char *key, int valuelen, char *value, int *flag); int MPI_Info_get_nkeys(MPI_Info info, int *nkeys); int MPI_Info_get_nthkey(MPI_Info info, int n, char *key); int MPI_Info_get_valuelen(MPI_Info info, char *key, int *valuelen, int *flag); int MPI_Info_set(MPI_Info info, char *key, char *value); int MPI_Init(int *argc, char ***argv); int MPI_Initialized(int *flag); int MPI_Init_thread(int *argc, char ***argv, int required, int *provided); int MPI_Intercomm_create(MPI_Comm local_comm, int local_leader, MPI_Comm bridge_comm, int remote_leader, int tag, MPI_Comm *newintercomm); int MPI_Intercomm_merge(MPI_Comm intercomm, int high, MPI_Comm *newintercomm); int MPI_Iprobe(int source, int tag, MPI_Comm comm, int *flag, MPI_Status *status); int MPI_Irecv(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Irsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Isend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Issend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Is_thread_main(int *flag); int MPI_Keyval_create(MPI_Copy_function *copy_fn, MPI_Delete_function *delete_fn, int *keyval, void *extra_state) ; int MPI_Keyval_free(int *keyval) ; int MPI_Lookup_name(char *service_name, MPI_Info info, char *port_name); int MPI_Message_c2f(MPI_Message message); MPI_Message MPI_Message_f2c(int message); int MPI_Mprobe(int source, int tag, MPI_Comm comm, MPI_Message *message, MPI_Status *status); int MPI_Mrecv(void *buf, int count, MPI_Datatype type, MPI_Message *message, MPI_Status *status); int MPI_Op_c2f(MPI_Op op); int MPI_Op_commutative(MPI_Op op, int *commute); int MPI_Op_create(MPI_User_function *function, int commute, MPI_Op *op); int MPI_Open_port(MPI_Info info, char *port_name); MPI_Op MPI_Op_f2c(int op); int MPI_Op_free(MPI_Op *op); int MPI_Pack_external(char *datarep, void *inbuf, int incount, MPI_Datatype datatype, void *outbuf, MPI_Aint outsize, MPI_Aint *position); int MPI_Pack_external_size(char *datarep, int incount, MPI_Datatype datatype, MPI_Aint *size); int MPI_Pack(void *inbuf, int incount, MPI_Datatype datatype, void *outbuf, int outsize, int *position, MPI_Comm comm); int MPI_Pack_size(int incount, MPI_Datatype datatype, MPI_Comm comm, int *size); int MPI_Pcontrol(const int level, ...); int MPI_Probe(int source, int tag, MPI_Comm comm, MPI_Status *status); int MPI_Publish_name(char *service_name, MPI_Info info, char *port_name); int MPI_Put(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Win win); int MPI_Query_thread(int *provided); int MPI_Recv_init(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Recv(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Status *status); int MPI_Reduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, int root, MPI_Comm comm); int MPI_Ireduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, int root, MPI_Comm comm, MPI_Request *request); int MPI_Reduce_local(void *inbuf, void *inoutbuf, int count, MPI_Datatype datatype, MPI_Op op); int MPI_Reduce_scatter(void *sendbuf, void *recvbuf, int *recvcounts, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int MPI_Ireduce_scatter(void *sendbuf, void *recvbuf, int *recvcounts, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int MPI_Reduce_scatter_block(void *sendbuf, void *recvbuf, int recvcount, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int MPI_Ireduce_scatter_block(void *sendbuf, void *recvbuf, int recvcount, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int MPI_Register_datarep(char *datarep, MPI_Datarep_conversion_function *read_conversion_fn, MPI_Datarep_conversion_function *write_conversion_fn, MPI_Datarep_extent_function *dtype_file_extent_fn, void *extra_state); int MPI_Request_c2f(MPI_Request request); MPI_Request MPI_Request_f2c(int request); int MPI_Request_free(MPI_Request *request); int MPI_Request_get_status(MPI_Request request, int *flag, MPI_Status *status); int MPI_Rsend(void *ibuf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int MPI_Rsend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Scan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int MPI_Iscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int MPI_Scatter(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int MPI_Iscatter(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int MPI_Scatterv(void *sendbuf, int *sendcounts, int *displs, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int MPI_Iscatterv(void *sendbuf, int *sendcounts, int *displs, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int MPI_Send_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Send(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int MPI_Sendrecv(void *sendbuf, int sendcount, MPI_Datatype sendtype, int dest, int sendtag, void *recvbuf, int recvcount, MPI_Datatype recvtype, int source, int recvtag, MPI_Comm comm, MPI_Status *status); int MPI_Sendrecv_replace(void * buf, int count, MPI_Datatype datatype, int dest, int sendtag, int source, int recvtag, MPI_Comm comm, MPI_Status *status); int MPI_Ssend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Ssend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int MPI_Start(MPI_Request *request); int MPI_Startall(int count, MPI_Request *array_of_requests); int MPI_Status_c2f(MPI_Status *c_status, int *f_status); int MPI_Status_f2c(int *f_status, MPI_Status *c_status); int MPI_Status_set_cancelled(MPI_Status *status, int flag); int MPI_Status_set_elements(MPI_Status *status, MPI_Datatype datatype, int count); int MPI_Testall(int count, MPI_Request array_of_requests[], int *flag, MPI_Status array_of_statuses[]); int MPI_Testany(int count, MPI_Request array_of_requests[], int *index, int *flag, MPI_Status *status); int MPI_Test(MPI_Request *request, int *flag, MPI_Status *status); int MPI_Test_cancelled(MPI_Status *status, int *flag); int MPI_Testsome(int incount, MPI_Request array_of_requests[], int *outcount, int array_of_indices[], MPI_Status array_of_statuses[]); int MPI_Topo_test(MPI_Comm comm, int *status); int MPI_Type_c2f(MPI_Datatype datatype); int MPI_Type_commit(MPI_Datatype *type); int MPI_Type_contiguous(int count, MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_darray(int size, int rank, int ndims, int gsize_array[], int distrib_array[], int darg_array[], int psize_array[], int order, MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_f90_complex(int p, int r, MPI_Datatype *newtype); int MPI_Type_create_f90_integer(int r, MPI_Datatype *newtype); int MPI_Type_create_f90_real(int p, int r, MPI_Datatype *newtype); int MPI_Type_create_hindexed(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_hvector(int count, int blocklength, MPI_Aint stride, MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_keyval(MPI_Type_copy_attr_function *type_copy_attr_fn, MPI_Type_delete_attr_function *type_delete_attr_fn, int *type_keyval, void *extra_state); int MPI_Type_create_indexed_block(int count, int blocklength, int array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_struct(int count, int array_of_block_lengths[], MPI_Aint array_of_displacements[], MPI_Datatype array_of_types[], MPI_Datatype *newtype); int MPI_Type_create_subarray(int ndims, int size_array[], int subsize_array[], int start_array[], int order, MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_resized(MPI_Datatype oldtype, MPI_Aint lb, MPI_Aint extent, MPI_Datatype *newtype); int MPI_Type_delete_attr(MPI_Datatype type, int type_keyval); int MPI_Type_dup(MPI_Datatype type, MPI_Datatype *newtype); int MPI_Type_extent(MPI_Datatype type, MPI_Aint *extent) ; int MPI_Type_free(MPI_Datatype *type); int MPI_Type_free_keyval(int *type_keyval); MPI_Datatype MPI_Type_f2c(int datatype); int MPI_Type_get_attr(MPI_Datatype type, int type_keyval, void *attribute_val, int *flag); int MPI_Type_get_contents(MPI_Datatype mtype, int max_integers, int max_addresses, int max_datatypes, int array_of_integers[], MPI_Aint array_of_addresses[], MPI_Datatype array_of_datatypes[]); int MPI_Type_get_envelope(MPI_Datatype type, int *num_integers, int *num_addresses, int *num_datatypes, int *combiner); int MPI_Type_get_extent(MPI_Datatype type, MPI_Aint *lb, MPI_Aint *extent); int MPI_Type_get_name(MPI_Datatype type, char *type_name, int *resultlen); int MPI_Type_get_true_extent(MPI_Datatype datatype, MPI_Aint *true_lb, MPI_Aint *true_extent); int MPI_Type_hindexed(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype) ; int MPI_Type_hvector(int count, int blocklength, MPI_Aint stride, MPI_Datatype oldtype, MPI_Datatype *newtype) ; int MPI_Type_indexed(int count, int array_of_blocklengths[], int array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_lb(MPI_Datatype type, MPI_Aint *lb) ; int MPI_Type_match_size(int typeclass, int size, MPI_Datatype *type); int MPI_Type_set_attr(MPI_Datatype type, int type_keyval, void *attr_val); int MPI_Type_set_name(MPI_Datatype type, char *type_name); int MPI_Type_size(MPI_Datatype type, int *size); int MPI_Type_struct(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype array_of_types[], MPI_Datatype *newtype) ; int MPI_Type_ub(MPI_Datatype mtype, MPI_Aint *ub) ; int MPI_Type_vector(int count, int blocklength, int stride, MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Unpack(void *inbuf, int insize, int *position, void *outbuf, int outcount, MPI_Datatype datatype, MPI_Comm comm); int MPI_Unpublish_name(char *service_name, MPI_Info info, char *port_name); int MPI_Unpack_external (char *datarep, void *inbuf, MPI_Aint insize, MPI_Aint *position, void *outbuf, int outcount, MPI_Datatype datatype); int MPI_Waitall(int count, MPI_Request *array_of_requests, MPI_Status *array_of_statuses); int MPI_Waitany(int count, MPI_Request *array_of_requests, int *index, MPI_Status *status); int MPI_Wait(MPI_Request *request, MPI_Status *status); int MPI_Waitsome(int incount, MPI_Request *array_of_requests, int *outcount, int *array_of_indices, MPI_Status *array_of_statuses); int MPI_Win_c2f(MPI_Win win); int MPI_Win_call_errhandler(MPI_Win win, int errorcode); int MPI_Win_complete(MPI_Win win); int MPI_Win_create(void *base, MPI_Aint size, int disp_unit, MPI_Info info, MPI_Comm comm, MPI_Win *win); int MPI_Win_create_errhandler(MPI_Win_errhandler_function *function, MPI_Errhandler *errhandler); int MPI_Win_create_keyval(MPI_Win_copy_attr_function *win_copy_attr_fn, MPI_Win_delete_attr_function *win_delete_attr_fn, int *win_keyval, void *extra_state); int MPI_Win_delete_attr(MPI_Win win, int win_keyval); MPI_Win MPI_Win_f2c(int win); int MPI_Win_fence(int assert, MPI_Win win); int MPI_Win_free(MPI_Win *win); int MPI_Win_free_keyval(int *win_keyval); int MPI_Win_get_attr(MPI_Win win, int win_keyval, void *attribute_val, int *flag); int MPI_Win_get_errhandler(MPI_Win win, MPI_Errhandler *errhandler); int MPI_Win_get_group(MPI_Win win, MPI_Group *group); int MPI_Win_get_name(MPI_Win win, char *win_name, int *resultlen); int MPI_Win_lock(int lock_type, int rank, int assert, MPI_Win win); int MPI_Win_post(MPI_Group group, int assert, MPI_Win win); int MPI_Win_set_attr(MPI_Win win, int win_keyval, void *attribute_val); int MPI_Win_set_errhandler(MPI_Win win, MPI_Errhandler errhandler); int MPI_Win_set_name(MPI_Win win, char *win_name); int MPI_Win_start(MPI_Group group, int assert, MPI_Win win); int MPI_Win_test(MPI_Win win, int *flag); int MPI_Win_unlock(int rank, MPI_Win win); int MPI_Win_wait(MPI_Win win); double MPI_Wtick(void); double MPI_Wtime(void); int PMPI_Abort(MPI_Comm comm, int errorcode); int PMPI_Accumulate(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Op op, MPI_Win win); int PMPI_Add_error_class(int *errorclass); int PMPI_Add_error_code(int errorclass, int *errorcode); int PMPI_Add_error_string(int errorcode, char *string); int PMPI_Address(void *location, MPI_Aint *address) ; int PMPI_Allgather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm); int PMPI_Iallgather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int PMPI_Allgatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, MPI_Comm comm); int PMPI_Iallgatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int PMPI_Alloc_mem(MPI_Aint size, MPI_Info info, void *baseptr); int PMPI_Allreduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int PMPI_Iallreduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int PMPI_Alltoall(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm); int PMPI_Ialltoall(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int PMPI_Alltoallv(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype recvtype, MPI_Comm comm); int PMPI_Ialltoallv(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int PMPI_Alltoallw(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype *sendtypes, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype *recvtypes, MPI_Comm comm); int PMPI_Ialltoallw(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype *sendtypes, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype *recvtypes, MPI_Comm comm, MPI_Request *request); int PMPI_Attr_delete(MPI_Comm comm, int keyval) ; int PMPI_Attr_get(MPI_Comm comm, int keyval, void *attribute_val, int *flag) ; int PMPI_Dist_graph_create(MPI_Comm comm_old, int n, int nodes[], int degrees[], int targets[], int weights[], MPI_Info info, int reorder, MPI_Comm * newcomm); int PMPI_Dist_graph_create_adjacent(MPI_Comm comm_old, int indegree, int sources[], int sourceweights[], int outdegree, int destinations[], int destweights[], MPI_Info info, int reorder, MPI_Comm *comm_dist_graph); int PMPI_Dist_graph_neighbors(MPI_Comm comm, int maxindegree, int sources[], int sourceweights[], int maxoutdegree, int destinations[], int destweights[]); int PMPI_Dist_graph_neighbors_count(MPI_Comm comm, int *inneighbors, int *outneighbors, int *weighted); int PMPI_Attr_put(MPI_Comm comm, int keyval, void *attribute_val) ; int PMPI_Barrier(MPI_Comm comm); int PMPI_Ibarrier(MPI_Comm comm, MPI_Request *request); int PMPI_Bcast(void *buffer, int count, MPI_Datatype datatype, int root, MPI_Comm comm); int PMPI_Ibcast(void *buffer, int count, MPI_Datatype datatype, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Bsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int PMPI_Bsend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Buffer_attach(void *buffer, int size); int PMPI_Buffer_detach(void *buffer, int *size); int PMPI_Cancel(MPI_Request *request); int PMPI_Cart_coords(MPI_Comm comm, int rank, int maxdims, int *coords); int PMPI_Cart_create(MPI_Comm old_comm, int ndims, int *dims, int *periods, int reorder, MPI_Comm *comm_cart); int PMPI_Cart_get(MPI_Comm comm, int maxdims, int *dims, int *periods, int *coords); int PMPI_Cart_map(MPI_Comm comm, int ndims, int *dims, int *periods, int *newrank); int PMPI_Cart_rank(MPI_Comm comm, int *coords, int *rank); int PMPI_Cart_shift(MPI_Comm comm, int direction, int disp, int *rank_source, int *rank_dest); int PMPI_Cart_sub(MPI_Comm comm, int *remain_dims, MPI_Comm *new_comm); int PMPI_Cartdim_get(MPI_Comm comm, int *ndims); int PMPI_Close_port(char *port_name); int PMPI_Comm_accept(char *port_name, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *newcomm); int PMPI_Comm_c2f(MPI_Comm comm); int PMPI_Comm_call_errhandler(MPI_Comm comm, int errorcode); int PMPI_Comm_compare(MPI_Comm comm1, MPI_Comm comm2, int *result); int PMPI_Comm_connect(char *port_name, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *newcomm); int PMPI_Comm_create_errhandler(MPI_Comm_errhandler_function *function, MPI_Errhandler *errhandler); int PMPI_Comm_create_keyval(MPI_Comm_copy_attr_function *comm_copy_attr_fn, MPI_Comm_delete_attr_function *comm_delete_attr_fn, int *comm_keyval, void *extra_state); int PMPI_Comm_create(MPI_Comm comm, MPI_Group group, MPI_Comm *newcomm); int PMPI_Comm_delete_attr(MPI_Comm comm, int comm_keyval); int PMPI_Comm_disconnect(MPI_Comm *comm); int PMPI_Comm_dup(MPI_Comm comm, MPI_Comm *newcomm); MPI_Comm PMPI_Comm_f2c(int comm); int PMPI_Comm_free_keyval(int *comm_keyval); int PMPI_Comm_free(MPI_Comm *comm); int PMPI_Comm_get_attr(MPI_Comm comm, int comm_keyval, void *attribute_val, int *flag); int PMPI_Comm_get_errhandler(MPI_Comm comm, MPI_Errhandler *erhandler); int PMPI_Comm_get_name(MPI_Comm comm, char *comm_name, int *resultlen); int PMPI_Comm_get_parent(MPI_Comm *parent); int PMPI_Comm_group(MPI_Comm comm, MPI_Group *group); int PMPI_Comm_join(int fd, MPI_Comm *intercomm); int PMPI_Comm_rank(MPI_Comm comm, int *rank); int PMPI_Comm_remote_group(MPI_Comm comm, MPI_Group *group); int PMPI_Comm_remote_size(MPI_Comm comm, int *size); int PMPI_Comm_set_attr(MPI_Comm comm, int comm_keyval, void *attribute_val); int PMPI_Comm_set_errhandler(MPI_Comm comm, MPI_Errhandler errhandler); int PMPI_Comm_set_name(MPI_Comm comm, char *comm_name); int PMPI_Comm_size(MPI_Comm comm, int *size); int PMPI_Comm_spawn(char *command, char **argv, int maxprocs, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *intercomm, int *array_of_errcodes); int PMPI_Comm_spawn_multiple(int count, char **array_of_commands, char ***array_of_argv, int *array_of_maxprocs, MPI_Info *array_of_info, int root, MPI_Comm comm, MPI_Comm *intercomm, int *array_of_errcodes); int PMPI_Comm_split(MPI_Comm comm, int color, int key, MPI_Comm *newcomm); int PMPI_Comm_test_inter(MPI_Comm comm, int *flag); int PMPI_Dims_create(int nnodes, int ndims, int *dims); int PMPI_Errhandler_c2f(MPI_Errhandler errhandler); int PMPI_Errhandler_create(MPI_Handler_function *function, MPI_Errhandler *errhandler) ; MPI_Errhandler PMPI_Errhandler_f2c(int errhandler); int PMPI_Errhandler_free(MPI_Errhandler *errhandler); int PMPI_Errhandler_get(MPI_Comm comm, MPI_Errhandler *errhandler) ; int PMPI_Errhandler_set(MPI_Comm comm, MPI_Errhandler errhandler) ; int PMPI_Error_class(int errorcode, int *errorclass); int PMPI_Error_string(int errorcode, char *string, int *resultlen); int PMPI_Exscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int PMPI_Iexscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int PMPI_File_c2f(MPI_File file); MPI_File PMPI_File_f2c(int file); int PMPI_File_call_errhandler(MPI_File fh, int errorcode); int PMPI_File_create_errhandler(MPI_File_errhandler_function *function, MPI_Errhandler *errhandler); int PMPI_File_set_errhandler( MPI_File file, MPI_Errhandler errhandler); int PMPI_File_get_errhandler( MPI_File file, MPI_Errhandler *errhandler); int PMPI_File_open(MPI_Comm comm, char *filename, int amode, MPI_Info info, MPI_File *fh); int PMPI_File_close(MPI_File *fh); int PMPI_File_delete(char *filename, MPI_Info info); int PMPI_File_set_size(MPI_File fh, MPI_Offset size); int PMPI_File_preallocate(MPI_File fh, MPI_Offset size); int PMPI_File_get_size(MPI_File fh, MPI_Offset *size); int PMPI_File_get_group(MPI_File fh, MPI_Group *group); int PMPI_File_get_amode(MPI_File fh, int *amode); int PMPI_File_set_info(MPI_File fh, MPI_Info info); int PMPI_File_get_info(MPI_File fh, MPI_Info *info_used); int PMPI_File_set_view(MPI_File fh, MPI_Offset disp, MPI_Datatype etype, MPI_Datatype filetype, char *datarep, MPI_Info info); int PMPI_File_get_view(MPI_File fh, MPI_Offset *disp, MPI_Datatype *etype, MPI_Datatype *filetype, char *datarep); int PMPI_File_read_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_read_at_all(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write_at_all(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_iread_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_iwrite_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_read(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_read_all(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write_all(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_iread(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_iwrite(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_seek(MPI_File fh, MPI_Offset offset, int whence); int PMPI_File_get_position(MPI_File fh, MPI_Offset *offset); int PMPI_File_get_byte_offset(MPI_File fh, MPI_Offset offset, MPI_Offset *disp); int PMPI_File_read_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_iread_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_iwrite_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_read_ordered(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write_ordered(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_seek_shared(MPI_File fh, MPI_Offset offset, int whence); int PMPI_File_get_position_shared(MPI_File fh, MPI_Offset *offset); int PMPI_File_read_at_all_begin(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype); int PMPI_File_read_at_all_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_write_at_all_begin(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype); int PMPI_File_write_at_all_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_read_all_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int PMPI_File_read_all_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_write_all_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int PMPI_File_write_all_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_read_ordered_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int PMPI_File_read_ordered_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_write_ordered_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int PMPI_File_write_ordered_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_get_type_extent(MPI_File fh, MPI_Datatype datatype, MPI_Aint *extent); int PMPI_File_set_atomicity(MPI_File fh, int flag); int PMPI_File_get_atomicity(MPI_File fh, int *flag); int PMPI_File_sync(MPI_File fh); int PMPI_Finalize(void); int PMPI_Finalized(int *flag); int PMPI_Free_mem(void *base); int PMPI_Gather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int PMPI_Igather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Gatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, int root, MPI_Comm comm); int PMPI_Igatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Get_address(void *location, MPI_Aint *address); int PMPI_Get_count(MPI_Status *status, MPI_Datatype datatype, int *count); int PMPI_Get_elements(MPI_Status *status, MPI_Datatype datatype, int *count); int PMPI_Get(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Win win); int PMPI_Get_processor_name(char *name, int *resultlen); int PMPI_Get_version(int *version, int *subversion); int PMPI_Graph_create(MPI_Comm comm_old, int nnodes, int *index, int *edges, int reorder, MPI_Comm *comm_graph); int PMPI_Graph_get(MPI_Comm comm, int maxindex, int maxedges, int *index, int *edges); int PMPI_Graph_map(MPI_Comm comm, int nnodes, int *index, int *edges, int *newrank); int PMPI_Graph_neighbors_count(MPI_Comm comm, int rank, int *nneighbors); int PMPI_Graph_neighbors(MPI_Comm comm, int rank, int maxneighbors, int *neighbors); int PMPI_Graphdims_get(MPI_Comm comm, int *nnodes, int *nedges); int PMPI_Grequest_complete(MPI_Request request); int PMPI_Grequest_start(MPI_Grequest_query_function *query_fn, MPI_Grequest_free_function *free_fn, MPI_Grequest_cancel_function *cancel_fn, void *extra_state, MPI_Request *request); int PMPI_Group_c2f(MPI_Group group); int PMPI_Group_compare(MPI_Group group1, MPI_Group group2, int *result); int PMPI_Group_difference(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int PMPI_Group_excl(MPI_Group group, int n, int *ranks, MPI_Group *newgroup); MPI_Group PMPI_Group_f2c(int group); int PMPI_Group_free(MPI_Group *group); int PMPI_Group_incl(MPI_Group group, int n, int *ranks, MPI_Group *newgroup); int PMPI_Group_intersection(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int PMPI_Group_range_excl(MPI_Group group, int n, int ranges[][3], MPI_Group *newgroup); int PMPI_Group_range_incl(MPI_Group group, int n, int ranges[][3], MPI_Group *newgroup); int PMPI_Group_rank(MPI_Group group, int *rank); int PMPI_Group_size(MPI_Group group, int *size); int PMPI_Group_translate_ranks(MPI_Group group1, int n, int *ranks1, MPI_Group group2, int *ranks2); int PMPI_Group_union(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int PMPI_Ibsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Improbe(int source, int tag, MPI_Comm comm, int *flag, MPI_Message *message, MPI_Status *status); int PMPI_Imrecv(void *buf, int count, MPI_Datatype type, MPI_Message *message, MPI_Request *request); int PMPI_Info_c2f(MPI_Info info); int PMPI_Info_create(MPI_Info *info); int PMPI_Info_delete(MPI_Info info, char *key); int PMPI_Info_dup(MPI_Info info, MPI_Info *newinfo); MPI_Info PMPI_Info_f2c(int info); int PMPI_Info_free(MPI_Info *info); int PMPI_Info_get(MPI_Info info, char *key, int valuelen, char *value, int *flag); int PMPI_Info_get_nkeys(MPI_Info info, int *nkeys); int PMPI_Info_get_nthkey(MPI_Info info, int n, char *key); int PMPI_Info_get_valuelen(MPI_Info info, char *key, int *valuelen, int *flag); int PMPI_Info_set(MPI_Info info, char *key, char *value); int PMPI_Init(int *argc, char ***argv); int PMPI_Initialized(int *flag); int PMPI_Init_thread(int *argc, char ***argv, int required, int *provided); int PMPI_Intercomm_create(MPI_Comm local_comm, int local_leader, MPI_Comm bridge_comm, int remote_leader, int tag, MPI_Comm *newintercomm); int PMPI_Intercomm_merge(MPI_Comm intercomm, int high, MPI_Comm *newintercomm); int PMPI_Iprobe(int source, int tag, MPI_Comm comm, int *flag, MPI_Status *status); int PMPI_Irecv(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Irsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Isend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Issend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Is_thread_main(int *flag); int PMPI_Keyval_create(MPI_Copy_function *copy_fn, MPI_Delete_function *delete_fn, int *keyval, void *extra_state) ; int PMPI_Keyval_free(int *keyval) ; int PMPI_Lookup_name(char *service_name, MPI_Info info, char *port_name); int PMPI_Message_c2f(MPI_Message message); MPI_Message PMPI_Message_f2c(int message); int PMPI_Mprobe(int source, int tag, MPI_Comm comm, MPI_Message *message, MPI_Status *status); int PMPI_Mrecv(void *buf, int count, MPI_Datatype type, MPI_Message *message, MPI_Status *status); int PMPI_Op_c2f(MPI_Op op); int PMPI_Op_commutative(MPI_Op op, int *commute); int PMPI_Op_create(MPI_User_function *function, int commute, MPI_Op *op); int PMPI_Open_port(MPI_Info info, char *port_name); MPI_Op PMPI_Op_f2c(int op); int PMPI_Op_free(MPI_Op *op); int PMPI_Pack_external(char *datarep, void *inbuf, int incount, MPI_Datatype datatype, void *outbuf, MPI_Aint outsize, MPI_Aint *position); int PMPI_Pack_external_size(char *datarep, int incount, MPI_Datatype datatype, MPI_Aint *size); int PMPI_Pack(void *inbuf, int incount, MPI_Datatype datatype, void *outbuf, int outsize, int *position, MPI_Comm comm); int PMPI_Pack_size(int incount, MPI_Datatype datatype, MPI_Comm comm, int *size); int PMPI_Pcontrol(const int level, ...); int PMPI_Probe(int source, int tag, MPI_Comm comm, MPI_Status *status); int PMPI_Publish_name(char *service_name, MPI_Info info, char *port_name); int PMPI_Put(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Win win); int PMPI_Query_thread(int *provided); int PMPI_Recv_init(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Recv(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Status *status); int PMPI_Reduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, int root, MPI_Comm comm); int PMPI_Ireduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Reduce_local(void *inbuf, void *inoutbuf, int count, MPI_Datatype datatype, MPI_Op); int PMPI_Reduce_scatter(void *sendbuf, void *recvbuf, int *recvcounts, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int PMPI_Ireduce_scatter(void *sendbuf, void *recvbuf, int *recvcounts, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int PMPI_Reduce_scatter_block(void *sendbuf, void *recvbuf, int recvcount, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int PMPI_Ireduce_scatter_block(void *sendbuf, void *recvbuf, int recvcount, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int PMPI_Register_datarep(char *datarep, MPI_Datarep_conversion_function *read_conversion_fn, MPI_Datarep_conversion_function *write_conversion_fn, MPI_Datarep_extent_function *dtype_file_extent_fn, void *extra_state); int PMPI_Request_c2f(MPI_Request request); MPI_Request PMPI_Request_f2c(int request); int PMPI_Request_free(MPI_Request *request); int PMPI_Request_get_status(MPI_Request request, int *flag, MPI_Status *status); int PMPI_Rsend(void *ibuf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int PMPI_Rsend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Scan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int PMPI_Iscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int PMPI_Scatter(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int PMPI_Iscatter(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Scatterv(void *sendbuf, int *sendcounts, int *displs, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int PMPI_Iscatterv(void *sendbuf, int *sendcounts, int *displs, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Send_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Send(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int PMPI_Sendrecv(void *sendbuf, int sendcount, MPI_Datatype sendtype, int dest, int sendtag, void *recvbuf, int recvcount, MPI_Datatype recvtype, int source, int recvtag, MPI_Comm comm, MPI_Status *status); int PMPI_Sendrecv_replace(void * buf, int count, MPI_Datatype datatype, int dest, int sendtag, int source, int recvtag, MPI_Comm comm, MPI_Status *status); int PMPI_Ssend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Ssend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int PMPI_Start(MPI_Request *request); int PMPI_Startall(int count, MPI_Request *array_of_requests); int PMPI_Status_c2f(MPI_Status *c_status, int *f_status); int PMPI_Status_f2c(int *f_status, MPI_Status *c_status); int PMPI_Status_set_cancelled(MPI_Status *status, int flag); int PMPI_Status_set_elements(MPI_Status *status, MPI_Datatype datatype, int count); int PMPI_Testall(int count, MPI_Request array_of_requests[], int *flag, MPI_Status array_of_statuses[]); int PMPI_Testany(int count, MPI_Request array_of_requests[], int *index, int *flag, MPI_Status *status); int PMPI_Test(MPI_Request *request, int *flag, MPI_Status *status); int PMPI_Test_cancelled(MPI_Status *status, int *flag); int PMPI_Testsome(int incount, MPI_Request array_of_requests[], int *outcount, int array_of_indices[], MPI_Status array_of_statuses[]); int PMPI_Topo_test(MPI_Comm comm, int *status); int PMPI_Type_c2f(MPI_Datatype datatype); int PMPI_Type_commit(MPI_Datatype *type); int PMPI_Type_contiguous(int count, MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_darray(int size, int rank, int ndims, int gsize_array[], int distrib_array[], int darg_array[], int psize_array[], int order, MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_f90_complex(int p, int r, MPI_Datatype *newtype); int PMPI_Type_create_f90_integer(int r, MPI_Datatype *newtype); int PMPI_Type_create_f90_real(int p, int r, MPI_Datatype *newtype); int PMPI_Type_create_hindexed(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_hvector(int count, int blocklength, MPI_Aint stride, MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_keyval(MPI_Type_copy_attr_function *type_copy_attr_fn, MPI_Type_delete_attr_function *type_delete_attr_fn, int *type_keyval, void *extra_state); int PMPI_Type_create_indexed_block(int count, int blocklength, int array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_struct(int count, int array_of_block_lengths[], MPI_Aint array_of_displacements[], MPI_Datatype array_of_types[], MPI_Datatype *newtype); int PMPI_Type_create_subarray(int ndims, int size_array[], int subsize_array[], int start_array[], int order, MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_resized(MPI_Datatype oldtype, MPI_Aint lb, MPI_Aint extent, MPI_Datatype *newtype); int PMPI_Type_delete_attr(MPI_Datatype type, int type_keyval); int PMPI_Type_dup(MPI_Datatype type, MPI_Datatype *newtype); int PMPI_Type_extent(MPI_Datatype type, MPI_Aint *extent) ; int PMPI_Type_free(MPI_Datatype *type); int PMPI_Type_free_keyval(int *type_keyval); MPI_Datatype PMPI_Type_f2c(int datatype); int PMPI_Type_get_attr(MPI_Datatype type, int type_keyval, void *attribute_val, int *flag); int PMPI_Type_get_contents(MPI_Datatype mtype, int max_integers, int max_addresses, int max_datatypes, int array_of_integers[], MPI_Aint array_of_addresses[], MPI_Datatype array_of_datatypes[]); int PMPI_Type_get_envelope(MPI_Datatype type, int *num_integers, int *num_addresses, int *num_datatypes, int *combiner); int PMPI_Type_get_extent(MPI_Datatype type, MPI_Aint *lb, MPI_Aint *extent); int PMPI_Type_get_name(MPI_Datatype type, char *type_name, int *resultlen); int PMPI_Type_get_true_extent(MPI_Datatype datatype, MPI_Aint *true_lb, MPI_Aint *true_extent); int PMPI_Type_hindexed(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype) ; int PMPI_Type_hvector(int count, int blocklength, MPI_Aint stride, MPI_Datatype oldtype, MPI_Datatype *newtype) ; int PMPI_Type_indexed(int count, int array_of_blocklengths[], int array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_lb(MPI_Datatype type, MPI_Aint *lb) ; int PMPI_Type_match_size(int typeclass, int size, MPI_Datatype *type); int PMPI_Type_set_attr(MPI_Datatype type, int type_keyval, void *attr_val); int PMPI_Type_set_name(MPI_Datatype type, char *type_name); int PMPI_Type_size(MPI_Datatype type, int *size); int PMPI_Type_struct(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype array_of_types[], MPI_Datatype *newtype) ; int PMPI_Type_ub(MPI_Datatype mtype, MPI_Aint *ub) ; int PMPI_Type_vector(int count, int blocklength, int stride, MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Unpack(void *inbuf, int insize, int *position, void *outbuf, int outcount, MPI_Datatype datatype, MPI_Comm comm); int PMPI_Unpublish_name(char *service_name, MPI_Info info, char *port_name); int PMPI_Unpack_external (char *datarep, void *inbuf, MPI_Aint insize, MPI_Aint *position, void *outbuf, int outcount, MPI_Datatype datatype); int PMPI_Waitall(int count, MPI_Request *array_of_requests, MPI_Status *array_of_statuses); int PMPI_Waitany(int count, MPI_Request *array_of_requests, int *index, MPI_Status *status); int PMPI_Wait(MPI_Request *request, MPI_Status *status); int PMPI_Waitsome(int incount, MPI_Request *array_of_requests, int *outcount, int *array_of_indices, MPI_Status *array_of_statuses); int PMPI_Win_c2f(MPI_Win win); int PMPI_Win_call_errhandler(MPI_Win win, int errorcode); int PMPI_Win_complete(MPI_Win win); int PMPI_Win_create(void *base, MPI_Aint size, int disp_unit, MPI_Info info, MPI_Comm comm, MPI_Win *win); int PMPI_Win_create_errhandler(MPI_Win_errhandler_function *function, MPI_Errhandler *errhandler); int PMPI_Win_create_keyval(MPI_Win_copy_attr_function *win_copy_attr_fn, MPI_Win_delete_attr_function *win_delete_attr_fn, int *win_keyval, void *extra_state); int PMPI_Win_delete_attr(MPI_Win win, int win_keyval); MPI_Win PMPI_Win_f2c(int win); int PMPI_Win_fence(int assert, MPI_Win win); int PMPI_Win_free(MPI_Win *win); int PMPI_Win_free_keyval(int *win_keyval); int PMPI_Win_get_attr(MPI_Win win, int win_keyval, void *attribute_val, int *flag); int PMPI_Win_get_errhandler(MPI_Win win, MPI_Errhandler *errhandler); int PMPI_Win_get_group(MPI_Win win, MPI_Group *group); int PMPI_Win_get_name(MPI_Win win, char *win_name, int *resultlen); int PMPI_Win_lock(int lock_type, int rank, int assert, MPI_Win win); int PMPI_Win_post(MPI_Group group, int assert, MPI_Win win); int PMPI_Win_set_attr(MPI_Win win, int win_keyval, void *attribute_val); int PMPI_Win_set_errhandler(MPI_Win win, MPI_Errhandler errhandler); int PMPI_Win_set_name(MPI_Win win, char *win_name); int PMPI_Win_start(MPI_Group group, int assert, MPI_Win win); int PMPI_Win_test(MPI_Win win, int *flag); int PMPI_Win_unlock(int rank, MPI_Win win); int PMPI_Win_wait(MPI_Win win); double PMPI_Wtick(void); double PMPI_Wtime(void); #line 2281 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Found header files ['mpi.h'] in [] Popping language C ================================================================================ TEST configureConversion from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:212) TESTING: configureConversion from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:212) Check for the functions which convert communicators between C and Fortran - Define HAVE_MPI_COMM_F2C and HAVE_MPI_COMM_C2F if they are present - Some older MPI 1 implementations are missing these All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { if (MPI_Comm_f2c((MPI_Fint)0)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_MPI_COMM_F2C" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { if (MPI_Comm_c2f(MPI_COMM_WORLD)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_MPI_COMM_C2F" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c", line 6: warning: variable "a" was declared but never referenced MPI_Fint a; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_Fint a; ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_MPI_FINT" to "1" ================================================================================ TEST configureMPI2 from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:180) TESTING: configureMPI2 from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:180) Check for functions added to the interface in MPI-2 Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int flag;if (MPI_Finalized(&flag)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_MPI_FINALIZED" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { if (MPI_Allreduce(MPI_IN_PLACE,0, 1, MPI_INT, MPI_SUM, MPI_COMM_SELF)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_MPI_IN_PLACE" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c", line 6: warning: a value of type "int" cannot be used to initialize an entity of type "MPI_Datatype" int count=2; int blocklens[2]={0,1}; MPI_Aint indices[2]={0,1}; MPI_Datatype old_types[2]={0,1}; MPI_Datatype *newtype = 0; ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c", line 6: warning: conversion of nonzero integer to pointer int count=2; int blocklens[2]={0,1}; MPI_Aint indices[2]={0,1}; MPI_Datatype old_types[2]={0,1}; MPI_Datatype *newtype = 0; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { int count=2; int blocklens[2]={0,1}; MPI_Aint indices[2]={0,1}; MPI_Datatype old_types[2]={0,1}; MPI_Datatype *newtype = 0; if (MPI_Type_create_struct(count, blocklens, indices, old_types, newtype)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_Comm_errhandler_fn * p_err_fun = 0; MPI_Errhandler * p_errhandler = 0; if (MPI_Comm_create_errhandler(p_err_fun,p_errhandler)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { if (MPI_Comm_set_errhandler(MPI_COMM_WORLD,MPI_ERRORS_RETURN)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl ================================================================================ TEST configureTypes from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:232) TESTING: configureTypes from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:232) Checking for MPI types Checking for size of type: MPI_Comm Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif #define MPICH_IGNORE_CXX_SEEK #define MPICH_SKIP_MPICXX 1 #define OMPI_SKIP_MPICXX 1 #include int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(MPI_Comm)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Popping language C Defined "SIZEOF_MPI_COMM" to "8" Checking for size of type: MPI_Fint Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif #define MPICH_IGNORE_CXX_SEEK #define MPICH_SKIP_MPICXX 1 #define OMPI_SKIP_MPICXX 1 #include int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(MPI_Fint)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest Popping language C Defined "SIZEOF_MPI_FINT" to "4" ================================================================================ TEST configureMPITypes from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:244) TESTING: configureMPITypes from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:244) Checking for MPI Datatype handles Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif #include int main() { MPI_Aint size; int ierr; MPI_Init(0,0); ierr = MPI_Type_extent(MPI_LONG_DOUBLE, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif #include int main() { MPI_Aint size; int ierr; MPI_Init(0,0); ierr = MPI_Type_extent(MPI_LONG_DOUBLE, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest ERROR while running executable: Could not execute "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest": [d01-037:17214] [mpi::ess-ple::jrm-init-failure] [[INVALID],INVALID] Error caused by PLE. [errno:26674688] [d01-037:17214] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_errmgr_base_error_abort+0x84) [0xffffffff10e58404] [d01-037:17214] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0 [0xffffffff10e5b220] [d01-037:17214] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_init+0x120) [0xffffffff10e1aa60] [d01-037:17214] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(ompi_mpi_init+0x228) [0xffffffff10bfbe28] [d01-037:17214] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(MPI_Init+0x144) [0xffffffff10c2c804] [d01-037:17214] /opt/FJSVtclang/GM-1.2.0-20/lib64/libtrtmet_c.so.1(MPI_Init+0x2c) [0xffffffff0015d668] [d01-037:17214] /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest(main+0x14) [0x100d14] [d01-037:17214] /lib64/libc.so.6(__libc_start_main+0x194) [0xffffffff1261b81c] [d01-037:17214] /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest [0x100bac] [d01-037:17214] [mpi::ess-ple::init-failure] [[INVALID],INVALID] PLE is not yet initialized. Popping language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif #include int main() { MPI_Aint size; int ierr; MPI_Init(0,0); ierr = MPI_Type_extent(MPI_INT64_T, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif #include int main() { MPI_Aint size; int ierr; MPI_Init(0,0); ierr = MPI_Type_extent(MPI_INT64_T, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest ERROR while running executable: Could not execute "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest": [d01-037:17243] [mpi::ess-ple::jrm-init-failure] [[INVALID],INVALID] Error caused by PLE. [errno:26674688] [d01-037:17243] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_errmgr_base_error_abort+0x84) [0xffffffff10e58404] [d01-037:17243] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0 [0xffffffff10e5b220] [d01-037:17243] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_init+0x120) [0xffffffff10e1aa60] [d01-037:17243] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(ompi_mpi_init+0x228) [0xffffffff10bfbe28] [d01-037:17243] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(MPI_Init+0x144) [0xffffffff10c2c804] [d01-037:17243] /opt/FJSVtclang/GM-1.2.0-20/lib64/libtrtmet_c.so.1(MPI_Init+0x2c) [0xffffffff0015d668] [d01-037:17243] /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest(main+0x14) [0x100d14] [d01-037:17243] /lib64/libc.so.6(__libc_start_main+0x194) [0xffffffff1261b81c] [d01-037:17243] /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest [0x100bac] [d01-037:17243] [mpi::ess-ple::init-failure] [[INVALID],INVALID] PLE is not yet initialized. Popping language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif #include int main() { MPI_Aint size; int ierr; MPI_Init(0,0); ierr = MPI_Type_extent(MPI_C_DOUBLE_COMPLEX, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif #include int main() { MPI_Aint size; int ierr; MPI_Init(0,0); ierr = MPI_Type_extent(MPI_C_DOUBLE_COMPLEX, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest ERROR while running executable: Could not execute "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest": [d01-037:17272] [mpi::ess-ple::jrm-init-failure] [[INVALID],INVALID] Error caused by PLE. [errno:26674688] [d01-037:17272] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_errmgr_base_error_abort+0x84) [0xffffffff10e58404] [d01-037:17272] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0 [0xffffffff10e5b220] [d01-037:17272] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_init+0x120) [0xffffffff10e1aa60] [d01-037:17272] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(ompi_mpi_init+0x228) [0xffffffff10bfbe28] [d01-037:17272] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(MPI_Init+0x144) [0xffffffff10c2c804] [d01-037:17272] /opt/FJSVtclang/GM-1.2.0-20/lib64/libtrtmet_c.so.1(MPI_Init+0x2c) [0xffffffff0015d668] [d01-037:17272] /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest(main+0x14) [0x100d14] [d01-037:17272] /lib64/libc.so.6(__libc_start_main+0x194) [0xffffffff1261b81c] [d01-037:17272] /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest [0x100bac] [d01-037:17272] [mpi::ess-ple::init-failure] [[INVALID],INVALID] PLE is not yet initialized. Popping language C ================================================================================ TEST configureMissingPrototypes from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:318) TESTING: configureMissingPrototypes from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:318) Checks for missing prototypes, which it adds to petscfix.h ================================================================================ TEST SGIMPICheck from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:337) TESTING: SGIMPICheck from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:337) Returns true if SGI MPI is used Checking for functions [MPI_SGI_barrier] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_SGI_barrier(); static void _check_MPI_SGI_barrier() { MPI_SGI_barrier(); } int main() { _check_MPI_SGI_barrier();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o: In function `_check_MPI_SGI_barrier': conftest.c:(.text+0x4): undefined reference to `MPI_SGI_barrier' Popping language C SGI MPI test failure ================================================================================ TEST CxxMPICheck from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:347) TESTING: CxxMPICheck from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:347) Make sure C++ can compile and link Pushing language Cxx Checking for header mpi.h Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { ; return 0; } Checking for C++ MPI_Finalize() Checking for functions [MPI_Finalize] in library [] [] Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.cc Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.cc", line 5: warning: variable "ierr" was set but never used static void _check_MPI_Finalize() { int ierr; ^ Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_MPI_Finalize() { int ierr; ierr = MPI_Finalize();; } int main() { _check_MPI_Finalize();; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language Cxx Popping language Cxx ================================================================================ TEST FortranMPICheck from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:365) TESTING: FortranMPICheck from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:365) Make sure fortran include [mpif.h] and library symbols are found Pushing language FC Checking for header mpif.h Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.F Successful compile: Source: program main #include "mpif.h" end Checking for fortran mpi_init() Checking for functions [] in library [] [] Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.F Successful compile: Source: program main #include "mpif.h" integer ierr call mpi_init(ierr) end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language FC Checking for mpi.mod Checking for functions [] in library [] [] Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.F Successful compile: Source: program main use mpi integer ierr,rank call mpi_init(ierr) call mpi_comm_rank(MPI_COMM_WORLD,rank,ierr) end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language FC Defined "HAVE_MPI_F90MODULE" to "1" Popping language FC ================================================================================ TEST configureIO from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:390) TESTING: configureIO from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:390) Check for the functions in MPI/IO - Define HAVE_MPIIO if they are present - Some older MPI 1 implementations are missing these Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_Aint lb, extent; if (MPI_Type_get_extent(MPI_INT, &lb, &extent)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c", line 9: warning: variable "fh" is used before its value is set if (MPI_File_write_all(fh, buf, 1, MPI_INT, &status)); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c", line 9: warning: variable "buf" is used before its value is set if (MPI_File_write_all(fh, buf, 1, MPI_INT, &status)); ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_File fh; void *buf; MPI_Status status; if (MPI_File_write_all(fh, buf, 1, MPI_INT, &status)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c", line 9: warning: variable "fh" is used before its value is set if (MPI_File_read_all(fh, buf, 1, MPI_INT, &status)); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c", line 9: warning: variable "buf" is used before its value is set if (MPI_File_read_all(fh, buf, 1, MPI_INT, &status)); ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_File fh; void *buf; MPI_Status status; if (MPI_File_read_all(fh, buf, 1, MPI_INT, &status)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c", line 9: warning: variable "fh" is used before its value is set if (MPI_File_set_view(fh, disp, MPI_INT, MPI_INT, "", info)); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c", line 9: warning: variable "disp" is used before its value is set if (MPI_File_set_view(fh, disp, MPI_INT, MPI_INT, "", info)); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c", line 9: warning: variable "info" is used before its value is set if (MPI_File_set_view(fh, disp, MPI_INT, MPI_INT, "", info)); ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_File fh; MPI_Offset disp; MPI_Info info; if (MPI_File_set_view(fh, disp, MPI_INT, MPI_INT, "", info)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c", line 8: warning: variable "info" is used before its value is set if (MPI_File_open(MPI_COMM_SELF, "", 0, info, &fh)); ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_File fh; MPI_Info info; if (MPI_File_open(MPI_COMM_SELF, "", 0, info, &fh)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c", line 7: warning: variable "info" was declared but never referenced MPI_Info info; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_File fh; MPI_Info info; if (MPI_File_close(&fh)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_MPIIO" to "1" ================================================================================ TEST findMPIInc from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:452) TESTING: findMPIInc from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:452) Find MPI include paths from "mpicc -show" Executing: mpifcc -show stdout: /opt/FJSVtclang/GM-1.2.0-20/bin/fcc -Kident_mpi -mt -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lm -lnsl -lutil compilers: Checking arg /opt/FJSVtclang/GM-1.2.0-20/bin/fcc compilers: Checking arg -Kident_mpi compilers: Checking arg -mt compilers: Checking arg -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu compilers: Found include directory: /opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu compilers: Checking arg -L/opt/FJSVpxtof/sparc64fx/lib64 compilers: Checking arg -L/opt/FJSVtclang/GM-1.2.0-20/lib64 compilers: Checking arg -lmpi compilers: Checking arg -ltofucom compilers: Checking arg -ltofutop compilers: Checking arg -lm compilers: Checking arg -lnsl compilers: Checking arg -lutil ================================================================================ TEST checkMPICHorOpenMPI from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:427) TESTING: checkMPICHorOpenMPI from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:427) Determine if MPICH_NUMVERSION or OMPI_MAJOR_VERSION exist in mpi.h Used for consistency checking of MPI installation at compile time Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Possible ERROR while running compiler: exit code 512 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c", line 4: error: identifier "MPICH_NUMVERSION" is undefined int mpich_ver = MPICH_NUMVERSION; ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include int mpich_ver = MPICH_NUMVERSION; int main() { ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int ompi_major = OMPI_MAJOR_VERSION; int ompi_minor = OMPI_MINOR_VERSION; int ompi_release = OMPI_RELEASE_VERSION; int main() { ; return 0; } Source: #include "confdefs.h" #include "conffix.h" #include int ompi_major = OMPI_MAJOR_VERSION; int ompi_minor = OMPI_MINOR_VERSION; int ompi_release = OMPI_RELEASE_VERSION; Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c" #line 1 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 212 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef long ptrdiff_t; #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef int wchar_t; #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 225 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 1 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi_portable_platform.h" #line 343 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi_portable_platform.h" #line 386 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi_portable_platform.h" #line 258 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 278 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" typedef ptrdiff_t MPI_Aint; typedef long long MPI_Offset; typedef struct ompi_communicator_t *MPI_Comm; typedef struct ompi_datatype_t *MPI_Datatype; typedef struct ompi_errhandler_t *MPI_Errhandler; typedef struct ompi_file_t *MPI_File; typedef struct ompi_group_t *MPI_Group; typedef struct ompi_info_t *MPI_Info; typedef struct ompi_op_t *MPI_Op; typedef struct ompi_request_t *MPI_Request; typedef struct ompi_message_t *MPI_Message; typedef struct ompi_status_public_t MPI_Status; typedef struct ompi_win_t *MPI_Win; #pragma pack(4) struct ompi_status_public_t { int MPI_SOURCE; int MPI_TAG; int MPI_ERROR; unsigned long _cancelled : 1; unsigned long _ucount : 63; }; #pragma pack() typedef struct ompi_status_public_t ompi_status_public_t; typedef int (MPI_Copy_function)(MPI_Comm, int, void *, void *, void *, int *); typedef int (MPI_Delete_function)(MPI_Comm, int, void *, void *); typedef int (MPI_Datarep_extent_function)(MPI_Datatype, MPI_Aint *, void *); typedef int (MPI_Datarep_conversion_function)(void *, MPI_Datatype, int, void *, MPI_Offset, void *); typedef void (MPI_Comm_errhandler_function)(MPI_Comm *, int *, ...); typedef MPI_Comm_errhandler_function MPI_Comm_errhandler_fn ; typedef void (ompi_file_errhandler_fn)(MPI_File *, int *, ...); typedef ompi_file_errhandler_fn MPI_File_errhandler_fn ; typedef ompi_file_errhandler_fn MPI_File_errhandler_function; typedef void (MPI_Win_errhandler_function)(MPI_Win *, int *, ...); typedef MPI_Win_errhandler_function MPI_Win_errhandler_fn ; typedef void (MPI_Handler_function)(MPI_Comm *, int *, ...); typedef void (MPI_User_function)(void *, void *, int *, MPI_Datatype *); typedef int (MPI_Comm_copy_attr_function)(MPI_Comm, int, void *, void *, void *, int *); typedef int (MPI_Comm_delete_attr_function)(MPI_Comm, int, void *, void *); typedef int (MPI_Type_copy_attr_function)(MPI_Datatype, int, void *, void *, void *, int *); typedef int (MPI_Type_delete_attr_function)(MPI_Datatype, int, void *, void *); typedef int (MPI_Win_copy_attr_function)(MPI_Win, int, void *, void *, void *, int *); typedef int (MPI_Win_delete_attr_function)(MPI_Win, int, void *, void *); typedef int (MPI_Grequest_query_function)(void *, MPI_Status *); typedef int (MPI_Grequest_free_function)(void *); typedef int (MPI_Grequest_cancel_function)(void *, int); #line 432 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 453 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 469 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" enum { MPI_TAG_UB, MPI_HOST, MPI_IO, MPI_WTIME_IS_GLOBAL, MPI_APPNUM, MPI_LASTUSEDCODE, MPI_UNIVERSE_SIZE, MPI_WIN_BASE, MPI_WIN_SIZE, MPI_WIN_DISP_UNIT, IMPI_CLIENT_SIZE, IMPI_CLIENT_COLOR, IMPI_HOST_SIZE, IMPI_HOST_COLOR }; #line 582 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" enum { MPI_IDENT, MPI_CONGRUENT, MPI_SIMILAR, MPI_UNEQUAL }; enum { MPI_THREAD_SINGLE, MPI_THREAD_FUNNELED, MPI_THREAD_SERIALIZED, MPI_THREAD_MULTIPLE }; enum { MPI_COMBINER_NAMED, MPI_COMBINER_DUP, MPI_COMBINER_CONTIGUOUS, MPI_COMBINER_VECTOR, MPI_COMBINER_HVECTOR_INTEGER, MPI_COMBINER_HVECTOR, MPI_COMBINER_INDEXED, MPI_COMBINER_HINDEXED_INTEGER, MPI_COMBINER_HINDEXED, MPI_COMBINER_INDEXED_BLOCK, MPI_COMBINER_STRUCT_INTEGER, MPI_COMBINER_STRUCT, MPI_COMBINER_SUBARRAY, MPI_COMBINER_DARRAY, MPI_COMBINER_F90_REAL, MPI_COMBINER_F90_COMPLEX, MPI_COMBINER_F90_INTEGER, MPI_COMBINER_RESIZED, MPI_COMBINER_HINDEXED_BLOCK }; #line 649 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" int OMPI_C_MPI_TYPE_NULL_DELETE_FN( MPI_Datatype datatype, int type_keyval, void* attribute_val_out, void* extra_state ); int OMPI_C_MPI_TYPE_NULL_COPY_FN( MPI_Datatype datatype, int type_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); int OMPI_C_MPI_TYPE_DUP_FN( MPI_Datatype datatype, int type_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); int OMPI_C_MPI_COMM_NULL_DELETE_FN( MPI_Comm comm, int comm_keyval, void* attribute_val_out, void* extra_state ); int OMPI_C_MPI_COMM_NULL_COPY_FN( MPI_Comm comm, int comm_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); int OMPI_C_MPI_COMM_DUP_FN( MPI_Comm comm, int comm_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); int OMPI_C_MPI_NULL_DELETE_FN( MPI_Comm comm, int comm_keyval, void* attribute_val_out, void* extra_state ) ; int OMPI_C_MPI_NULL_COPY_FN( MPI_Comm comm, int comm_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ) ; int OMPI_C_MPI_DUP_FN( MPI_Comm comm, int comm_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ) ; int OMPI_C_MPI_WIN_NULL_DELETE_FN( MPI_Win window, int win_keyval, void* attribute_val_out, void* extra_state ); int OMPI_C_MPI_WIN_NULL_COPY_FN( MPI_Win window, int win_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); int OMPI_C_MPI_WIN_DUP_FN( MPI_Win window, int win_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); extern struct ompi_predefined_communicator_t ompi_mpi_comm_world; extern struct ompi_predefined_communicator_t ompi_mpi_comm_self; extern struct ompi_predefined_communicator_t ompi_mpi_comm_null; extern struct ompi_predefined_group_t ompi_mpi_group_empty; extern struct ompi_predefined_group_t ompi_mpi_group_null; extern struct ompi_predefined_request_t ompi_request_null; extern struct ompi_predefined_message_t ompi_message_null; extern struct ompi_predefined_message_t ompi_message_no_proc; extern struct ompi_predefined_op_t ompi_mpi_op_null; extern struct ompi_predefined_op_t ompi_mpi_op_min; extern struct ompi_predefined_op_t ompi_mpi_op_max; extern struct ompi_predefined_op_t ompi_mpi_op_sum; extern struct ompi_predefined_op_t ompi_mpi_op_prod; extern struct ompi_predefined_op_t ompi_mpi_op_land; extern struct ompi_predefined_op_t ompi_mpi_op_band; extern struct ompi_predefined_op_t ompi_mpi_op_lor; extern struct ompi_predefined_op_t ompi_mpi_op_bor; extern struct ompi_predefined_op_t ompi_mpi_op_lxor; extern struct ompi_predefined_op_t ompi_mpi_op_bxor; extern struct ompi_predefined_op_t ompi_mpi_op_maxloc; extern struct ompi_predefined_op_t ompi_mpi_op_minloc; extern struct ompi_predefined_op_t ompi_mpi_op_replace; extern struct ompi_predefined_datatype_t ompi_mpi_datatype_null; extern struct ompi_predefined_datatype_t ompi_mpi_lb ; extern struct ompi_predefined_datatype_t ompi_mpi_ub ; extern struct ompi_predefined_datatype_t ompi_mpi_char; extern struct ompi_predefined_datatype_t ompi_mpi_signed_char; extern struct ompi_predefined_datatype_t ompi_mpi_unsigned_char; extern struct ompi_predefined_datatype_t ompi_mpi_byte; extern struct ompi_predefined_datatype_t ompi_mpi_short; extern struct ompi_predefined_datatype_t ompi_mpi_unsigned_short; extern struct ompi_predefined_datatype_t ompi_mpi_int; extern struct ompi_predefined_datatype_t ompi_mpi_unsigned; extern struct ompi_predefined_datatype_t ompi_mpi_long; extern struct ompi_predefined_datatype_t ompi_mpi_unsigned_long; extern struct ompi_predefined_datatype_t ompi_mpi_long_long_int; extern struct ompi_predefined_datatype_t ompi_mpi_unsigned_long_long; extern struct ompi_predefined_datatype_t ompi_mpi_float; extern struct ompi_predefined_datatype_t ompi_mpi_double; extern struct ompi_predefined_datatype_t ompi_mpi_long_double; extern struct ompi_predefined_datatype_t ompi_mpi_wchar; extern struct ompi_predefined_datatype_t ompi_mpi_packed; extern struct ompi_predefined_datatype_t ompi_mpi_cxx_bool; extern struct ompi_predefined_datatype_t ompi_mpi_cxx_cplex; extern struct ompi_predefined_datatype_t ompi_mpi_cxx_dblcplex; extern struct ompi_predefined_datatype_t ompi_mpi_cxx_ldblcplex; extern struct ompi_predefined_datatype_t ompi_mpi_logic; extern struct ompi_predefined_datatype_t ompi_mpi_character; extern struct ompi_predefined_datatype_t ompi_mpi_integer; extern struct ompi_predefined_datatype_t ompi_mpi_real; extern struct ompi_predefined_datatype_t ompi_mpi_dblprec; extern struct ompi_predefined_datatype_t ompi_mpi_cplex; extern struct ompi_predefined_datatype_t ompi_mpi_dblcplex; extern struct ompi_predefined_datatype_t ompi_mpi_ldblcplex; extern struct ompi_predefined_datatype_t ompi_mpi_2int; extern struct ompi_predefined_datatype_t ompi_mpi_2integer; extern struct ompi_predefined_datatype_t ompi_mpi_2real; extern struct ompi_predefined_datatype_t ompi_mpi_2dblprec; extern struct ompi_predefined_datatype_t ompi_mpi_2cplex; extern struct ompi_predefined_datatype_t ompi_mpi_2dblcplex; extern struct ompi_predefined_datatype_t ompi_mpi_float_int; extern struct ompi_predefined_datatype_t ompi_mpi_double_int; extern struct ompi_predefined_datatype_t ompi_mpi_longdbl_int; extern struct ompi_predefined_datatype_t ompi_mpi_short_int; extern struct ompi_predefined_datatype_t ompi_mpi_long_int; extern struct ompi_predefined_datatype_t ompi_mpi_logical1; extern struct ompi_predefined_datatype_t ompi_mpi_logical2; extern struct ompi_predefined_datatype_t ompi_mpi_logical4; extern struct ompi_predefined_datatype_t ompi_mpi_logical8; extern struct ompi_predefined_datatype_t ompi_mpi_integer1; extern struct ompi_predefined_datatype_t ompi_mpi_integer2; extern struct ompi_predefined_datatype_t ompi_mpi_integer4; extern struct ompi_predefined_datatype_t ompi_mpi_integer8; extern struct ompi_predefined_datatype_t ompi_mpi_integer16; extern struct ompi_predefined_datatype_t ompi_mpi_real2; extern struct ompi_predefined_datatype_t ompi_mpi_real4; extern struct ompi_predefined_datatype_t ompi_mpi_real8; extern struct ompi_predefined_datatype_t ompi_mpi_real16; extern struct ompi_predefined_datatype_t ompi_mpi_complex8; extern struct ompi_predefined_datatype_t ompi_mpi_complex16; extern struct ompi_predefined_datatype_t ompi_mpi_complex32; extern struct ompi_predefined_datatype_t ompi_mpi_int8_t; extern struct ompi_predefined_datatype_t ompi_mpi_uint8_t; extern struct ompi_predefined_datatype_t ompi_mpi_int16_t; extern struct ompi_predefined_datatype_t ompi_mpi_uint16_t; extern struct ompi_predefined_datatype_t ompi_mpi_int32_t; extern struct ompi_predefined_datatype_t ompi_mpi_uint32_t; extern struct ompi_predefined_datatype_t ompi_mpi_int64_t; extern struct ompi_predefined_datatype_t ompi_mpi_uint64_t; extern struct ompi_predefined_datatype_t ompi_mpi_aint; extern struct ompi_predefined_datatype_t ompi_mpi_offset; extern struct ompi_predefined_datatype_t ompi_mpi_c_bool; extern struct ompi_predefined_datatype_t ompi_mpi_c_complex; extern struct ompi_predefined_datatype_t ompi_mpi_c_float_complex; extern struct ompi_predefined_datatype_t ompi_mpi_c_double_complex; extern struct ompi_predefined_datatype_t ompi_mpi_c_long_double_complex; extern struct ompi_predefined_errhandler_t ompi_mpi_errhandler_null; extern struct ompi_predefined_errhandler_t ompi_mpi_errors_are_fatal; extern struct ompi_predefined_errhandler_t ompi_mpi_errors_return; extern struct ompi_predefined_win_t ompi_mpi_win_null; extern struct ompi_predefined_file_t ompi_mpi_file_null; extern struct ompi_predefined_info_t ompi_mpi_info_null; extern int *MPI_F_STATUS_IGNORE; extern int *MPI_F_STATUSES_IGNORE; #line 921 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 954 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 1011 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 1038 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" int MPI_Abort(MPI_Comm comm, int errorcode); int MPI_Accumulate(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Op op, MPI_Win win); int MPI_Add_error_class(int *errorclass); int MPI_Add_error_code(int errorclass, int *errorcode); int MPI_Add_error_string(int errorcode, char *string); int MPI_Address(void *location, MPI_Aint *address) ; int MPI_Allgather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm); int MPI_Iallgather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int MPI_Allgatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, MPI_Comm comm); int MPI_Iallgatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int MPI_Alloc_mem(MPI_Aint size, MPI_Info info, void *baseptr); int MPI_Allreduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int MPI_Iallreduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int MPI_Alltoall(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm); int MPI_Ialltoall(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int MPI_Alltoallv(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype recvtype, MPI_Comm comm); int MPI_Ialltoallv(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int MPI_Alltoallw(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype *sendtypes, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype *recvtypes, MPI_Comm comm); int MPI_Ialltoallw(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype *sendtypes, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype *recvtypes, MPI_Comm comm, MPI_Request *request); int MPI_Attr_delete(MPI_Comm comm, int keyval) ; int MPI_Attr_get(MPI_Comm comm, int keyval, void *attribute_val, int *flag) ; int MPI_Attr_put(MPI_Comm comm, int keyval, void *attribute_val) ; int MPI_Barrier(MPI_Comm comm); int MPI_Ibarrier(MPI_Comm comm, MPI_Request *request); int MPI_Bcast(void *buffer, int count, MPI_Datatype datatype, int root, MPI_Comm comm); int MPI_Bsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int MPI_Ibcast(void *buffer, int count, MPI_Datatype datatype, int root, MPI_Comm comm, MPI_Request *request); int MPI_Bsend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Buffer_attach(void *buffer, int size); int MPI_Buffer_detach(void *buffer, int *size); int MPI_Cancel(MPI_Request *request); int MPI_Cart_coords(MPI_Comm comm, int rank, int maxdims, int *coords); int MPI_Cart_create(MPI_Comm old_comm, int ndims, int *dims, int *periods, int reorder, MPI_Comm *comm_cart); int MPI_Cart_get(MPI_Comm comm, int maxdims, int *dims, int *periods, int *coords); int MPI_Cart_map(MPI_Comm comm, int ndims, int *dims, int *periods, int *newrank); int MPI_Cart_rank(MPI_Comm comm, int *coords, int *rank); int MPI_Cart_shift(MPI_Comm comm, int direction, int disp, int *rank_source, int *rank_dest); int MPI_Cart_sub(MPI_Comm comm, int *remain_dims, MPI_Comm *new_comm); int MPI_Cartdim_get(MPI_Comm comm, int *ndims); int MPI_Close_port(char *port_name); int MPI_Comm_accept(char *port_name, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *newcomm); int MPI_Comm_c2f(MPI_Comm comm); int MPI_Comm_call_errhandler(MPI_Comm comm, int errorcode); int MPI_Comm_compare(MPI_Comm comm1, MPI_Comm comm2, int *result); int MPI_Comm_connect(char *port_name, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *newcomm); int MPI_Comm_create_errhandler(MPI_Comm_errhandler_function *function, MPI_Errhandler *errhandler); int MPI_Comm_create_keyval(MPI_Comm_copy_attr_function *comm_copy_attr_fn, MPI_Comm_delete_attr_function *comm_delete_attr_fn, int *comm_keyval, void *extra_state); int MPI_Comm_create(MPI_Comm comm, MPI_Group group, MPI_Comm *newcomm); int MPI_Comm_delete_attr(MPI_Comm comm, int comm_keyval); int MPI_Comm_disconnect(MPI_Comm *comm); int MPI_Comm_dup(MPI_Comm comm, MPI_Comm *newcomm); MPI_Comm MPI_Comm_f2c(int comm); int MPI_Comm_free_keyval(int *comm_keyval); int MPI_Comm_free(MPI_Comm *comm); int MPI_Comm_get_attr(MPI_Comm comm, int comm_keyval, void *attribute_val, int *flag); int MPI_Dist_graph_create(MPI_Comm comm_old, int n, int nodes[], int degrees[], int targets[], int weights[], MPI_Info info, int reorder, MPI_Comm * newcomm); int MPI_Dist_graph_create_adjacent(MPI_Comm comm_old, int indegree, int sources[], int sourceweights[], int outdegree, int destinations[], int destweights[], MPI_Info info, int reorder, MPI_Comm *comm_dist_graph); int MPI_Dist_graph_neighbors(MPI_Comm comm, int maxindegree, int sources[], int sourceweights[], int maxoutdegree, int destinations[], int destweights[]); int MPI_Dist_graph_neighbors_count(MPI_Comm comm, int *inneighbors, int *outneighbors, int *weighted); int MPI_Comm_get_errhandler(MPI_Comm comm, MPI_Errhandler *erhandler); int MPI_Comm_get_name(MPI_Comm comm, char *comm_name, int *resultlen); int MPI_Comm_get_parent(MPI_Comm *parent); int MPI_Comm_group(MPI_Comm comm, MPI_Group *group); int MPI_Comm_join(int fd, MPI_Comm *intercomm); int MPI_Comm_rank(MPI_Comm comm, int *rank); int MPI_Comm_remote_group(MPI_Comm comm, MPI_Group *group); int MPI_Comm_remote_size(MPI_Comm comm, int *size); int MPI_Comm_set_attr(MPI_Comm comm, int comm_keyval, void *attribute_val); int MPI_Comm_set_errhandler(MPI_Comm comm, MPI_Errhandler errhandler); int MPI_Comm_set_name(MPI_Comm comm, char *comm_name); int MPI_Comm_size(MPI_Comm comm, int *size); int MPI_Comm_spawn(char *command, char **argv, int maxprocs, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *intercomm, int *array_of_errcodes); int MPI_Comm_spawn_multiple(int count, char **array_of_commands, char ***array_of_argv, int *array_of_maxprocs, MPI_Info *array_of_info, int root, MPI_Comm comm, MPI_Comm *intercomm, int *array_of_errcodes); int MPI_Comm_split(MPI_Comm comm, int color, int key, MPI_Comm *newcomm); int MPI_Comm_test_inter(MPI_Comm comm, int *flag); int MPI_Dims_create(int nnodes, int ndims, int *dims); int MPI_Errhandler_c2f(MPI_Errhandler errhandler); int MPI_Errhandler_create(MPI_Handler_function *function, MPI_Errhandler *errhandler) ; MPI_Errhandler MPI_Errhandler_f2c(int errhandler); int MPI_Errhandler_free(MPI_Errhandler *errhandler); int MPI_Errhandler_get(MPI_Comm comm, MPI_Errhandler *errhandler) ; int MPI_Errhandler_set(MPI_Comm comm, MPI_Errhandler errhandler) ; int MPI_Error_class(int errorcode, int *errorclass); int MPI_Error_string(int errorcode, char *string, int *resultlen); int MPI_Exscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int MPI_Iexscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int MPI_File_c2f(MPI_File file); MPI_File MPI_File_f2c(int file); int MPI_File_call_errhandler(MPI_File fh, int errorcode); int MPI_File_create_errhandler(MPI_File_errhandler_function *function, MPI_Errhandler *errhandler); int MPI_File_set_errhandler( MPI_File file, MPI_Errhandler errhandler); int MPI_File_get_errhandler( MPI_File file, MPI_Errhandler *errhandler); int MPI_File_open(MPI_Comm comm, char *filename, int amode, MPI_Info info, MPI_File *fh); int MPI_File_close(MPI_File *fh); int MPI_File_delete(char *filename, MPI_Info info); int MPI_File_set_size(MPI_File fh, MPI_Offset size); int MPI_File_preallocate(MPI_File fh, MPI_Offset size); int MPI_File_get_size(MPI_File fh, MPI_Offset *size); int MPI_File_get_group(MPI_File fh, MPI_Group *group); int MPI_File_get_amode(MPI_File fh, int *amode); int MPI_File_set_info(MPI_File fh, MPI_Info info); int MPI_File_get_info(MPI_File fh, MPI_Info *info_used); int MPI_File_set_view(MPI_File fh, MPI_Offset disp, MPI_Datatype etype, MPI_Datatype filetype, char *datarep, MPI_Info info); int MPI_File_get_view(MPI_File fh, MPI_Offset *disp, MPI_Datatype *etype, MPI_Datatype *filetype, char *datarep); int MPI_File_read_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_read_at_all(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write_at_all(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_iread_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_iwrite_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_read(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_read_all(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write_all(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_iread(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_iwrite(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_seek(MPI_File fh, MPI_Offset offset, int whence); int MPI_File_get_position(MPI_File fh, MPI_Offset *offset); int MPI_File_get_byte_offset(MPI_File fh, MPI_Offset offset, MPI_Offset *disp); int MPI_File_read_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_iread_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_iwrite_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_read_ordered(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write_ordered(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_seek_shared(MPI_File fh, MPI_Offset offset, int whence); int MPI_File_get_position_shared(MPI_File fh, MPI_Offset *offset); int MPI_File_read_at_all_begin(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype); int MPI_File_read_at_all_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_write_at_all_begin(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype); int MPI_File_write_at_all_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_read_all_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int MPI_File_read_all_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_write_all_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int MPI_File_write_all_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_read_ordered_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int MPI_File_read_ordered_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_write_ordered_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int MPI_File_write_ordered_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_get_type_extent(MPI_File fh, MPI_Datatype datatype, MPI_Aint *extent); int MPI_File_set_atomicity(MPI_File fh, int flag); int MPI_File_get_atomicity(MPI_File fh, int *flag); int MPI_File_sync(MPI_File fh); int MPI_Finalize(void); int MPI_Finalized(int *flag); int MPI_Free_mem(void *base); int MPI_Gather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int MPI_Igather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int MPI_Gatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, int root, MPI_Comm comm); int MPI_Igatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int MPI_Get_address(void *location, MPI_Aint *address); int MPI_Get_count(MPI_Status *status, MPI_Datatype datatype, int *count); int MPI_Get_elements(MPI_Status *status, MPI_Datatype datatype, int *count); int MPI_Get(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Win win); int MPI_Get_processor_name(char *name, int *resultlen); int MPI_Get_version(int *version, int *subversion); int MPI_Graph_create(MPI_Comm comm_old, int nnodes, int *index, int *edges, int reorder, MPI_Comm *comm_graph); int MPI_Graph_get(MPI_Comm comm, int maxindex, int maxedges, int *index, int *edges); int MPI_Graph_map(MPI_Comm comm, int nnodes, int *index, int *edges, int *newrank); int MPI_Graph_neighbors_count(MPI_Comm comm, int rank, int *nneighbors); int MPI_Graph_neighbors(MPI_Comm comm, int rank, int maxneighbors, int *neighbors); int MPI_Graphdims_get(MPI_Comm comm, int *nnodes, int *nedges); int MPI_Grequest_complete(MPI_Request request); int MPI_Grequest_start(MPI_Grequest_query_function *query_fn, MPI_Grequest_free_function *free_fn, MPI_Grequest_cancel_function *cancel_fn, void *extra_state, MPI_Request *request); int MPI_Group_c2f(MPI_Group group); int MPI_Group_compare(MPI_Group group1, MPI_Group group2, int *result); int MPI_Group_difference(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int MPI_Group_excl(MPI_Group group, int n, int *ranks, MPI_Group *newgroup); MPI_Group MPI_Group_f2c(int group); int MPI_Group_free(MPI_Group *group); int MPI_Group_incl(MPI_Group group, int n, int *ranks, MPI_Group *newgroup); int MPI_Group_intersection(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int MPI_Group_range_excl(MPI_Group group, int n, int ranges[][3], MPI_Group *newgroup); int MPI_Group_range_incl(MPI_Group group, int n, int ranges[][3], MPI_Group *newgroup); int MPI_Group_rank(MPI_Group group, int *rank); int MPI_Group_size(MPI_Group group, int *size); int MPI_Group_translate_ranks(MPI_Group group1, int n, int *ranks1, MPI_Group group2, int *ranks2); int MPI_Group_union(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int MPI_Ibsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Improbe(int source, int tag, MPI_Comm comm, int *flag, MPI_Message *message, MPI_Status *status); int MPI_Imrecv(void *buf, int count, MPI_Datatype type, MPI_Message *message, MPI_Request *request); int MPI_Info_c2f(MPI_Info info); int MPI_Info_create(MPI_Info *info); int MPI_Info_delete(MPI_Info info, char *key); int MPI_Info_dup(MPI_Info info, MPI_Info *newinfo); MPI_Info MPI_Info_f2c(int info); int MPI_Info_free(MPI_Info *info); int MPI_Info_get(MPI_Info info, char *key, int valuelen, char *value, int *flag); int MPI_Info_get_nkeys(MPI_Info info, int *nkeys); int MPI_Info_get_nthkey(MPI_Info info, int n, char *key); int MPI_Info_get_valuelen(MPI_Info info, char *key, int *valuelen, int *flag); int MPI_Info_set(MPI_Info info, char *key, char *value); int MPI_Init(int *argc, char ***argv); int MPI_Initialized(int *flag); int MPI_Init_thread(int *argc, char ***argv, int required, int *provided); int MPI_Intercomm_create(MPI_Comm local_comm, int local_leader, MPI_Comm bridge_comm, int remote_leader, int tag, MPI_Comm *newintercomm); int MPI_Intercomm_merge(MPI_Comm intercomm, int high, MPI_Comm *newintercomm); int MPI_Iprobe(int source, int tag, MPI_Comm comm, int *flag, MPI_Status *status); int MPI_Irecv(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Irsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Isend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Issend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Is_thread_main(int *flag); int MPI_Keyval_create(MPI_Copy_function *copy_fn, MPI_Delete_function *delete_fn, int *keyval, void *extra_state) ; int MPI_Keyval_free(int *keyval) ; int MPI_Lookup_name(char *service_name, MPI_Info info, char *port_name); int MPI_Message_c2f(MPI_Message message); MPI_Message MPI_Message_f2c(int message); int MPI_Mprobe(int source, int tag, MPI_Comm comm, MPI_Message *message, MPI_Status *status); int MPI_Mrecv(void *buf, int count, MPI_Datatype type, MPI_Message *message, MPI_Status *status); int MPI_Op_c2f(MPI_Op op); int MPI_Op_commutative(MPI_Op op, int *commute); int MPI_Op_create(MPI_User_function *function, int commute, MPI_Op *op); int MPI_Open_port(MPI_Info info, char *port_name); MPI_Op MPI_Op_f2c(int op); int MPI_Op_free(MPI_Op *op); int MPI_Pack_external(char *datarep, void *inbuf, int incount, MPI_Datatype datatype, void *outbuf, MPI_Aint outsize, MPI_Aint *position); int MPI_Pack_external_size(char *datarep, int incount, MPI_Datatype datatype, MPI_Aint *size); int MPI_Pack(void *inbuf, int incount, MPI_Datatype datatype, void *outbuf, int outsize, int *position, MPI_Comm comm); int MPI_Pack_size(int incount, MPI_Datatype datatype, MPI_Comm comm, int *size); int MPI_Pcontrol(const int level, ...); int MPI_Probe(int source, int tag, MPI_Comm comm, MPI_Status *status); int MPI_Publish_name(char *service_name, MPI_Info info, char *port_name); int MPI_Put(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Win win); int MPI_Query_thread(int *provided); int MPI_Recv_init(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Recv(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Status *status); int MPI_Reduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, int root, MPI_Comm comm); int MPI_Ireduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, int root, MPI_Comm comm, MPI_Request *request); int MPI_Reduce_local(void *inbuf, void *inoutbuf, int count, MPI_Datatype datatype, MPI_Op op); int MPI_Reduce_scatter(void *sendbuf, void *recvbuf, int *recvcounts, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int MPI_Ireduce_scatter(void *sendbuf, void *recvbuf, int *recvcounts, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int MPI_Reduce_scatter_block(void *sendbuf, void *recvbuf, int recvcount, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int MPI_Ireduce_scatter_block(void *sendbuf, void *recvbuf, int recvcount, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int MPI_Register_datarep(char *datarep, MPI_Datarep_conversion_function *read_conversion_fn, MPI_Datarep_conversion_function *write_conversion_fn, MPI_Datarep_extent_function *dtype_file_extent_fn, void *extra_state); int MPI_Request_c2f(MPI_Request request); MPI_Request MPI_Request_f2c(int request); int MPI_Request_free(MPI_Request *request); int MPI_Request_get_status(MPI_Request request, int *flag, MPI_Status *status); int MPI_Rsend(void *ibuf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int MPI_Rsend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Scan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int MPI_Iscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int MPI_Scatter(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int MPI_Iscatter(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int MPI_Scatterv(void *sendbuf, int *sendcounts, int *displs, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int MPI_Iscatterv(void *sendbuf, int *sendcounts, int *displs, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int MPI_Send_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Send(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int MPI_Sendrecv(void *sendbuf, int sendcount, MPI_Datatype sendtype, int dest, int sendtag, void *recvbuf, int recvcount, MPI_Datatype recvtype, int source, int recvtag, MPI_Comm comm, MPI_Status *status); int MPI_Sendrecv_replace(void * buf, int count, MPI_Datatype datatype, int dest, int sendtag, int source, int recvtag, MPI_Comm comm, MPI_Status *status); int MPI_Ssend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Ssend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int MPI_Start(MPI_Request *request); int MPI_Startall(int count, MPI_Request *array_of_requests); int MPI_Status_c2f(MPI_Status *c_status, int *f_status); int MPI_Status_f2c(int *f_status, MPI_Status *c_status); int MPI_Status_set_cancelled(MPI_Status *status, int flag); int MPI_Status_set_elements(MPI_Status *status, MPI_Datatype datatype, int count); int MPI_Testall(int count, MPI_Request array_of_requests[], int *flag, MPI_Status array_of_statuses[]); int MPI_Testany(int count, MPI_Request array_of_requests[], int *index, int *flag, MPI_Status *status); int MPI_Test(MPI_Request *request, int *flag, MPI_Status *status); int MPI_Test_cancelled(MPI_Status *status, int *flag); int MPI_Testsome(int incount, MPI_Request array_of_requests[], int *outcount, int array_of_indices[], MPI_Status array_of_statuses[]); int MPI_Topo_test(MPI_Comm comm, int *status); int MPI_Type_c2f(MPI_Datatype datatype); int MPI_Type_commit(MPI_Datatype *type); int MPI_Type_contiguous(int count, MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_darray(int size, int rank, int ndims, int gsize_array[], int distrib_array[], int darg_array[], int psize_array[], int order, MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_f90_complex(int p, int r, MPI_Datatype *newtype); int MPI_Type_create_f90_integer(int r, MPI_Datatype *newtype); int MPI_Type_create_f90_real(int p, int r, MPI_Datatype *newtype); int MPI_Type_create_hindexed(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_hvector(int count, int blocklength, MPI_Aint stride, MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_keyval(MPI_Type_copy_attr_function *type_copy_attr_fn, MPI_Type_delete_attr_function *type_delete_attr_fn, int *type_keyval, void *extra_state); int MPI_Type_create_indexed_block(int count, int blocklength, int array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_struct(int count, int array_of_block_lengths[], MPI_Aint array_of_displacements[], MPI_Datatype array_of_types[], MPI_Datatype *newtype); int MPI_Type_create_subarray(int ndims, int size_array[], int subsize_array[], int start_array[], int order, MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_resized(MPI_Datatype oldtype, MPI_Aint lb, MPI_Aint extent, MPI_Datatype *newtype); int MPI_Type_delete_attr(MPI_Datatype type, int type_keyval); int MPI_Type_dup(MPI_Datatype type, MPI_Datatype *newtype); int MPI_Type_extent(MPI_Datatype type, MPI_Aint *extent) ; int MPI_Type_free(MPI_Datatype *type); int MPI_Type_free_keyval(int *type_keyval); MPI_Datatype MPI_Type_f2c(int datatype); int MPI_Type_get_attr(MPI_Datatype type, int type_keyval, void *attribute_val, int *flag); int MPI_Type_get_contents(MPI_Datatype mtype, int max_integers, int max_addresses, int max_datatypes, int array_of_integers[], MPI_Aint array_of_addresses[], MPI_Datatype array_of_datatypes[]); int MPI_Type_get_envelope(MPI_Datatype type, int *num_integers, int *num_addresses, int *num_datatypes, int *combiner); int MPI_Type_get_extent(MPI_Datatype type, MPI_Aint *lb, MPI_Aint *extent); int MPI_Type_get_name(MPI_Datatype type, char *type_name, int *resultlen); int MPI_Type_get_true_extent(MPI_Datatype datatype, MPI_Aint *true_lb, MPI_Aint *true_extent); int MPI_Type_hindexed(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype) ; int MPI_Type_hvector(int count, int blocklength, MPI_Aint stride, MPI_Datatype oldtype, MPI_Datatype *newtype) ; int MPI_Type_indexed(int count, int array_of_blocklengths[], int array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_lb(MPI_Datatype type, MPI_Aint *lb) ; int MPI_Type_match_size(int typeclass, int size, MPI_Datatype *type); int MPI_Type_set_attr(MPI_Datatype type, int type_keyval, void *attr_val); int MPI_Type_set_name(MPI_Datatype type, char *type_name); int MPI_Type_size(MPI_Datatype type, int *size); int MPI_Type_struct(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype array_of_types[], MPI_Datatype *newtype) ; int MPI_Type_ub(MPI_Datatype mtype, MPI_Aint *ub) ; int MPI_Type_vector(int count, int blocklength, int stride, MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Unpack(void *inbuf, int insize, int *position, void *outbuf, int outcount, MPI_Datatype datatype, MPI_Comm comm); int MPI_Unpublish_name(char *service_name, MPI_Info info, char *port_name); int MPI_Unpack_external (char *datarep, void *inbuf, MPI_Aint insize, MPI_Aint *position, void *outbuf, int outcount, MPI_Datatype datatype); int MPI_Waitall(int count, MPI_Request *array_of_requests, MPI_Status *array_of_statuses); int MPI_Waitany(int count, MPI_Request *array_of_requests, int *index, MPI_Status *status); int MPI_Wait(MPI_Request *request, MPI_Status *status); int MPI_Waitsome(int incount, MPI_Request *array_of_requests, int *outcount, int *array_of_indices, MPI_Status *array_of_statuses); int MPI_Win_c2f(MPI_Win win); int MPI_Win_call_errhandler(MPI_Win win, int errorcode); int MPI_Win_complete(MPI_Win win); int MPI_Win_create(void *base, MPI_Aint size, int disp_unit, MPI_Info info, MPI_Comm comm, MPI_Win *win); int MPI_Win_create_errhandler(MPI_Win_errhandler_function *function, MPI_Errhandler *errhandler); int MPI_Win_create_keyval(MPI_Win_copy_attr_function *win_copy_attr_fn, MPI_Win_delete_attr_function *win_delete_attr_fn, int *win_keyval, void *extra_state); int MPI_Win_delete_attr(MPI_Win win, int win_keyval); MPI_Win MPI_Win_f2c(int win); int MPI_Win_fence(int assert, MPI_Win win); int MPI_Win_free(MPI_Win *win); int MPI_Win_free_keyval(int *win_keyval); int MPI_Win_get_attr(MPI_Win win, int win_keyval, void *attribute_val, int *flag); int MPI_Win_get_errhandler(MPI_Win win, MPI_Errhandler *errhandler); int MPI_Win_get_group(MPI_Win win, MPI_Group *group); int MPI_Win_get_name(MPI_Win win, char *win_name, int *resultlen); int MPI_Win_lock(int lock_type, int rank, int assert, MPI_Win win); int MPI_Win_post(MPI_Group group, int assert, MPI_Win win); int MPI_Win_set_attr(MPI_Win win, int win_keyval, void *attribute_val); int MPI_Win_set_errhandler(MPI_Win win, MPI_Errhandler errhandler); int MPI_Win_set_name(MPI_Win win, char *win_name); int MPI_Win_start(MPI_Group group, int assert, MPI_Win win); int MPI_Win_test(MPI_Win win, int *flag); int MPI_Win_unlock(int rank, MPI_Win win); int MPI_Win_wait(MPI_Win win); double MPI_Wtick(void); double MPI_Wtime(void); int PMPI_Abort(MPI_Comm comm, int errorcode); int PMPI_Accumulate(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Op op, MPI_Win win); int PMPI_Add_error_class(int *errorclass); int PMPI_Add_error_code(int errorclass, int *errorcode); int PMPI_Add_error_string(int errorcode, char *string); int PMPI_Address(void *location, MPI_Aint *address) ; int PMPI_Allgather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm); int PMPI_Iallgather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int PMPI_Allgatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, MPI_Comm comm); int PMPI_Iallgatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int PMPI_Alloc_mem(MPI_Aint size, MPI_Info info, void *baseptr); int PMPI_Allreduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int PMPI_Iallreduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int PMPI_Alltoall(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm); int PMPI_Ialltoall(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int PMPI_Alltoallv(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype recvtype, MPI_Comm comm); int PMPI_Ialltoallv(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int PMPI_Alltoallw(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype *sendtypes, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype *recvtypes, MPI_Comm comm); int PMPI_Ialltoallw(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype *sendtypes, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype *recvtypes, MPI_Comm comm, MPI_Request *request); int PMPI_Attr_delete(MPI_Comm comm, int keyval) ; int PMPI_Attr_get(MPI_Comm comm, int keyval, void *attribute_val, int *flag) ; int PMPI_Dist_graph_create(MPI_Comm comm_old, int n, int nodes[], int degrees[], int targets[], int weights[], MPI_Info info, int reorder, MPI_Comm * newcomm); int PMPI_Dist_graph_create_adjacent(MPI_Comm comm_old, int indegree, int sources[], int sourceweights[], int outdegree, int destinations[], int destweights[], MPI_Info info, int reorder, MPI_Comm *comm_dist_graph); int PMPI_Dist_graph_neighbors(MPI_Comm comm, int maxindegree, int sources[], int sourceweights[], int maxoutdegree, int destinations[], int destweights[]); int PMPI_Dist_graph_neighbors_count(MPI_Comm comm, int *inneighbors, int *outneighbors, int *weighted); int PMPI_Attr_put(MPI_Comm comm, int keyval, void *attribute_val) ; int PMPI_Barrier(MPI_Comm comm); int PMPI_Ibarrier(MPI_Comm comm, MPI_Request *request); int PMPI_Bcast(void *buffer, int count, MPI_Datatype datatype, int root, MPI_Comm comm); int PMPI_Ibcast(void *buffer, int count, MPI_Datatype datatype, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Bsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int PMPI_Bsend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Buffer_attach(void *buffer, int size); int PMPI_Buffer_detach(void *buffer, int *size); int PMPI_Cancel(MPI_Request *request); int PMPI_Cart_coords(MPI_Comm comm, int rank, int maxdims, int *coords); int PMPI_Cart_create(MPI_Comm old_comm, int ndims, int *dims, int *periods, int reorder, MPI_Comm *comm_cart); int PMPI_Cart_get(MPI_Comm comm, int maxdims, int *dims, int *periods, int *coords); int PMPI_Cart_map(MPI_Comm comm, int ndims, int *dims, int *periods, int *newrank); int PMPI_Cart_rank(MPI_Comm comm, int *coords, int *rank); int PMPI_Cart_shift(MPI_Comm comm, int direction, int disp, int *rank_source, int *rank_dest); int PMPI_Cart_sub(MPI_Comm comm, int *remain_dims, MPI_Comm *new_comm); int PMPI_Cartdim_get(MPI_Comm comm, int *ndims); int PMPI_Close_port(char *port_name); int PMPI_Comm_accept(char *port_name, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *newcomm); int PMPI_Comm_c2f(MPI_Comm comm); int PMPI_Comm_call_errhandler(MPI_Comm comm, int errorcode); int PMPI_Comm_compare(MPI_Comm comm1, MPI_Comm comm2, int *result); int PMPI_Comm_connect(char *port_name, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *newcomm); int PMPI_Comm_create_errhandler(MPI_Comm_errhandler_function *function, MPI_Errhandler *errhandler); int PMPI_Comm_create_keyval(MPI_Comm_copy_attr_function *comm_copy_attr_fn, MPI_Comm_delete_attr_function *comm_delete_attr_fn, int *comm_keyval, void *extra_state); int PMPI_Comm_create(MPI_Comm comm, MPI_Group group, MPI_Comm *newcomm); int PMPI_Comm_delete_attr(MPI_Comm comm, int comm_keyval); int PMPI_Comm_disconnect(MPI_Comm *comm); int PMPI_Comm_dup(MPI_Comm comm, MPI_Comm *newcomm); MPI_Comm PMPI_Comm_f2c(int comm); int PMPI_Comm_free_keyval(int *comm_keyval); int PMPI_Comm_free(MPI_Comm *comm); int PMPI_Comm_get_attr(MPI_Comm comm, int comm_keyval, void *attribute_val, int *flag); int PMPI_Comm_get_errhandler(MPI_Comm comm, MPI_Errhandler *erhandler); int PMPI_Comm_get_name(MPI_Comm comm, char *comm_name, int *resultlen); int PMPI_Comm_get_parent(MPI_Comm *parent); int PMPI_Comm_group(MPI_Comm comm, MPI_Group *group); int PMPI_Comm_join(int fd, MPI_Comm *intercomm); int PMPI_Comm_rank(MPI_Comm comm, int *rank); int PMPI_Comm_remote_group(MPI_Comm comm, MPI_Group *group); int PMPI_Comm_remote_size(MPI_Comm comm, int *size); int PMPI_Comm_set_attr(MPI_Comm comm, int comm_keyval, void *attribute_val); int PMPI_Comm_set_errhandler(MPI_Comm comm, MPI_Errhandler errhandler); int PMPI_Comm_set_name(MPI_Comm comm, char *comm_name); int PMPI_Comm_size(MPI_Comm comm, int *size); int PMPI_Comm_spawn(char *command, char **argv, int maxprocs, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *intercomm, int *array_of_errcodes); int PMPI_Comm_spawn_multiple(int count, char **array_of_commands, char ***array_of_argv, int *array_of_maxprocs, MPI_Info *array_of_info, int root, MPI_Comm comm, MPI_Comm *intercomm, int *array_of_errcodes); int PMPI_Comm_split(MPI_Comm comm, int color, int key, MPI_Comm *newcomm); int PMPI_Comm_test_inter(MPI_Comm comm, int *flag); int PMPI_Dims_create(int nnodes, int ndims, int *dims); int PMPI_Errhandler_c2f(MPI_Errhandler errhandler); int PMPI_Errhandler_create(MPI_Handler_function *function, MPI_Errhandler *errhandler) ; MPI_Errhandler PMPI_Errhandler_f2c(int errhandler); int PMPI_Errhandler_free(MPI_Errhandler *errhandler); int PMPI_Errhandler_get(MPI_Comm comm, MPI_Errhandler *errhandler) ; int PMPI_Errhandler_set(MPI_Comm comm, MPI_Errhandler errhandler) ; int PMPI_Error_class(int errorcode, int *errorclass); int PMPI_Error_string(int errorcode, char *string, int *resultlen); int PMPI_Exscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int PMPI_Iexscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int PMPI_File_c2f(MPI_File file); MPI_File PMPI_File_f2c(int file); int PMPI_File_call_errhandler(MPI_File fh, int errorcode); int PMPI_File_create_errhandler(MPI_File_errhandler_function *function, MPI_Errhandler *errhandler); int PMPI_File_set_errhandler( MPI_File file, MPI_Errhandler errhandler); int PMPI_File_get_errhandler( MPI_File file, MPI_Errhandler *errhandler); int PMPI_File_open(MPI_Comm comm, char *filename, int amode, MPI_Info info, MPI_File *fh); int PMPI_File_close(MPI_File *fh); int PMPI_File_delete(char *filename, MPI_Info info); int PMPI_File_set_size(MPI_File fh, MPI_Offset size); int PMPI_File_preallocate(MPI_File fh, MPI_Offset size); int PMPI_File_get_size(MPI_File fh, MPI_Offset *size); int PMPI_File_get_group(MPI_File fh, MPI_Group *group); int PMPI_File_get_amode(MPI_File fh, int *amode); int PMPI_File_set_info(MPI_File fh, MPI_Info info); int PMPI_File_get_info(MPI_File fh, MPI_Info *info_used); int PMPI_File_set_view(MPI_File fh, MPI_Offset disp, MPI_Datatype etype, MPI_Datatype filetype, char *datarep, MPI_Info info); int PMPI_File_get_view(MPI_File fh, MPI_Offset *disp, MPI_Datatype *etype, MPI_Datatype *filetype, char *datarep); int PMPI_File_read_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_read_at_all(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write_at_all(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_iread_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_iwrite_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_read(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_read_all(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write_all(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_iread(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_iwrite(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_seek(MPI_File fh, MPI_Offset offset, int whence); int PMPI_File_get_position(MPI_File fh, MPI_Offset *offset); int PMPI_File_get_byte_offset(MPI_File fh, MPI_Offset offset, MPI_Offset *disp); int PMPI_File_read_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_iread_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_iwrite_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_read_ordered(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write_ordered(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_seek_shared(MPI_File fh, MPI_Offset offset, int whence); int PMPI_File_get_position_shared(MPI_File fh, MPI_Offset *offset); int PMPI_File_read_at_all_begin(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype); int PMPI_File_read_at_all_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_write_at_all_begin(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype); int PMPI_File_write_at_all_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_read_all_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int PMPI_File_read_all_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_write_all_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int PMPI_File_write_all_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_read_ordered_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int PMPI_File_read_ordered_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_write_ordered_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int PMPI_File_write_ordered_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_get_type_extent(MPI_File fh, MPI_Datatype datatype, MPI_Aint *extent); int PMPI_File_set_atomicity(MPI_File fh, int flag); int PMPI_File_get_atomicity(MPI_File fh, int *flag); int PMPI_File_sync(MPI_File fh); int PMPI_Finalize(void); int PMPI_Finalized(int *flag); int PMPI_Free_mem(void *base); int PMPI_Gather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int PMPI_Igather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Gatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, int root, MPI_Comm comm); int PMPI_Igatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Get_address(void *location, MPI_Aint *address); int PMPI_Get_count(MPI_Status *status, MPI_Datatype datatype, int *count); int PMPI_Get_elements(MPI_Status *status, MPI_Datatype datatype, int *count); int PMPI_Get(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Win win); int PMPI_Get_processor_name(char *name, int *resultlen); int PMPI_Get_version(int *version, int *subversion); int PMPI_Graph_create(MPI_Comm comm_old, int nnodes, int *index, int *edges, int reorder, MPI_Comm *comm_graph); int PMPI_Graph_get(MPI_Comm comm, int maxindex, int maxedges, int *index, int *edges); int PMPI_Graph_map(MPI_Comm comm, int nnodes, int *index, int *edges, int *newrank); int PMPI_Graph_neighbors_count(MPI_Comm comm, int rank, int *nneighbors); int PMPI_Graph_neighbors(MPI_Comm comm, int rank, int maxneighbors, int *neighbors); int PMPI_Graphdims_get(MPI_Comm comm, int *nnodes, int *nedges); int PMPI_Grequest_complete(MPI_Request request); int PMPI_Grequest_start(MPI_Grequest_query_function *query_fn, MPI_Grequest_free_function *free_fn, MPI_Grequest_cancel_function *cancel_fn, void *extra_state, MPI_Request *request); int PMPI_Group_c2f(MPI_Group group); int PMPI_Group_compare(MPI_Group group1, MPI_Group group2, int *result); int PMPI_Group_difference(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int PMPI_Group_excl(MPI_Group group, int n, int *ranks, MPI_Group *newgroup); MPI_Group PMPI_Group_f2c(int group); int PMPI_Group_free(MPI_Group *group); int PMPI_Group_incl(MPI_Group group, int n, int *ranks, MPI_Group *newgroup); int PMPI_Group_intersection(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int PMPI_Group_range_excl(MPI_Group group, int n, int ranges[][3], MPI_Group *newgroup); int PMPI_Group_range_incl(MPI_Group group, int n, int ranges[][3], MPI_Group *newgroup); int PMPI_Group_rank(MPI_Group group, int *rank); int PMPI_Group_size(MPI_Group group, int *size); int PMPI_Group_translate_ranks(MPI_Group group1, int n, int *ranks1, MPI_Group group2, int *ranks2); int PMPI_Group_union(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int PMPI_Ibsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Improbe(int source, int tag, MPI_Comm comm, int *flag, MPI_Message *message, MPI_Status *status); int PMPI_Imrecv(void *buf, int count, MPI_Datatype type, MPI_Message *message, MPI_Request *request); int PMPI_Info_c2f(MPI_Info info); int PMPI_Info_create(MPI_Info *info); int PMPI_Info_delete(MPI_Info info, char *key); int PMPI_Info_dup(MPI_Info info, MPI_Info *newinfo); MPI_Info PMPI_Info_f2c(int info); int PMPI_Info_free(MPI_Info *info); int PMPI_Info_get(MPI_Info info, char *key, int valuelen, char *value, int *flag); int PMPI_Info_get_nkeys(MPI_Info info, int *nkeys); int PMPI_Info_get_nthkey(MPI_Info info, int n, char *key); int PMPI_Info_get_valuelen(MPI_Info info, char *key, int *valuelen, int *flag); int PMPI_Info_set(MPI_Info info, char *key, char *value); int PMPI_Init(int *argc, char ***argv); int PMPI_Initialized(int *flag); int PMPI_Init_thread(int *argc, char ***argv, int required, int *provided); int PMPI_Intercomm_create(MPI_Comm local_comm, int local_leader, MPI_Comm bridge_comm, int remote_leader, int tag, MPI_Comm *newintercomm); int PMPI_Intercomm_merge(MPI_Comm intercomm, int high, MPI_Comm *newintercomm); int PMPI_Iprobe(int source, int tag, MPI_Comm comm, int *flag, MPI_Status *status); int PMPI_Irecv(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Irsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Isend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Issend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Is_thread_main(int *flag); int PMPI_Keyval_create(MPI_Copy_function *copy_fn, MPI_Delete_function *delete_fn, int *keyval, void *extra_state) ; int PMPI_Keyval_free(int *keyval) ; int PMPI_Lookup_name(char *service_name, MPI_Info info, char *port_name); int PMPI_Message_c2f(MPI_Message message); MPI_Message PMPI_Message_f2c(int message); int PMPI_Mprobe(int source, int tag, MPI_Comm comm, MPI_Message *message, MPI_Status *status); int PMPI_Mrecv(void *buf, int count, MPI_Datatype type, MPI_Message *message, MPI_Status *status); int PMPI_Op_c2f(MPI_Op op); int PMPI_Op_commutative(MPI_Op op, int *commute); int PMPI_Op_create(MPI_User_function *function, int commute, MPI_Op *op); int PMPI_Open_port(MPI_Info info, char *port_name); MPI_Op PMPI_Op_f2c(int op); int PMPI_Op_free(MPI_Op *op); int PMPI_Pack_external(char *datarep, void *inbuf, int incount, MPI_Datatype datatype, void *outbuf, MPI_Aint outsize, MPI_Aint *position); int PMPI_Pack_external_size(char *datarep, int incount, MPI_Datatype datatype, MPI_Aint *size); int PMPI_Pack(void *inbuf, int incount, MPI_Datatype datatype, void *outbuf, int outsize, int *position, MPI_Comm comm); int PMPI_Pack_size(int incount, MPI_Datatype datatype, MPI_Comm comm, int *size); int PMPI_Pcontrol(const int level, ...); int PMPI_Probe(int source, int tag, MPI_Comm comm, MPI_Status *status); int PMPI_Publish_name(char *service_name, MPI_Info info, char *port_name); int PMPI_Put(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Win win); int PMPI_Query_thread(int *provided); int PMPI_Recv_init(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Recv(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Status *status); int PMPI_Reduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, int root, MPI_Comm comm); int PMPI_Ireduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Reduce_local(void *inbuf, void *inoutbuf, int count, MPI_Datatype datatype, MPI_Op); int PMPI_Reduce_scatter(void *sendbuf, void *recvbuf, int *recvcounts, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int PMPI_Ireduce_scatter(void *sendbuf, void *recvbuf, int *recvcounts, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int PMPI_Reduce_scatter_block(void *sendbuf, void *recvbuf, int recvcount, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int PMPI_Ireduce_scatter_block(void *sendbuf, void *recvbuf, int recvcount, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int PMPI_Register_datarep(char *datarep, MPI_Datarep_conversion_function *read_conversion_fn, MPI_Datarep_conversion_function *write_conversion_fn, MPI_Datarep_extent_function *dtype_file_extent_fn, void *extra_state); int PMPI_Request_c2f(MPI_Request request); MPI_Request PMPI_Request_f2c(int request); int PMPI_Request_free(MPI_Request *request); int PMPI_Request_get_status(MPI_Request request, int *flag, MPI_Status *status); int PMPI_Rsend(void *ibuf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int PMPI_Rsend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Scan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int PMPI_Iscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int PMPI_Scatter(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int PMPI_Iscatter(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Scatterv(void *sendbuf, int *sendcounts, int *displs, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int PMPI_Iscatterv(void *sendbuf, int *sendcounts, int *displs, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Send_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Send(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int PMPI_Sendrecv(void *sendbuf, int sendcount, MPI_Datatype sendtype, int dest, int sendtag, void *recvbuf, int recvcount, MPI_Datatype recvtype, int source, int recvtag, MPI_Comm comm, MPI_Status *status); int PMPI_Sendrecv_replace(void * buf, int count, MPI_Datatype datatype, int dest, int sendtag, int source, int recvtag, MPI_Comm comm, MPI_Status *status); int PMPI_Ssend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Ssend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int PMPI_Start(MPI_Request *request); int PMPI_Startall(int count, MPI_Request *array_of_requests); int PMPI_Status_c2f(MPI_Status *c_status, int *f_status); int PMPI_Status_f2c(int *f_status, MPI_Status *c_status); int PMPI_Status_set_cancelled(MPI_Status *status, int flag); int PMPI_Status_set_elements(MPI_Status *status, MPI_Datatype datatype, int count); int PMPI_Testall(int count, MPI_Request array_of_requests[], int *flag, MPI_Status array_of_statuses[]); int PMPI_Testany(int count, MPI_Request array_of_requests[], int *index, int *flag, MPI_Status *status); int PMPI_Test(MPI_Request *request, int *flag, MPI_Status *status); int PMPI_Test_cancelled(MPI_Status *status, int *flag); int PMPI_Testsome(int incount, MPI_Request array_of_requests[], int *outcount, int array_of_indices[], MPI_Status array_of_statuses[]); int PMPI_Topo_test(MPI_Comm comm, int *status); int PMPI_Type_c2f(MPI_Datatype datatype); int PMPI_Type_commit(MPI_Datatype *type); int PMPI_Type_contiguous(int count, MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_darray(int size, int rank, int ndims, int gsize_array[], int distrib_array[], int darg_array[], int psize_array[], int order, MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_f90_complex(int p, int r, MPI_Datatype *newtype); int PMPI_Type_create_f90_integer(int r, MPI_Datatype *newtype); int PMPI_Type_create_f90_real(int p, int r, MPI_Datatype *newtype); int PMPI_Type_create_hindexed(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_hvector(int count, int blocklength, MPI_Aint stride, MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_keyval(MPI_Type_copy_attr_function *type_copy_attr_fn, MPI_Type_delete_attr_function *type_delete_attr_fn, int *type_keyval, void *extra_state); int PMPI_Type_create_indexed_block(int count, int blocklength, int array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_struct(int count, int array_of_block_lengths[], MPI_Aint array_of_displacements[], MPI_Datatype array_of_types[], MPI_Datatype *newtype); int PMPI_Type_create_subarray(int ndims, int size_array[], int subsize_array[], int start_array[], int order, MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_resized(MPI_Datatype oldtype, MPI_Aint lb, MPI_Aint extent, MPI_Datatype *newtype); int PMPI_Type_delete_attr(MPI_Datatype type, int type_keyval); int PMPI_Type_dup(MPI_Datatype type, MPI_Datatype *newtype); int PMPI_Type_extent(MPI_Datatype type, MPI_Aint *extent) ; int PMPI_Type_free(MPI_Datatype *type); int PMPI_Type_free_keyval(int *type_keyval); MPI_Datatype PMPI_Type_f2c(int datatype); int PMPI_Type_get_attr(MPI_Datatype type, int type_keyval, void *attribute_val, int *flag); int PMPI_Type_get_contents(MPI_Datatype mtype, int max_integers, int max_addresses, int max_datatypes, int array_of_integers[], MPI_Aint array_of_addresses[], MPI_Datatype array_of_datatypes[]); int PMPI_Type_get_envelope(MPI_Datatype type, int *num_integers, int *num_addresses, int *num_datatypes, int *combiner); int PMPI_Type_get_extent(MPI_Datatype type, MPI_Aint *lb, MPI_Aint *extent); int PMPI_Type_get_name(MPI_Datatype type, char *type_name, int *resultlen); int PMPI_Type_get_true_extent(MPI_Datatype datatype, MPI_Aint *true_lb, MPI_Aint *true_extent); int PMPI_Type_hindexed(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype) ; int PMPI_Type_hvector(int count, int blocklength, MPI_Aint stride, MPI_Datatype oldtype, MPI_Datatype *newtype) ; int PMPI_Type_indexed(int count, int array_of_blocklengths[], int array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_lb(MPI_Datatype type, MPI_Aint *lb) ; int PMPI_Type_match_size(int typeclass, int size, MPI_Datatype *type); int PMPI_Type_set_attr(MPI_Datatype type, int type_keyval, void *attr_val); int PMPI_Type_set_name(MPI_Datatype type, char *type_name); int PMPI_Type_size(MPI_Datatype type, int *size); int PMPI_Type_struct(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype array_of_types[], MPI_Datatype *newtype) ; int PMPI_Type_ub(MPI_Datatype mtype, MPI_Aint *ub) ; int PMPI_Type_vector(int count, int blocklength, int stride, MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Unpack(void *inbuf, int insize, int *position, void *outbuf, int outcount, MPI_Datatype datatype, MPI_Comm comm); int PMPI_Unpublish_name(char *service_name, MPI_Info info, char *port_name); int PMPI_Unpack_external (char *datarep, void *inbuf, MPI_Aint insize, MPI_Aint *position, void *outbuf, int outcount, MPI_Datatype datatype); int PMPI_Waitall(int count, MPI_Request *array_of_requests, MPI_Status *array_of_statuses); int PMPI_Waitany(int count, MPI_Request *array_of_requests, int *index, MPI_Status *status); int PMPI_Wait(MPI_Request *request, MPI_Status *status); int PMPI_Waitsome(int incount, MPI_Request *array_of_requests, int *outcount, int *array_of_indices, MPI_Status *array_of_statuses); int PMPI_Win_c2f(MPI_Win win); int PMPI_Win_call_errhandler(MPI_Win win, int errorcode); int PMPI_Win_complete(MPI_Win win); int PMPI_Win_create(void *base, MPI_Aint size, int disp_unit, MPI_Info info, MPI_Comm comm, MPI_Win *win); int PMPI_Win_create_errhandler(MPI_Win_errhandler_function *function, MPI_Errhandler *errhandler); int PMPI_Win_create_keyval(MPI_Win_copy_attr_function *win_copy_attr_fn, MPI_Win_delete_attr_function *win_delete_attr_fn, int *win_keyval, void *extra_state); int PMPI_Win_delete_attr(MPI_Win win, int win_keyval); MPI_Win PMPI_Win_f2c(int win); int PMPI_Win_fence(int assert, MPI_Win win); int PMPI_Win_free(MPI_Win *win); int PMPI_Win_free_keyval(int *win_keyval); int PMPI_Win_get_attr(MPI_Win win, int win_keyval, void *attribute_val, int *flag); int PMPI_Win_get_errhandler(MPI_Win win, MPI_Errhandler *errhandler); int PMPI_Win_get_group(MPI_Win win, MPI_Group *group); int PMPI_Win_get_name(MPI_Win win, char *win_name, int *resultlen); int PMPI_Win_lock(int lock_type, int rank, int assert, MPI_Win win); int PMPI_Win_post(MPI_Group group, int assert, MPI_Win win); int PMPI_Win_set_attr(MPI_Win win, int win_keyval, void *attribute_val); int PMPI_Win_set_errhandler(MPI_Win win, MPI_Errhandler errhandler); int PMPI_Win_set_name(MPI_Win win, char *win_name); int PMPI_Win_start(MPI_Group group, int assert, MPI_Win win); int PMPI_Win_test(MPI_Win win, int *flag); int PMPI_Win_unlock(int rank, MPI_Win win); int PMPI_Win_wait(MPI_Win win); double PMPI_Wtick(void); double PMPI_Wtime(void); #line 2281 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c" int ompi_major = 1; int ompi_minor = 6; int ompi_release = 3; Defined "HAVE_OMPI_MAJOR_VERSION" to "1" Defined "HAVE_OMPI_MINOR_VERSION" to "6" Defined "HAVE_OMPI_RELEASE_VERSION" to "3" Checking for functions [MPI_Alltoallw] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Alltoallw(); static void _check_MPI_Alltoallw() { MPI_Alltoallw(); } int main() { _check_MPI_Alltoallw();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Checking for functions [MPI_Type_create_indexed_block] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Type_create_indexed_block(); static void _check_MPI_Type_create_indexed_block() { MPI_Type_create_indexed_block(); } int main() { _check_MPI_Type_create_indexed_block();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Defined "HAVE_MPI_ALLTOALLW" to "1" Checking for functions [MPI_Win_create] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Win_create(); static void _check_MPI_Win_create() { MPI_Win_create(); } int main() { _check_MPI_Win_create();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Defined "HAVE_MPI_WIN_CREATE" to "1" Defined "HAVE_MPI_REPLACE" to "1" Checking for functions [MPI_Comm_spawn MPI_Type_get_envelope MPI_Type_get_extent MPI_Type_dup MPI_Init_thread MPI_Iallreduce MPI_Ibarrier MPI_Finalized MPI_Exscan] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Comm_spawn(); static void _check_MPI_Comm_spawn() { MPI_Comm_spawn(); } char MPI_Type_get_envelope(); static void _check_MPI_Type_get_envelope() { MPI_Type_get_envelope(); } char MPI_Type_get_extent(); static void _check_MPI_Type_get_extent() { MPI_Type_get_extent(); } char MPI_Type_dup(); static void _check_MPI_Type_dup() { MPI_Type_dup(); } char MPI_Init_thread(); static void _check_MPI_Init_thread() { MPI_Init_thread(); } char MPI_Iallreduce(); static void _check_MPI_Iallreduce() { MPI_Iallreduce(); } char MPI_Ibarrier(); static void _check_MPI_Ibarrier() { MPI_Ibarrier(); } char MPI_Finalized(); static void _check_MPI_Finalized() { MPI_Finalized(); } char MPI_Exscan(); static void _check_MPI_Exscan() { MPI_Exscan(); } int main() { _check_MPI_Comm_spawn(); _check_MPI_Type_get_envelope(); _check_MPI_Type_get_extent(); _check_MPI_Type_dup(); _check_MPI_Init_thread(); _check_MPI_Iallreduce(); _check_MPI_Ibarrier(); _check_MPI_Finalized(); _check_MPI_Exscan();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Defined "HAVE_MPI_COMM_SPAWN" to "1" Defined "HAVE_MPI_TYPE_GET_ENVELOPE" to "1" Defined "HAVE_MPI_TYPE_GET_EXTENT" to "1" Defined "HAVE_MPI_TYPE_DUP" to "1" Defined "HAVE_MPI_INIT_THREAD" to "1" Defined "HAVE_MPI_IALLREDUCE" to "1" Defined "HAVE_MPI_IBARRIER" to "1" Defined "HAVE_MPI_FINALIZED" to "1" Defined "HAVE_MPI_EXSCAN" to "1" Checking for functions [MPIX_Iallreduce] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPIX_Iallreduce(); static void _check_MPIX_Iallreduce() { MPIX_Iallreduce(); } int main() { _check_MPIX_Iallreduce();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o: In function `_check_MPIX_Iallreduce': conftest.c:(.text+0x4): undefined reference to `MPIX_Iallreduce' Popping language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c", line 6: warning: variable "combiner" was declared but never referenced int combiner = MPI_COMBINER_DUP;; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { int combiner = MPI_COMBINER_DUP;; return 0; } Defined "HAVE_MPI_COMBINER_DUP" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c", line 6: warning: variable "combiner" was declared but never referenced int combiner = MPI_COMBINER_CONTIGUOUS;; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { int combiner = MPI_COMBINER_CONTIGUOUS;; return 0; } Defined "HAVE_MPI_COMBINER_CONTIGUOUS" to "1" Checking for functions [MPIDI_CH3I_sock_set] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPIDI_CH3I_sock_set(); static void _check_MPIDI_CH3I_sock_set() { MPIDI_CH3I_sock_set(); } int main() { _check_MPIDI_CH3I_sock_set();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o: In function `_check_MPIDI_CH3I_sock_set': conftest.c:(.text+0x4): undefined reference to `MPIDI_CH3I_sock_set' Popping language C Checking for functions [MPIDI_CH3I_sock_fixed_nbc_progress] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPIDI_CH3I_sock_fixed_nbc_progress(); static void _check_MPIDI_CH3I_sock_fixed_nbc_progress() { MPIDI_CH3I_sock_fixed_nbc_progress(); } int main() { _check_MPIDI_CH3I_sock_fixed_nbc_progress();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o: In function `_check_MPIDI_CH3I_sock_fixed_nbc_progress': conftest.c:(.text+0x4): undefined reference to `MPIDI_CH3I_sock_fixed_nbc_progress' Popping language C ================================================================================ TEST checkSharedLibrary from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:130) TESTING: checkSharedLibrary from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:130) Sets flag indicating if MPI libraries are shared or not and determines if MPI libraries CANNOT be used by shared libraries ================================================================================ TEST configureMPIEXEC from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:143) TESTING: configureMPIEXEC from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:143) Checking for mpiexec Checking for program /opt/FJSVtclang/check/mpiexec...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/mpiexec...found Defined make macro "MPIEXEC" to "mpiexec" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #ifdef __cplusplus extern "C" #endif int init(int argc, char *argv[]) { int isInitialized; MPI_Init(&argc, &argv); MPI_Initialized(&isInitialized); return (int) isInitialized; } Pushing language C Popping language C Executing: /usr/bin/ar cr /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/libconftest.a /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o ; /usr/bin/ranlib /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/libconftest.a Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #ifdef __cplusplus extern "C" #endif int checkInit(void) { int isInitialized; MPI_Initialized(&isInitialized); if (isInitialized) MPI_Finalize(); return (int) isInitialized; } Pushing language C Popping language C Executing: /usr/bin/ar cr /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/libconftest.a /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/conftest.o ; /usr/bin/ranlib /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI/libconftest.a Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #ifdef PETSC_HAVE_DLFCN_H #include #endif int main() { int argc = 1; char *argv[2] = {(char *) "conftest", NULL}; void *lib; int (*init)(int, char **); int (*checkInit)(void); lib = dlopen("/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/lib1.a", RTLD_LAZY); if (!lib) { fprintf(stderr, "Could not open lib1.so: %s\n", dlerror()); exit(1); } init = (int (*)(int, char **)) dlsym(lib, "init"); if (!init) { fprintf(stderr, "Could not find initialization function\n"); exit(1); } if (!(*init)(argc, argv)) { fprintf(stderr, "Could not initialize library\n"); exit(1); } lib = dlopen("/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/lib2.a", RTLD_LAZY); if (!lib) { fprintf(stderr, "Could not open lib2.so: %s\n", dlerror()); exit(1); } checkInit = (int (*)(void)) dlsym(lib, "checkInit"); if (!checkInit) { fprintf(stderr, "Could not find initialization check function\n"); exit(1); } if (!(*checkInit)()) { fprintf(stderr, "Did not link with shared library\n"); exit(2); } ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest to see if it can be run Executing: mpiexec /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest Executing: mpiexec /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest ERROR while running executable: Could not execute "mpiexec /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest": [ERR.] PLE 0015 plexec cannot execute as sequential job. Library was not shared Popping language C ================================================================================ TEST alternateConfigureLibrary from config.packages.tetgen(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.tetgen(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.yaml(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.yaml(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.ctetgen(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.ctetgen(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.sprng(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.sprng(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default Pushing language C ================================================================================ TEST configureLibrary from config.packages.ssl(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/ssl.py:23) TESTING: configureLibrary from config.packages.ssl(config/BuildSystem/config/packages/ssl.py:23) ================================================================================== Checking for a functional ssl Checking for library in Compiler specific search SSL: [] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [SSLv23_method] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char SSLv23_method(); static void _check_SSLv23_method() { SSLv23_method(); } int main() { _check_SSLv23_method();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o: In function `_check_SSLv23_method': conftest.c:(.text+0x4): undefined reference to `SSLv23_method' Popping language C Checking for library in Compiler specific search SSL: ['libssl.a', 'libcrypto.a'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [SSLv23_method] in library ['libssl.a', 'libcrypto.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char SSLv23_method(); static void _check_SSLv23_method() { SSLv23_method(); } int main() { _check_SSLv23_method();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -lssl -lcrypto -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_LIBSSL" to "1" Defined "HAVE_LIBCRYPTO" to "1" Popping language C Checking for headers Compiler specific search SSL: [] Pushing language C ================================================================================ TEST checkInclude from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['openssl/ssl.h'] in [] Checking include with compiler flags var CPPFLAGS [] Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 128 "/usr/include/openssl/e_os2.h" #line 137 "/usr/include/openssl/e_os2.h" #line 151 "/usr/include/openssl/e_os2.h" #line 165 "/usr/include/openssl/e_os2.h" #line 206 "/usr/include/openssl/e_os2.h" #line 229 "/usr/include/openssl/e_os2.h" #line 264 "/usr/include/openssl/e_os2.h" #line 288 "/usr/include/openssl/e_os2.h" #line 174 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/comp.h" #line 1 "/usr/include/openssl/crypto.h" #line 1 "/usr/include/stdlib.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/stdlib.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef int wchar_t; #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 34 "/usr/include/stdlib.h" #line 95 "/usr/include/stdlib.h" typedef struct { int quot; int rem; } div_t; typedef struct { long int quot; long int rem; } ldiv_t; typedef struct { long long int quot; long long int rem; } lldiv_t; extern size_t __ctype_get_mb_cur_max (void) ; extern double atof (const char *__nptr) ; extern int atoi (const char *__nptr) ; extern long int atol (const char *__nptr) ; extern long long int atoll (const char *__nptr) ; extern double strtod (const char * __nptr, char ** __endptr) ; extern float strtof (const char * __nptr, char ** __endptr) ; extern long double strtold (const char * __nptr, char ** __endptr) ; extern long int strtol (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long int strtoul (const char * __nptr, char ** __endptr, int __base) ; extern long long int strtoq (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long long int strtouq (const char * __nptr, char ** __endptr, int __base) ; extern long long int strtoll (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long long int strtoull (const char * __nptr, char ** __endptr, int __base) ; #line 274 "/usr/include/stdlib.h" #line 305 "/usr/include/stdlib.h" extern char *l64a (long int __n) ; extern long int a64l (const char *__s) ; #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; typedef char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 321 "/usr/include/stdlib.h" extern long int random (void) ; extern void srandom (unsigned int __seed) ; extern char *initstate (unsigned int __seed, char *__statebuf, size_t __statelen) ; extern char *setstate (char *__statebuf) ; struct random_data { int32_t *fptr; int32_t *rptr; int32_t *state; int rand_type; int rand_deg; int rand_sep; int32_t *end_ptr; }; extern int random_r (struct random_data * __buf, int32_t * __result) ; extern int srandom_r (unsigned int __seed, struct random_data *__buf) ; extern int initstate_r (unsigned int __seed, char * __statebuf, size_t __statelen, struct random_data * __buf) ; extern int setstate_r (char * __statebuf, struct random_data * __buf) ; extern int rand (void) ; extern void srand (unsigned int __seed) ; extern int rand_r (unsigned int *__seed) ; extern double drand48 (void) ; extern double erand48 (unsigned short int __xsubi[3]) ; extern long int lrand48 (void) ; extern long int nrand48 (unsigned short int __xsubi[3]) ; extern long int mrand48 (void) ; extern long int jrand48 (unsigned short int __xsubi[3]) ; extern void srand48 (long int __seedval) ; extern unsigned short int *seed48 (unsigned short int __seed16v[3]) ; extern void lcong48 (unsigned short int __param[7]) ; struct drand48_data { unsigned short int __x[3]; unsigned short int __old_x[3]; unsigned short int __c; unsigned short int __init; unsigned long long int __a; }; extern int drand48_r (struct drand48_data * __buffer, double * __result) ; extern int erand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, double * __result) ; extern int lrand48_r (struct drand48_data * __buffer, long int * __result) ; extern int nrand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, long int * __result) ; extern int mrand48_r (struct drand48_data * __buffer, long int * __result) ; extern int jrand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, long int * __result) ; extern int srand48_r (long int __seedval, struct drand48_data *__buffer) ; extern int seed48_r (unsigned short int __seed16v[3], struct drand48_data *__buffer) ; extern int lcong48_r (unsigned short int __param[7], struct drand48_data *__buffer) ; extern void *malloc (size_t __size) ; extern void *calloc (size_t __nmemb, size_t __size) ; extern void *realloc (void *__ptr, size_t __size) ; extern void free (void *__ptr) ; extern void cfree (void *__ptr) ; #line 1 "/usr/include/alloca.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/alloca.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 26 "/usr/include/alloca.h" extern void *alloca (size_t __size) ; #line 498 "/usr/include/stdlib.h" extern void *valloc (size_t __size) ; extern int posix_memalign (void **__memptr, size_t __alignment, size_t __size) ; extern void abort (void) ; extern int atexit (void (*__func) (void)) ; extern int on_exit (void (*__func) (int __status, void *__arg), void *__arg) ; extern void exit (int __status) ; extern void _Exit (int __status) ; extern char *getenv (const char *__name) ; extern char *__secure_getenv (const char *__name) ; extern int putenv (char *__string) ; extern int setenv (const char *__name, const char *__value, int __replace) ; extern int unsetenv (const char *__name) ; extern int clearenv (void) ; extern char *mktemp (char *__template) ; extern int mkstemp (char *__template) ; #line 607 "/usr/include/stdlib.h" extern char *mkdtemp (char *__template) ; #line 638 "/usr/include/stdlib.h" extern int system (const char *__command) ; #line 655 "/usr/include/stdlib.h" extern char *realpath (const char * __name, char * __resolved) ; typedef int (*__compar_fn_t) (const void *, const void *); extern void *bsearch (const void *__key, const void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; extern void qsort (void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; extern int abs (int __x) ; extern long int labs (long int __x) ; extern long long int llabs (long long int __x) ; extern div_t div (int __numer, int __denom) ; extern ldiv_t ldiv (long int __numer, long int __denom) ; extern lldiv_t lldiv (long long int __numer, long long int __denom) ; extern char *ecvt (double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *fcvt (double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *gcvt (double __value, int __ndigit, char *__buf) ; extern char *qecvt (long double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *qfcvt (long double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *qgcvt (long double __value, int __ndigit, char *__buf) ; extern int ecvt_r (double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int fcvt_r (double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int qecvt_r (long double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int qfcvt_r (long double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int mblen (const char *__s, size_t __n) ; extern int mbtowc (wchar_t * __pwc, const char * __s, size_t __n) ; extern int wctomb (char *__s, wchar_t __wchar) ; extern size_t mbstowcs (wchar_t * __pwcs, const char * __s, size_t __n) ; extern size_t wcstombs (char * __s, const wchar_t * __pwcs, size_t __n) ; extern int rpmatch (const char *__response) ; #line 820 "/usr/include/stdlib.h" extern int posix_openpt (int __oflag) ; #line 851 "/usr/include/stdlib.h" #line 862 "/usr/include/stdlib.h" extern int getloadavg (double __loadavg[], int __nelem) ; #line 879 "/usr/include/stdlib.h" #line 121 "/usr/include/openssl/crypto.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 123 "/usr/include/openssl/crypto.h" #line 1 "/usr/include/stdio.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 29 "/usr/include/stdio.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 35 "/usr/include/stdio.h" struct _IO_FILE; typedef struct _IO_FILE FILE; typedef struct _IO_FILE __FILE; #line 1 "/usr/include/libio.h" #line 1 "/usr/include/_G_config.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 16 "/usr/include/_G_config.h" #line 1 "/usr/include/wchar.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned int wint_t; #line 53 "/usr/include/wchar.h" #line 64 "/usr/include/wchar.h" #line 74 "/usr/include/wchar.h" typedef struct { int __count; union { wint_t __wch; char __wchb[4]; } __value; } __mbstate_t; #line 841 "/usr/include/wchar.h" #line 21 "/usr/include/_G_config.h" typedef struct { __off_t __pos; __mbstate_t __state; } _G_fpos_t; typedef struct { __off64_t __pos; __mbstate_t __state; } _G_fpos64_t; #line 52 "/usr/include/_G_config.h" typedef int _G_int16_t ; typedef int _G_int32_t ; typedef unsigned int _G_uint16_t ; typedef unsigned int _G_uint32_t ; #line 74 "/usr/include/_G_config.h" #line 33 "/usr/include/libio.h" #line 49 "/usr/include/libio.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stdarg.h" typedef void *va_list; #line 27 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stdarg.h" #line 38 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stdarg.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stdarg.h" #line 54 "/usr/include/libio.h" #line 73 "/usr/include/libio.h" #line 88 "/usr/include/libio.h" #line 104 "/usr/include/libio.h" #line 113 "/usr/include/libio.h" #line 139 "/usr/include/libio.h" #line 149 "/usr/include/libio.h" #line 168 "/usr/include/libio.h" struct _IO_jump_t; struct _IO_FILE; #line 180 "/usr/include/libio.h" typedef void _IO_lock_t; struct _IO_marker { struct _IO_marker *_next; struct _IO_FILE *_sbuf; int _pos; #line 203 "/usr/include/libio.h" }; enum __codecvt_result { __codecvt_ok, __codecvt_partial, __codecvt_error, __codecvt_noconv }; #line 270 "/usr/include/libio.h" struct _IO_FILE { int _flags; char* _IO_read_ptr; char* _IO_read_end; char* _IO_read_base; char* _IO_write_base; char* _IO_write_ptr; char* _IO_write_end; char* _IO_buf_base; char* _IO_buf_end; char *_IO_save_base; char *_IO_backup_base; char *_IO_save_end; struct _IO_marker *_markers; struct _IO_FILE *_chain; int _fileno; int _flags2; __off_t _old_offset; unsigned short _cur_column; signed char _vtable_offset; char _shortbuf[1]; _IO_lock_t *_lock; #line 319 "/usr/include/libio.h" __off64_t _offset; #line 328 "/usr/include/libio.h" void *__pad1; void *__pad2; void *__pad3; void *__pad4; size_t __pad5; int _mode; char _unused2[15 * sizeof (int) - 4 * sizeof (void *) - sizeof (size_t)]; }; typedef struct _IO_FILE _IO_FILE; struct _IO_FILE_plus; extern struct _IO_FILE_plus _IO_2_1_stdin_; extern struct _IO_FILE_plus _IO_2_1_stdout_; extern struct _IO_FILE_plus _IO_2_1_stderr_; #line 358 "/usr/include/libio.h" typedef __ssize_t __io_read_fn (void *__cookie, char *__buf, size_t __nbytes); typedef __ssize_t __io_write_fn (void *__cookie, const char *__buf, size_t __n); typedef int __io_seek_fn (void *__cookie, __off64_t *__pos, int __w); typedef int __io_close_fn (void *__cookie); #line 410 "/usr/include/libio.h" extern int __underflow (_IO_FILE *); extern int __uflow (_IO_FILE *); extern int __overflow (_IO_FILE *, int); #line 442 "/usr/include/libio.h" #line 454 "/usr/include/libio.h" extern int _IO_getc (_IO_FILE *__fp); extern int _IO_putc (int __c, _IO_FILE *__fp); extern int _IO_feof (_IO_FILE *__fp) ; extern int _IO_ferror (_IO_FILE *__fp) ; extern int _IO_peekc_locked (_IO_FILE *__fp); extern void _IO_flockfile (_IO_FILE *) ; extern void _IO_funlockfile (_IO_FILE *) ; extern int _IO_ftrylockfile (_IO_FILE *) ; #line 487 "/usr/include/libio.h" extern int _IO_vfscanf (_IO_FILE * , const char * , va_list, int *); extern int _IO_vfprintf (_IO_FILE *, const char *, va_list); extern __ssize_t _IO_padn (_IO_FILE *, int, __ssize_t); extern size_t _IO_sgetn (_IO_FILE *, void *, size_t); extern __off64_t _IO_seekoff (_IO_FILE *, __off64_t, int, int); extern __off64_t _IO_seekpos (_IO_FILE *, __off64_t, int); extern void _IO_free_backup_area (_IO_FILE *) ; #line 544 "/usr/include/libio.h" #line 76 "/usr/include/stdio.h" #line 87 "/usr/include/stdio.h" typedef _G_fpos_t fpos_t; #line 1 "/usr/include/bits/stdio_lim.h" #line 142 "/usr/include/stdio.h" extern struct _IO_FILE *stdin; extern struct _IO_FILE *stdout; extern struct _IO_FILE *stderr; extern int remove (const char *__filename) ; extern int rename (const char *__old, const char *__new) ; extern FILE *tmpfile (void) ; #line 182 "/usr/include/stdio.h" extern char *tmpnam (char *__s) ; extern char *tmpnam_r (char *__s) ; extern char *tempnam (const char *__dir, const char *__pfx) ; extern int fclose (FILE *__stream); extern int fflush (FILE *__stream); extern int fflush_unlocked (FILE *__stream); #line 243 "/usr/include/stdio.h" extern FILE *fopen (const char * __filename, const char * __modes) ; extern FILE *freopen (const char * __filename, const char * __modes, FILE * __stream) ; #line 274 "/usr/include/stdio.h" #line 282 "/usr/include/stdio.h" extern FILE *fdopen (int __fd, const char *__modes) ; #line 304 "/usr/include/stdio.h" extern void setbuf (FILE * __stream, char * __buf) ; extern int setvbuf (FILE * __stream, char * __buf, int __modes, size_t __n) ; extern void setbuffer (FILE * __stream, char * __buf, size_t __size) ; extern void setlinebuf (FILE *__stream) ; extern int fprintf (FILE * __stream, const char * __format, ...); extern int printf (const char * __format, ...); extern int sprintf (char * __s, const char * __format, ...) ; extern int vfprintf (FILE * __s, const char * __format, va_list __arg); extern int vprintf (const char * __format, va_list __arg); extern int vsprintf (char * __s, const char * __format, va_list __arg) ; extern int snprintf (char * __s, size_t __maxlen, const char * __format, ...) ; extern int vsnprintf (char * __s, size_t __maxlen, const char * __format, va_list __arg) ; #line 398 "/usr/include/stdio.h" extern int fscanf (FILE * __stream, const char * __format, ...) ; extern int scanf (const char * __format, ...) ; extern int sscanf (const char * __s, const char * __format, ...) ; #line 432 "/usr/include/stdio.h" extern int __isoc99_fscanf (FILE * __stream, const char * __format, ...) ; extern int __isoc99_scanf (const char * __format, ...) ; extern int __isoc99_sscanf (const char * __s, const char * __format, ...) ; extern int vfscanf (FILE * __s, const char * __format, va_list __arg) ; extern int vscanf (const char * __format, va_list __arg) ; extern int vsscanf (const char * __s, const char * __format, va_list __arg) ; #line 488 "/usr/include/stdio.h" extern int __isoc99_vfscanf (FILE * __s, const char * __format, va_list __arg) ; extern int __isoc99_vscanf (const char * __format, va_list __arg) ; extern int __isoc99_vsscanf (const char * __s, const char * __format, va_list __arg) ; extern int fgetc (FILE *__stream); extern int getc (FILE *__stream); extern int getchar (void); extern int getc_unlocked (FILE *__stream); extern int getchar_unlocked (void); extern int fgetc_unlocked (FILE *__stream); extern int fputc (int __c, FILE *__stream); extern int putc (int __c, FILE *__stream); extern int putchar (int __c); extern int fputc_unlocked (int __c, FILE *__stream); extern int putc_unlocked (int __c, FILE *__stream); extern int putchar_unlocked (int __c); extern int getw (FILE *__stream); extern int putw (int __w, FILE *__stream); extern char *fgets (char * __s, int __n, FILE * __stream) ; extern char *gets (char *__s) ; #line 623 "/usr/include/stdio.h" #line 653 "/usr/include/stdio.h" extern int fputs (const char * __s, FILE * __stream); extern int puts (const char *__s); extern int ungetc (int __c, FILE *__stream); extern size_t fread (void * __ptr, size_t __size, size_t __n, FILE * __stream) ; extern size_t fwrite (const void * __ptr, size_t __size, size_t __n, FILE * __s) ; #line 700 "/usr/include/stdio.h" extern size_t fread_unlocked (void * __ptr, size_t __size, size_t __n, FILE * __stream) ; extern size_t fwrite_unlocked (const void * __ptr, size_t __size, size_t __n, FILE * __stream) ; extern int fseek (FILE *__stream, long int __off, int __whence); extern long int ftell (FILE *__stream) ; extern void rewind (FILE *__stream); extern int fseeko (FILE *__stream, __off_t __off, int __whence); extern __off_t ftello (FILE *__stream) ; #line 762 "/usr/include/stdio.h" extern int fgetpos (FILE * __stream, fpos_t * __pos); extern int fsetpos (FILE *__stream, const fpos_t *__pos); #line 786 "/usr/include/stdio.h" #line 794 "/usr/include/stdio.h" extern void clearerr (FILE *__stream) ; extern int feof (FILE *__stream) ; extern int ferror (FILE *__stream) ; extern void clearerr_unlocked (FILE *__stream) ; extern int feof_unlocked (FILE *__stream) ; extern int ferror_unlocked (FILE *__stream) ; extern void perror (const char *__s); #line 1 "/usr/include/bits/sys_errlist.h" extern int sys_nerr; extern const char *const sys_errlist[]; #line 825 "/usr/include/stdio.h" extern int fileno (FILE *__stream) ; extern int fileno_unlocked (FILE *__stream) ; extern FILE *popen (const char *__command, const char *__modes) ; extern int pclose (FILE *__stream); extern char *ctermid (char *__s) ; #line 878 "/usr/include/stdio.h" extern void flockfile (FILE *__stream) ; extern int ftrylockfile (FILE *__stream) ; extern void funlockfile (FILE *__stream) ; #line 901 "/usr/include/stdio.h" #line 913 "/usr/include/stdio.h" #line 126 "/usr/include/openssl/crypto.h" #line 1 "/usr/include/openssl/stack.h" typedef struct stack_st { int num; char **data; int sorted; int num_alloc; int (*comp) (const char *const *, const char *const *); } STACK; int sk_num(const STACK *); char *sk_value(const STACK *, int); char *sk_set(STACK *, int, char *); STACK *sk_new(int (*cmp) (const char *const *, const char *const *)); STACK *sk_new_null(void); void sk_free(STACK *); void sk_pop_free(STACK * st, void (*func) (void *)); int sk_insert(STACK * sk, char *data, int where); char *sk_delete(STACK * st, int loc); char *sk_delete_ptr(STACK * st, char *p); int sk_find(STACK * st, char *data); int sk_find_ex(STACK * st, char *data); int sk_push(STACK * st, char *data); int sk_unshift(STACK * st, char *data); char *sk_shift(STACK * st); char *sk_pop(STACK * st); void sk_zero(STACK * st); int (*sk_set_cmp_func(STACK * sk, int (*c) (const char *const *, const char *const *))) (const char *const *, const char *const *); STACK *sk_dup(STACK * st); void sk_sort(STACK * st); int sk_is_sorted(const STACK * st); #line 129 "/usr/include/openssl/crypto.h" #line 1 "/usr/include/openssl/safestack.h" #line 158 "/usr/include/openssl/safestack.h" #line 207 "/usr/include/openssl/safestack.h" #line 247 "/usr/include/openssl/safestack.h" #line 269 "/usr/include/openssl/safestack.h" #line 291 "/usr/include/openssl/safestack.h" #line 313 "/usr/include/openssl/safestack.h" #line 335 "/usr/include/openssl/safestack.h" #line 357 "/usr/include/openssl/safestack.h" #line 379 "/usr/include/openssl/safestack.h" #line 401 "/usr/include/openssl/safestack.h" #line 423 "/usr/include/openssl/safestack.h" #line 445 "/usr/include/openssl/safestack.h" #line 467 "/usr/include/openssl/safestack.h" #line 489 "/usr/include/openssl/safestack.h" #line 511 "/usr/include/openssl/safestack.h" #line 533 "/usr/include/openssl/safestack.h" #line 555 "/usr/include/openssl/safestack.h" #line 577 "/usr/include/openssl/safestack.h" #line 599 "/usr/include/openssl/safestack.h" #line 621 "/usr/include/openssl/safestack.h" #line 643 "/usr/include/openssl/safestack.h" #line 665 "/usr/include/openssl/safestack.h" #line 687 "/usr/include/openssl/safestack.h" #line 709 "/usr/include/openssl/safestack.h" #line 731 "/usr/include/openssl/safestack.h" #line 753 "/usr/include/openssl/safestack.h" #line 775 "/usr/include/openssl/safestack.h" #line 797 "/usr/include/openssl/safestack.h" #line 819 "/usr/include/openssl/safestack.h" #line 841 "/usr/include/openssl/safestack.h" #line 863 "/usr/include/openssl/safestack.h" #line 885 "/usr/include/openssl/safestack.h" #line 907 "/usr/include/openssl/safestack.h" #line 929 "/usr/include/openssl/safestack.h" #line 951 "/usr/include/openssl/safestack.h" #line 973 "/usr/include/openssl/safestack.h" #line 995 "/usr/include/openssl/safestack.h" #line 1017 "/usr/include/openssl/safestack.h" #line 1039 "/usr/include/openssl/safestack.h" #line 1061 "/usr/include/openssl/safestack.h" #line 1083 "/usr/include/openssl/safestack.h" #line 1105 "/usr/include/openssl/safestack.h" #line 1127 "/usr/include/openssl/safestack.h" #line 1149 "/usr/include/openssl/safestack.h" #line 1171 "/usr/include/openssl/safestack.h" #line 1193 "/usr/include/openssl/safestack.h" #line 1215 "/usr/include/openssl/safestack.h" #line 1237 "/usr/include/openssl/safestack.h" #line 1259 "/usr/include/openssl/safestack.h" #line 1281 "/usr/include/openssl/safestack.h" #line 1303 "/usr/include/openssl/safestack.h" #line 1325 "/usr/include/openssl/safestack.h" #line 1347 "/usr/include/openssl/safestack.h" #line 1369 "/usr/include/openssl/safestack.h" #line 1391 "/usr/include/openssl/safestack.h" #line 1413 "/usr/include/openssl/safestack.h" #line 1435 "/usr/include/openssl/safestack.h" #line 1457 "/usr/include/openssl/safestack.h" #line 1479 "/usr/include/openssl/safestack.h" #line 1501 "/usr/include/openssl/safestack.h" #line 1523 "/usr/include/openssl/safestack.h" #line 1545 "/usr/include/openssl/safestack.h" #line 1567 "/usr/include/openssl/safestack.h" #line 1589 "/usr/include/openssl/safestack.h" #line 1611 "/usr/include/openssl/safestack.h" #line 1633 "/usr/include/openssl/safestack.h" #line 1655 "/usr/include/openssl/safestack.h" #line 1677 "/usr/include/openssl/safestack.h" #line 1699 "/usr/include/openssl/safestack.h" #line 1721 "/usr/include/openssl/safestack.h" #line 1743 "/usr/include/openssl/safestack.h" #line 1765 "/usr/include/openssl/safestack.h" #line 1787 "/usr/include/openssl/safestack.h" #line 1796 "/usr/include/openssl/safestack.h" #line 1805 "/usr/include/openssl/safestack.h" #line 1814 "/usr/include/openssl/safestack.h" #line 1823 "/usr/include/openssl/safestack.h" #line 1832 "/usr/include/openssl/safestack.h" #line 1841 "/usr/include/openssl/safestack.h" #line 1850 "/usr/include/openssl/safestack.h" #line 1859 "/usr/include/openssl/safestack.h" #line 1868 "/usr/include/openssl/safestack.h" #line 1877 "/usr/include/openssl/safestack.h" #line 1886 "/usr/include/openssl/safestack.h" #line 1895 "/usr/include/openssl/safestack.h" #line 1904 "/usr/include/openssl/safestack.h" #line 1913 "/usr/include/openssl/safestack.h" #line 1922 "/usr/include/openssl/safestack.h" #line 1931 "/usr/include/openssl/safestack.h" #line 1940 "/usr/include/openssl/safestack.h" #line 1949 "/usr/include/openssl/safestack.h" #line 1958 "/usr/include/openssl/safestack.h" #line 1967 "/usr/include/openssl/safestack.h" #line 1976 "/usr/include/openssl/safestack.h" #line 1985 "/usr/include/openssl/safestack.h" #line 130 "/usr/include/openssl/crypto.h" #line 1 "/usr/include/openssl/opensslv.h" #line 36 "/usr/include/openssl/opensslv.h" #line 131 "/usr/include/openssl/crypto.h" #line 1 "/usr/include/openssl/ossl_typ.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 59 "/usr/include/openssl/ossl_typ.h" #line 79 "/usr/include/openssl/ossl_typ.h" typedef struct asn1_string_st ASN1_INTEGER; typedef struct asn1_string_st ASN1_ENUMERATED; typedef struct asn1_string_st ASN1_BIT_STRING; typedef struct asn1_string_st ASN1_OCTET_STRING; typedef struct asn1_string_st ASN1_PRINTABLESTRING; typedef struct asn1_string_st ASN1_T61STRING; typedef struct asn1_string_st ASN1_IA5STRING; typedef struct asn1_string_st ASN1_GENERALSTRING; typedef struct asn1_string_st ASN1_UNIVERSALSTRING; typedef struct asn1_string_st ASN1_BMPSTRING; typedef struct asn1_string_st ASN1_UTCTIME; typedef struct asn1_string_st ASN1_TIME; typedef struct asn1_string_st ASN1_GENERALIZEDTIME; typedef struct asn1_string_st ASN1_VISIBLESTRING; typedef struct asn1_string_st ASN1_UTF8STRING; typedef int ASN1_BOOLEAN; typedef int ASN1_NULL; #line 106 "/usr/include/openssl/ossl_typ.h" typedef struct bignum_st BIGNUM; typedef struct bignum_ctx BN_CTX; typedef struct bn_blinding_st BN_BLINDING; typedef struct bn_mont_ctx_st BN_MONT_CTX; typedef struct bn_recp_ctx_st BN_RECP_CTX; typedef struct bn_gencb_st BN_GENCB; typedef struct buf_mem_st BUF_MEM; typedef struct evp_cipher_st EVP_CIPHER; typedef struct evp_cipher_ctx_st EVP_CIPHER_CTX; typedef struct env_md_st EVP_MD; typedef struct env_md_ctx_st EVP_MD_CTX; typedef struct evp_pkey_st EVP_PKEY; typedef struct dh_st DH; typedef struct dh_method DH_METHOD; typedef struct dsa_st DSA; typedef struct dsa_method DSA_METHOD; typedef struct rsa_st RSA; typedef struct rsa_meth_st RSA_METHOD; typedef struct rand_meth_st RAND_METHOD; typedef struct ecdh_method ECDH_METHOD; typedef struct ecdsa_method ECDSA_METHOD; typedef struct x509_st X509; typedef struct X509_algor_st X509_ALGOR; typedef struct X509_crl_st X509_CRL; typedef struct X509_name_st X509_NAME; typedef struct x509_store_st X509_STORE; typedef struct x509_store_ctx_st X509_STORE_CTX; typedef struct ssl_st SSL; typedef struct ssl_ctx_st SSL_CTX; typedef struct v3_ext_ctx X509V3_CTX; typedef struct conf_st CONF; typedef struct store_st STORE; typedef struct store_method_st STORE_METHOD; typedef struct ui_st UI; typedef struct ui_method_st UI_METHOD; typedef struct st_ERR_FNS ERR_FNS; typedef struct engine_st ENGINE; typedef struct X509_POLICY_NODE_st X509_POLICY_NODE; typedef struct X509_POLICY_LEVEL_st X509_POLICY_LEVEL; typedef struct X509_POLICY_TREE_st X509_POLICY_TREE; typedef struct X509_POLICY_CACHE_st X509_POLICY_CACHE; typedef struct crypto_ex_data_st CRYPTO_EX_DATA; typedef int CRYPTO_EX_new (void *parent, void *ptr, CRYPTO_EX_DATA *ad, int idx, long argl, void *argp); typedef void CRYPTO_EX_free (void *parent, void *ptr, CRYPTO_EX_DATA *ad, int idx, long argl, void *argp); typedef int CRYPTO_EX_dup (CRYPTO_EX_DATA *to, CRYPTO_EX_DATA *from, void *from_d, int idx, long argl, void *argp); typedef struct ocsp_req_ctx_st OCSP_REQ_CTX; typedef struct ocsp_response_st OCSP_RESPONSE; typedef struct ocsp_responder_id_st OCSP_RESPID; #line 132 "/usr/include/openssl/crypto.h" #line 1 "/usr/include/openssl/symhacks.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 59 "/usr/include/openssl/symhacks.h" #line 401 "/usr/include/openssl/symhacks.h" #line 434 "/usr/include/openssl/symhacks.h" #line 142 "/usr/include/openssl/crypto.h" #line 173 "/usr/include/openssl/crypto.h" typedef struct openssl_item_st { int code; void *value; size_t value_size; size_t *value_length; } OPENSSL_ITEM; #line 233 "/usr/include/openssl/crypto.h" #line 259 "/usr/include/openssl/crypto.h" typedef struct { int references; struct CRYPTO_dynlock_value *data; } CRYPTO_dynlock; typedef struct bio_st BIO_dummy; struct crypto_ex_data_st { STACK *sk; int dummy; }; typedef struct crypto_ex_data_func_st { long argl; void *argp; CRYPTO_EX_new *new_func; CRYPTO_EX_free *free_func; CRYPTO_EX_dup *dup_func; } CRYPTO_EX_DATA_FUNCS; #line 338 "/usr/include/openssl/crypto.h" void CRYPTO_malloc_debug_init(void); int CRYPTO_mem_ctrl(int mode); int CRYPTO_is_mem_check_on(void); #line 387 "/usr/include/openssl/crypto.h" const char *SSLeay_version(int type); unsigned long SSLeay(void); int OPENSSL_issetugid(void); typedef struct st_CRYPTO_EX_DATA_IMPL CRYPTO_EX_DATA_IMPL; const CRYPTO_EX_DATA_IMPL *CRYPTO_get_ex_data_implementation(void); int CRYPTO_set_ex_data_implementation(const CRYPTO_EX_DATA_IMPL *i); int CRYPTO_ex_data_new_class(void); int CRYPTO_get_ex_new_index(int class_index, long argl, void *argp, CRYPTO_EX_new *new_func, CRYPTO_EX_dup *dup_func, CRYPTO_EX_free *free_func); int CRYPTO_new_ex_data(int class_index, void *obj, CRYPTO_EX_DATA *ad); int CRYPTO_dup_ex_data(int class_index, CRYPTO_EX_DATA *to, CRYPTO_EX_DATA *from); void CRYPTO_free_ex_data(int class_index, void *obj, CRYPTO_EX_DATA *ad); int CRYPTO_set_ex_data(CRYPTO_EX_DATA *ad, int idx, void *val); void *CRYPTO_get_ex_data(const CRYPTO_EX_DATA *ad, int idx); void CRYPTO_cleanup_all_ex_data(void); int CRYPTO_get_new_lockid(char *name); int CRYPTO_num_locks(void); void CRYPTO_lock(int mode, int type, const char *file, int line); void CRYPTO_set_locking_callback(void (*func) (int mode, int type, const char *file, int line)); void (*CRYPTO_get_locking_callback(void)) (int mode, int type, const char *file, int line); void CRYPTO_set_add_lock_callback(int (*func) (int *num, int mount, int type, const char *file, int line)); int (*CRYPTO_get_add_lock_callback(void)) (int *num, int mount, int type, const char *file, int line); void CRYPTO_set_id_callback(unsigned long (*func) (void)); unsigned long (*CRYPTO_get_id_callback(void)) (void); unsigned long CRYPTO_thread_id(void); const char *CRYPTO_get_lock_name(int type); int CRYPTO_add_lock(int *pointer, int amount, int type, const char *file, int line); void int_CRYPTO_set_do_dynlock_callback(void (*do_dynlock_cb) (int mode, int type, const char *file, int line)); int CRYPTO_get_new_dynlockid(void); void CRYPTO_destroy_dynlockid(int i); struct CRYPTO_dynlock_value *CRYPTO_get_dynlock_value(int i); void CRYPTO_set_dynlock_create_callback(struct CRYPTO_dynlock_value *(*dyn_create_function) (const char *file, int line)); void CRYPTO_set_dynlock_lock_callback(void (*dyn_lock_function) (int mode, struct CRYPTO_dynlock_value *l, const char *file, int line)); void CRYPTO_set_dynlock_destroy_callback(void (*dyn_destroy_function) (struct CRYPTO_dynlock_value *l, const char *file, int line)); struct CRYPTO_dynlock_value *(*CRYPTO_get_dynlock_create_callback(void)) (const char *file, int line); void (*CRYPTO_get_dynlock_lock_callback(void)) (int mode, struct CRYPTO_dynlock_value *l, const char *file, int line); void (*CRYPTO_get_dynlock_destroy_callback(void)) (struct CRYPTO_dynlock_value *l, const char *file, int line); int CRYPTO_set_mem_functions(void *(*m) (size_t), void *(*r) (void *, size_t), void (*f) (void *)); int CRYPTO_set_locked_mem_functions(void *(*m) (size_t), void (*free_func) (void *)); int CRYPTO_set_mem_ex_functions(void *(*m) (size_t, const char *, int), void *(*r) (void *, size_t, const char *, int), void (*f) (void *)); int CRYPTO_set_locked_mem_ex_functions(void *(*m) (size_t, const char *, int), void (*free_func) (void *)); int CRYPTO_set_mem_debug_functions(void (*m) (void *, int, const char *, int, int), void (*r) (void *, void *, int, const char *, int, int), void (*f) (void *, int), void (*so) (long), long (*go) (void)); void CRYPTO_set_mem_info_functions(int (*push_info_fn) (const char *info, const char *file, int line), int (*pop_info_fn) (void), int (*remove_all_info_fn) (void)); void CRYPTO_get_mem_functions(void *(**m) (size_t), void *(**r) (void *, size_t), void (**f) (void *)); void CRYPTO_get_locked_mem_functions(void *(**m) (size_t), void (**f) (void *)); void CRYPTO_get_mem_ex_functions(void *(**m) (size_t, const char *, int), void *(**r) (void *, size_t, const char *, int), void (**f) (void *)); void CRYPTO_get_locked_mem_ex_functions(void *(**m) (size_t, const char *, int), void (**f) (void *)); void CRYPTO_get_mem_debug_functions(void (**m) (void *, int, const char *, int, int), void (**r) (void *, void *, int, const char *, int, int), void (**f) (void *, int), void (**so) (long), long (**go) (void)); void *CRYPTO_malloc_locked(int num, const char *file, int line); void CRYPTO_free_locked(void *); void *CRYPTO_malloc(int num, const char *file, int line); char *CRYPTO_strdup(const char *str, const char *file, int line); void CRYPTO_free(void *); void *CRYPTO_realloc(void *addr, int num, const char *file, int line); void *CRYPTO_realloc_clean(void *addr, int old_num, int num, const char *file, int line); void *CRYPTO_remalloc(void *addr, int num, const char *file, int line); void OPENSSL_cleanse(void *ptr, size_t len); void CRYPTO_set_mem_debug_options(long bits); long CRYPTO_get_mem_debug_options(void); int CRYPTO_push_info_(const char *info, const char *file, int line); int CRYPTO_pop_info(void); int CRYPTO_remove_all_info(void); void CRYPTO_dbg_malloc(void *addr, int num, const char *file, int line, int before_p); void CRYPTO_dbg_realloc(void *addr1, void *addr2, int num, const char *file, int line, int before_p); void CRYPTO_dbg_free(void *addr, int before_p); void CRYPTO_dbg_set_options(long bits); long CRYPTO_dbg_get_options(void); int CRYPTO_dbg_push_info(const char *info, const char *file, int line); int CRYPTO_dbg_pop_info(void); int CRYPTO_dbg_remove_all_info(void); void CRYPTO_mem_leaks_fp(FILE *); void CRYPTO_mem_leaks(struct bio_st *bio); typedef void *CRYPTO_MEM_LEAK_CB (unsigned long, const char *, int, int, void *); void CRYPTO_mem_leaks_cb(CRYPTO_MEM_LEAK_CB *cb); void OpenSSLDie(const char *file, int line, const char *assertion); unsigned long *OPENSSL_ia32cap_loc(void); int OPENSSL_isservice(void); #line 633 "/usr/include/openssl/crypto.h" void OPENSSL_init(void); int CRYPTO_memcmp(const void *a, const void *b, size_t len); void ERR_load_CRYPTO_strings(void); #line 673 "/usr/include/openssl/crypto.h" #line 6 "/usr/include/openssl/comp.h" typedef struct comp_ctx_st COMP_CTX; typedef struct comp_method_st { int type; const char *name; int (*init) (COMP_CTX *ctx); void (*finish) (COMP_CTX *ctx); int (*compress) (COMP_CTX *ctx, unsigned char *out, unsigned int olen, unsigned char *in, unsigned int ilen); int (*expand) (COMP_CTX *ctx, unsigned char *out, unsigned int olen, unsigned char *in, unsigned int ilen); long (*ctrl) (void); long (*callback_ctrl) (void); } COMP_METHOD; struct comp_ctx_st { COMP_METHOD *meth; unsigned long compress_in; unsigned long compress_out; unsigned long expand_in; unsigned long expand_out; CRYPTO_EX_DATA ex_data; }; COMP_CTX *COMP_CTX_new(COMP_METHOD *meth); void COMP_CTX_free(COMP_CTX *ctx); int COMP_compress_block(COMP_CTX *ctx, unsigned char *out, int olen, unsigned char *in, int ilen); int COMP_expand_block(COMP_CTX *ctx, unsigned char *out, int olen, unsigned char *in, int ilen); COMP_METHOD *COMP_rle(void); COMP_METHOD *COMP_zlib(void); void COMP_zlib_cleanup(void); void ERR_load_COMP_strings(void); #line 177 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/bio.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 63 "/usr/include/openssl/bio.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stdarg.h" #line 19 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stdarg.h" #line 27 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stdarg.h" #line 38 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stdarg.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stdarg.h" #line 68 "/usr/include/openssl/bio.h" #line 99 "/usr/include/openssl/bio.h" #line 127 "/usr/include/openssl/bio.h" #line 141 "/usr/include/openssl/bio.h" #line 155 "/usr/include/openssl/bio.h" #line 178 "/usr/include/openssl/bio.h" typedef struct bio_st BIO; void BIO_set_flags(BIO *b, int flags); int BIO_test_flags(const BIO *b, int flags); void BIO_clear_flags(BIO *b, int flags); #line 221 "/usr/include/openssl/bio.h" #line 258 "/usr/include/openssl/bio.h" long (*BIO_get_callback(const BIO *b)) (struct bio_st *, int, const char *, int, long, long); void BIO_set_callback(BIO *b, long (*callback) (struct bio_st *, int, const char *, int, long, long)); char *BIO_get_callback_arg(const BIO *b); void BIO_set_callback_arg(BIO *b, char *arg); const char *BIO_method_name(const BIO *b); int BIO_method_type(const BIO *b); typedef void bio_info_cb (struct bio_st *, int, const char *, int, long, long); typedef struct bio_method_st { int type; const char *name; int (*bwrite) (BIO *, const char *, int); int (*bread) (BIO *, char *, int); int (*bputs) (BIO *, const char *); int (*bgets) (BIO *, char *, int); long (*ctrl) (BIO *, int, long, void *); int (*create) (BIO *); int (*destroy) (BIO *); long (*callback_ctrl) (BIO *, int, bio_info_cb *); } BIO_METHOD; #line 309 "/usr/include/openssl/bio.h" struct bio_st { BIO_METHOD *method; long (*callback) (struct bio_st *, int, const char *, int, long, long); char *cb_arg; int init; int shutdown; int flags; int retry_reason; int num; void *ptr; struct bio_st *next_bio; struct bio_st *prev_bio; int references; unsigned long num_read; unsigned long num_write; CRYPTO_EX_DATA ex_data; }; typedef struct bio_f_buffer_ctx_struct { int ibuf_size; int obuf_size; char *ibuf; int ibuf_len; int ibuf_off; char *obuf; int obuf_len; int obuf_off; } BIO_F_BUFFER_CTX; #line 363 "/usr/include/openssl/bio.h" #line 404 "/usr/include/openssl/bio.h" #line 418 "/usr/include/openssl/bio.h" #line 431 "/usr/include/openssl/bio.h" #line 495 "/usr/include/openssl/bio.h" #line 511 "/usr/include/openssl/bio.h" #line 537 "/usr/include/openssl/bio.h" size_t BIO_ctrl_pending(BIO *b); size_t BIO_ctrl_wpending(BIO *b); size_t BIO_ctrl_get_write_guarantee(BIO *b); size_t BIO_ctrl_get_read_request(BIO *b); int BIO_ctrl_reset_read_request(BIO *b); #line 574 "/usr/include/openssl/bio.h" int BIO_set_ex_data(BIO *bio, int idx, void *data); void *BIO_get_ex_data(BIO *bio, int idx); int BIO_get_ex_new_index(long argl, void *argp, CRYPTO_EX_new *new_func, CRYPTO_EX_dup *dup_func, CRYPTO_EX_free *free_func); unsigned long BIO_number_read(BIO *bio); unsigned long BIO_number_written(BIO *bio); #line 594 "/usr/include/openssl/bio.h" BIO_METHOD *BIO_s_file(void); BIO *BIO_new_file(const char *filename, const char *mode); BIO *BIO_new_fp(FILE *stream, int close_flag); BIO *BIO_new(BIO_METHOD *type); int BIO_set(BIO *a, BIO_METHOD *type); int BIO_free(BIO *a); void BIO_vfree(BIO *a); int BIO_read(BIO *b, void *data, int len); int BIO_gets(BIO *bp, char *buf, int size); int BIO_write(BIO *b, const void *data, int len); int BIO_puts(BIO *bp, const char *buf); int BIO_indent(BIO *b, int indent, int max); long BIO_ctrl(BIO *bp, int cmd, long larg, void *parg); long BIO_callback_ctrl(BIO *b, int cmd, void (*fp) (struct bio_st *, int, const char *, int, long, long)); char *BIO_ptr_ctrl(BIO *bp, int cmd, long larg); long BIO_int_ctrl(BIO *bp, int cmd, long larg, int iarg); BIO *BIO_push(BIO *b, BIO *append); BIO *BIO_pop(BIO *b); void BIO_free_all(BIO *a); BIO *BIO_find_type(BIO *b, int bio_type); BIO *BIO_next(BIO *b); BIO *BIO_get_retry_BIO(BIO *bio, int *reason); int BIO_get_retry_reason(BIO *bio); BIO *BIO_dup_chain(BIO *in); int BIO_nread0(BIO *bio, char **buf); int BIO_nread(BIO *bio, char **buf, int num); int BIO_nwrite0(BIO *bio, char **buf); int BIO_nwrite(BIO *bio, char **buf, int num); long BIO_debug_callback(BIO *bio, int cmd, const char *argp, int argi, long argl, long ret); BIO_METHOD *BIO_s_mem(void); BIO *BIO_new_mem_buf(void *buf, int len); BIO_METHOD *BIO_s_socket(void); BIO_METHOD *BIO_s_connect(void); BIO_METHOD *BIO_s_accept(void); BIO_METHOD *BIO_s_fd(void); BIO_METHOD *BIO_s_log(void); BIO_METHOD *BIO_s_bio(void); BIO_METHOD *BIO_s_null(void); BIO_METHOD *BIO_f_null(void); BIO_METHOD *BIO_f_buffer(void); BIO_METHOD *BIO_f_nbio_test(void); BIO_METHOD *BIO_s_datagram(void); int BIO_sock_should_retry(int i); int BIO_sock_non_fatal_error(int error); int BIO_dgram_non_fatal_error(int error); int BIO_fd_should_retry(int i); int BIO_fd_non_fatal_error(int error); int BIO_dump_cb(int (*cb) (const void *data, size_t len, void *u), void *u, const char *s, int len); int BIO_dump_indent_cb(int (*cb) (const void *data, size_t len, void *u), void *u, const char *s, int len, int indent); int BIO_dump(BIO *b, const char *bytes, int len); int BIO_dump_indent(BIO *b, const char *bytes, int len, int indent); int BIO_dump_fp(FILE *fp, const char *s, int len); int BIO_dump_indent_fp(FILE *fp, const char *s, int len, int indent); struct hostent *BIO_gethostbyname(const char *name); int BIO_sock_error(int sock); int BIO_socket_ioctl(int fd, long type, void *arg); int BIO_socket_nbio(int fd, int mode); int BIO_get_port(const char *str, unsigned short *port_ptr); int BIO_get_host_ip(const char *str, unsigned char *ip); int BIO_get_accept_socket(char *host_port, int mode); int BIO_accept(int sock, char **ip_port); int BIO_sock_init(void); void BIO_sock_cleanup(void); int BIO_set_tcp_ndelay(int sock, int turn_on); BIO *BIO_new_socket(int sock, int close_flag); BIO *BIO_new_dgram(int fd, int close_flag); BIO *BIO_new_fd(int fd, int close_flag); BIO *BIO_new_connect(char *host_port); BIO *BIO_new_accept(char *host_port); int BIO_new_bio_pair(BIO **bio1, size_t writebuf1, BIO **bio2, size_t writebuf2); void BIO_copy_next_retry(BIO *b); int BIO_printf(BIO *bio, const char *format, ...) ; int BIO_vprintf(BIO *bio, const char *format, va_list args) ; int BIO_snprintf(char *buf, size_t n, const char *format, ...) ; int BIO_vsnprintf(char *buf, size_t n, const char *format, va_list args) ; void ERR_load_BIO_strings(void); #line 776 "/usr/include/openssl/bio.h" #line 807 "/usr/include/openssl/bio.h" #line 180 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/x509.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 68 "/usr/include/openssl/x509.h" #line 1 "/usr/include/openssl/symhacks.h" #line 436 "/usr/include/openssl/symhacks.h" #line 69 "/usr/include/openssl/x509.h" #line 1 "/usr/include/openssl/buffer.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef long ptrdiff_t; #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 69 "/usr/include/openssl/buffer.h" struct buf_mem_st { int length; char *data; int max; }; BUF_MEM *BUF_MEM_new(void); void BUF_MEM_free(BUF_MEM *a); int BUF_MEM_grow(BUF_MEM *str, int len); int BUF_MEM_grow_clean(BUF_MEM *str, int len); char *BUF_strdup(const char *str); char *BUF_strndup(const char *str, size_t siz); void *BUF_memdup(const void *data, size_t siz); size_t BUF_strlcpy(char *dst, const char *src, size_t siz); size_t BUF_strlcat(char *dst, const char *src, size_t siz); void ERR_load_BUF_strings(void); #line 111 "/usr/include/openssl/buffer.h" #line 71 "/usr/include/openssl/x509.h" #line 1 "/usr/include/openssl/evp.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 67 "/usr/include/openssl/evp.h" #line 1 "/usr/include/openssl/symhacks.h" #line 436 "/usr/include/openssl/symhacks.h" #line 73 "/usr/include/openssl/evp.h" #line 1 "/usr/include/openssl/objects.h" #line 1 "/usr/include/openssl/obj_mac.h" #line 66 "/usr/include/openssl/objects.h" #line 963 "/usr/include/openssl/objects.h" #line 1 "/usr/include/openssl/asn1.h" #line 1 "/usr/include/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 30 "/usr/include/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 40 "/usr/include/time.h" #line 1 "/usr/include/bits/time.h" #line 43 "/usr/include/bits/time.h" #line 44 "/usr/include/time.h" typedef __clock_t clock_t; #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" #line 129 "/usr/include/time.h" struct tm { int tm_sec; int tm_min; int tm_hour; int tm_mday; int tm_mon; int tm_year; int tm_wday; int tm_yday; int tm_isdst; long int tm_gmtoff; const char *tm_zone; }; struct itimerspec { struct timespec it_interval; struct timespec it_value; }; struct sigevent; #line 179 "/usr/include/time.h" extern clock_t clock (void) ; extern time_t time (time_t *__timer) ; extern double difftime (time_t __time1, time_t __time0) ; extern time_t mktime (struct tm *__tp) ; extern size_t strftime (char * __s, size_t __maxsize, const char * __format, const struct tm * __tp) ; #line 212 "/usr/include/time.h" #line 227 "/usr/include/time.h" extern struct tm *gmtime (const time_t *__timer) ; extern struct tm *localtime (const time_t *__timer) ; extern struct tm *gmtime_r (const time_t * __timer, struct tm * __tp) ; extern struct tm *localtime_r (const time_t * __timer, struct tm * __tp) ; extern char *asctime (const struct tm *__tp) ; extern char *ctime (const time_t *__timer) ; extern char *asctime_r (const struct tm * __tp, char * __buf) ; extern char *ctime_r (const time_t * __timer, char * __buf) ; extern char *__tzname[2]; extern int __daylight; extern long int __timezone; extern char *tzname[2]; extern void tzset (void) ; extern int daylight; extern long int timezone; extern int stime (const time_t *__when) ; extern time_t timegm (struct tm *__tp) ; extern time_t timelocal (struct tm *__tp) ; extern int dysize (int __year) ; extern int nanosleep (const struct timespec *__requested_time, struct timespec *__remaining); extern int clock_getres (clockid_t __clock_id, struct timespec *__res) ; extern int clock_gettime (clockid_t __clock_id, struct timespec *__tp) ; extern int clock_settime (clockid_t __clock_id, const struct timespec *__tp) ; extern int clock_nanosleep (clockid_t __clock_id, int __flags, const struct timespec *__req, struct timespec *__rem); extern int clock_getcpuclockid (pid_t __pid, clockid_t *__clock_id) ; extern int timer_create (clockid_t __clock_id, struct sigevent * __evp, timer_t * __timerid) ; extern int timer_delete (timer_t __timerid) ; extern int timer_settime (timer_t __timerid, int __flags, const struct itimerspec * __value, struct itimerspec * __ovalue) ; extern int timer_gettime (timer_t __timerid, struct itimerspec *__value) ; extern int timer_getoverrun (timer_t __timerid) ; #line 400 "/usr/include/time.h" #line 415 "/usr/include/time.h" #line 63 "/usr/include/openssl/asn1.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 64 "/usr/include/openssl/asn1.h" #line 1 "/usr/include/openssl/symhacks.h" #line 436 "/usr/include/openssl/symhacks.h" #line 71 "/usr/include/openssl/asn1.h" #line 1 "/usr/include/openssl/bn.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 76 "/usr/include/openssl/bn.h" #line 119 "/usr/include/openssl/bn.h" #line 143 "/usr/include/openssl/bn.h" #line 169 "/usr/include/openssl/bn.h" #line 200 "/usr/include/openssl/bn.h" #line 223 "/usr/include/openssl/bn.h" #line 246 "/usr/include/openssl/bn.h" #line 268 "/usr/include/openssl/bn.h" #line 288 "/usr/include/openssl/bn.h" #line 299 "/usr/include/openssl/bn.h" struct bignum_st { unsigned long *d; int top; int dmax; int neg; int flags; }; struct bn_mont_ctx_st { int ri; BIGNUM RR; BIGNUM N; BIGNUM Ni; unsigned long n0; int flags; }; struct bn_recp_ctx_st { BIGNUM N; BIGNUM Nr; int num_bits; int shift; int flags; }; struct bn_gencb_st { unsigned int ver; void *arg; union { void (*cb_1) (int, int, void *); int (*cb_2) (int, int, BN_GENCB *); } cb; }; int BN_GENCB_call(BN_GENCB *cb, int a, int b); #line 387 "/usr/include/openssl/bn.h" #line 397 "/usr/include/openssl/bn.h" #line 410 "/usr/include/openssl/bn.h" const BIGNUM *BN_value_one(void); char *BN_options(void); BN_CTX *BN_CTX_new(void); void BN_CTX_init(BN_CTX *c); void BN_CTX_free(BN_CTX *c); void BN_CTX_start(BN_CTX *ctx); BIGNUM *BN_CTX_get(BN_CTX *ctx); void BN_CTX_end(BN_CTX *ctx); int BN_rand(BIGNUM *rnd, int bits, int top, int bottom); int BN_pseudo_rand(BIGNUM *rnd, int bits, int top, int bottom); int BN_rand_range(BIGNUM *rnd, const BIGNUM *range); int BN_pseudo_rand_range(BIGNUM *rnd, const BIGNUM *range); int BN_num_bits(const BIGNUM *a); int BN_num_bits_word(unsigned long); BIGNUM *BN_new(void); void BN_init(BIGNUM *); void BN_clear_free(BIGNUM *a); BIGNUM *BN_copy(BIGNUM *a, const BIGNUM *b); void BN_swap(BIGNUM *a, BIGNUM *b); BIGNUM *BN_bin2bn(const unsigned char *s, int len, BIGNUM *ret); int BN_bn2bin(const BIGNUM *a, unsigned char *to); BIGNUM *BN_mpi2bn(const unsigned char *s, int len, BIGNUM *ret); int BN_bn2mpi(const BIGNUM *a, unsigned char *to); int BN_sub(BIGNUM *r, const BIGNUM *a, const BIGNUM *b); int BN_usub(BIGNUM *r, const BIGNUM *a, const BIGNUM *b); int BN_uadd(BIGNUM *r, const BIGNUM *a, const BIGNUM *b); int BN_add(BIGNUM *r, const BIGNUM *a, const BIGNUM *b); int BN_mul(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, BN_CTX *ctx); int BN_sqr(BIGNUM *r, const BIGNUM *a, BN_CTX *ctx); void BN_set_negative(BIGNUM *b, int n); int BN_div(BIGNUM *dv, BIGNUM *rem, const BIGNUM *m, const BIGNUM *d, BN_CTX *ctx); int BN_nnmod(BIGNUM *r, const BIGNUM *m, const BIGNUM *d, BN_CTX *ctx); int BN_mod_add(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, const BIGNUM *m, BN_CTX *ctx); int BN_mod_add_quick(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, const BIGNUM *m); int BN_mod_sub(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, const BIGNUM *m, BN_CTX *ctx); int BN_mod_sub_quick(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, const BIGNUM *m); int BN_mod_mul(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, const BIGNUM *m, BN_CTX *ctx); int BN_mod_sqr(BIGNUM *r, const BIGNUM *a, const BIGNUM *m, BN_CTX *ctx); int BN_mod_lshift1(BIGNUM *r, const BIGNUM *a, const BIGNUM *m, BN_CTX *ctx); int BN_mod_lshift1_quick(BIGNUM *r, const BIGNUM *a, const BIGNUM *m); int BN_mod_lshift(BIGNUM *r, const BIGNUM *a, int n, const BIGNUM *m, BN_CTX *ctx); int BN_mod_lshift_quick(BIGNUM *r, const BIGNUM *a, int n, const BIGNUM *m); unsigned long BN_mod_word(const BIGNUM *a, unsigned long w); unsigned long BN_div_word(BIGNUM *a, unsigned long w); int BN_mul_word(BIGNUM *a, unsigned long w); int BN_add_word(BIGNUM *a, unsigned long w); int BN_sub_word(BIGNUM *a, unsigned long w); int BN_set_word(BIGNUM *a, unsigned long w); unsigned long BN_get_word(const BIGNUM *a); int BN_cmp(const BIGNUM *a, const BIGNUM *b); void BN_free(BIGNUM *a); int BN_is_bit_set(const BIGNUM *a, int n); int BN_lshift(BIGNUM *r, const BIGNUM *a, int n); int BN_lshift1(BIGNUM *r, const BIGNUM *a); int BN_exp(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, BN_CTX *ctx); int BN_mod_exp(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, const BIGNUM *m, BN_CTX *ctx); int BN_mod_exp_mont(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, const BIGNUM *m, BN_CTX *ctx, BN_MONT_CTX *m_ctx); int BN_mod_exp_mont_consttime(BIGNUM *rr, const BIGNUM *a, const BIGNUM *p, const BIGNUM *m, BN_CTX *ctx, BN_MONT_CTX *in_mont); int BN_mod_exp_mont_word(BIGNUM *r, unsigned long a, const BIGNUM *p, const BIGNUM *m, BN_CTX *ctx, BN_MONT_CTX *m_ctx); int BN_mod_exp2_mont(BIGNUM *r, const BIGNUM *a1, const BIGNUM *p1, const BIGNUM *a2, const BIGNUM *p2, const BIGNUM *m, BN_CTX *ctx, BN_MONT_CTX *m_ctx); int BN_mod_exp_simple(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, const BIGNUM *m, BN_CTX *ctx); int BN_mask_bits(BIGNUM *a, int n); int BN_print_fp(FILE *fp, const BIGNUM *a); int BN_print(BIO *fp, const BIGNUM *a); int BN_reciprocal(BIGNUM *r, const BIGNUM *m, int len, BN_CTX *ctx); int BN_rshift(BIGNUM *r, const BIGNUM *a, int n); int BN_rshift1(BIGNUM *r, const BIGNUM *a); void BN_clear(BIGNUM *a); BIGNUM *BN_dup(const BIGNUM *a); int BN_ucmp(const BIGNUM *a, const BIGNUM *b); int BN_set_bit(BIGNUM *a, int n); int BN_clear_bit(BIGNUM *a, int n); char *BN_bn2hex(const BIGNUM *a); char *BN_bn2dec(const BIGNUM *a); int BN_hex2bn(BIGNUM **a, const char *str); int BN_dec2bn(BIGNUM **a, const char *str); int BN_gcd(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, BN_CTX *ctx); int BN_kronecker(const BIGNUM *a, const BIGNUM *b, BN_CTX *ctx); BIGNUM *BN_mod_inverse(BIGNUM *ret, const BIGNUM *a, const BIGNUM *n, BN_CTX *ctx); BIGNUM *BN_mod_sqrt(BIGNUM *ret, const BIGNUM *a, const BIGNUM *n, BN_CTX *ctx); void BN_consttime_swap(unsigned long swap, BIGNUM *a, BIGNUM *b, int nwords); BIGNUM *BN_generate_prime(BIGNUM *ret, int bits, int safe, const BIGNUM *add, const BIGNUM *rem, void (*callback) (int, int, void *), void *cb_arg); int BN_is_prime(const BIGNUM *p, int nchecks, void (*callback) (int, int, void *), BN_CTX *ctx, void *cb_arg); int BN_is_prime_fasttest(const BIGNUM *p, int nchecks, void (*callback) (int, int, void *), BN_CTX *ctx, void *cb_arg, int do_trial_division); int BN_generate_prime_ex(BIGNUM *ret, int bits, int safe, const BIGNUM *add, const BIGNUM *rem, BN_GENCB *cb); int BN_is_prime_ex(const BIGNUM *p, int nchecks, BN_CTX *ctx, BN_GENCB *cb); int BN_is_prime_fasttest_ex(const BIGNUM *p, int nchecks, BN_CTX *ctx, int do_trial_division, BN_GENCB *cb); int BN_X931_generate_Xpq(BIGNUM *Xp, BIGNUM *Xq, int nbits, BN_CTX *ctx); int BN_X931_derive_prime_ex(BIGNUM *p, BIGNUM *p1, BIGNUM *p2, const BIGNUM *Xp, const BIGNUM *Xp1, const BIGNUM *Xp2, const BIGNUM *e, BN_CTX *ctx, BN_GENCB *cb); int BN_X931_generate_prime_ex(BIGNUM *p, BIGNUM *p1, BIGNUM *p2, BIGNUM *Xp1, BIGNUM *Xp2, const BIGNUM *Xp, const BIGNUM *e, BN_CTX *ctx, BN_GENCB *cb); BN_MONT_CTX *BN_MONT_CTX_new(void); void BN_MONT_CTX_init(BN_MONT_CTX *ctx); int BN_mod_mul_montgomery(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, BN_MONT_CTX *mont, BN_CTX *ctx); int BN_from_montgomery(BIGNUM *r, const BIGNUM *a, BN_MONT_CTX *mont, BN_CTX *ctx); void BN_MONT_CTX_free(BN_MONT_CTX *mont); int BN_MONT_CTX_set(BN_MONT_CTX *mont, const BIGNUM *mod, BN_CTX *ctx); BN_MONT_CTX *BN_MONT_CTX_copy(BN_MONT_CTX *to, BN_MONT_CTX *from); BN_MONT_CTX *BN_MONT_CTX_set_locked(BN_MONT_CTX **pmont, int lock, const BIGNUM *mod, BN_CTX *ctx); BN_BLINDING *BN_BLINDING_new(const BIGNUM *A, const BIGNUM *Ai, BIGNUM *mod); void BN_BLINDING_free(BN_BLINDING *b); int BN_BLINDING_update(BN_BLINDING *b, BN_CTX *ctx); int BN_BLINDING_convert(BIGNUM *n, BN_BLINDING *b, BN_CTX *ctx); int BN_BLINDING_invert(BIGNUM *n, BN_BLINDING *b, BN_CTX *ctx); int BN_BLINDING_convert_ex(BIGNUM *n, BIGNUM *r, BN_BLINDING *b, BN_CTX *); int BN_BLINDING_invert_ex(BIGNUM *n, const BIGNUM *r, BN_BLINDING *b, BN_CTX *); unsigned long BN_BLINDING_get_thread_id(const BN_BLINDING *); void BN_BLINDING_set_thread_id(BN_BLINDING *, unsigned long); unsigned long BN_BLINDING_get_flags(const BN_BLINDING *); void BN_BLINDING_set_flags(BN_BLINDING *, unsigned long); BN_BLINDING *BN_BLINDING_create_param(BN_BLINDING *b, const BIGNUM *e, BIGNUM *m, BN_CTX *ctx, int (*bn_mod_exp) (BIGNUM *r, const BIGNUM *a, const BIGNUM *p, const BIGNUM *m, BN_CTX *ctx, BN_MONT_CTX *m_ctx), BN_MONT_CTX *m_ctx); void BN_set_params(int mul, int high, int low, int mont); int BN_get_params(int which); void BN_RECP_CTX_init(BN_RECP_CTX *recp); BN_RECP_CTX *BN_RECP_CTX_new(void); void BN_RECP_CTX_free(BN_RECP_CTX *recp); int BN_RECP_CTX_set(BN_RECP_CTX *recp, const BIGNUM *rdiv, BN_CTX *ctx); int BN_mod_mul_reciprocal(BIGNUM *r, const BIGNUM *x, const BIGNUM *y, BN_RECP_CTX *recp, BN_CTX *ctx); int BN_mod_exp_recp(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, const BIGNUM *m, BN_CTX *ctx); int BN_div_recp(BIGNUM *dv, BIGNUM *rem, const BIGNUM *m, BN_RECP_CTX *recp, BN_CTX *ctx); int BN_GF2m_add(BIGNUM *r, const BIGNUM *a, const BIGNUM *b); int BN_GF2m_mod(BIGNUM *r, const BIGNUM *a, const BIGNUM *p); int BN_GF2m_mod_mul(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, const BIGNUM *p, BN_CTX *ctx); int BN_GF2m_mod_sqr(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, BN_CTX *ctx); int BN_GF2m_mod_inv(BIGNUM *r, const BIGNUM *b, const BIGNUM *p, BN_CTX *ctx); int BN_GF2m_mod_div(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, const BIGNUM *p, BN_CTX *ctx); int BN_GF2m_mod_exp(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, const BIGNUM *p, BN_CTX *ctx); int BN_GF2m_mod_sqrt(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, BN_CTX *ctx); int BN_GF2m_mod_solve_quad(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, BN_CTX *ctx); int BN_GF2m_mod_arr(BIGNUM *r, const BIGNUM *a, const unsigned int p[]); int BN_GF2m_mod_mul_arr(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, const unsigned int p[], BN_CTX *ctx); int BN_GF2m_mod_sqr_arr(BIGNUM *r, const BIGNUM *a, const unsigned int p[], BN_CTX *ctx); int BN_GF2m_mod_inv_arr(BIGNUM *r, const BIGNUM *b, const unsigned int p[], BN_CTX *ctx); int BN_GF2m_mod_div_arr(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, const unsigned int p[], BN_CTX *ctx); int BN_GF2m_mod_exp_arr(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, const unsigned int p[], BN_CTX *ctx); int BN_GF2m_mod_sqrt_arr(BIGNUM *r, const BIGNUM *a, const unsigned int p[], BN_CTX *ctx); int BN_GF2m_mod_solve_quad_arr(BIGNUM *r, const BIGNUM *a, const unsigned int p[], BN_CTX *ctx); int BN_GF2m_poly2arr(const BIGNUM *a, unsigned int p[], int max); int BN_GF2m_arr2poly(const unsigned int p[], BIGNUM *a); int BN_nist_mod_192(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, BN_CTX *ctx); int BN_nist_mod_224(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, BN_CTX *ctx); int BN_nist_mod_256(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, BN_CTX *ctx); int BN_nist_mod_384(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, BN_CTX *ctx); int BN_nist_mod_521(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, BN_CTX *ctx); const BIGNUM *BN_get0_nist_prime_192(void); const BIGNUM *BN_get0_nist_prime_224(void); const BIGNUM *BN_get0_nist_prime_256(void); const BIGNUM *BN_get0_nist_prime_384(void); const BIGNUM *BN_get0_nist_prime_521(void); BIGNUM *bn_expand2(BIGNUM *a, int words); BIGNUM *bn_dup_expand(const BIGNUM *a, int words); #line 796 "/usr/include/openssl/bn.h" #line 815 "/usr/include/openssl/bn.h" unsigned long bn_mul_add_words(unsigned long *rp, const unsigned long *ap, int num, unsigned long w); unsigned long bn_mul_words(unsigned long *rp, const unsigned long *ap, int num, unsigned long w); void bn_sqr_words(unsigned long *rp, const unsigned long *ap, int num); unsigned long bn_div_words(unsigned long h, unsigned long l, unsigned long d); unsigned long bn_add_words(unsigned long *rp, const unsigned long *ap, const unsigned long *bp, int num); unsigned long bn_sub_words(unsigned long *rp, const unsigned long *ap, const unsigned long *bp, int num); BIGNUM *get_rfc2409_prime_768(BIGNUM *bn); BIGNUM *get_rfc2409_prime_1024(BIGNUM *bn); BIGNUM *get_rfc3526_prime_1536(BIGNUM *bn); BIGNUM *get_rfc3526_prime_2048(BIGNUM *bn); BIGNUM *get_rfc3526_prime_3072(BIGNUM *bn); BIGNUM *get_rfc3526_prime_4096(BIGNUM *bn); BIGNUM *get_rfc3526_prime_6144(BIGNUM *bn); BIGNUM *get_rfc3526_prime_8192(BIGNUM *bn); int BN_bntest_rand(BIGNUM *rnd, int bits, int top, int bottom); void ERR_load_BN_strings(void); #line 892 "/usr/include/openssl/bn.h" #line 913 "/usr/include/openssl/bn.h" #line 75 "/usr/include/openssl/asn1.h" #line 132 "/usr/include/openssl/asn1.h" #line 152 "/usr/include/openssl/asn1.h" #line 161 "/usr/include/openssl/asn1.h" struct X509_algor_st; typedef struct asn1_ctx_st { unsigned char *p; int eos; int error; int inf; int tag; int xclass; long slen; unsigned char *max; unsigned char *q; unsigned char **pp; int line; } ASN1_CTX; typedef struct asn1_const_ctx_st { const unsigned char *p; int eos; int error; int inf; int tag; int xclass; long slen; const unsigned char *max; const unsigned char *q; const unsigned char **pp; int line; } ASN1_const_CTX; typedef struct asn1_object_st { const char *sn, *ln; int nid; int length; unsigned char *data; int flags; } ASN1_OBJECT; typedef struct asn1_string_st { int length; int type; unsigned char *data; long flags; } ASN1_STRING; typedef struct ASN1_ENCODING_st { unsigned char *enc; long len; int modified; } ASN1_ENCODING; typedef struct asn1_string_table_st { int nid; long minsize; long maxsize; unsigned long mask; unsigned long flags; } ASN1_STRING_TABLE; #line 287 "/usr/include/openssl/asn1.h" typedef struct ASN1_TEMPLATE_st ASN1_TEMPLATE; typedef struct ASN1_ITEM_st ASN1_ITEM; typedef struct ASN1_TLC_st ASN1_TLC; typedef struct ASN1_VALUE_st ASN1_VALUE; #line 349 "/usr/include/openssl/asn1.h" typedef void *d2i_of_void(void * *,const unsigned char * *,long); typedef int i2d_of_void(void *,unsigned char * *); typedef const ASN1_ITEM ASN1_ITEM_EXP; #line 430 "/usr/include/openssl/asn1.h" #line 509 "/usr/include/openssl/asn1.h" typedef struct asn1_type_st { int type; union { char *ptr; ASN1_BOOLEAN boolean; ASN1_STRING *asn1_string; ASN1_OBJECT *object; ASN1_INTEGER *integer; ASN1_ENUMERATED *enumerated; ASN1_BIT_STRING *bit_string; ASN1_OCTET_STRING *octet_string; ASN1_PRINTABLESTRING *printablestring; ASN1_T61STRING *t61string; ASN1_IA5STRING *ia5string; ASN1_GENERALSTRING *generalstring; ASN1_BMPSTRING *bmpstring; ASN1_UNIVERSALSTRING *universalstring; ASN1_UTCTIME *utctime; ASN1_GENERALIZEDTIME *generalizedtime; ASN1_VISIBLESTRING *visiblestring; ASN1_UTF8STRING *utf8string; ASN1_STRING *set; ASN1_STRING *sequence; ASN1_VALUE *asn1_value; } value; } ASN1_TYPE; typedef struct asn1_method_st { i2d_of_void *i2d; d2i_of_void *d2i; void *(*create) (void); void (*destroy) (void *); } ASN1_METHOD; typedef struct asn1_header_st { ASN1_OCTET_STRING *header; void *data; ASN1_METHOD *meth; } ASN1_HEADER; typedef struct BIT_STRING_BITNAME_st { int bitnum; const char *lname; const char *sname; } BIT_STRING_BITNAME; #line 584 "/usr/include/openssl/asn1.h" #line 591 "/usr/include/openssl/asn1.h" #line 598 "/usr/include/openssl/asn1.h" #line 611 "/usr/include/openssl/asn1.h" #line 627 "/usr/include/openssl/asn1.h" #line 634 "/usr/include/openssl/asn1.h" #line 648 "/usr/include/openssl/asn1.h" #line 656 "/usr/include/openssl/asn1.h" #line 664 "/usr/include/openssl/asn1.h" #line 674 "/usr/include/openssl/asn1.h" #line 684 "/usr/include/openssl/asn1.h" #line 696 "/usr/include/openssl/asn1.h" #line 722 "/usr/include/openssl/asn1.h" #line 732 "/usr/include/openssl/asn1.h" #line 742 "/usr/include/openssl/asn1.h" #line 752 "/usr/include/openssl/asn1.h" #line 762 "/usr/include/openssl/asn1.h" ASN1_TYPE *ASN1_TYPE_new(void); void ASN1_TYPE_free(ASN1_TYPE *a); ASN1_TYPE *d2i_ASN1_TYPE(ASN1_TYPE * *a, const unsigned char * *in, long len); int i2d_ASN1_TYPE(ASN1_TYPE *a, unsigned char * *out); extern const ASN1_ITEM ASN1_ANY_it; int ASN1_TYPE_get(ASN1_TYPE *a); void ASN1_TYPE_set(ASN1_TYPE *a, int type, void *value); int ASN1_TYPE_set1(ASN1_TYPE *a, int type, const void *value); int ASN1_TYPE_cmp(const ASN1_TYPE *a, const ASN1_TYPE *b); ASN1_OBJECT *ASN1_OBJECT_new(void); void ASN1_OBJECT_free(ASN1_OBJECT *a); int i2d_ASN1_OBJECT(ASN1_OBJECT *a, unsigned char **pp); ASN1_OBJECT *c2i_ASN1_OBJECT(ASN1_OBJECT **a, const unsigned char **pp, long length); ASN1_OBJECT *d2i_ASN1_OBJECT(ASN1_OBJECT **a, const unsigned char **pp, long length); extern const ASN1_ITEM ASN1_OBJECT_it; ASN1_STRING *ASN1_STRING_new(void); void ASN1_STRING_free(ASN1_STRING *a); ASN1_STRING *ASN1_STRING_dup(ASN1_STRING *a); ASN1_STRING *ASN1_STRING_type_new(int type); int ASN1_STRING_cmp(ASN1_STRING *a, ASN1_STRING *b); int ASN1_STRING_set(ASN1_STRING *str, const void *data, int len); void ASN1_STRING_set0(ASN1_STRING *str, void *data, int len); int ASN1_STRING_length(ASN1_STRING *x); void ASN1_STRING_length_set(ASN1_STRING *x, int n); int ASN1_STRING_type(ASN1_STRING *x); unsigned char *ASN1_STRING_data(ASN1_STRING *x); ASN1_BIT_STRING *ASN1_BIT_STRING_new(void); void ASN1_BIT_STRING_free(ASN1_BIT_STRING *a); ASN1_BIT_STRING *d2i_ASN1_BIT_STRING(ASN1_BIT_STRING * *a, const unsigned char * *in, long len); int i2d_ASN1_BIT_STRING(ASN1_BIT_STRING *a, unsigned char * *out); extern const ASN1_ITEM ASN1_BIT_STRING_it; int i2c_ASN1_BIT_STRING(ASN1_BIT_STRING *a, unsigned char **pp); ASN1_BIT_STRING *c2i_ASN1_BIT_STRING(ASN1_BIT_STRING **a, const unsigned char **pp, long length); int ASN1_BIT_STRING_set(ASN1_BIT_STRING *a, unsigned char *d, int length); int ASN1_BIT_STRING_set_bit(ASN1_BIT_STRING *a, int n, int value); int ASN1_BIT_STRING_get_bit(ASN1_BIT_STRING *a, int n); int ASN1_BIT_STRING_name_print(BIO *out, ASN1_BIT_STRING *bs, BIT_STRING_BITNAME *tbl, int indent); int ASN1_BIT_STRING_num_asc(char *name, BIT_STRING_BITNAME *tbl); int ASN1_BIT_STRING_set_asc(ASN1_BIT_STRING *bs, char *name, int value, BIT_STRING_BITNAME *tbl); int i2d_ASN1_BOOLEAN(int a, unsigned char **pp); int d2i_ASN1_BOOLEAN(int *a, const unsigned char **pp, long length); ASN1_INTEGER *ASN1_INTEGER_new(void); void ASN1_INTEGER_free(ASN1_INTEGER *a); ASN1_INTEGER *d2i_ASN1_INTEGER(ASN1_INTEGER * *a, const unsigned char * *in, long len); int i2d_ASN1_INTEGER(ASN1_INTEGER *a, unsigned char * *out); extern const ASN1_ITEM ASN1_INTEGER_it; int i2c_ASN1_INTEGER(ASN1_INTEGER *a, unsigned char **pp); ASN1_INTEGER *c2i_ASN1_INTEGER(ASN1_INTEGER **a, const unsigned char **pp, long length); ASN1_INTEGER *d2i_ASN1_UINTEGER(ASN1_INTEGER **a, const unsigned char **pp, long length); ASN1_INTEGER *ASN1_INTEGER_dup(ASN1_INTEGER *x); int ASN1_INTEGER_cmp(ASN1_INTEGER *x, ASN1_INTEGER *y); ASN1_ENUMERATED *ASN1_ENUMERATED_new(void); void ASN1_ENUMERATED_free(ASN1_ENUMERATED *a); ASN1_ENUMERATED *d2i_ASN1_ENUMERATED(ASN1_ENUMERATED * *a, const unsigned char * *in, long len); int i2d_ASN1_ENUMERATED(ASN1_ENUMERATED *a, unsigned char * *out); extern const ASN1_ITEM ASN1_ENUMERATED_it; int ASN1_UTCTIME_check(ASN1_UTCTIME *a); ASN1_UTCTIME *ASN1_UTCTIME_set(ASN1_UTCTIME *s, time_t t); int ASN1_UTCTIME_set_string(ASN1_UTCTIME *s, const char *str); int ASN1_UTCTIME_cmp_time_t(const ASN1_UTCTIME *s, time_t t); int ASN1_GENERALIZEDTIME_check(ASN1_GENERALIZEDTIME *a); ASN1_GENERALIZEDTIME *ASN1_GENERALIZEDTIME_set(ASN1_GENERALIZEDTIME *s, time_t t); int ASN1_GENERALIZEDTIME_set_string(ASN1_GENERALIZEDTIME *s, const char *str); ASN1_OCTET_STRING *ASN1_OCTET_STRING_new(void); void ASN1_OCTET_STRING_free(ASN1_OCTET_STRING *a); ASN1_OCTET_STRING *d2i_ASN1_OCTET_STRING(ASN1_OCTET_STRING * *a, const unsigned char * *in, long len); int i2d_ASN1_OCTET_STRING(ASN1_OCTET_STRING *a, unsigned char * *out); extern const ASN1_ITEM ASN1_OCTET_STRING_it; ASN1_OCTET_STRING *ASN1_OCTET_STRING_dup(ASN1_OCTET_STRING *a); int ASN1_OCTET_STRING_cmp(ASN1_OCTET_STRING *a, ASN1_OCTET_STRING *b); int ASN1_OCTET_STRING_set(ASN1_OCTET_STRING *str, const unsigned char *data, int len); ASN1_VISIBLESTRING *ASN1_VISIBLESTRING_new(void); void ASN1_VISIBLESTRING_free(ASN1_VISIBLESTRING *a); ASN1_VISIBLESTRING *d2i_ASN1_VISIBLESTRING(ASN1_VISIBLESTRING * *a, const unsigned char * *in, long len); int i2d_ASN1_VISIBLESTRING(ASN1_VISIBLESTRING *a, unsigned char * *out); extern const ASN1_ITEM ASN1_VISIBLESTRING_it; ASN1_UNIVERSALSTRING *ASN1_UNIVERSALSTRING_new(void); void ASN1_UNIVERSALSTRING_free(ASN1_UNIVERSALSTRING *a); ASN1_UNIVERSALSTRING *d2i_ASN1_UNIVERSALSTRING(ASN1_UNIVERSALSTRING * *a, const unsigned char * *in, long len); int i2d_ASN1_UNIVERSALSTRING(ASN1_UNIVERSALSTRING *a, unsigned char * *out); extern const ASN1_ITEM ASN1_UNIVERSALSTRING_it; ASN1_UTF8STRING *ASN1_UTF8STRING_new(void); void ASN1_UTF8STRING_free(ASN1_UTF8STRING *a); ASN1_UTF8STRING *d2i_ASN1_UTF8STRING(ASN1_UTF8STRING * *a, const unsigned char * *in, long len); int i2d_ASN1_UTF8STRING(ASN1_UTF8STRING *a, unsigned char * *out); extern const ASN1_ITEM ASN1_UTF8STRING_it; ASN1_NULL *ASN1_NULL_new(void); void ASN1_NULL_free(ASN1_NULL *a); ASN1_NULL *d2i_ASN1_NULL(ASN1_NULL * *a, const unsigned char * *in, long len); int i2d_ASN1_NULL(ASN1_NULL *a, unsigned char * *out); extern const ASN1_ITEM ASN1_NULL_it; ASN1_BMPSTRING *ASN1_BMPSTRING_new(void); void ASN1_BMPSTRING_free(ASN1_BMPSTRING *a); ASN1_BMPSTRING *d2i_ASN1_BMPSTRING(ASN1_BMPSTRING * *a, const unsigned char * *in, long len); int i2d_ASN1_BMPSTRING(ASN1_BMPSTRING *a, unsigned char * *out); extern const ASN1_ITEM ASN1_BMPSTRING_it; int UTF8_getc(const unsigned char *str, int len, unsigned long *val); int UTF8_putc(unsigned char *str, int len, unsigned long value); ASN1_STRING *ASN1_PRINTABLE_new(void); void ASN1_PRINTABLE_free(ASN1_STRING *a); ASN1_STRING *d2i_ASN1_PRINTABLE(ASN1_STRING * *a, const unsigned char * *in, long len); int i2d_ASN1_PRINTABLE(ASN1_STRING *a, unsigned char * *out); extern const ASN1_ITEM ASN1_PRINTABLE_it; ASN1_STRING *DIRECTORYSTRING_new(void); void DIRECTORYSTRING_free(ASN1_STRING *a); ASN1_STRING *d2i_DIRECTORYSTRING(ASN1_STRING * *a, const unsigned char * *in, long len); int i2d_DIRECTORYSTRING(ASN1_STRING *a, unsigned char * *out); extern const ASN1_ITEM DIRECTORYSTRING_it; ASN1_STRING *DISPLAYTEXT_new(void); void DISPLAYTEXT_free(ASN1_STRING *a); ASN1_STRING *d2i_DISPLAYTEXT(ASN1_STRING * *a, const unsigned char * *in, long len); int i2d_DISPLAYTEXT(ASN1_STRING *a, unsigned char * *out); extern const ASN1_ITEM DISPLAYTEXT_it; ASN1_PRINTABLESTRING *ASN1_PRINTABLESTRING_new(void); void ASN1_PRINTABLESTRING_free(ASN1_PRINTABLESTRING *a); ASN1_PRINTABLESTRING *d2i_ASN1_PRINTABLESTRING(ASN1_PRINTABLESTRING * *a, const unsigned char * *in, long len); int i2d_ASN1_PRINTABLESTRING(ASN1_PRINTABLESTRING *a, unsigned char * *out); extern const ASN1_ITEM ASN1_PRINTABLESTRING_it; ASN1_T61STRING *ASN1_T61STRING_new(void); void ASN1_T61STRING_free(ASN1_T61STRING *a); ASN1_T61STRING *d2i_ASN1_T61STRING(ASN1_T61STRING * *a, const unsigned char * *in, long len); int i2d_ASN1_T61STRING(ASN1_T61STRING *a, unsigned char * *out); extern const ASN1_ITEM ASN1_T61STRING_it; ASN1_IA5STRING *ASN1_IA5STRING_new(void); void ASN1_IA5STRING_free(ASN1_IA5STRING *a); ASN1_IA5STRING *d2i_ASN1_IA5STRING(ASN1_IA5STRING * *a, const unsigned char * *in, long len); int i2d_ASN1_IA5STRING(ASN1_IA5STRING *a, unsigned char * *out); extern const ASN1_ITEM ASN1_IA5STRING_it; ASN1_GENERALSTRING *ASN1_GENERALSTRING_new(void); void ASN1_GENERALSTRING_free(ASN1_GENERALSTRING *a); ASN1_GENERALSTRING *d2i_ASN1_GENERALSTRING(ASN1_GENERALSTRING * *a, const unsigned char * *in, long len); int i2d_ASN1_GENERALSTRING(ASN1_GENERALSTRING *a, unsigned char * *out); extern const ASN1_ITEM ASN1_GENERALSTRING_it; ASN1_UTCTIME *ASN1_UTCTIME_new(void); void ASN1_UTCTIME_free(ASN1_UTCTIME *a); ASN1_UTCTIME *d2i_ASN1_UTCTIME(ASN1_UTCTIME * *a, const unsigned char * *in, long len); int i2d_ASN1_UTCTIME(ASN1_UTCTIME *a, unsigned char * *out); extern const ASN1_ITEM ASN1_UTCTIME_it; ASN1_GENERALIZEDTIME *ASN1_GENERALIZEDTIME_new(void); void ASN1_GENERALIZEDTIME_free(ASN1_GENERALIZEDTIME *a); ASN1_GENERALIZEDTIME *d2i_ASN1_GENERALIZEDTIME(ASN1_GENERALIZEDTIME * *a, const unsigned char * *in, long len); int i2d_ASN1_GENERALIZEDTIME(ASN1_GENERALIZEDTIME *a, unsigned char * *out); extern const ASN1_ITEM ASN1_GENERALIZEDTIME_it; ASN1_TIME *ASN1_TIME_new(void); void ASN1_TIME_free(ASN1_TIME *a); ASN1_TIME *d2i_ASN1_TIME(ASN1_TIME * *a, const unsigned char * *in, long len); int i2d_ASN1_TIME(ASN1_TIME *a, unsigned char * *out); extern const ASN1_ITEM ASN1_TIME_it; extern const ASN1_ITEM ASN1_OCTET_STRING_NDEF_it; ASN1_TIME *ASN1_TIME_set(ASN1_TIME *s, time_t t); int ASN1_TIME_check(ASN1_TIME *t); ASN1_GENERALIZEDTIME *ASN1_TIME_to_generalizedtime(ASN1_TIME *t, ASN1_GENERALIZEDTIME **out); int i2d_ASN1_SET(STACK * a, unsigned char **pp, i2d_of_void *i2d, int ex_tag, int ex_class, int is_set); STACK *d2i_ASN1_SET(STACK ** a, const unsigned char **pp, long length, d2i_of_void *d2i, void (*free_func) (void *), int ex_tag, int ex_class); int i2a_ASN1_INTEGER(BIO *bp, ASN1_INTEGER *a); int a2i_ASN1_INTEGER(BIO *bp, ASN1_INTEGER *bs, char *buf, int size); int i2a_ASN1_ENUMERATED(BIO *bp, ASN1_ENUMERATED *a); int a2i_ASN1_ENUMERATED(BIO *bp, ASN1_ENUMERATED *bs, char *buf, int size); int i2a_ASN1_OBJECT(BIO *bp, ASN1_OBJECT *a); int a2i_ASN1_STRING(BIO *bp, ASN1_STRING *bs, char *buf, int size); int i2a_ASN1_STRING(BIO *bp, ASN1_STRING *a, int type); int i2t_ASN1_OBJECT(char *buf, int buf_len, ASN1_OBJECT *a); int a2d_ASN1_OBJECT(unsigned char *out, int olen, const char *buf, int num); ASN1_OBJECT *ASN1_OBJECT_create(int nid, unsigned char *data, int len, const char *sn, const char *ln); int ASN1_INTEGER_set(ASN1_INTEGER *a, long v); long ASN1_INTEGER_get(ASN1_INTEGER *a); ASN1_INTEGER *BN_to_ASN1_INTEGER(BIGNUM *bn, ASN1_INTEGER *ai); BIGNUM *ASN1_INTEGER_to_BN(ASN1_INTEGER *ai, BIGNUM *bn); int ASN1_ENUMERATED_set(ASN1_ENUMERATED *a, long v); long ASN1_ENUMERATED_get(ASN1_ENUMERATED *a); ASN1_ENUMERATED *BN_to_ASN1_ENUMERATED(BIGNUM *bn, ASN1_ENUMERATED *ai); BIGNUM *ASN1_ENUMERATED_to_BN(ASN1_ENUMERATED *ai, BIGNUM *bn); int ASN1_PRINTABLE_type(const unsigned char *s, int max); int i2d_ASN1_bytes(ASN1_STRING *a, unsigned char **pp, int tag, int xclass); ASN1_STRING *d2i_ASN1_bytes(ASN1_STRING **a, const unsigned char **pp, long length, int Ptag, int Pclass); unsigned long ASN1_tag2bit(int tag); ASN1_STRING *d2i_ASN1_type_bytes(ASN1_STRING **a, const unsigned char **pp, long length, int type); int asn1_Finish(ASN1_CTX *c); int asn1_const_Finish(ASN1_const_CTX *c); int ASN1_get_object(const unsigned char **pp, long *plength, int *ptag, int *pclass, long omax); int ASN1_check_infinite_end(unsigned char **p, long len); int ASN1_const_check_infinite_end(const unsigned char **p, long len); void ASN1_put_object(unsigned char **pp, int constructed, int length, int tag, int xclass); int ASN1_put_eoc(unsigned char **pp); int ASN1_object_size(int constructed, int length, int tag); void *ASN1_dup(i2d_of_void *i2d, d2i_of_void *d2i, char *x); void *ASN1_item_dup(const ASN1_ITEM *it, void *x); void *ASN1_d2i_fp(void *(*xnew) (void), d2i_of_void *d2i, FILE *in, void **x); void *ASN1_item_d2i_fp(const ASN1_ITEM *it, FILE *in, void *x); int ASN1_i2d_fp(i2d_of_void *i2d, FILE *out, void *x); int ASN1_item_i2d_fp(const ASN1_ITEM *it, FILE *out, void *x); int ASN1_STRING_print_ex_fp(FILE *fp, ASN1_STRING *str, unsigned long flags); int ASN1_STRING_to_UTF8(unsigned char **out, ASN1_STRING *in); void *ASN1_d2i_bio(void *(*xnew) (void), d2i_of_void *d2i, BIO *in, void **x); void *ASN1_item_d2i_bio(const ASN1_ITEM *it, BIO *in, void *x); int ASN1_i2d_bio(i2d_of_void *i2d, BIO *out, unsigned char *x); int ASN1_item_i2d_bio(const ASN1_ITEM *it, BIO *out, void *x); int ASN1_UTCTIME_print(BIO *fp, ASN1_UTCTIME *a); int ASN1_GENERALIZEDTIME_print(BIO *fp, ASN1_GENERALIZEDTIME *a); int ASN1_TIME_print(BIO *fp, ASN1_TIME *a); int ASN1_STRING_print(BIO *bp, ASN1_STRING *v); int ASN1_STRING_print_ex(BIO *out, ASN1_STRING *str, unsigned long flags); int ASN1_parse(BIO *bp, const unsigned char *pp, long len, int indent); int ASN1_parse_dump(BIO *bp, const unsigned char *pp, long len, int indent, int dump); const char *ASN1_tag2str(int tag); int i2d_ASN1_HEADER(ASN1_HEADER * a, unsigned char **pp); ASN1_HEADER *d2i_ASN1_HEADER(ASN1_HEADER ** a, const unsigned char **pp, long length); ASN1_HEADER *ASN1_HEADER_new(void); void ASN1_HEADER_free(ASN1_HEADER * a); int ASN1_UNIVERSALSTRING_to_string(ASN1_UNIVERSALSTRING *s); ASN1_METHOD *X509_asn1_meth(void); ASN1_METHOD *RSAPrivateKey_asn1_meth(void); ASN1_METHOD *ASN1_IA5STRING_asn1_meth(void); ASN1_METHOD *ASN1_BIT_STRING_asn1_meth(void); int ASN1_TYPE_set_octetstring(ASN1_TYPE *a, unsigned char *data, int len); int ASN1_TYPE_get_octetstring(ASN1_TYPE *a, unsigned char *data, int max_len); int ASN1_TYPE_set_int_octetstring(ASN1_TYPE *a, long num, unsigned char *data, int len); int ASN1_TYPE_get_int_octetstring(ASN1_TYPE *a, long *num, unsigned char *data, int max_len); STACK *ASN1_seq_unpack(const unsigned char *buf, int len, d2i_of_void *d2i, void (*free_func) (void *)); unsigned char *ASN1_seq_pack(STACK * safes, i2d_of_void *i2d, unsigned char **buf, int *len); void *ASN1_unpack_string(ASN1_STRING *oct, d2i_of_void *d2i); void *ASN1_item_unpack(ASN1_STRING *oct, const ASN1_ITEM *it); ASN1_STRING *ASN1_pack_string(void *obj, i2d_of_void *i2d, ASN1_OCTET_STRING **oct); ASN1_STRING *ASN1_item_pack(void *obj, const ASN1_ITEM *it, ASN1_OCTET_STRING **oct); void ASN1_STRING_set_default_mask(unsigned long mask); int ASN1_STRING_set_default_mask_asc(const char *p); unsigned long ASN1_STRING_get_default_mask(void); int ASN1_mbstring_copy(ASN1_STRING **out, const unsigned char *in, int len, int inform, unsigned long mask); int ASN1_mbstring_ncopy(ASN1_STRING **out, const unsigned char *in, int len, int inform, unsigned long mask, long minsize, long maxsize); ASN1_STRING *ASN1_STRING_set_by_NID(ASN1_STRING **out, const unsigned char *in, int inlen, int inform, int nid); ASN1_STRING_TABLE *ASN1_STRING_TABLE_get(int nid); int ASN1_STRING_TABLE_add(int, long, long, unsigned long, unsigned long); void ASN1_STRING_TABLE_cleanup(void); ASN1_VALUE *ASN1_item_new(const ASN1_ITEM *it); void ASN1_item_free(ASN1_VALUE *val, const ASN1_ITEM *it); ASN1_VALUE *ASN1_item_d2i(ASN1_VALUE **val, const unsigned char **in, long len, const ASN1_ITEM *it); int ASN1_item_i2d(ASN1_VALUE *val, unsigned char **out, const ASN1_ITEM *it); int ASN1_item_ndef_i2d(ASN1_VALUE *val, unsigned char **out, const ASN1_ITEM *it); void ASN1_add_oid_module(void); ASN1_TYPE *ASN1_generate_nconf(char *str, CONF *nconf); ASN1_TYPE *ASN1_generate_v3(char *str, X509V3_CTX *cnf); typedef int asn1_output_data_fn(BIO *out, BIO *data, ASN1_VALUE *val, int flags, const ASN1_ITEM *it); int int_smime_write_ASN1(BIO *bio, ASN1_VALUE *val, BIO *data, int flags, int ctype_nid, int econt_nid, STACK *mdalgs, asn1_output_data_fn * data_fn, const ASN1_ITEM *it); ASN1_VALUE *SMIME_read_ASN1(BIO *bio, BIO **bcont, const ASN1_ITEM *it); void ERR_load_ASN1_strings(void); #line 1222 "/usr/include/openssl/asn1.h" #line 1339 "/usr/include/openssl/asn1.h" #line 966 "/usr/include/openssl/objects.h" #line 973 "/usr/include/openssl/objects.h" typedef struct obj_name_st { int type; int alias; const char *name; const char *data; } OBJ_NAME; int OBJ_NAME_init(void); int OBJ_NAME_new_index(unsigned long (*hash_func) (const char *), int (*cmp_func) (const char *, const char *), void (*free_func) (const char *, int, const char *)); const char *OBJ_NAME_get(const char *name, int type); int OBJ_NAME_add(const char *name, int type, const char *data); int OBJ_NAME_remove(const char *name, int type); void OBJ_NAME_cleanup(int type); void OBJ_NAME_do_all(int type, void (*fn) (const OBJ_NAME *, void *arg), void *arg); void OBJ_NAME_do_all_sorted(int type, void (*fn) (const OBJ_NAME *, void *arg), void *arg); ASN1_OBJECT *OBJ_dup(const ASN1_OBJECT *o); ASN1_OBJECT *OBJ_nid2obj(int n); const char *OBJ_nid2ln(int n); const char *OBJ_nid2sn(int n); int OBJ_obj2nid(const ASN1_OBJECT *o); ASN1_OBJECT *OBJ_txt2obj(const char *s, int no_name); int OBJ_obj2txt(char *buf, int buf_len, const ASN1_OBJECT *a, int no_name); int OBJ_txt2nid(const char *s); int OBJ_ln2nid(const char *s); int OBJ_sn2nid(const char *s); int OBJ_cmp(const ASN1_OBJECT *a, const ASN1_OBJECT *b); const char *OBJ_bsearch(const char *key, const char *base, int num, int size, int (*cmp) (const void *, const void *)); const char *OBJ_bsearch_ex(const char *key, const char *base, int num, int size, int (*cmp) (const void *, const void *), int flags); int OBJ_new_nid(int num); int OBJ_add_object(const ASN1_OBJECT *obj); int OBJ_create(const char *oid, const char *sn, const char *ln); void OBJ_cleanup(void); int OBJ_create_objects(BIO *in); void ERR_load_OBJ_strings(void); #line 1047 "/usr/include/openssl/objects.h" #line 99 "/usr/include/openssl/evp.h" #line 111 "/usr/include/openssl/evp.h" #line 122 "/usr/include/openssl/evp.h" struct evp_pkey_st { int type; int save_type; int references; union { char *ptr; struct rsa_st *rsa; struct dsa_st *dsa; struct dh_st *dh; } pkey; int save_parameters; STACK *attributes; } ; #line 219 "/usr/include/openssl/evp.h" struct env_md_st { int type; int pkey_type; int md_size; unsigned long flags; int (*init) (EVP_MD_CTX *ctx); int (*update) (EVP_MD_CTX *ctx, const void *data, size_t count); int (*final) (EVP_MD_CTX *ctx, unsigned char *md); int (*copy) (EVP_MD_CTX *to, const EVP_MD_CTX *from); int (*cleanup) (EVP_MD_CTX *ctx); int (*sign) (int type, const unsigned char *m, unsigned int m_length, unsigned char *sigret, unsigned int *siglen, void *key); int (*verify) (int type, const unsigned char *m, unsigned int m_length, const unsigned char *sigbuf, unsigned int siglen, void *key); int required_pkey_type[5]; int block_size; int ctx_size; } ; typedef int evp_sign_method(int type, const unsigned char *m, unsigned int m_length, unsigned char *sigret, unsigned int *siglen, void *key); typedef int evp_verify_method(int type, const unsigned char *m, unsigned int m_length, const unsigned char *sigbuf, unsigned int siglen, void *key); typedef struct { EVP_MD_CTX *mctx; void *key; } EVP_MD_SVCTX; #line 274 "/usr/include/openssl/evp.h" #line 288 "/usr/include/openssl/evp.h" struct env_md_ctx_st { const EVP_MD *digest; ENGINE *engine; unsigned long flags; void *md_data; } ; #line 309 "/usr/include/openssl/evp.h" #line 318 "/usr/include/openssl/evp.h" struct evp_cipher_st { int nid; int block_size; int key_len; int iv_len; unsigned long flags; int (*init) (EVP_CIPHER_CTX *ctx, const unsigned char *key, const unsigned char *iv, int enc); int (*do_cipher) (EVP_CIPHER_CTX *ctx, unsigned char *out, const unsigned char *in, unsigned int inl); int (*cleanup) (EVP_CIPHER_CTX *); int ctx_size; int (*set_asn1_parameters) (EVP_CIPHER_CTX *, ASN1_TYPE *); int (*get_asn1_parameters) (EVP_CIPHER_CTX *, ASN1_TYPE *); int (*ctrl) (EVP_CIPHER_CTX *, int type, int arg, void *ptr); void *app_data; } ; #line 357 "/usr/include/openssl/evp.h" #line 389 "/usr/include/openssl/evp.h" typedef struct evp_cipher_info_st { const EVP_CIPHER *cipher; unsigned char iv[16]; } EVP_CIPHER_INFO; struct evp_cipher_ctx_st { const EVP_CIPHER *cipher; ENGINE *engine; int encrypt; int buf_len; unsigned char oiv[16]; unsigned char iv[16]; unsigned char buf[32]; int num; void *app_data; int key_len; unsigned long flags; void *cipher_data; int final_used; int block_mask; unsigned char final[32]; } ; typedef struct evp_Encode_Ctx_st { int num; int length; unsigned char enc_data[80]; int line_num; int expect_nl; } EVP_ENCODE_CTX; typedef int (EVP_PBE_KEYGEN) (EVP_CIPHER_CTX *ctx, const char *pass, int passlen, ASN1_TYPE *param, const EVP_CIPHER *cipher, const EVP_MD *md, int en_de); #line 467 "/usr/include/openssl/evp.h" int EVP_MD_type(const EVP_MD *md); int EVP_MD_pkey_type(const EVP_MD *md); int EVP_MD_size(const EVP_MD *md); int EVP_MD_block_size(const EVP_MD *md); const EVP_MD *EVP_MD_CTX_md(const EVP_MD_CTX *ctx); int EVP_CIPHER_nid(const EVP_CIPHER *cipher); int EVP_CIPHER_block_size(const EVP_CIPHER *cipher); int EVP_CIPHER_key_length(const EVP_CIPHER *cipher); int EVP_CIPHER_iv_length(const EVP_CIPHER *cipher); unsigned long EVP_CIPHER_flags(const EVP_CIPHER *cipher); const EVP_CIPHER *EVP_CIPHER_CTX_cipher(const EVP_CIPHER_CTX *ctx); int EVP_CIPHER_CTX_nid(const EVP_CIPHER_CTX *ctx); int EVP_CIPHER_CTX_block_size(const EVP_CIPHER_CTX *ctx); int EVP_CIPHER_CTX_key_length(const EVP_CIPHER_CTX *ctx); int EVP_CIPHER_CTX_iv_length(const EVP_CIPHER_CTX *ctx); void *EVP_CIPHER_CTX_get_app_data(const EVP_CIPHER_CTX *ctx); void EVP_CIPHER_CTX_set_app_data(EVP_CIPHER_CTX *ctx, void *data); unsigned long EVP_CIPHER_CTX_flags(const EVP_CIPHER_CTX *ctx); #line 512 "/usr/include/openssl/evp.h" #line 523 "/usr/include/openssl/evp.h" int EVP_Cipher(EVP_CIPHER_CTX *c, unsigned char *out, const unsigned char *in, unsigned int inl); #line 535 "/usr/include/openssl/evp.h" void EVP_MD_CTX_init(EVP_MD_CTX *ctx); int EVP_MD_CTX_cleanup(EVP_MD_CTX *ctx); EVP_MD_CTX *EVP_MD_CTX_create(void); void EVP_MD_CTX_destroy(EVP_MD_CTX *ctx); int EVP_MD_CTX_copy_ex(EVP_MD_CTX *out, const EVP_MD_CTX *in); void EVP_MD_CTX_set_flags(EVP_MD_CTX *ctx, int flags); void EVP_MD_CTX_clear_flags(EVP_MD_CTX *ctx, int flags); int EVP_MD_CTX_test_flags(const EVP_MD_CTX *ctx, int flags); int EVP_DigestInit_ex(EVP_MD_CTX *ctx, const EVP_MD *type, ENGINE *impl); int EVP_DigestUpdate(EVP_MD_CTX *ctx, const void *d, size_t cnt); int EVP_DigestFinal_ex(EVP_MD_CTX *ctx, unsigned char *md, unsigned int *s); int EVP_Digest(const void *data, size_t count, unsigned char *md, unsigned int *size, const EVP_MD *type, ENGINE *impl); int EVP_MD_CTX_copy(EVP_MD_CTX *out, const EVP_MD_CTX *in); int EVP_DigestInit(EVP_MD_CTX *ctx, const EVP_MD *type); int EVP_DigestFinal(EVP_MD_CTX *ctx, unsigned char *md, unsigned int *s); int EVP_read_pw_string(char *buf, int length, const char *prompt, int verify); void EVP_set_pw_prompt(const char *prompt); char *EVP_get_pw_prompt(void); int EVP_BytesToKey(const EVP_CIPHER *type, const EVP_MD *md, const unsigned char *salt, const unsigned char *data, int datal, int count, unsigned char *key, unsigned char *iv); void EVP_CIPHER_CTX_set_flags(EVP_CIPHER_CTX *ctx, int flags); void EVP_CIPHER_CTX_clear_flags(EVP_CIPHER_CTX *ctx, int flags); int EVP_CIPHER_CTX_test_flags(const EVP_CIPHER_CTX *ctx, int flags); int EVP_EncryptInit(EVP_CIPHER_CTX *ctx, const EVP_CIPHER *cipher, const unsigned char *key, const unsigned char *iv); int EVP_EncryptInit_ex(EVP_CIPHER_CTX *ctx, const EVP_CIPHER *cipher, ENGINE *impl, const unsigned char *key, const unsigned char *iv); int EVP_EncryptUpdate(EVP_CIPHER_CTX *ctx, unsigned char *out, int *outl, const unsigned char *in, int inl); int EVP_EncryptFinal_ex(EVP_CIPHER_CTX *ctx, unsigned char *out, int *outl); int EVP_EncryptFinal(EVP_CIPHER_CTX *ctx, unsigned char *out, int *outl); int EVP_DecryptInit(EVP_CIPHER_CTX *ctx, const EVP_CIPHER *cipher, const unsigned char *key, const unsigned char *iv); int EVP_DecryptInit_ex(EVP_CIPHER_CTX *ctx, const EVP_CIPHER *cipher, ENGINE *impl, const unsigned char *key, const unsigned char *iv); int EVP_DecryptUpdate(EVP_CIPHER_CTX *ctx, unsigned char *out, int *outl, const unsigned char *in, int inl); int EVP_DecryptFinal(EVP_CIPHER_CTX *ctx, unsigned char *outm, int *outl); int EVP_DecryptFinal_ex(EVP_CIPHER_CTX *ctx, unsigned char *outm, int *outl); int EVP_CipherInit(EVP_CIPHER_CTX *ctx, const EVP_CIPHER *cipher, const unsigned char *key, const unsigned char *iv, int enc); int EVP_CipherInit_ex(EVP_CIPHER_CTX *ctx, const EVP_CIPHER *cipher, ENGINE *impl, const unsigned char *key, const unsigned char *iv, int enc); int EVP_CipherUpdate(EVP_CIPHER_CTX *ctx, unsigned char *out, int *outl, const unsigned char *in, int inl); int EVP_CipherFinal(EVP_CIPHER_CTX *ctx, unsigned char *outm, int *outl); int EVP_CipherFinal_ex(EVP_CIPHER_CTX *ctx, unsigned char *outm, int *outl); int EVP_SignFinal(EVP_MD_CTX *ctx, unsigned char *md, unsigned int *s, EVP_PKEY *pkey); int EVP_VerifyFinal(EVP_MD_CTX *ctx, const unsigned char *sigbuf, unsigned int siglen, EVP_PKEY *pkey); int EVP_OpenInit(EVP_CIPHER_CTX *ctx, const EVP_CIPHER *type, const unsigned char *ek, int ekl, const unsigned char *iv, EVP_PKEY *priv); int EVP_OpenFinal(EVP_CIPHER_CTX *ctx, unsigned char *out, int *outl); int EVP_SealInit(EVP_CIPHER_CTX *ctx, const EVP_CIPHER *type, unsigned char **ek, int *ekl, unsigned char *iv, EVP_PKEY **pubk, int npubk); int EVP_SealFinal(EVP_CIPHER_CTX *ctx, unsigned char *out, int *outl); void EVP_EncodeInit(EVP_ENCODE_CTX *ctx); void EVP_EncodeUpdate(EVP_ENCODE_CTX *ctx, unsigned char *out, int *outl, const unsigned char *in, int inl); void EVP_EncodeFinal(EVP_ENCODE_CTX *ctx, unsigned char *out, int *outl); int EVP_EncodeBlock(unsigned char *t, const unsigned char *f, int n); void EVP_DecodeInit(EVP_ENCODE_CTX *ctx); int EVP_DecodeUpdate(EVP_ENCODE_CTX *ctx, unsigned char *out, int *outl, const unsigned char *in, int inl); int EVP_DecodeFinal(EVP_ENCODE_CTX *ctx, unsigned char *out, int *outl); int EVP_DecodeBlock(unsigned char *t, const unsigned char *f, int n); void EVP_CIPHER_CTX_init(EVP_CIPHER_CTX *a); int EVP_CIPHER_CTX_cleanup(EVP_CIPHER_CTX *a); EVP_CIPHER_CTX *EVP_CIPHER_CTX_new(void); void EVP_CIPHER_CTX_free(EVP_CIPHER_CTX *a); int EVP_CIPHER_CTX_set_key_length(EVP_CIPHER_CTX *x, int keylen); int EVP_CIPHER_CTX_set_padding(EVP_CIPHER_CTX *c, int pad); int EVP_CIPHER_CTX_ctrl(EVP_CIPHER_CTX *ctx, int type, int arg, void *ptr); int EVP_CIPHER_CTX_rand_key(EVP_CIPHER_CTX *ctx, unsigned char *key); BIO_METHOD *BIO_f_md(void); BIO_METHOD *BIO_f_base64(void); BIO_METHOD *BIO_f_cipher(void); BIO_METHOD *BIO_f_reliable(void); void BIO_set_cipher(BIO *b, const EVP_CIPHER *c, const unsigned char *k, const unsigned char *i, int enc); const EVP_MD *EVP_md_null(void); const EVP_MD *EVP_md2(void); const EVP_MD *EVP_md4(void); const EVP_MD *EVP_md5(void); const EVP_MD *EVP_sha(void); const EVP_MD *EVP_sha1(void); const EVP_MD *EVP_dss(void); const EVP_MD *EVP_dss1(void); const EVP_MD *EVP_ecdsa(void); const EVP_MD *EVP_sha224(void); const EVP_MD *EVP_sha256(void); const EVP_MD *EVP_sha384(void); const EVP_MD *EVP_sha512(void); const EVP_MD *EVP_ripemd160(void); const EVP_CIPHER *EVP_enc_null(void); const EVP_CIPHER *EVP_des_ecb(void); const EVP_CIPHER *EVP_des_ede(void); const EVP_CIPHER *EVP_des_ede3(void); const EVP_CIPHER *EVP_des_ede_ecb(void); const EVP_CIPHER *EVP_des_ede3_ecb(void); const EVP_CIPHER *EVP_des_cfb64(void); const EVP_CIPHER *EVP_des_cfb1(void); const EVP_CIPHER *EVP_des_cfb8(void); const EVP_CIPHER *EVP_des_ede_cfb64(void); const EVP_CIPHER *EVP_des_ede3_cfb64(void); const EVP_CIPHER *EVP_des_ede3_cfb1(void); const EVP_CIPHER *EVP_des_ede3_cfb8(void); const EVP_CIPHER *EVP_des_ofb(void); const EVP_CIPHER *EVP_des_ede_ofb(void); const EVP_CIPHER *EVP_des_ede3_ofb(void); const EVP_CIPHER *EVP_des_cbc(void); const EVP_CIPHER *EVP_des_ede_cbc(void); const EVP_CIPHER *EVP_des_ede3_cbc(void); const EVP_CIPHER *EVP_desx_cbc(void); #line 716 "/usr/include/openssl/evp.h" const EVP_CIPHER *EVP_rc4(void); const EVP_CIPHER *EVP_rc4_40(void); const EVP_CIPHER *EVP_rc2_ecb(void); const EVP_CIPHER *EVP_rc2_cbc(void); const EVP_CIPHER *EVP_rc2_40_cbc(void); const EVP_CIPHER *EVP_rc2_64_cbc(void); const EVP_CIPHER *EVP_rc2_cfb64(void); const EVP_CIPHER *EVP_rc2_ofb(void); const EVP_CIPHER *EVP_bf_ecb(void); const EVP_CIPHER *EVP_bf_cbc(void); const EVP_CIPHER *EVP_bf_cfb64(void); const EVP_CIPHER *EVP_bf_ofb(void); const EVP_CIPHER *EVP_cast5_ecb(void); const EVP_CIPHER *EVP_cast5_cbc(void); const EVP_CIPHER *EVP_cast5_cfb64(void); const EVP_CIPHER *EVP_cast5_ofb(void); const EVP_CIPHER *EVP_aes_128_ecb(void); const EVP_CIPHER *EVP_aes_128_cbc(void); const EVP_CIPHER *EVP_aes_128_cfb1(void); const EVP_CIPHER *EVP_aes_128_cfb8(void); const EVP_CIPHER *EVP_aes_128_cfb128(void); const EVP_CIPHER *EVP_aes_128_ofb(void); const EVP_CIPHER *EVP_aes_192_ecb(void); const EVP_CIPHER *EVP_aes_192_cbc(void); const EVP_CIPHER *EVP_aes_192_cfb1(void); const EVP_CIPHER *EVP_aes_192_cfb8(void); const EVP_CIPHER *EVP_aes_192_cfb128(void); const EVP_CIPHER *EVP_aes_192_ofb(void); const EVP_CIPHER *EVP_aes_256_ecb(void); const EVP_CIPHER *EVP_aes_256_cbc(void); const EVP_CIPHER *EVP_aes_256_cfb1(void); const EVP_CIPHER *EVP_aes_256_cfb8(void); const EVP_CIPHER *EVP_aes_256_cfb128(void); const EVP_CIPHER *EVP_aes_256_ofb(void); #line 797 "/usr/include/openssl/evp.h" #line 805 "/usr/include/openssl/evp.h" void OPENSSL_add_all_algorithms_noconf(void); void OPENSSL_add_all_algorithms_conf(void); #line 816 "/usr/include/openssl/evp.h" void OpenSSL_add_all_ciphers(void); void OpenSSL_add_all_digests(void); int EVP_add_cipher(const EVP_CIPHER *cipher); int EVP_add_digest(const EVP_MD *digest); const EVP_CIPHER *EVP_get_cipherbyname(const char *name); const EVP_MD *EVP_get_digestbyname(const char *name); void EVP_cleanup(void); int EVP_PKEY_decrypt(unsigned char *dec_key, const unsigned char *enc_key, int enc_key_len, EVP_PKEY *private_key); int EVP_PKEY_encrypt(unsigned char *enc_key, const unsigned char *key, int key_len, EVP_PKEY *pub_key); int EVP_PKEY_type(int type); int EVP_PKEY_bits(EVP_PKEY *pkey); int EVP_PKEY_size(EVP_PKEY *pkey); int EVP_PKEY_assign(EVP_PKEY *pkey, int type, char *key); struct rsa_st; int EVP_PKEY_set1_RSA(EVP_PKEY *pkey, struct rsa_st *key); struct rsa_st *EVP_PKEY_get1_RSA(EVP_PKEY *pkey); struct dsa_st; int EVP_PKEY_set1_DSA(EVP_PKEY *pkey, struct dsa_st *key); struct dsa_st *EVP_PKEY_get1_DSA(EVP_PKEY *pkey); struct dh_st; int EVP_PKEY_set1_DH(EVP_PKEY *pkey, struct dh_st *key); struct dh_st *EVP_PKEY_get1_DH(EVP_PKEY *pkey); EVP_PKEY *EVP_PKEY_new(void); void EVP_PKEY_free(EVP_PKEY *pkey); EVP_PKEY *d2i_PublicKey(int type, EVP_PKEY **a, const unsigned char **pp, long length); int i2d_PublicKey(EVP_PKEY *a, unsigned char **pp); EVP_PKEY *d2i_PrivateKey(int type, EVP_PKEY **a, const unsigned char **pp, long length); EVP_PKEY *d2i_AutoPrivateKey(EVP_PKEY **a, const unsigned char **pp, long length); int i2d_PrivateKey(EVP_PKEY *a, unsigned char **pp); int EVP_PKEY_copy_parameters(EVP_PKEY *to, const EVP_PKEY *from); int EVP_PKEY_missing_parameters(const EVP_PKEY *pkey); int EVP_PKEY_save_parameters(EVP_PKEY *pkey, int mode); int EVP_PKEY_cmp_parameters(const EVP_PKEY *a, const EVP_PKEY *b); int EVP_PKEY_cmp(const EVP_PKEY *a, const EVP_PKEY *b); int EVP_CIPHER_type(const EVP_CIPHER *ctx); int EVP_CIPHER_param_to_asn1(EVP_CIPHER_CTX *c, ASN1_TYPE *type); int EVP_CIPHER_asn1_to_param(EVP_CIPHER_CTX *c, ASN1_TYPE *type); int EVP_CIPHER_set_asn1_iv(EVP_CIPHER_CTX *c, ASN1_TYPE *type); int EVP_CIPHER_get_asn1_iv(EVP_CIPHER_CTX *c, ASN1_TYPE *type); int PKCS5_PBE_keyivgen(EVP_CIPHER_CTX *ctx, const char *pass, int passlen, ASN1_TYPE *param, const EVP_CIPHER *cipher, const EVP_MD *md, int en_de); int PKCS5_PBKDF2_HMAC_SHA1(const char *pass, int passlen, const unsigned char *salt, int saltlen, int iter, int keylen, unsigned char *out); int PKCS5_v2_PBE_keyivgen(EVP_CIPHER_CTX *ctx, const char *pass, int passlen, ASN1_TYPE *param, const EVP_CIPHER *cipher, const EVP_MD *md, int en_de); void PKCS5_PBE_add(void); int EVP_PBE_CipherInit(ASN1_OBJECT *pbe_obj, const char *pass, int passlen, ASN1_TYPE *param, EVP_CIPHER_CTX *ctx, int en_de); int EVP_PBE_alg_add(int nid, const EVP_CIPHER *cipher, const EVP_MD *md, EVP_PBE_KEYGEN *keygen); void EVP_PBE_cleanup(void); #line 922 "/usr/include/openssl/evp.h" void EVP_add_alg_module(void); void ERR_load_EVP_strings(void); #line 978 "/usr/include/openssl/evp.h" #line 1032 "/usr/include/openssl/evp.h" #line 74 "/usr/include/openssl/x509.h" #line 81 "/usr/include/openssl/x509.h" #line 1 "/usr/include/openssl/rsa.h" #line 72 "/usr/include/openssl/rsa.h" struct rsa_meth_st { const char *name; int (*rsa_pub_enc) (int flen, const unsigned char *from, unsigned char *to, RSA *rsa, int padding); int (*rsa_pub_dec) (int flen, const unsigned char *from, unsigned char *to, RSA *rsa, int padding); int (*rsa_priv_enc) (int flen, const unsigned char *from, unsigned char *to, RSA *rsa, int padding); int (*rsa_priv_dec) (int flen, const unsigned char *from, unsigned char *to, RSA *rsa, int padding); int (*rsa_mod_exp) (BIGNUM *r0, const BIGNUM *I, RSA *rsa, BN_CTX *ctx); int (*bn_mod_exp) (BIGNUM *r, const BIGNUM *a, const BIGNUM *p, const BIGNUM *m, BN_CTX *ctx, BN_MONT_CTX *m_ctx); int (*init) (RSA *rsa); int (*finish) (RSA *rsa); int flags; char *app_data; int (*rsa_sign) (int type, const unsigned char *m, unsigned int m_length, unsigned char *sigret, unsigned int *siglen, const RSA *rsa); int (*rsa_verify) (int dtype, const unsigned char *m, unsigned int m_length, unsigned char *sigbuf, unsigned int siglen, const RSA *rsa); int (*rsa_keygen) (RSA *rsa, int bits, BIGNUM *e, BN_GENCB *cb); }; struct rsa_st { int pad; long version; const RSA_METHOD *meth; ENGINE *engine; BIGNUM *n; BIGNUM *e; BIGNUM *d; BIGNUM *p; BIGNUM *q; BIGNUM *dmp1; BIGNUM *dmq1; BIGNUM *iqmp; CRYPTO_EX_DATA ex_data; int references; int flags; BN_MONT_CTX *_method_mod_n; BN_MONT_CTX *_method_mod_p; BN_MONT_CTX *_method_mod_q; char *bignum_data; BN_BLINDING *blinding; BN_BLINDING *mt_blinding; }; #line 258 "/usr/include/openssl/rsa.h" RSA *RSA_new(void); RSA *RSA_new_method(ENGINE *engine); int RSA_size(const RSA *); RSA *RSA_generate_key(int bits, unsigned long e, void (*callback) (int, int, void *), void *cb_arg); int RSA_generate_key_ex(RSA *rsa, int bits, BIGNUM *e, BN_GENCB *cb); int RSA_X931_derive_ex(RSA *rsa, BIGNUM *p1, BIGNUM *p2, BIGNUM *q1, BIGNUM *q2, const BIGNUM *Xp1, const BIGNUM *Xp2, const BIGNUM *Xp, const BIGNUM *Xq1, const BIGNUM *Xq2, const BIGNUM *Xq, const BIGNUM *e, BN_GENCB *cb); int RSA_X931_generate_key_ex(RSA *rsa, int bits, const BIGNUM *e, BN_GENCB *cb); int RSA_check_key(const RSA *); int RSA_public_encrypt(int flen, const unsigned char *from, unsigned char *to, RSA *rsa, int padding); int RSA_private_encrypt(int flen, const unsigned char *from, unsigned char *to, RSA *rsa, int padding); int RSA_public_decrypt(int flen, const unsigned char *from, unsigned char *to, RSA *rsa, int padding); int RSA_private_decrypt(int flen, const unsigned char *from, unsigned char *to, RSA *rsa, int padding); void RSA_free(RSA *r); int RSA_up_ref(RSA *r); int RSA_flags(const RSA *r); void RSA_set_default_method(const RSA_METHOD *meth); const RSA_METHOD *RSA_get_default_method(void); const RSA_METHOD *RSA_get_method(const RSA *rsa); int RSA_set_method(RSA *rsa, const RSA_METHOD *meth); int RSA_memory_lock(RSA *r); const RSA_METHOD *RSA_PKCS1_SSLeay(void); const RSA_METHOD *RSA_null_method(void); RSA *d2i_RSAPublicKey(RSA * *a, const unsigned char * *in, long len); int i2d_RSAPublicKey(const RSA *a, unsigned char * *out); extern const ASN1_ITEM RSAPublicKey_it; RSA *d2i_RSAPrivateKey(RSA * *a, const unsigned char * *in, long len); int i2d_RSAPrivateKey(const RSA *a, unsigned char * *out); extern const ASN1_ITEM RSAPrivateKey_it; int RSA_print_fp(FILE *fp, const RSA *r, int offset); int RSA_print(BIO *bp, const RSA *r, int offset); int i2d_RSA_NET(const RSA *a, unsigned char **pp, int (*cb) (char *buf, int len, const char *prompt, int verify), int sgckey); RSA *d2i_RSA_NET(RSA **a, const unsigned char **pp, long length, int (*cb) (char *buf, int len, const char *prompt, int verify), int sgckey); int i2d_Netscape_RSA(const RSA *a, unsigned char **pp, int (*cb) (char *buf, int len, const char *prompt, int verify)); RSA *d2i_Netscape_RSA(RSA **a, const unsigned char **pp, long length, int (*cb) (char *buf, int len, const char *prompt, int verify)); int RSA_sign(int type, const unsigned char *m, unsigned int m_length, unsigned char *sigret, unsigned int *siglen, RSA *rsa); int RSA_verify(int type, const unsigned char *m, unsigned int m_length, unsigned char *sigbuf, unsigned int siglen, RSA *rsa); int RSA_sign_ASN1_OCTET_STRING(int type, const unsigned char *m, unsigned int m_length, unsigned char *sigret, unsigned int *siglen, RSA *rsa); int RSA_verify_ASN1_OCTET_STRING(int type, const unsigned char *m, unsigned int m_length, unsigned char *sigbuf, unsigned int siglen, RSA *rsa); int RSA_blinding_on(RSA *rsa, BN_CTX *ctx); void RSA_blinding_off(RSA *rsa); BN_BLINDING *RSA_setup_blinding(RSA *rsa, BN_CTX *ctx); int RSA_padding_add_PKCS1_type_1(unsigned char *to, int tlen, const unsigned char *f, int fl); int RSA_padding_check_PKCS1_type_1(unsigned char *to, int tlen, const unsigned char *f, int fl, int rsa_len); int RSA_padding_add_PKCS1_type_2(unsigned char *to, int tlen, const unsigned char *f, int fl); int RSA_padding_check_PKCS1_type_2(unsigned char *to, int tlen, const unsigned char *f, int fl, int rsa_len); int PKCS1_MGF1(unsigned char *mask, long len, const unsigned char *seed, long seedlen, const EVP_MD *dgst); int RSA_padding_add_PKCS1_OAEP(unsigned char *to, int tlen, const unsigned char *f, int fl, const unsigned char *p, int pl); int RSA_padding_check_PKCS1_OAEP(unsigned char *to, int tlen, const unsigned char *f, int fl, int rsa_len, const unsigned char *p, int pl); int RSA_padding_add_SSLv23(unsigned char *to, int tlen, const unsigned char *f, int fl); int RSA_padding_check_SSLv23(unsigned char *to, int tlen, const unsigned char *f, int fl, int rsa_len); int RSA_padding_add_none(unsigned char *to, int tlen, const unsigned char *f, int fl); int RSA_padding_check_none(unsigned char *to, int tlen, const unsigned char *f, int fl, int rsa_len); int RSA_padding_add_X931(unsigned char *to, int tlen, const unsigned char *f, int fl); int RSA_padding_check_X931(unsigned char *to, int tlen, const unsigned char *f, int fl, int rsa_len); int RSA_X931_hash_id(int nid); int RSA_verify_PKCS1_PSS(RSA *rsa, const unsigned char *mHash, const EVP_MD *Hash, const unsigned char *EM, int sLen); int RSA_padding_add_PKCS1_PSS(RSA *rsa, unsigned char *EM, const unsigned char *mHash, const EVP_MD *Hash, int sLen); int RSA_get_ex_new_index(long argl, void *argp, CRYPTO_EX_new *new_func, CRYPTO_EX_dup *dup_func, CRYPTO_EX_free *free_func); int RSA_set_ex_data(RSA *r, int idx, void *arg); void *RSA_get_ex_data(const RSA *r, int idx); RSA *RSAPublicKey_dup(RSA *rsa); RSA *RSAPrivateKey_dup(RSA *rsa); void ERR_load_RSA_strings(void); #line 475 "/usr/include/openssl/rsa.h" #line 521 "/usr/include/openssl/rsa.h" #line 88 "/usr/include/openssl/x509.h" #line 1 "/usr/include/openssl/dsa.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 69 "/usr/include/openssl/dsa.h" #line 1 "/usr/include/openssl/dh.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 63 "/usr/include/openssl/dh.h" #line 75 "/usr/include/openssl/dh.h" struct dh_method { const char *name; int (*generate_key) (DH *dh); int (*compute_key) (unsigned char *key, const BIGNUM *pub_key, DH *dh); int (*bn_mod_exp) (const DH *dh, BIGNUM *r, const BIGNUM *a, const BIGNUM *p, const BIGNUM *m, BN_CTX *ctx, BN_MONT_CTX *m_ctx); int (*init) (DH *dh); int (*finish) (DH *dh); int flags; char *app_data; int (*generate_params) (DH *dh, int prime_len, int generator, BN_GENCB *cb); }; struct dh_st { int pad; int version; BIGNUM *p; BIGNUM *g; long length; BIGNUM *pub_key; BIGNUM *priv_key; int flags; BN_MONT_CTX *method_mont_p; BIGNUM *q; BIGNUM *j; unsigned char *seed; int seedlen; BIGNUM *counter; int references; CRYPTO_EX_DATA ex_data; const DH_METHOD *meth; ENGINE *engine; }; #line 173 "/usr/include/openssl/dh.h" const DH_METHOD *DH_OpenSSL(void); void DH_set_default_method(const DH_METHOD *meth); const DH_METHOD *DH_get_default_method(void); int DH_set_method(DH *dh, const DH_METHOD *meth); DH *DH_new_method(ENGINE *engine); DH *DH_new(void); void DH_free(DH *dh); int DH_up_ref(DH *dh); int DH_size(const DH *dh); int DH_get_ex_new_index(long argl, void *argp, CRYPTO_EX_new *new_func, CRYPTO_EX_dup *dup_func, CRYPTO_EX_free *free_func); int DH_set_ex_data(DH *d, int idx, void *arg); void *DH_get_ex_data(DH *d, int idx); DH *DH_generate_parameters(int prime_len, int generator, void (*callback) (int, int, void *), void *cb_arg); int DH_generate_parameters_ex(DH *dh, int prime_len, int generator, BN_GENCB *cb); int DH_check(const DH *dh, int *codes); int DH_check_pub_key(const DH *dh, const BIGNUM *pub_key, int *codes); int DH_generate_key(DH *dh); int DH_compute_key(unsigned char *key, const BIGNUM *pub_key, DH *dh); DH *d2i_DHparams(DH **a, const unsigned char **pp, long length); int i2d_DHparams(const DH *a, unsigned char **pp); int DHparams_print_fp(FILE *fp, const DH *x); int DHparams_print(BIO *bp, const DH *x); void ERR_load_DH_strings(void); #line 240 "/usr/include/openssl/dh.h" #line 84 "/usr/include/openssl/dsa.h" typedef struct DSA_SIG_st { BIGNUM *r; BIGNUM *s; } DSA_SIG; struct dsa_method { const char *name; DSA_SIG *(*dsa_do_sign) (const unsigned char *dgst, int dlen, DSA *dsa); int (*dsa_sign_setup) (DSA *dsa, BN_CTX *ctx_in, BIGNUM **kinvp, BIGNUM **rp); int (*dsa_do_verify) (const unsigned char *dgst, int dgst_len, DSA_SIG *sig, DSA *dsa); int (*dsa_mod_exp) (DSA *dsa, BIGNUM *rr, BIGNUM *a1, BIGNUM *p1, BIGNUM *a2, BIGNUM *p2, BIGNUM *m, BN_CTX *ctx, BN_MONT_CTX *in_mont); int (*bn_mod_exp) (DSA *dsa, BIGNUM *r, BIGNUM *a, const BIGNUM *p, const BIGNUM *m, BN_CTX *ctx, BN_MONT_CTX *m_ctx); int (*init) (DSA *dsa); int (*finish) (DSA *dsa); int flags; char *app_data; int (*dsa_paramgen) (DSA *dsa, int bits, unsigned char *seed, int seed_len, int *counter_ret, unsigned long *h_ret, BN_GENCB *cb); int (*dsa_keygen) (DSA *dsa); }; struct dsa_st { int pad; long version; int write_params; BIGNUM *p; BIGNUM *q; BIGNUM *g; BIGNUM *pub_key; BIGNUM *priv_key; BIGNUM *kinv; BIGNUM *r; int flags; BN_MONT_CTX *method_mont_p; int references; CRYPTO_EX_DATA ex_data; const DSA_METHOD *meth; ENGINE *engine; }; #line 193 "/usr/include/openssl/dsa.h" DSA_SIG *DSA_SIG_new(void); void DSA_SIG_free(DSA_SIG *a); int i2d_DSA_SIG(const DSA_SIG *a, unsigned char **pp); DSA_SIG *d2i_DSA_SIG(DSA_SIG **v, const unsigned char **pp, long length); DSA_SIG *DSA_do_sign(const unsigned char *dgst, int dlen, DSA *dsa); int DSA_do_verify(const unsigned char *dgst, int dgst_len, DSA_SIG *sig, DSA *dsa); const DSA_METHOD *DSA_OpenSSL(void); void DSA_set_default_method(const DSA_METHOD *); const DSA_METHOD *DSA_get_default_method(void); int DSA_set_method(DSA *dsa, const DSA_METHOD *); DSA *DSA_new(void); DSA *DSA_new_method(ENGINE *engine); void DSA_free(DSA *r); int DSA_up_ref(DSA *r); int DSA_size(const DSA *); int DSA_sign_setup(DSA *dsa, BN_CTX *ctx_in, BIGNUM **kinvp, BIGNUM **rp); int DSA_sign(int type, const unsigned char *dgst, int dlen, unsigned char *sig, unsigned int *siglen, DSA *dsa); int DSA_verify(int type, const unsigned char *dgst, int dgst_len, const unsigned char *sigbuf, int siglen, DSA *dsa); int DSA_get_ex_new_index(long argl, void *argp, CRYPTO_EX_new *new_func, CRYPTO_EX_dup *dup_func, CRYPTO_EX_free *free_func); int DSA_set_ex_data(DSA *d, int idx, void *arg); void *DSA_get_ex_data(DSA *d, int idx); DSA *d2i_DSAPublicKey(DSA **a, const unsigned char **pp, long length); DSA *d2i_DSAPrivateKey(DSA **a, const unsigned char **pp, long length); DSA *d2i_DSAparams(DSA **a, const unsigned char **pp, long length); DSA *DSA_generate_parameters(int bits, unsigned char *seed, int seed_len, int *counter_ret, unsigned long *h_ret, void (*callback) (int, int, void *), void *cb_arg); int DSA_generate_parameters_ex(DSA *dsa, int bits, unsigned char *seed, int seed_len, int *counter_ret, unsigned long *h_ret, BN_GENCB *cb); int DSA_generate_key(DSA *a); int i2d_DSAPublicKey(const DSA *a, unsigned char **pp); int i2d_DSAPrivateKey(const DSA *a, unsigned char **pp); int i2d_DSAparams(const DSA *a, unsigned char **pp); int DSAparams_print(BIO *bp, const DSA *x); int DSA_print(BIO *bp, const DSA *x, int off); int DSAparams_print_fp(FILE *fp, const DSA *x); int DSA_print_fp(FILE *bp, const DSA *x, int off); DH *DSA_dup_DH(const DSA *r); void ERR_load_DSA_strings(void); #line 313 "/usr/include/openssl/dsa.h" #line 322 "/usr/include/openssl/dsa.h" #line 91 "/usr/include/openssl/x509.h" #line 1 "/usr/include/openssl/sha.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 63 "/usr/include/openssl/sha.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "/usr/include/openssl/sha.h" #line 92 "/usr/include/openssl/sha.h" #line 99 "/usr/include/openssl/sha.h" typedef struct SHAstate_st { unsigned int h0, h1, h2, h3, h4; unsigned int Nl, Nh; unsigned int data[16]; unsigned int num; } SHA_CTX; int SHA_Init(SHA_CTX *c); int SHA_Update(SHA_CTX *c, const void *data, size_t len); int SHA_Final(unsigned char *md, SHA_CTX *c); unsigned char *SHA(const unsigned char *d, size_t n, unsigned char *md); void SHA_Transform(SHA_CTX *c, const unsigned char *data); int SHA1_Init(SHA_CTX *c); int SHA1_Update(SHA_CTX *c, const void *data, size_t len); int SHA1_Final(unsigned char *md, SHA_CTX *c); unsigned char *SHA1(const unsigned char *d, size_t n, unsigned char *md); void SHA1_Transform(SHA_CTX *c, const unsigned char *data); typedef struct SHA256state_st { unsigned int h[8]; unsigned int Nl, Nh; unsigned int data[16]; unsigned int num, md_len; } SHA256_CTX; int SHA224_Init(SHA256_CTX *c); int SHA224_Update(SHA256_CTX *c, const void *data, size_t len); int SHA224_Final(unsigned char *md, SHA256_CTX *c); unsigned char *SHA224(const unsigned char *d, size_t n, unsigned char *md); int SHA256_Init(SHA256_CTX *c); int SHA256_Update(SHA256_CTX *c, const void *data, size_t len); int SHA256_Final(unsigned char *md, SHA256_CTX *c); unsigned char *SHA256(const unsigned char *d, size_t n, unsigned char *md); void SHA256_Transform(SHA256_CTX *c, const unsigned char *data); #line 175 "/usr/include/openssl/sha.h" typedef struct SHA512state_st { unsigned long h[8]; unsigned long Nl, Nh; union { unsigned long d[16]; unsigned char p[(16*8)]; } u; unsigned int num, md_len; } SHA512_CTX; int SHA384_Init(SHA512_CTX *c); int SHA384_Update(SHA512_CTX *c, const void *data, size_t len); int SHA384_Final(unsigned char *md, SHA512_CTX *c); unsigned char *SHA384(const unsigned char *d, size_t n, unsigned char *md); int SHA512_Init(SHA512_CTX *c); int SHA512_Update(SHA512_CTX *c, const void *data, size_t len); int SHA512_Final(unsigned char *md, SHA512_CTX *c); unsigned char *SHA512(const unsigned char *d, size_t n, unsigned char *md); void SHA512_Transform(SHA512_CTX *c, const unsigned char *data); #line 99 "/usr/include/openssl/x509.h" #line 112 "/usr/include/openssl/x509.h" #line 127 "/usr/include/openssl/x509.h" typedef struct X509_objects_st { int nid; int (*a2i) (void); int (*i2a) (void); } X509_OBJECTS; struct X509_algor_st { ASN1_OBJECT *algorithm; ASN1_TYPE *parameter; } ; typedef STACK X509_ALGORS; typedef struct X509_val_st { ASN1_TIME *notBefore; ASN1_TIME *notAfter; } X509_VAL; typedef struct X509_pubkey_st { X509_ALGOR *algor; ASN1_BIT_STRING *public_key; EVP_PKEY *pkey; } X509_PUBKEY; typedef struct X509_sig_st { X509_ALGOR *algor; ASN1_OCTET_STRING *digest; } X509_SIG; typedef struct X509_name_entry_st { ASN1_OBJECT *object; ASN1_STRING *value; int set; int size; } X509_NAME_ENTRY; struct X509_name_st { STACK *entries; int modified; BUF_MEM *bytes; unsigned long hash; } ; typedef struct X509_extension_st { ASN1_OBJECT *object; ASN1_BOOLEAN critical; ASN1_OCTET_STRING *value; } X509_EXTENSION; typedef STACK X509_EXTENSIONS; typedef struct x509_attributes_st { ASN1_OBJECT *object; int single; union { char *ptr; STACK *set; ASN1_TYPE *single; } value; } X509_ATTRIBUTE; typedef struct X509_req_info_st { ASN1_ENCODING enc; ASN1_INTEGER *version; X509_NAME *subject; X509_PUBKEY *pubkey; STACK *attributes; } X509_REQ_INFO; typedef struct X509_req_st { X509_REQ_INFO *req_info; X509_ALGOR *sig_alg; ASN1_BIT_STRING *signature; int references; } X509_REQ; typedef struct x509_cinf_st { ASN1_INTEGER *version; ASN1_INTEGER *serialNumber; X509_ALGOR *signature; X509_NAME *issuer; X509_VAL *validity; X509_NAME *subject; X509_PUBKEY *key; ASN1_BIT_STRING *issuerUID; ASN1_BIT_STRING *subjectUID; STACK *extensions; ASN1_ENCODING enc; } X509_CINF; typedef struct x509_cert_aux_st { STACK *trust; STACK *reject; ASN1_UTF8STRING *alias; ASN1_OCTET_STRING *keyid; STACK *other; } X509_CERT_AUX; struct x509_st { X509_CINF *cert_info; X509_ALGOR *sig_alg; ASN1_BIT_STRING *signature; int valid; int references; char *name; CRYPTO_EX_DATA ex_data; long ex_pathlen; long ex_pcpathlen; unsigned long ex_flags; unsigned long ex_kusage; unsigned long ex_xkusage; unsigned long ex_nscert; ASN1_OCTET_STRING *skid; struct AUTHORITY_KEYID_st *akid; X509_POLICY_CACHE *policy_cache; unsigned char sha1_hash[20]; X509_CERT_AUX *aux; } ; typedef struct x509_trust_st { int trust; int flags; int (*check_trust) (struct x509_trust_st *, X509 *, int); char *name; int arg1; void *arg2; } X509_TRUST; typedef struct x509_cert_pair_st { X509 *forward; X509 *reverse; } X509_CERT_PAIR; #line 319 "/usr/include/openssl/x509.h" #line 349 "/usr/include/openssl/x509.h" #line 362 "/usr/include/openssl/x509.h" #line 410 "/usr/include/openssl/x509.h" typedef struct X509_revoked_st { ASN1_INTEGER *serialNumber; ASN1_TIME *revocationDate; STACK *extensions; int sequence; } X509_REVOKED; typedef struct X509_crl_info_st { ASN1_INTEGER *version; X509_ALGOR *sig_alg; X509_NAME *issuer; ASN1_TIME *lastUpdate; ASN1_TIME *nextUpdate; STACK *revoked; STACK *extensions; ASN1_ENCODING enc; } X509_CRL_INFO; struct X509_crl_st { X509_CRL_INFO *crl; X509_ALGOR *sig_alg; ASN1_BIT_STRING *signature; int references; } ; typedef struct private_key_st { int version; X509_ALGOR *enc_algor; ASN1_OCTET_STRING *enc_pkey; EVP_PKEY *dec_pkey; int key_length; char *key_data; int key_free; EVP_CIPHER_INFO cipher; int references; } X509_PKEY; typedef struct X509_info_st { X509 *x509; X509_CRL *crl; X509_PKEY *x_pkey; EVP_CIPHER_INFO enc_cipher; int enc_len; char *enc_data; int references; } X509_INFO; typedef struct Netscape_spkac_st { X509_PUBKEY *pubkey; ASN1_IA5STRING *challenge; } NETSCAPE_SPKAC; typedef struct Netscape_spki_st { NETSCAPE_SPKAC *spkac; X509_ALGOR *sig_algor; ASN1_BIT_STRING *signature; } NETSCAPE_SPKI; typedef struct Netscape_certificate_sequence { ASN1_OBJECT *type; STACK *certs; } NETSCAPE_CERT_SEQUENCE; typedef struct PBEPARAM_st { ASN1_OCTET_STRING *salt; ASN1_INTEGER *iter; } PBEPARAM; typedef struct PBE2PARAM_st { X509_ALGOR *keyfunc; X509_ALGOR *encryption; } PBE2PARAM; typedef struct PBKDF2PARAM_st { ASN1_TYPE *salt; ASN1_INTEGER *iter; ASN1_INTEGER *keylength; X509_ALGOR *prf; } PBKDF2PARAM; typedef struct pkcs8_priv_key_info_st { int broken; ASN1_INTEGER *version; X509_ALGOR *pkeyalg; ASN1_TYPE *pkey; STACK *attributes; } PKCS8_PRIV_KEY_INFO; #line 1 "/usr/include/openssl/x509_vfy.h" #line 66 "/usr/include/openssl/x509_vfy.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 71 "/usr/include/openssl/x509_vfy.h" #line 1 "/usr/include/openssl/lhash.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 67 "/usr/include/openssl/lhash.h" typedef struct lhash_node_st { void *data; struct lhash_node_st *next; unsigned long hash; } LHASH_NODE; typedef int (*LHASH_COMP_FN_TYPE) (const void *, const void *); typedef unsigned long (*LHASH_HASH_FN_TYPE) (const void *); typedef void (*LHASH_DOALL_FN_TYPE) (void *); typedef void (*LHASH_DOALL_ARG_FN_TYPE) (void *, void *); #line 109 "/usr/include/openssl/lhash.h" #line 119 "/usr/include/openssl/lhash.h" #line 128 "/usr/include/openssl/lhash.h" #line 138 "/usr/include/openssl/lhash.h" typedef struct lhash_st { LHASH_NODE **b; LHASH_COMP_FN_TYPE comp; LHASH_HASH_FN_TYPE hash; unsigned int num_nodes; unsigned int num_alloc_nodes; unsigned int p; unsigned int pmax; unsigned long up_load; unsigned long down_load; unsigned long num_items; unsigned long num_expands; unsigned long num_expand_reallocs; unsigned long num_contracts; unsigned long num_contract_reallocs; unsigned long num_hash_calls; unsigned long num_comp_calls; unsigned long num_insert; unsigned long num_replace; unsigned long num_delete; unsigned long num_no_delete; unsigned long num_retrieve; unsigned long num_retrieve_miss; unsigned long num_hash_comps; int error; } LHASH; LHASH *lh_new(LHASH_HASH_FN_TYPE h, LHASH_COMP_FN_TYPE c); void lh_free(LHASH *lh); void *lh_insert(LHASH *lh, void *data); void *lh_delete(LHASH *lh, const void *data); void *lh_retrieve(LHASH *lh, const void *data); void lh_doall(LHASH *lh, LHASH_DOALL_FN_TYPE func); void lh_doall_arg(LHASH *lh, LHASH_DOALL_ARG_FN_TYPE func, void *arg); unsigned long lh_strhash(const char *c); unsigned long lh_num_items(const LHASH *lh); void lh_stats(const LHASH *lh, FILE *out); void lh_node_stats(const LHASH *lh, FILE *out); void lh_node_usage_stats(const LHASH *lh, FILE *out); void lh_stats_bio(const LHASH *lh, BIO *out); void lh_node_stats_bio(const LHASH *lh, BIO *out); void lh_node_usage_stats_bio(const LHASH *lh, BIO *out); #line 73 "/usr/include/openssl/x509_vfy.h" #line 1 "/usr/include/openssl/symhacks.h" #line 436 "/usr/include/openssl/symhacks.h" #line 77 "/usr/include/openssl/x509_vfy.h" typedef struct x509_hash_dir_st { int num_dirs; char **dirs; int *dirs_type; int num_dirs_alloced; } X509_HASH_DIR_CTX; typedef struct x509_file_st { int num_paths; int num_alloced; char **paths; int *path_type; } X509_CERT_FILE_CTX; typedef struct x509_object_st { int type; union { char *ptr; X509 *x509; X509_CRL *crl; EVP_PKEY *pkey; } data; } X509_OBJECT; typedef struct x509_lookup_st X509_LOOKUP; typedef struct x509_lookup_method_st { const char *name; int (*new_item) (X509_LOOKUP *ctx); void (*free) (X509_LOOKUP *ctx); int (*init) (X509_LOOKUP *ctx); int (*shutdown) (X509_LOOKUP *ctx); int (*ctrl) (X509_LOOKUP *ctx, int cmd, const char *argc, long argl, char **ret); int (*get_by_subject) (X509_LOOKUP *ctx, int type, X509_NAME *name, X509_OBJECT *ret); int (*get_by_issuer_serial) (X509_LOOKUP *ctx, int type, X509_NAME *name, ASN1_INTEGER *serial, X509_OBJECT *ret); int (*get_by_fingerprint) (X509_LOOKUP *ctx, int type, unsigned char *bytes, int len, X509_OBJECT *ret); int (*get_by_alias) (X509_LOOKUP *ctx, int type, char *str, int len, X509_OBJECT *ret); } X509_LOOKUP_METHOD; typedef struct X509_VERIFY_PARAM_st { char *name; time_t check_time; unsigned long inh_flags; unsigned long flags; int purpose; int trust; int depth; STACK *policies; } X509_VERIFY_PARAM; struct x509_store_st { int cache; STACK *objs; STACK *get_cert_methods; X509_VERIFY_PARAM *param; int (*verify) (X509_STORE_CTX *ctx); int (*verify_cb) (int ok, X509_STORE_CTX *ctx); int (*get_issuer) (X509 **issuer, X509_STORE_CTX *ctx, X509 *x); int (*check_issued) (X509_STORE_CTX *ctx, X509 *x, X509 *issuer); int (*check_revocation) (X509_STORE_CTX *ctx); int (*get_crl) (X509_STORE_CTX *ctx, X509_CRL **crl, X509 *x); int (*check_crl) (X509_STORE_CTX *ctx, X509_CRL *crl); int (*cert_crl) (X509_STORE_CTX *ctx, X509_CRL *crl, X509 *x); int (*cleanup) (X509_STORE_CTX *ctx); CRYPTO_EX_DATA ex_data; int references; } ; int X509_STORE_set_depth(X509_STORE *store, int depth); struct x509_lookup_st { int init; int skip; X509_LOOKUP_METHOD *method; char *method_data; X509_STORE *store_ctx; } ; struct x509_store_ctx_st { X509_STORE *ctx; int current_method; X509 *cert; STACK *untrusted; STACK *crls; X509_VERIFY_PARAM *param; void *other_ctx; int (*verify) (X509_STORE_CTX *ctx); int (*verify_cb) (int ok, X509_STORE_CTX *ctx); int (*get_issuer) (X509 **issuer, X509_STORE_CTX *ctx, X509 *x); int (*check_issued) (X509_STORE_CTX *ctx, X509 *x, X509 *issuer); int (*check_revocation) (X509_STORE_CTX *ctx); int (*get_crl) (X509_STORE_CTX *ctx, X509_CRL **crl, X509 *x); int (*check_crl) (X509_STORE_CTX *ctx, X509_CRL *crl); int (*cert_crl) (X509_STORE_CTX *ctx, X509_CRL *crl, X509 *x); int (*check_policy) (X509_STORE_CTX *ctx); int (*cleanup) (X509_STORE_CTX *ctx); int valid; int last_untrusted; STACK *chain; X509_POLICY_TREE *tree; int explicit_policy; int error_depth; int error; X509 *current_cert; X509 *current_issuer; X509_CRL *current_crl; CRYPTO_EX_DATA ex_data; } ; void X509_STORE_CTX_set_depth(X509_STORE_CTX *ctx, int depth); #line 330 "/usr/include/openssl/x509_vfy.h" #line 344 "/usr/include/openssl/x509_vfy.h" int X509_OBJECT_idx_by_subject(STACK *h, int type, X509_NAME *name); X509_OBJECT *X509_OBJECT_retrieve_by_subject(STACK *h, int type, X509_NAME *name); X509_OBJECT *X509_OBJECT_retrieve_match(STACK *h, X509_OBJECT *x); void X509_OBJECT_up_ref_count(X509_OBJECT *a); void X509_OBJECT_free_contents(X509_OBJECT *a); X509_STORE *X509_STORE_new(void); void X509_STORE_free(X509_STORE *v); int X509_STORE_set_flags(X509_STORE *ctx, unsigned long flags); int X509_STORE_set_purpose(X509_STORE *ctx, int purpose); int X509_STORE_set_trust(X509_STORE *ctx, int trust); int X509_STORE_set1_param(X509_STORE *ctx, X509_VERIFY_PARAM *pm); X509_STORE_CTX *X509_STORE_CTX_new(void); int X509_STORE_CTX_get1_issuer(X509 **issuer, X509_STORE_CTX *ctx, X509 *x); void X509_STORE_CTX_free(X509_STORE_CTX *ctx); int X509_STORE_CTX_init(X509_STORE_CTX *ctx, X509_STORE *store, X509 *x509, STACK *chain); void X509_STORE_CTX_trusted_stack(X509_STORE_CTX *ctx, STACK *sk); void X509_STORE_CTX_cleanup(X509_STORE_CTX *ctx); X509_LOOKUP *X509_STORE_add_lookup(X509_STORE *v, X509_LOOKUP_METHOD *m); X509_LOOKUP_METHOD *X509_LOOKUP_hash_dir(void); X509_LOOKUP_METHOD *X509_LOOKUP_file(void); int X509_STORE_add_cert(X509_STORE *ctx, X509 *x); int X509_STORE_add_crl(X509_STORE *ctx, X509_CRL *x); int X509_STORE_get_by_subject(X509_STORE_CTX *vs, int type, X509_NAME *name, X509_OBJECT *ret); int X509_LOOKUP_ctrl(X509_LOOKUP *ctx, int cmd, const char *argc, long argl, char **ret); int X509_load_cert_file(X509_LOOKUP *ctx, const char *file, int type); int X509_load_crl_file(X509_LOOKUP *ctx, const char *file, int type); int X509_load_cert_crl_file(X509_LOOKUP *ctx, const char *file, int type); X509_LOOKUP *X509_LOOKUP_new(X509_LOOKUP_METHOD *method); void X509_LOOKUP_free(X509_LOOKUP *ctx); int X509_LOOKUP_init(X509_LOOKUP *ctx); int X509_LOOKUP_by_subject(X509_LOOKUP *ctx, int type, X509_NAME *name, X509_OBJECT *ret); int X509_LOOKUP_by_issuer_serial(X509_LOOKUP *ctx, int type, X509_NAME *name, ASN1_INTEGER *serial, X509_OBJECT *ret); int X509_LOOKUP_by_fingerprint(X509_LOOKUP *ctx, int type, unsigned char *bytes, int len, X509_OBJECT *ret); int X509_LOOKUP_by_alias(X509_LOOKUP *ctx, int type, char *str, int len, X509_OBJECT *ret); int X509_LOOKUP_shutdown(X509_LOOKUP *ctx); int X509_STORE_load_locations(X509_STORE *ctx, const char *file, const char *dir); int X509_STORE_set_default_paths(X509_STORE *ctx); int X509_STORE_CTX_get_ex_new_index(long argl, void *argp, CRYPTO_EX_new *new_func, CRYPTO_EX_dup *dup_func, CRYPTO_EX_free *free_func); int X509_STORE_CTX_set_ex_data(X509_STORE_CTX *ctx, int idx, void *data); void *X509_STORE_CTX_get_ex_data(X509_STORE_CTX *ctx, int idx); int X509_STORE_CTX_get_error(X509_STORE_CTX *ctx); void X509_STORE_CTX_set_error(X509_STORE_CTX *ctx, int s); int X509_STORE_CTX_get_error_depth(X509_STORE_CTX *ctx); X509 *X509_STORE_CTX_get_current_cert(X509_STORE_CTX *ctx); STACK *X509_STORE_CTX_get_chain(X509_STORE_CTX *ctx); STACK *X509_STORE_CTX_get1_chain(X509_STORE_CTX *ctx); void X509_STORE_CTX_set_cert(X509_STORE_CTX *c, X509 *x); void X509_STORE_CTX_set_chain(X509_STORE_CTX *c, STACK *sk); void X509_STORE_CTX_set0_crls(X509_STORE_CTX *c, STACK *sk); int X509_STORE_CTX_set_purpose(X509_STORE_CTX *ctx, int purpose); int X509_STORE_CTX_set_trust(X509_STORE_CTX *ctx, int trust); int X509_STORE_CTX_purpose_inherit(X509_STORE_CTX *ctx, int def_purpose, int purpose, int trust); void X509_STORE_CTX_set_flags(X509_STORE_CTX *ctx, unsigned long flags); void X509_STORE_CTX_set_time(X509_STORE_CTX *ctx, unsigned long flags, time_t t); void X509_STORE_CTX_set_verify_cb(X509_STORE_CTX *ctx, int (*verify_cb) (int, X509_STORE_CTX *)); X509_POLICY_TREE *X509_STORE_CTX_get0_policy_tree(X509_STORE_CTX *ctx); int X509_STORE_CTX_get_explicit_policy(X509_STORE_CTX *ctx); X509_VERIFY_PARAM *X509_STORE_CTX_get0_param(X509_STORE_CTX *ctx); void X509_STORE_CTX_set0_param(X509_STORE_CTX *ctx, X509_VERIFY_PARAM *param); int X509_STORE_CTX_set_default(X509_STORE_CTX *ctx, const char *name); X509_VERIFY_PARAM *X509_VERIFY_PARAM_new(void); void X509_VERIFY_PARAM_free(X509_VERIFY_PARAM *param); int X509_VERIFY_PARAM_inherit(X509_VERIFY_PARAM *to, const X509_VERIFY_PARAM *from); int X509_VERIFY_PARAM_set1(X509_VERIFY_PARAM *to, const X509_VERIFY_PARAM *from); int X509_VERIFY_PARAM_set1_name(X509_VERIFY_PARAM *param, const char *name); int X509_VERIFY_PARAM_set_flags(X509_VERIFY_PARAM *param, unsigned long flags); int X509_VERIFY_PARAM_clear_flags(X509_VERIFY_PARAM *param, unsigned long flags); unsigned long X509_VERIFY_PARAM_get_flags(X509_VERIFY_PARAM *param); int X509_VERIFY_PARAM_set_purpose(X509_VERIFY_PARAM *param, int purpose); int X509_VERIFY_PARAM_set_trust(X509_VERIFY_PARAM *param, int trust); void X509_VERIFY_PARAM_set_depth(X509_VERIFY_PARAM *param, int depth); void X509_VERIFY_PARAM_set_time(X509_VERIFY_PARAM *param, time_t t); int X509_VERIFY_PARAM_add0_policy(X509_VERIFY_PARAM *param, ASN1_OBJECT *policy); int X509_VERIFY_PARAM_set1_policies(X509_VERIFY_PARAM *param, STACK *policies); int X509_VERIFY_PARAM_get_depth(const X509_VERIFY_PARAM *param); int X509_VERIFY_PARAM_add0_table(X509_VERIFY_PARAM *param); const X509_VERIFY_PARAM *X509_VERIFY_PARAM_lookup(const char *name); void X509_VERIFY_PARAM_table_cleanup(void); int X509_policy_check(X509_POLICY_TREE **ptree, int *pexplicit_policy, STACK *certs, STACK *policy_oids, unsigned int flags); void X509_policy_tree_free(X509_POLICY_TREE *tree); int X509_policy_tree_level_count(const X509_POLICY_TREE *tree); X509_POLICY_LEVEL *X509_policy_tree_get0_level(const X509_POLICY_TREE *tree, int i); STACK *X509_policy_tree_get0_policies(const X509_POLICY_TREE *tree); STACK *X509_policy_tree_get0_user_policies(const X509_POLICY_TREE *tree); int X509_policy_level_node_count(X509_POLICY_LEVEL *level); X509_POLICY_NODE *X509_policy_level_get0_node(X509_POLICY_LEVEL *level, int i); const ASN1_OBJECT *X509_policy_node_get0_policy(const X509_POLICY_NODE *node); STACK *X509_policy_node_get0_qualifiers(const X509_POLICY_NODE *node); const X509_POLICY_NODE *X509_policy_node_get0_parent(const X509_POLICY_NODE *node); #line 545 "/usr/include/openssl/x509.h" #line 1 "/usr/include/openssl/pkcs7.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 65 "/usr/include/openssl/pkcs7.h" #line 1 "/usr/include/openssl/symhacks.h" #line 436 "/usr/include/openssl/symhacks.h" #line 67 "/usr/include/openssl/pkcs7.h" typedef struct pkcs7_issuer_and_serial_st { X509_NAME *issuer; ASN1_INTEGER *serial; } PKCS7_ISSUER_AND_SERIAL; typedef struct pkcs7_signer_info_st { ASN1_INTEGER *version; PKCS7_ISSUER_AND_SERIAL *issuer_and_serial; X509_ALGOR *digest_alg; STACK *auth_attr; X509_ALGOR *digest_enc_alg; ASN1_OCTET_STRING *enc_digest; STACK *unauth_attr; EVP_PKEY *pkey; } PKCS7_SIGNER_INFO; typedef struct pkcs7_recip_info_st { ASN1_INTEGER *version; PKCS7_ISSUER_AND_SERIAL *issuer_and_serial; X509_ALGOR *key_enc_algor; ASN1_OCTET_STRING *enc_key; X509 *cert; } PKCS7_RECIP_INFO; typedef struct pkcs7_signed_st { ASN1_INTEGER *version; STACK *md_algs; STACK *cert; STACK *crl; STACK *signer_info; struct pkcs7_st *contents; } PKCS7_SIGNED; typedef struct pkcs7_enc_content_st { ASN1_OBJECT *content_type; X509_ALGOR *algorithm; ASN1_OCTET_STRING *enc_data; const EVP_CIPHER *cipher; } PKCS7_ENC_CONTENT; typedef struct pkcs7_enveloped_st { ASN1_INTEGER *version; STACK *recipientinfo; PKCS7_ENC_CONTENT *enc_data; } PKCS7_ENVELOPE; typedef struct pkcs7_signedandenveloped_st { ASN1_INTEGER *version; STACK *md_algs; STACK *cert; STACK *crl; STACK *signer_info; PKCS7_ENC_CONTENT *enc_data; STACK *recipientinfo; } PKCS7_SIGN_ENVELOPE; typedef struct pkcs7_digest_st { ASN1_INTEGER *version; X509_ALGOR *md; struct pkcs7_st *contents; ASN1_OCTET_STRING *digest; } PKCS7_DIGEST; typedef struct pkcs7_encrypted_st { ASN1_INTEGER *version; PKCS7_ENC_CONTENT *enc_data; } PKCS7_ENCRYPT; typedef struct pkcs7_st { unsigned char *asn1; long length; int state; int detached; ASN1_OBJECT *type; union { char *ptr; ASN1_OCTET_STRING *data; PKCS7_SIGNED *sign; PKCS7_ENVELOPE *enveloped; PKCS7_SIGN_ENVELOPE *signed_and_enveloped; PKCS7_DIGEST *digest; PKCS7_ENCRYPT *encrypted; ASN1_TYPE *other; } d; } PKCS7; #line 218 "/usr/include/openssl/pkcs7.h" #line 235 "/usr/include/openssl/pkcs7.h" #line 252 "/usr/include/openssl/pkcs7.h" #line 264 "/usr/include/openssl/pkcs7.h" PKCS7_ISSUER_AND_SERIAL *PKCS7_ISSUER_AND_SERIAL_new(void); void PKCS7_ISSUER_AND_SERIAL_free(PKCS7_ISSUER_AND_SERIAL *a); PKCS7_ISSUER_AND_SERIAL *d2i_PKCS7_ISSUER_AND_SERIAL(PKCS7_ISSUER_AND_SERIAL * *a, const unsigned char * *in, long len); int i2d_PKCS7_ISSUER_AND_SERIAL(PKCS7_ISSUER_AND_SERIAL *a, unsigned char * *out); extern const ASN1_ITEM PKCS7_ISSUER_AND_SERIAL_it; int PKCS7_ISSUER_AND_SERIAL_digest(PKCS7_ISSUER_AND_SERIAL *data, const EVP_MD *type, unsigned char *md, unsigned int *len); PKCS7 *d2i_PKCS7_fp(FILE *fp, PKCS7 **p7); int i2d_PKCS7_fp(FILE *fp, PKCS7 *p7); PKCS7 *PKCS7_dup(PKCS7 *p7); PKCS7 *d2i_PKCS7_bio(BIO *bp, PKCS7 **p7); int i2d_PKCS7_bio(BIO *bp, PKCS7 *p7); PKCS7_SIGNER_INFO *PKCS7_SIGNER_INFO_new(void); void PKCS7_SIGNER_INFO_free(PKCS7_SIGNER_INFO *a); PKCS7_SIGNER_INFO *d2i_PKCS7_SIGNER_INFO(PKCS7_SIGNER_INFO * *a, const unsigned char * *in, long len); int i2d_PKCS7_SIGNER_INFO(PKCS7_SIGNER_INFO *a, unsigned char * *out); extern const ASN1_ITEM PKCS7_SIGNER_INFO_it; PKCS7_RECIP_INFO *PKCS7_RECIP_INFO_new(void); void PKCS7_RECIP_INFO_free(PKCS7_RECIP_INFO *a); PKCS7_RECIP_INFO *d2i_PKCS7_RECIP_INFO(PKCS7_RECIP_INFO * *a, const unsigned char * *in, long len); int i2d_PKCS7_RECIP_INFO(PKCS7_RECIP_INFO *a, unsigned char * *out); extern const ASN1_ITEM PKCS7_RECIP_INFO_it; PKCS7_SIGNED *PKCS7_SIGNED_new(void); void PKCS7_SIGNED_free(PKCS7_SIGNED *a); PKCS7_SIGNED *d2i_PKCS7_SIGNED(PKCS7_SIGNED * *a, const unsigned char * *in, long len); int i2d_PKCS7_SIGNED(PKCS7_SIGNED *a, unsigned char * *out); extern const ASN1_ITEM PKCS7_SIGNED_it; PKCS7_ENC_CONTENT *PKCS7_ENC_CONTENT_new(void); void PKCS7_ENC_CONTENT_free(PKCS7_ENC_CONTENT *a); PKCS7_ENC_CONTENT *d2i_PKCS7_ENC_CONTENT(PKCS7_ENC_CONTENT * *a, const unsigned char * *in, long len); int i2d_PKCS7_ENC_CONTENT(PKCS7_ENC_CONTENT *a, unsigned char * *out); extern const ASN1_ITEM PKCS7_ENC_CONTENT_it; PKCS7_ENVELOPE *PKCS7_ENVELOPE_new(void); void PKCS7_ENVELOPE_free(PKCS7_ENVELOPE *a); PKCS7_ENVELOPE *d2i_PKCS7_ENVELOPE(PKCS7_ENVELOPE * *a, const unsigned char * *in, long len); int i2d_PKCS7_ENVELOPE(PKCS7_ENVELOPE *a, unsigned char * *out); extern const ASN1_ITEM PKCS7_ENVELOPE_it; PKCS7_SIGN_ENVELOPE *PKCS7_SIGN_ENVELOPE_new(void); void PKCS7_SIGN_ENVELOPE_free(PKCS7_SIGN_ENVELOPE *a); PKCS7_SIGN_ENVELOPE *d2i_PKCS7_SIGN_ENVELOPE(PKCS7_SIGN_ENVELOPE * *a, const unsigned char * *in, long len); int i2d_PKCS7_SIGN_ENVELOPE(PKCS7_SIGN_ENVELOPE *a, unsigned char * *out); extern const ASN1_ITEM PKCS7_SIGN_ENVELOPE_it; PKCS7_DIGEST *PKCS7_DIGEST_new(void); void PKCS7_DIGEST_free(PKCS7_DIGEST *a); PKCS7_DIGEST *d2i_PKCS7_DIGEST(PKCS7_DIGEST * *a, const unsigned char * *in, long len); int i2d_PKCS7_DIGEST(PKCS7_DIGEST *a, unsigned char * *out); extern const ASN1_ITEM PKCS7_DIGEST_it; PKCS7_ENCRYPT *PKCS7_ENCRYPT_new(void); void PKCS7_ENCRYPT_free(PKCS7_ENCRYPT *a); PKCS7_ENCRYPT *d2i_PKCS7_ENCRYPT(PKCS7_ENCRYPT * *a, const unsigned char * *in, long len); int i2d_PKCS7_ENCRYPT(PKCS7_ENCRYPT *a, unsigned char * *out); extern const ASN1_ITEM PKCS7_ENCRYPT_it; PKCS7 *PKCS7_new(void); void PKCS7_free(PKCS7 *a); PKCS7 *d2i_PKCS7(PKCS7 * *a, const unsigned char * *in, long len); int i2d_PKCS7(PKCS7 *a, unsigned char * *out); extern const ASN1_ITEM PKCS7_it; extern const ASN1_ITEM PKCS7_ATTR_SIGN_it; extern const ASN1_ITEM PKCS7_ATTR_VERIFY_it; int i2d_PKCS7_NDEF(PKCS7 *a, unsigned char * *out); long PKCS7_ctrl(PKCS7 *p7, int cmd, long larg, char *parg); int PKCS7_set_type(PKCS7 *p7, int type); int PKCS7_set0_type_other(PKCS7 *p7, int type, ASN1_TYPE *other); int PKCS7_set_content(PKCS7 *p7, PKCS7 *p7_data); int PKCS7_SIGNER_INFO_set(PKCS7_SIGNER_INFO *p7i, X509 *x509, EVP_PKEY *pkey, const EVP_MD *dgst); int PKCS7_add_signer(PKCS7 *p7, PKCS7_SIGNER_INFO *p7i); int PKCS7_add_certificate(PKCS7 *p7, X509 *x509); int PKCS7_add_crl(PKCS7 *p7, X509_CRL *x509); int PKCS7_content_new(PKCS7 *p7, int nid); int PKCS7_dataVerify(X509_STORE *cert_store, X509_STORE_CTX *ctx, BIO *bio, PKCS7 *p7, PKCS7_SIGNER_INFO *si); int PKCS7_signatureVerify(BIO *bio, PKCS7 *p7, PKCS7_SIGNER_INFO *si, X509 *x509); BIO *PKCS7_dataInit(PKCS7 *p7, BIO *bio); int PKCS7_dataFinal(PKCS7 *p7, BIO *bio); BIO *PKCS7_dataDecode(PKCS7 *p7, EVP_PKEY *pkey, BIO *in_bio, X509 *pcert); PKCS7_SIGNER_INFO *PKCS7_add_signature(PKCS7 *p7, X509 *x509, EVP_PKEY *pkey, const EVP_MD *dgst); X509 *PKCS7_cert_from_signer_info(PKCS7 *p7, PKCS7_SIGNER_INFO *si); int PKCS7_set_digest(PKCS7 *p7, const EVP_MD *md); STACK *PKCS7_get_signer_info(PKCS7 *p7); PKCS7_RECIP_INFO *PKCS7_add_recipient(PKCS7 *p7, X509 *x509); int PKCS7_add_recipient_info(PKCS7 *p7, PKCS7_RECIP_INFO *ri); int PKCS7_RECIP_INFO_set(PKCS7_RECIP_INFO *p7i, X509 *x509); int PKCS7_set_cipher(PKCS7 *p7, const EVP_CIPHER *cipher); PKCS7_ISSUER_AND_SERIAL *PKCS7_get_issuer_and_serial(PKCS7 *p7, int idx); ASN1_OCTET_STRING *PKCS7_digest_from_attributes(STACK *sk); int PKCS7_add_signed_attribute(PKCS7_SIGNER_INFO *p7si, int nid, int type, void *data); int PKCS7_add_attribute(PKCS7_SIGNER_INFO *p7si, int nid, int atrtype, void *value); ASN1_TYPE *PKCS7_get_attribute(PKCS7_SIGNER_INFO *si, int nid); ASN1_TYPE *PKCS7_get_signed_attribute(PKCS7_SIGNER_INFO *si, int nid); int PKCS7_set_signed_attributes(PKCS7_SIGNER_INFO *p7si, STACK *sk); int PKCS7_set_attributes(PKCS7_SIGNER_INFO *p7si, STACK *sk); PKCS7 *PKCS7_sign(X509 *signcert, EVP_PKEY *pkey, STACK *certs, BIO *data, int flags); int PKCS7_verify(PKCS7 *p7, STACK *certs, X509_STORE *store, BIO *indata, BIO *out, int flags); STACK *PKCS7_get0_signers(PKCS7 *p7, STACK *certs, int flags); PKCS7 *PKCS7_encrypt(STACK *certs, BIO *in, const EVP_CIPHER *cipher, int flags); int PKCS7_decrypt(PKCS7 *p7, EVP_PKEY *pkey, X509 *cert, BIO *data, int flags); int PKCS7_add_attrib_smimecap(PKCS7_SIGNER_INFO *si, STACK *cap); STACK *PKCS7_get_smimecap(PKCS7_SIGNER_INFO *si); int PKCS7_simple_smimecap(STACK *sk, int nid, int arg); int SMIME_write_PKCS7(BIO *bio, PKCS7 *p7, BIO *data, int flags); PKCS7 *SMIME_read_PKCS7(BIO *bio, BIO **bcont); int SMIME_crlf_copy(BIO *in, BIO *out, int flags); int SMIME_text(BIO *in, BIO *out); void ERR_load_PKCS7_strings(void); #line 398 "/usr/include/openssl/pkcs7.h" #line 446 "/usr/include/openssl/pkcs7.h" #line 546 "/usr/include/openssl/x509.h" #line 695 "/usr/include/openssl/x509.h" #line 709 "/usr/include/openssl/x509.h" const char *X509_verify_cert_error_string(long n); int X509_verify(X509 *a, EVP_PKEY *r); int X509_REQ_verify(X509_REQ *a, EVP_PKEY *r); int X509_CRL_verify(X509_CRL *a, EVP_PKEY *r); int NETSCAPE_SPKI_verify(NETSCAPE_SPKI *a, EVP_PKEY *r); NETSCAPE_SPKI *NETSCAPE_SPKI_b64_decode(const char *str, int len); char *NETSCAPE_SPKI_b64_encode(NETSCAPE_SPKI *x); EVP_PKEY *NETSCAPE_SPKI_get_pubkey(NETSCAPE_SPKI *x); int NETSCAPE_SPKI_set_pubkey(NETSCAPE_SPKI *x, EVP_PKEY *pkey); int NETSCAPE_SPKI_print(BIO *out, NETSCAPE_SPKI *spki); int X509_signature_print(BIO *bp, X509_ALGOR *alg, ASN1_STRING *sig); int X509_sign(X509 *x, EVP_PKEY *pkey, const EVP_MD *md); int X509_REQ_sign(X509_REQ *x, EVP_PKEY *pkey, const EVP_MD *md); int X509_CRL_sign(X509_CRL *x, EVP_PKEY *pkey, const EVP_MD *md); int NETSCAPE_SPKI_sign(NETSCAPE_SPKI *x, EVP_PKEY *pkey, const EVP_MD *md); int X509_pubkey_digest(const X509 *data, const EVP_MD *type, unsigned char *md, unsigned int *len); int X509_digest(const X509 *data, const EVP_MD *type, unsigned char *md, unsigned int *len); int X509_CRL_digest(const X509_CRL *data, const EVP_MD *type, unsigned char *md, unsigned int *len); int X509_REQ_digest(const X509_REQ *data, const EVP_MD *type, unsigned char *md, unsigned int *len); int X509_NAME_digest(const X509_NAME *data, const EVP_MD *type, unsigned char *md, unsigned int *len); X509 *d2i_X509_fp(FILE *fp, X509 **x509); int i2d_X509_fp(FILE *fp, X509 *x509); X509_CRL *d2i_X509_CRL_fp(FILE *fp, X509_CRL **crl); int i2d_X509_CRL_fp(FILE *fp, X509_CRL *crl); X509_REQ *d2i_X509_REQ_fp(FILE *fp, X509_REQ **req); int i2d_X509_REQ_fp(FILE *fp, X509_REQ *req); RSA *d2i_RSAPrivateKey_fp(FILE *fp, RSA **rsa); int i2d_RSAPrivateKey_fp(FILE *fp, RSA *rsa); RSA *d2i_RSAPublicKey_fp(FILE *fp, RSA **rsa); int i2d_RSAPublicKey_fp(FILE *fp, RSA *rsa); RSA *d2i_RSA_PUBKEY_fp(FILE *fp, RSA **rsa); int i2d_RSA_PUBKEY_fp(FILE *fp, RSA *rsa); DSA *d2i_DSA_PUBKEY_fp(FILE *fp, DSA **dsa); int i2d_DSA_PUBKEY_fp(FILE *fp, DSA *dsa); DSA *d2i_DSAPrivateKey_fp(FILE *fp, DSA **dsa); int i2d_DSAPrivateKey_fp(FILE *fp, DSA *dsa); X509_SIG *d2i_PKCS8_fp(FILE *fp, X509_SIG **p8); int i2d_PKCS8_fp(FILE *fp, X509_SIG *p8); PKCS8_PRIV_KEY_INFO *d2i_PKCS8_PRIV_KEY_INFO_fp(FILE *fp, PKCS8_PRIV_KEY_INFO **p8inf); int i2d_PKCS8_PRIV_KEY_INFO_fp(FILE *fp, PKCS8_PRIV_KEY_INFO *p8inf); int i2d_PKCS8PrivateKeyInfo_fp(FILE *fp, EVP_PKEY *key); int i2d_PrivateKey_fp(FILE *fp, EVP_PKEY *pkey); EVP_PKEY *d2i_PrivateKey_fp(FILE *fp, EVP_PKEY **a); int i2d_PUBKEY_fp(FILE *fp, EVP_PKEY *pkey); EVP_PKEY *d2i_PUBKEY_fp(FILE *fp, EVP_PKEY **a); X509 *d2i_X509_bio(BIO *bp, X509 **x509); int i2d_X509_bio(BIO *bp, X509 *x509); X509_CRL *d2i_X509_CRL_bio(BIO *bp, X509_CRL **crl); int i2d_X509_CRL_bio(BIO *bp, X509_CRL *crl); X509_REQ *d2i_X509_REQ_bio(BIO *bp, X509_REQ **req); int i2d_X509_REQ_bio(BIO *bp, X509_REQ *req); RSA *d2i_RSAPrivateKey_bio(BIO *bp, RSA **rsa); int i2d_RSAPrivateKey_bio(BIO *bp, RSA *rsa); RSA *d2i_RSAPublicKey_bio(BIO *bp, RSA **rsa); int i2d_RSAPublicKey_bio(BIO *bp, RSA *rsa); RSA *d2i_RSA_PUBKEY_bio(BIO *bp, RSA **rsa); int i2d_RSA_PUBKEY_bio(BIO *bp, RSA *rsa); DSA *d2i_DSA_PUBKEY_bio(BIO *bp, DSA **dsa); int i2d_DSA_PUBKEY_bio(BIO *bp, DSA *dsa); DSA *d2i_DSAPrivateKey_bio(BIO *bp, DSA **dsa); int i2d_DSAPrivateKey_bio(BIO *bp, DSA *dsa); X509_SIG *d2i_PKCS8_bio(BIO *bp, X509_SIG **p8); int i2d_PKCS8_bio(BIO *bp, X509_SIG *p8); PKCS8_PRIV_KEY_INFO *d2i_PKCS8_PRIV_KEY_INFO_bio(BIO *bp, PKCS8_PRIV_KEY_INFO **p8inf); int i2d_PKCS8_PRIV_KEY_INFO_bio(BIO *bp, PKCS8_PRIV_KEY_INFO *p8inf); int i2d_PKCS8PrivateKeyInfo_bio(BIO *bp, EVP_PKEY *key); int i2d_PrivateKey_bio(BIO *bp, EVP_PKEY *pkey); EVP_PKEY *d2i_PrivateKey_bio(BIO *bp, EVP_PKEY **a); int i2d_PUBKEY_bio(BIO *bp, EVP_PKEY *pkey); EVP_PKEY *d2i_PUBKEY_bio(BIO *bp, EVP_PKEY **a); X509 *X509_dup(X509 *x509); X509_ATTRIBUTE *X509_ATTRIBUTE_dup(X509_ATTRIBUTE *xa); X509_EXTENSION *X509_EXTENSION_dup(X509_EXTENSION *ex); X509_CRL *X509_CRL_dup(X509_CRL *crl); X509_REQ *X509_REQ_dup(X509_REQ *req); X509_ALGOR *X509_ALGOR_dup(X509_ALGOR *xn); int X509_ALGOR_set0(X509_ALGOR *alg, ASN1_OBJECT *aobj, int ptype, void *pval); void X509_ALGOR_get0(ASN1_OBJECT **paobj, int *pptype, void **ppval, X509_ALGOR *algor); int X509_ALGOR_cmp(const X509_ALGOR *a, const X509_ALGOR *b); X509_NAME *X509_NAME_dup(X509_NAME *xn); X509_NAME_ENTRY *X509_NAME_ENTRY_dup(X509_NAME_ENTRY *ne); int X509_cmp_time(ASN1_TIME *s, time_t *t); int X509_cmp_current_time(ASN1_TIME *s); ASN1_TIME *X509_time_adj(ASN1_TIME *s, long adj, time_t *t); ASN1_TIME *X509_gmtime_adj(ASN1_TIME *s, long adj); const char *X509_get_default_cert_area(void); const char *X509_get_default_cert_dir(void); const char *X509_get_default_cert_file(void); const char *X509_get_default_cert_dir_env(void); const char *X509_get_default_cert_file_env(void); const char *X509_get_default_private_dir(void); X509_REQ *X509_to_X509_REQ(X509 *x, EVP_PKEY *pkey, const EVP_MD *md); X509 *X509_REQ_to_X509(X509_REQ *r, int days, EVP_PKEY *pkey); X509_ALGOR *X509_ALGOR_new(void); void X509_ALGOR_free(X509_ALGOR *a); X509_ALGOR *d2i_X509_ALGOR(X509_ALGOR * *a, const unsigned char * *in, long len); int i2d_X509_ALGOR(X509_ALGOR *a, unsigned char * *out); extern const ASN1_ITEM X509_ALGOR_it; X509_ALGORS *d2i_X509_ALGORS(X509_ALGORS * *a, const unsigned char * *in, long len); int i2d_X509_ALGORS(X509_ALGORS *a, unsigned char * *out); extern const ASN1_ITEM X509_ALGORS_it; X509_VAL *X509_VAL_new(void); void X509_VAL_free(X509_VAL *a); X509_VAL *d2i_X509_VAL(X509_VAL * *a, const unsigned char * *in, long len); int i2d_X509_VAL(X509_VAL *a, unsigned char * *out); extern const ASN1_ITEM X509_VAL_it; X509_PUBKEY *X509_PUBKEY_new(void); void X509_PUBKEY_free(X509_PUBKEY *a); X509_PUBKEY *d2i_X509_PUBKEY(X509_PUBKEY * *a, const unsigned char * *in, long len); int i2d_X509_PUBKEY(X509_PUBKEY *a, unsigned char * *out); extern const ASN1_ITEM X509_PUBKEY_it; int X509_PUBKEY_set(X509_PUBKEY **x, EVP_PKEY *pkey); EVP_PKEY *X509_PUBKEY_get(X509_PUBKEY *key); int X509_get_pubkey_parameters(EVP_PKEY *pkey, STACK *chain); int i2d_PUBKEY(EVP_PKEY *a, unsigned char **pp); EVP_PKEY *d2i_PUBKEY(EVP_PKEY **a, const unsigned char **pp, long length); int i2d_RSA_PUBKEY(RSA *a, unsigned char **pp); RSA *d2i_RSA_PUBKEY(RSA **a, const unsigned char **pp, long length); int i2d_DSA_PUBKEY(DSA *a, unsigned char **pp); DSA *d2i_DSA_PUBKEY(DSA **a, const unsigned char **pp, long length); X509_SIG *X509_SIG_new(void); void X509_SIG_free(X509_SIG *a); X509_SIG *d2i_X509_SIG(X509_SIG * *a, const unsigned char * *in, long len); int i2d_X509_SIG(X509_SIG *a, unsigned char * *out); extern const ASN1_ITEM X509_SIG_it; X509_REQ_INFO *X509_REQ_INFO_new(void); void X509_REQ_INFO_free(X509_REQ_INFO *a); X509_REQ_INFO *d2i_X509_REQ_INFO(X509_REQ_INFO * *a, const unsigned char * *in, long len); int i2d_X509_REQ_INFO(X509_REQ_INFO *a, unsigned char * *out); extern const ASN1_ITEM X509_REQ_INFO_it; X509_REQ *X509_REQ_new(void); void X509_REQ_free(X509_REQ *a); X509_REQ *d2i_X509_REQ(X509_REQ * *a, const unsigned char * *in, long len); int i2d_X509_REQ(X509_REQ *a, unsigned char * *out); extern const ASN1_ITEM X509_REQ_it; X509_ATTRIBUTE *X509_ATTRIBUTE_new(void); void X509_ATTRIBUTE_free(X509_ATTRIBUTE *a); X509_ATTRIBUTE *d2i_X509_ATTRIBUTE(X509_ATTRIBUTE * *a, const unsigned char * *in, long len); int i2d_X509_ATTRIBUTE(X509_ATTRIBUTE *a, unsigned char * *out); extern const ASN1_ITEM X509_ATTRIBUTE_it; X509_ATTRIBUTE *X509_ATTRIBUTE_create(int nid, int atrtype, void *value); X509_EXTENSION *X509_EXTENSION_new(void); void X509_EXTENSION_free(X509_EXTENSION *a); X509_EXTENSION *d2i_X509_EXTENSION(X509_EXTENSION * *a, const unsigned char * *in, long len); int i2d_X509_EXTENSION(X509_EXTENSION *a, unsigned char * *out); extern const ASN1_ITEM X509_EXTENSION_it; X509_EXTENSIONS *d2i_X509_EXTENSIONS(X509_EXTENSIONS * *a, const unsigned char * *in, long len); int i2d_X509_EXTENSIONS(X509_EXTENSIONS *a, unsigned char * *out); extern const ASN1_ITEM X509_EXTENSIONS_it; X509_NAME_ENTRY *X509_NAME_ENTRY_new(void); void X509_NAME_ENTRY_free(X509_NAME_ENTRY *a); X509_NAME_ENTRY *d2i_X509_NAME_ENTRY(X509_NAME_ENTRY * *a, const unsigned char * *in, long len); int i2d_X509_NAME_ENTRY(X509_NAME_ENTRY *a, unsigned char * *out); extern const ASN1_ITEM X509_NAME_ENTRY_it; X509_NAME *X509_NAME_new(void); void X509_NAME_free(X509_NAME *a); X509_NAME *d2i_X509_NAME(X509_NAME * *a, const unsigned char * *in, long len); int i2d_X509_NAME(X509_NAME *a, unsigned char * *out); extern const ASN1_ITEM X509_NAME_it; int X509_NAME_set(X509_NAME **xn, X509_NAME *name); X509_CINF *X509_CINF_new(void); void X509_CINF_free(X509_CINF *a); X509_CINF *d2i_X509_CINF(X509_CINF * *a, const unsigned char * *in, long len); int i2d_X509_CINF(X509_CINF *a, unsigned char * *out); extern const ASN1_ITEM X509_CINF_it; X509 *X509_new(void); void X509_free(X509 *a); X509 *d2i_X509(X509 * *a, const unsigned char * *in, long len); int i2d_X509(X509 *a, unsigned char * *out); extern const ASN1_ITEM X509_it; X509_CERT_AUX *X509_CERT_AUX_new(void); void X509_CERT_AUX_free(X509_CERT_AUX *a); X509_CERT_AUX *d2i_X509_CERT_AUX(X509_CERT_AUX * *a, const unsigned char * *in, long len); int i2d_X509_CERT_AUX(X509_CERT_AUX *a, unsigned char * *out); extern const ASN1_ITEM X509_CERT_AUX_it; X509_CERT_PAIR *X509_CERT_PAIR_new(void); void X509_CERT_PAIR_free(X509_CERT_PAIR *a); X509_CERT_PAIR *d2i_X509_CERT_PAIR(X509_CERT_PAIR * *a, const unsigned char * *in, long len); int i2d_X509_CERT_PAIR(X509_CERT_PAIR *a, unsigned char * *out); extern const ASN1_ITEM X509_CERT_PAIR_it; int X509_get_ex_new_index(long argl, void *argp, CRYPTO_EX_new *new_func, CRYPTO_EX_dup *dup_func, CRYPTO_EX_free *free_func); int X509_set_ex_data(X509 *r, int idx, void *arg); void *X509_get_ex_data(X509 *r, int idx); int i2d_X509_AUX(X509 *a, unsigned char **pp); X509 *d2i_X509_AUX(X509 **a, const unsigned char **pp, long length); int X509_alias_set1(X509 *x, unsigned char *name, int len); int X509_keyid_set1(X509 *x, unsigned char *id, int len); unsigned char *X509_alias_get0(X509 *x, int *len); unsigned char *X509_keyid_get0(X509 *x, int *len); int (*X509_TRUST_set_default(int (*trust) (int, X509 *, int))) (int, X509 *, int); int X509_TRUST_set(int *t, int trust); int X509_add1_trust_object(X509 *x, ASN1_OBJECT *obj); int X509_add1_reject_object(X509 *x, ASN1_OBJECT *obj); void X509_trust_clear(X509 *x); void X509_reject_clear(X509 *x); X509_REVOKED *X509_REVOKED_new(void); void X509_REVOKED_free(X509_REVOKED *a); X509_REVOKED *d2i_X509_REVOKED(X509_REVOKED * *a, const unsigned char * *in, long len); int i2d_X509_REVOKED(X509_REVOKED *a, unsigned char * *out); extern const ASN1_ITEM X509_REVOKED_it; X509_CRL_INFO *X509_CRL_INFO_new(void); void X509_CRL_INFO_free(X509_CRL_INFO *a); X509_CRL_INFO *d2i_X509_CRL_INFO(X509_CRL_INFO * *a, const unsigned char * *in, long len); int i2d_X509_CRL_INFO(X509_CRL_INFO *a, unsigned char * *out); extern const ASN1_ITEM X509_CRL_INFO_it; X509_CRL *X509_CRL_new(void); void X509_CRL_free(X509_CRL *a); X509_CRL *d2i_X509_CRL(X509_CRL * *a, const unsigned char * *in, long len); int i2d_X509_CRL(X509_CRL *a, unsigned char * *out); extern const ASN1_ITEM X509_CRL_it; int X509_CRL_add0_revoked(X509_CRL *crl, X509_REVOKED *rev); X509_PKEY *X509_PKEY_new(void); void X509_PKEY_free(X509_PKEY *a); int i2d_X509_PKEY(X509_PKEY *a, unsigned char **pp); X509_PKEY *d2i_X509_PKEY(X509_PKEY **a, const unsigned char **pp, long length); NETSCAPE_SPKI *NETSCAPE_SPKI_new(void); void NETSCAPE_SPKI_free(NETSCAPE_SPKI *a); NETSCAPE_SPKI *d2i_NETSCAPE_SPKI(NETSCAPE_SPKI * *a, const unsigned char * *in, long len); int i2d_NETSCAPE_SPKI(NETSCAPE_SPKI *a, unsigned char * *out); extern const ASN1_ITEM NETSCAPE_SPKI_it; NETSCAPE_SPKAC *NETSCAPE_SPKAC_new(void); void NETSCAPE_SPKAC_free(NETSCAPE_SPKAC *a); NETSCAPE_SPKAC *d2i_NETSCAPE_SPKAC(NETSCAPE_SPKAC * *a, const unsigned char * *in, long len); int i2d_NETSCAPE_SPKAC(NETSCAPE_SPKAC *a, unsigned char * *out); extern const ASN1_ITEM NETSCAPE_SPKAC_it; NETSCAPE_CERT_SEQUENCE *NETSCAPE_CERT_SEQUENCE_new(void); void NETSCAPE_CERT_SEQUENCE_free(NETSCAPE_CERT_SEQUENCE *a); NETSCAPE_CERT_SEQUENCE *d2i_NETSCAPE_CERT_SEQUENCE(NETSCAPE_CERT_SEQUENCE * *a, const unsigned char * *in, long len); int i2d_NETSCAPE_CERT_SEQUENCE(NETSCAPE_CERT_SEQUENCE *a, unsigned char * *out); extern const ASN1_ITEM NETSCAPE_CERT_SEQUENCE_it; X509_INFO *X509_INFO_new(void); void X509_INFO_free(X509_INFO *a); char *X509_NAME_oneline(X509_NAME *a, char *buf, int size); int ASN1_verify(i2d_of_void *i2d, X509_ALGOR *algor1, ASN1_BIT_STRING *signature, char *data, EVP_PKEY *pkey); int ASN1_digest(i2d_of_void *i2d, const EVP_MD *type, char *data, unsigned char *md, unsigned int *len); int ASN1_sign(i2d_of_void *i2d, X509_ALGOR *algor1, X509_ALGOR *algor2, ASN1_BIT_STRING *signature, char *data, EVP_PKEY *pkey, const EVP_MD *type); int ASN1_item_digest(const ASN1_ITEM *it, const EVP_MD *type, void *data, unsigned char *md, unsigned int *len); int ASN1_item_verify(const ASN1_ITEM *it, X509_ALGOR *algor1, ASN1_BIT_STRING *signature, void *data, EVP_PKEY *pkey); int ASN1_item_sign(const ASN1_ITEM *it, X509_ALGOR *algor1, X509_ALGOR *algor2, ASN1_BIT_STRING *signature, void *data, EVP_PKEY *pkey, const EVP_MD *type); int X509_set_version(X509 *x, long version); int X509_set_serialNumber(X509 *x, ASN1_INTEGER *serial); ASN1_INTEGER *X509_get_serialNumber(X509 *x); int X509_set_issuer_name(X509 *x, X509_NAME *name); X509_NAME *X509_get_issuer_name(X509 *a); int X509_set_subject_name(X509 *x, X509_NAME *name); X509_NAME *X509_get_subject_name(X509 *a); int X509_set_notBefore(X509 *x, ASN1_TIME *tm); int X509_set_notAfter(X509 *x, ASN1_TIME *tm); int X509_set_pubkey(X509 *x, EVP_PKEY *pkey); EVP_PKEY *X509_get_pubkey(X509 *x); ASN1_BIT_STRING *X509_get0_pubkey_bitstr(const X509 *x); int X509_certificate_type(X509 *x, EVP_PKEY *pubkey ); int X509_REQ_set_version(X509_REQ *x, long version); int X509_REQ_set_subject_name(X509_REQ *req, X509_NAME *name); int X509_REQ_set_pubkey(X509_REQ *x, EVP_PKEY *pkey); EVP_PKEY *X509_REQ_get_pubkey(X509_REQ *req); int X509_REQ_extension_nid(int nid); int *X509_REQ_get_extension_nids(void); void X509_REQ_set_extension_nids(int *nids); STACK *X509_REQ_get_extensions(X509_REQ *req); int X509_REQ_add_extensions_nid(X509_REQ *req, STACK *exts, int nid); int X509_REQ_add_extensions(X509_REQ *req, STACK *exts); int X509_REQ_get_attr_count(const X509_REQ *req); int X509_REQ_get_attr_by_NID(const X509_REQ *req, int nid, int lastpos); int X509_REQ_get_attr_by_OBJ(const X509_REQ *req, ASN1_OBJECT *obj, int lastpos); X509_ATTRIBUTE *X509_REQ_get_attr(const X509_REQ *req, int loc); X509_ATTRIBUTE *X509_REQ_delete_attr(X509_REQ *req, int loc); int X509_REQ_add1_attr(X509_REQ *req, X509_ATTRIBUTE *attr); int X509_REQ_add1_attr_by_OBJ(X509_REQ *req, const ASN1_OBJECT *obj, int type, const unsigned char *bytes, int len); int X509_REQ_add1_attr_by_NID(X509_REQ *req, int nid, int type, const unsigned char *bytes, int len); int X509_REQ_add1_attr_by_txt(X509_REQ *req, const char *attrname, int type, const unsigned char *bytes, int len); int X509_CRL_set_version(X509_CRL *x, long version); int X509_CRL_set_issuer_name(X509_CRL *x, X509_NAME *name); int X509_CRL_set_lastUpdate(X509_CRL *x, ASN1_TIME *tm); int X509_CRL_set_nextUpdate(X509_CRL *x, ASN1_TIME *tm); int X509_CRL_sort(X509_CRL *crl); int X509_REVOKED_set_serialNumber(X509_REVOKED *x, ASN1_INTEGER *serial); int X509_REVOKED_set_revocationDate(X509_REVOKED *r, ASN1_TIME *tm); int X509_REQ_check_private_key(X509_REQ *x509, EVP_PKEY *pkey); int X509_check_private_key(X509 *x509, EVP_PKEY *pkey); int X509_issuer_and_serial_cmp(const X509 *a, const X509 *b); unsigned long X509_issuer_and_serial_hash(X509 *a); int X509_issuer_name_cmp(const X509 *a, const X509 *b); unsigned long X509_issuer_name_hash(X509 *a); int X509_subject_name_cmp(const X509 *a, const X509 *b); unsigned long X509_subject_name_hash(X509 *x); int X509_cmp(const X509 *a, const X509 *b); int X509_NAME_cmp(const X509_NAME *a, const X509_NAME *b); unsigned long X509_NAME_hash(X509_NAME *x); int X509_CRL_cmp(const X509_CRL *a, const X509_CRL *b); int X509_print_ex_fp(FILE *bp, X509 *x, unsigned long nmflag, unsigned long cflag); int X509_print_fp(FILE *bp, X509 *x); int X509_CRL_print_fp(FILE *bp, X509_CRL *x); int X509_REQ_print_fp(FILE *bp, X509_REQ *req); int X509_NAME_print_ex_fp(FILE *fp, X509_NAME *nm, int indent, unsigned long flags); int X509_NAME_print(BIO *bp, X509_NAME *name, int obase); int X509_NAME_print_ex(BIO *out, X509_NAME *nm, int indent, unsigned long flags); int X509_print_ex(BIO *bp, X509 *x, unsigned long nmflag, unsigned long cflag); int X509_print(BIO *bp, X509 *x); int X509_ocspid_print(BIO *bp, X509 *x); int X509_CERT_AUX_print(BIO *bp, X509_CERT_AUX *x, int indent); int X509_CRL_print(BIO *bp, X509_CRL *x); int X509_REQ_print_ex(BIO *bp, X509_REQ *x, unsigned long nmflag, unsigned long cflag); int X509_REQ_print(BIO *bp, X509_REQ *req); int X509_NAME_entry_count(X509_NAME *name); int X509_NAME_get_text_by_NID(X509_NAME *name, int nid, char *buf, int len); int X509_NAME_get_text_by_OBJ(X509_NAME *name, ASN1_OBJECT *obj, char *buf, int len); int X509_NAME_get_index_by_NID(X509_NAME *name, int nid, int lastpos); int X509_NAME_get_index_by_OBJ(X509_NAME *name, ASN1_OBJECT *obj, int lastpos); X509_NAME_ENTRY *X509_NAME_get_entry(X509_NAME *name, int loc); X509_NAME_ENTRY *X509_NAME_delete_entry(X509_NAME *name, int loc); int X509_NAME_add_entry(X509_NAME *name, X509_NAME_ENTRY *ne, int loc, int set); int X509_NAME_add_entry_by_OBJ(X509_NAME *name, ASN1_OBJECT *obj, int type, unsigned char *bytes, int len, int loc, int set); int X509_NAME_add_entry_by_NID(X509_NAME *name, int nid, int type, unsigned char *bytes, int len, int loc, int set); X509_NAME_ENTRY *X509_NAME_ENTRY_create_by_txt(X509_NAME_ENTRY **ne, const char *field, int type, const unsigned char *bytes, int len); X509_NAME_ENTRY *X509_NAME_ENTRY_create_by_NID(X509_NAME_ENTRY **ne, int nid, int type, unsigned char *bytes, int len); int X509_NAME_add_entry_by_txt(X509_NAME *name, const char *field, int type, const unsigned char *bytes, int len, int loc, int set); X509_NAME_ENTRY *X509_NAME_ENTRY_create_by_OBJ(X509_NAME_ENTRY **ne, ASN1_OBJECT *obj, int type, const unsigned char *bytes, int len); int X509_NAME_ENTRY_set_object(X509_NAME_ENTRY *ne, ASN1_OBJECT *obj); int X509_NAME_ENTRY_set_data(X509_NAME_ENTRY *ne, int type, const unsigned char *bytes, int len); ASN1_OBJECT *X509_NAME_ENTRY_get_object(X509_NAME_ENTRY *ne); ASN1_STRING *X509_NAME_ENTRY_get_data(X509_NAME_ENTRY *ne); int X509v3_get_ext_count(const STACK *x); int X509v3_get_ext_by_NID(const STACK *x, int nid, int lastpos); int X509v3_get_ext_by_OBJ(const STACK *x, ASN1_OBJECT *obj, int lastpos); int X509v3_get_ext_by_critical(const STACK *x, int crit, int lastpos); X509_EXTENSION *X509v3_get_ext(const STACK *x, int loc); X509_EXTENSION *X509v3_delete_ext(STACK *x, int loc); STACK *X509v3_add_ext(STACK **x, X509_EXTENSION *ex, int loc); int X509_get_ext_count(X509 *x); int X509_get_ext_by_NID(X509 *x, int nid, int lastpos); int X509_get_ext_by_OBJ(X509 *x, ASN1_OBJECT *obj, int lastpos); int X509_get_ext_by_critical(X509 *x, int crit, int lastpos); X509_EXTENSION *X509_get_ext(X509 *x, int loc); X509_EXTENSION *X509_delete_ext(X509 *x, int loc); int X509_add_ext(X509 *x, X509_EXTENSION *ex, int loc); void *X509_get_ext_d2i(X509 *x, int nid, int *crit, int *idx); int X509_add1_ext_i2d(X509 *x, int nid, void *value, int crit, unsigned long flags); int X509_CRL_get_ext_count(X509_CRL *x); int X509_CRL_get_ext_by_NID(X509_CRL *x, int nid, int lastpos); int X509_CRL_get_ext_by_OBJ(X509_CRL *x, ASN1_OBJECT *obj, int lastpos); int X509_CRL_get_ext_by_critical(X509_CRL *x, int crit, int lastpos); X509_EXTENSION *X509_CRL_get_ext(X509_CRL *x, int loc); X509_EXTENSION *X509_CRL_delete_ext(X509_CRL *x, int loc); int X509_CRL_add_ext(X509_CRL *x, X509_EXTENSION *ex, int loc); void *X509_CRL_get_ext_d2i(X509_CRL *x, int nid, int *crit, int *idx); int X509_CRL_add1_ext_i2d(X509_CRL *x, int nid, void *value, int crit, unsigned long flags); int X509_REVOKED_get_ext_count(X509_REVOKED *x); int X509_REVOKED_get_ext_by_NID(X509_REVOKED *x, int nid, int lastpos); int X509_REVOKED_get_ext_by_OBJ(X509_REVOKED *x, ASN1_OBJECT *obj, int lastpos); int X509_REVOKED_get_ext_by_critical(X509_REVOKED *x, int crit, int lastpos); X509_EXTENSION *X509_REVOKED_get_ext(X509_REVOKED *x, int loc); X509_EXTENSION *X509_REVOKED_delete_ext(X509_REVOKED *x, int loc); int X509_REVOKED_add_ext(X509_REVOKED *x, X509_EXTENSION *ex, int loc); void *X509_REVOKED_get_ext_d2i(X509_REVOKED *x, int nid, int *crit, int *idx); int X509_REVOKED_add1_ext_i2d(X509_REVOKED *x, int nid, void *value, int crit, unsigned long flags); X509_EXTENSION *X509_EXTENSION_create_by_NID(X509_EXTENSION **ex, int nid, int crit, ASN1_OCTET_STRING *data); X509_EXTENSION *X509_EXTENSION_create_by_OBJ(X509_EXTENSION **ex, ASN1_OBJECT *obj, int crit, ASN1_OCTET_STRING *data); int X509_EXTENSION_set_object(X509_EXTENSION *ex, ASN1_OBJECT *obj); int X509_EXTENSION_set_critical(X509_EXTENSION *ex, int crit); int X509_EXTENSION_set_data(X509_EXTENSION *ex, ASN1_OCTET_STRING *data); ASN1_OBJECT *X509_EXTENSION_get_object(X509_EXTENSION *ex); ASN1_OCTET_STRING *X509_EXTENSION_get_data(X509_EXTENSION *ne); int X509_EXTENSION_get_critical(X509_EXTENSION *ex); int X509at_get_attr_count(const STACK *x); int X509at_get_attr_by_NID(const STACK *x, int nid, int lastpos); int X509at_get_attr_by_OBJ(const STACK *sk, ASN1_OBJECT *obj, int lastpos); X509_ATTRIBUTE *X509at_get_attr(const STACK *x, int loc); X509_ATTRIBUTE *X509at_delete_attr(STACK *x, int loc); STACK *X509at_add1_attr(STACK **x, X509_ATTRIBUTE *attr); STACK *X509at_add1_attr_by_OBJ(STACK **x, const ASN1_OBJECT *obj, int type, const unsigned char *bytes, int len); STACK *X509at_add1_attr_by_NID(STACK **x, int nid, int type, const unsigned char *bytes, int len); STACK *X509at_add1_attr_by_txt(STACK **x, const char *attrname, int type, const unsigned char *bytes, int len); void *X509at_get0_data_by_OBJ(STACK *x, ASN1_OBJECT *obj, int lastpos, int type); X509_ATTRIBUTE *X509_ATTRIBUTE_create_by_NID(X509_ATTRIBUTE **attr, int nid, int atrtype, const void *data, int len); X509_ATTRIBUTE *X509_ATTRIBUTE_create_by_OBJ(X509_ATTRIBUTE **attr, const ASN1_OBJECT *obj, int atrtype, const void *data, int len); X509_ATTRIBUTE *X509_ATTRIBUTE_create_by_txt(X509_ATTRIBUTE **attr, const char *atrname, int type, const unsigned char *bytes, int len); int X509_ATTRIBUTE_set1_object(X509_ATTRIBUTE *attr, const ASN1_OBJECT *obj); int X509_ATTRIBUTE_set1_data(X509_ATTRIBUTE *attr, int attrtype, const void *data, int len); void *X509_ATTRIBUTE_get0_data(X509_ATTRIBUTE *attr, int idx, int atrtype, void *data); int X509_ATTRIBUTE_count(X509_ATTRIBUTE *attr); ASN1_OBJECT *X509_ATTRIBUTE_get0_object(X509_ATTRIBUTE *attr); ASN1_TYPE *X509_ATTRIBUTE_get0_type(X509_ATTRIBUTE *attr, int idx); int EVP_PKEY_get_attr_count(const EVP_PKEY *key); int EVP_PKEY_get_attr_by_NID(const EVP_PKEY *key, int nid, int lastpos); int EVP_PKEY_get_attr_by_OBJ(const EVP_PKEY *key, ASN1_OBJECT *obj, int lastpos); X509_ATTRIBUTE *EVP_PKEY_get_attr(const EVP_PKEY *key, int loc); X509_ATTRIBUTE *EVP_PKEY_delete_attr(EVP_PKEY *key, int loc); int EVP_PKEY_add1_attr(EVP_PKEY *key, X509_ATTRIBUTE *attr); int EVP_PKEY_add1_attr_by_OBJ(EVP_PKEY *key, const ASN1_OBJECT *obj, int type, const unsigned char *bytes, int len); int EVP_PKEY_add1_attr_by_NID(EVP_PKEY *key, int nid, int type, const unsigned char *bytes, int len); int EVP_PKEY_add1_attr_by_txt(EVP_PKEY *key, const char *attrname, int type, const unsigned char *bytes, int len); int X509_verify_cert(X509_STORE_CTX *ctx); X509 *X509_find_by_issuer_and_serial(STACK *sk, X509_NAME *name, ASN1_INTEGER *serial); X509 *X509_find_by_subject(STACK *sk, X509_NAME *name); PBEPARAM *PBEPARAM_new(void); void PBEPARAM_free(PBEPARAM *a); PBEPARAM *d2i_PBEPARAM(PBEPARAM * *a, const unsigned char * *in, long len); int i2d_PBEPARAM(PBEPARAM *a, unsigned char * *out); extern const ASN1_ITEM PBEPARAM_it; PBE2PARAM *PBE2PARAM_new(void); void PBE2PARAM_free(PBE2PARAM *a); PBE2PARAM *d2i_PBE2PARAM(PBE2PARAM * *a, const unsigned char * *in, long len); int i2d_PBE2PARAM(PBE2PARAM *a, unsigned char * *out); extern const ASN1_ITEM PBE2PARAM_it; PBKDF2PARAM *PBKDF2PARAM_new(void); void PBKDF2PARAM_free(PBKDF2PARAM *a); PBKDF2PARAM *d2i_PBKDF2PARAM(PBKDF2PARAM * *a, const unsigned char * *in, long len); int i2d_PBKDF2PARAM(PBKDF2PARAM *a, unsigned char * *out); extern const ASN1_ITEM PBKDF2PARAM_it; X509_ALGOR *PKCS5_pbe_set(int alg, int iter, unsigned char *salt, int saltlen); X509_ALGOR *PKCS5_pbe2_set(const EVP_CIPHER *cipher, int iter, unsigned char *salt, int saltlen); PKCS8_PRIV_KEY_INFO *PKCS8_PRIV_KEY_INFO_new(void); void PKCS8_PRIV_KEY_INFO_free(PKCS8_PRIV_KEY_INFO *a); PKCS8_PRIV_KEY_INFO *d2i_PKCS8_PRIV_KEY_INFO(PKCS8_PRIV_KEY_INFO * *a, const unsigned char * *in, long len); int i2d_PKCS8_PRIV_KEY_INFO(PKCS8_PRIV_KEY_INFO *a, unsigned char * *out); extern const ASN1_ITEM PKCS8_PRIV_KEY_INFO_it; EVP_PKEY *EVP_PKCS82PKEY(PKCS8_PRIV_KEY_INFO *p8); PKCS8_PRIV_KEY_INFO *EVP_PKEY2PKCS8(EVP_PKEY *pkey); PKCS8_PRIV_KEY_INFO *EVP_PKEY2PKCS8_broken(EVP_PKEY *pkey, int broken); PKCS8_PRIV_KEY_INFO *PKCS8_set_broken(PKCS8_PRIV_KEY_INFO *p8, int broken); int X509_check_trust(X509 *x, int id, int flags); int X509_TRUST_get_count(void); X509_TRUST *X509_TRUST_get0(int idx); int X509_TRUST_get_by_id(int id); int X509_TRUST_add(int id, int flags, int (*ck) (X509_TRUST *, X509 *, int), char *name, int arg1, void *arg2); void X509_TRUST_cleanup(void); int X509_TRUST_get_flags(X509_TRUST *xp); char *X509_TRUST_get0_name(X509_TRUST *xp); int X509_TRUST_get_trust(X509_TRUST *xp); void ERR_load_X509_strings(void); #line 1308 "/usr/include/openssl/x509.h" #line 1333 "/usr/include/openssl/x509.h" #line 184 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/pem.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 63 "/usr/include/openssl/pem.h" #line 1 "/usr/include/openssl/pem2.h" #line 72 "/usr/include/openssl/pem.h" #line 97 "/usr/include/openssl/pem.h" #line 106 "/usr/include/openssl/pem.h" #line 113 "/usr/include/openssl/pem.h" #line 138 "/usr/include/openssl/pem.h" typedef struct PEM_Encode_Seal_st { EVP_ENCODE_CTX encode; EVP_MD_CTX md; EVP_CIPHER_CTX cipher; } PEM_ENCODE_SEAL_CTX; typedef struct pem_recip_st { char *name; X509_NAME *dn; int cipher; int key_enc; } PEM_USER; typedef struct pem_ctx_st { int type; struct { int version; int mode; } proc_type; char *domain; struct { int cipher; } DEK_info; PEM_USER *originator; int num_recipient; PEM_USER **recipient; STACK *x509_chain; EVP_MD *md; int md_enc; int md_len; char *md_data; EVP_CIPHER *dec; int key_len; unsigned char *key; int data_enc; int data_len; unsigned char *data; } PEM_CTX; #line 221 "/usr/include/openssl/pem.h" #line 230 "/usr/include/openssl/pem.h" #line 239 "/usr/include/openssl/pem.h" #line 248 "/usr/include/openssl/pem.h" #line 259 "/usr/include/openssl/pem.h" #line 270 "/usr/include/openssl/pem.h" #line 281 "/usr/include/openssl/pem.h" #line 290 "/usr/include/openssl/pem.h" #line 299 "/usr/include/openssl/pem.h" #line 309 "/usr/include/openssl/pem.h" #line 319 "/usr/include/openssl/pem.h" #line 361 "/usr/include/openssl/pem.h" #line 541 "/usr/include/openssl/pem.h" typedef int pem_password_cb (char *buf, int size, int rwflag, void *userdata); int PEM_get_EVP_CIPHER_INFO(char *header, EVP_CIPHER_INFO *cipher); int PEM_do_header(EVP_CIPHER_INFO *cipher, unsigned char *data, long *len, pem_password_cb *callback, void *u); int PEM_read_bio(BIO *bp, char **name, char **header, unsigned char **data, long *len); int PEM_write_bio(BIO *bp, const char *name, char *hdr, unsigned char *data, long len); int PEM_bytes_read_bio(unsigned char **pdata, long *plen, char **pnm, const char *name, BIO *bp, pem_password_cb *cb, void *u); void *PEM_ASN1_read_bio(d2i_of_void *d2i, const char *name, BIO *bp, void **x, pem_password_cb *cb, void *u); int PEM_ASN1_write_bio(i2d_of_void *i2d, const char *name, BIO *bp, char *x, const EVP_CIPHER *enc, unsigned char *kstr, int klen, pem_password_cb *cb, void *u); STACK *PEM_X509_INFO_read_bio(BIO *bp, STACK *sk, pem_password_cb *cb, void *u); int PEM_X509_INFO_write_bio(BIO *bp, X509_INFO *xi, EVP_CIPHER *enc, unsigned char *kstr, int klen, pem_password_cb *cd, void *u); int PEM_read(FILE *fp, char **name, char **header, unsigned char **data, long *len); int PEM_write(FILE *fp, char *name, char *hdr, unsigned char *data, long len); void *PEM_ASN1_read(d2i_of_void *d2i, const char *name, FILE *fp, void **x, pem_password_cb *cb, void *u); int PEM_ASN1_write(i2d_of_void *i2d, const char *name, FILE *fp, char *x, const EVP_CIPHER *enc, unsigned char *kstr, int klen, pem_password_cb *callback, void *u); STACK *PEM_X509_INFO_read(FILE *fp, STACK *sk, pem_password_cb *cb, void *u); int PEM_SealInit(PEM_ENCODE_SEAL_CTX *ctx, EVP_CIPHER *type, EVP_MD *md_type, unsigned char **ek, int *ekl, unsigned char *iv, EVP_PKEY **pubk, int npubk); void PEM_SealUpdate(PEM_ENCODE_SEAL_CTX *ctx, unsigned char *out, int *outl, unsigned char *in, int inl); int PEM_SealFinal(PEM_ENCODE_SEAL_CTX *ctx, unsigned char *sig, int *sigl, unsigned char *out, int *outl, EVP_PKEY *priv); void PEM_SignInit(EVP_MD_CTX *ctx, EVP_MD *type); void PEM_SignUpdate(EVP_MD_CTX *ctx, unsigned char *d, unsigned int cnt); int PEM_SignFinal(EVP_MD_CTX *ctx, unsigned char *sigret, unsigned int *siglen, EVP_PKEY *pkey); int PEM_def_callback(char *buf, int num, int w, void *key); void PEM_proc_type(char *buf, int type); void PEM_dek_info(char *buf, const char *type, int len, char *str); #line 1 "/usr/include/openssl/symhacks.h" #line 436 "/usr/include/openssl/symhacks.h" #line 619 "/usr/include/openssl/pem.h" X509 *PEM_read_bio_X509(BIO *bp, X509 * *x, pem_password_cb *cb, void *u); X509 *PEM_read_X509(FILE *fp, X509 * *x, pem_password_cb *cb, void *u); int PEM_write_bio_X509(BIO *bp, X509 *x); int PEM_write_X509(FILE *fp, X509 *x); X509 *PEM_read_bio_X509_AUX(BIO *bp, X509 * *x, pem_password_cb *cb, void *u); X509 *PEM_read_X509_AUX(FILE *fp, X509 * *x, pem_password_cb *cb, void *u); int PEM_write_bio_X509_AUX(BIO *bp, X509 *x); int PEM_write_X509_AUX(FILE *fp, X509 *x); X509_CERT_PAIR *PEM_read_bio_X509_CERT_PAIR(BIO *bp, X509_CERT_PAIR * *x, pem_password_cb *cb, void *u); X509_CERT_PAIR *PEM_read_X509_CERT_PAIR(FILE *fp, X509_CERT_PAIR * *x, pem_password_cb *cb, void *u); int PEM_write_bio_X509_CERT_PAIR(BIO *bp, X509_CERT_PAIR *x); int PEM_write_X509_CERT_PAIR(FILE *fp, X509_CERT_PAIR *x); X509_REQ *PEM_read_bio_X509_REQ(BIO *bp, X509_REQ * *x, pem_password_cb *cb, void *u); X509_REQ *PEM_read_X509_REQ(FILE *fp, X509_REQ * *x, pem_password_cb *cb, void *u); int PEM_write_bio_X509_REQ(BIO *bp, X509_REQ *x); int PEM_write_X509_REQ(FILE *fp, X509_REQ *x); int PEM_write_bio_X509_REQ_NEW(BIO *bp, X509_REQ *x); int PEM_write_X509_REQ_NEW(FILE *fp, X509_REQ *x); X509_CRL *PEM_read_bio_X509_CRL(BIO *bp, X509_CRL * *x, pem_password_cb *cb, void *u); X509_CRL *PEM_read_X509_CRL(FILE *fp, X509_CRL * *x, pem_password_cb *cb, void *u); int PEM_write_bio_X509_CRL(BIO *bp, X509_CRL *x); int PEM_write_X509_CRL(FILE *fp, X509_CRL *x); PKCS7 *PEM_read_bio_PKCS7(BIO *bp, PKCS7 * *x, pem_password_cb *cb, void *u); PKCS7 *PEM_read_PKCS7(FILE *fp, PKCS7 * *x, pem_password_cb *cb, void *u); int PEM_write_bio_PKCS7(BIO *bp, PKCS7 *x); int PEM_write_PKCS7(FILE *fp, PKCS7 *x); NETSCAPE_CERT_SEQUENCE *PEM_read_bio_NETSCAPE_CERT_SEQUENCE(BIO *bp, NETSCAPE_CERT_SEQUENCE * *x, pem_password_cb *cb, void *u); NETSCAPE_CERT_SEQUENCE *PEM_read_NETSCAPE_CERT_SEQUENCE(FILE *fp, NETSCAPE_CERT_SEQUENCE * *x, pem_password_cb *cb, void *u); int PEM_write_bio_NETSCAPE_CERT_SEQUENCE(BIO *bp, NETSCAPE_CERT_SEQUENCE *x); int PEM_write_NETSCAPE_CERT_SEQUENCE(FILE *fp, NETSCAPE_CERT_SEQUENCE *x); X509_SIG *PEM_read_bio_PKCS8(BIO *bp, X509_SIG * *x, pem_password_cb *cb, void *u); X509_SIG *PEM_read_PKCS8(FILE *fp, X509_SIG * *x, pem_password_cb *cb, void *u); int PEM_write_bio_PKCS8(BIO *bp, X509_SIG *x); int PEM_write_PKCS8(FILE *fp, X509_SIG *x); PKCS8_PRIV_KEY_INFO *PEM_read_bio_PKCS8_PRIV_KEY_INFO(BIO *bp, PKCS8_PRIV_KEY_INFO * *x, pem_password_cb *cb, void *u); PKCS8_PRIV_KEY_INFO *PEM_read_PKCS8_PRIV_KEY_INFO(FILE *fp, PKCS8_PRIV_KEY_INFO * *x, pem_password_cb *cb, void *u); int PEM_write_bio_PKCS8_PRIV_KEY_INFO(BIO *bp, PKCS8_PRIV_KEY_INFO *x); int PEM_write_PKCS8_PRIV_KEY_INFO(FILE *fp, PKCS8_PRIV_KEY_INFO *x); RSA *PEM_read_bio_RSAPrivateKey(BIO *bp, RSA * *x, pem_password_cb *cb, void *u); RSA *PEM_read_RSAPrivateKey(FILE *fp, RSA * *x, pem_password_cb *cb, void *u); int PEM_write_bio_RSAPrivateKey(BIO *bp, RSA *x, const EVP_CIPHER *enc, unsigned char *kstr, int klen, pem_password_cb *cb, void *u); int PEM_write_RSAPrivateKey(FILE *fp, RSA *x, const EVP_CIPHER *enc, unsigned char *kstr, int klen, pem_password_cb *cb, void *u); RSA *PEM_read_bio_RSAPublicKey(BIO *bp, RSA * *x, pem_password_cb *cb, void *u); RSA *PEM_read_RSAPublicKey(FILE *fp, RSA * *x, pem_password_cb *cb, void *u); int PEM_write_bio_RSAPublicKey(BIO *bp, const RSA *x); int PEM_write_RSAPublicKey(FILE *fp, const RSA *x); RSA *PEM_read_bio_RSA_PUBKEY(BIO *bp, RSA * *x, pem_password_cb *cb, void *u); RSA *PEM_read_RSA_PUBKEY(FILE *fp, RSA * *x, pem_password_cb *cb, void *u); int PEM_write_bio_RSA_PUBKEY(BIO *bp, RSA *x); int PEM_write_RSA_PUBKEY(FILE *fp, RSA *x); DSA *PEM_read_bio_DSAPrivateKey(BIO *bp, DSA * *x, pem_password_cb *cb, void *u); DSA *PEM_read_DSAPrivateKey(FILE *fp, DSA * *x, pem_password_cb *cb, void *u); int PEM_write_bio_DSAPrivateKey(BIO *bp, DSA *x, const EVP_CIPHER *enc, unsigned char *kstr, int klen, pem_password_cb *cb, void *u); int PEM_write_DSAPrivateKey(FILE *fp, DSA *x, const EVP_CIPHER *enc, unsigned char *kstr, int klen, pem_password_cb *cb, void *u); DSA *PEM_read_bio_DSA_PUBKEY(BIO *bp, DSA * *x, pem_password_cb *cb, void *u); DSA *PEM_read_DSA_PUBKEY(FILE *fp, DSA * *x, pem_password_cb *cb, void *u); int PEM_write_bio_DSA_PUBKEY(BIO *bp, DSA *x); int PEM_write_DSA_PUBKEY(FILE *fp, DSA *x); DSA *PEM_read_bio_DSAparams(BIO *bp, DSA * *x, pem_password_cb *cb, void *u); DSA *PEM_read_DSAparams(FILE *fp, DSA * *x, pem_password_cb *cb, void *u); int PEM_write_bio_DSAparams(BIO *bp, const DSA *x); int PEM_write_DSAparams(FILE *fp, const DSA *x); DH *PEM_read_bio_DHparams(BIO *bp, DH * *x, pem_password_cb *cb, void *u); DH *PEM_read_DHparams(FILE *fp, DH * *x, pem_password_cb *cb, void *u); int PEM_write_bio_DHparams(BIO *bp, const DH *x); int PEM_write_DHparams(FILE *fp, const DH *x); EVP_PKEY *PEM_read_bio_PrivateKey(BIO *bp, EVP_PKEY * *x, pem_password_cb *cb, void *u); EVP_PKEY *PEM_read_PrivateKey(FILE *fp, EVP_PKEY * *x, pem_password_cb *cb, void *u); int PEM_write_bio_PrivateKey(BIO *bp, EVP_PKEY *x, const EVP_CIPHER *enc, unsigned char *kstr, int klen, pem_password_cb *cb, void *u); int PEM_write_PrivateKey(FILE *fp, EVP_PKEY *x, const EVP_CIPHER *enc, unsigned char *kstr, int klen, pem_password_cb *cb, void *u); EVP_PKEY *PEM_read_bio_PUBKEY(BIO *bp, EVP_PKEY * *x, pem_password_cb *cb, void *u); EVP_PKEY *PEM_read_PUBKEY(FILE *fp, EVP_PKEY * *x, pem_password_cb *cb, void *u); int PEM_write_bio_PUBKEY(BIO *bp, EVP_PKEY *x); int PEM_write_PUBKEY(FILE *fp, EVP_PKEY *x); int PEM_write_bio_PKCS8PrivateKey_nid(BIO *bp, EVP_PKEY *x, int nid, char *kstr, int klen, pem_password_cb *cb, void *u); int PEM_write_bio_PKCS8PrivateKey(BIO *, EVP_PKEY *, const EVP_CIPHER *, char *, int, pem_password_cb *, void *); int i2d_PKCS8PrivateKey_bio(BIO *bp, EVP_PKEY *x, const EVP_CIPHER *enc, char *kstr, int klen, pem_password_cb *cb, void *u); int i2d_PKCS8PrivateKey_nid_bio(BIO *bp, EVP_PKEY *x, int nid, char *kstr, int klen, pem_password_cb *cb, void *u); EVP_PKEY *d2i_PKCS8PrivateKey_bio(BIO *bp, EVP_PKEY **x, pem_password_cb *cb, void *u); int i2d_PKCS8PrivateKey_fp(FILE *fp, EVP_PKEY *x, const EVP_CIPHER *enc, char *kstr, int klen, pem_password_cb *cb, void *u); int i2d_PKCS8PrivateKey_nid_fp(FILE *fp, EVP_PKEY *x, int nid, char *kstr, int klen, pem_password_cb *cb, void *u); int PEM_write_PKCS8PrivateKey_nid(FILE *fp, EVP_PKEY *x, int nid, char *kstr, int klen, pem_password_cb *cb, void *u); EVP_PKEY *d2i_PKCS8PrivateKey_fp(FILE *fp, EVP_PKEY **x, pem_password_cb *cb, void *u); int PEM_write_PKCS8PrivateKey(FILE *fp, EVP_PKEY *x, const EVP_CIPHER *enc, char *kstr, int klen, pem_password_cb *cd, void *u); void ERR_load_PEM_strings(void); #line 715 "/usr/include/openssl/pem.h" #line 733 "/usr/include/openssl/pem.h" #line 190 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/hmac.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 62 "/usr/include/openssl/hmac.h" typedef struct hmac_ctx_st { const EVP_MD *md; EVP_MD_CTX md_ctx; EVP_MD_CTX i_ctx; EVP_MD_CTX o_ctx; unsigned int key_length; unsigned char key[128]; } HMAC_CTX; void HMAC_CTX_init(HMAC_CTX *ctx); void HMAC_CTX_cleanup(HMAC_CTX *ctx); void HMAC_Init(HMAC_CTX *ctx, const void *key, int len, const EVP_MD *md); void HMAC_Init_ex(HMAC_CTX *ctx, const void *key, int len, const EVP_MD *md, ENGINE *impl); void HMAC_Update(HMAC_CTX *ctx, const unsigned char *data, size_t len); void HMAC_Final(HMAC_CTX *ctx, unsigned char *md, unsigned int *len); unsigned char *HMAC(const EVP_MD *evp_md, const void *key, int key_len, const unsigned char *d, size_t n, unsigned char *md, unsigned int *md_len); void HMAC_CTX_set_flags(HMAC_CTX *ctx, unsigned long flags); #line 191 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/kssl.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 68 "/usr/include/openssl/kssl.h" #line 193 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/symhacks.h" #line 436 "/usr/include/openssl/symhacks.h" #line 195 "/usr/include/openssl/ssl.h" #line 218 "/usr/include/openssl/ssl.h" #line 230 "/usr/include/openssl/ssl.h" #line 237 "/usr/include/openssl/ssl.h" #line 245 "/usr/include/openssl/ssl.h" #line 262 "/usr/include/openssl/ssl.h" #line 304 "/usr/include/openssl/ssl.h" typedef struct ssl_st *ssl_crock_st; typedef struct tls_session_ticket_ext_st TLS_SESSION_TICKET_EXT; typedef struct ssl_cipher_st { int valid; const char *name; unsigned long id; unsigned long algorithms; unsigned long algo_strength; unsigned long algorithm2; int strength_bits; int alg_bits; unsigned long mask; unsigned long mask_strength; } SSL_CIPHER; typedef int (*tls_session_ticket_ext_cb_fn)(SSL *s, const unsigned char *data, int len, void *arg); typedef int (*tls_session_secret_cb_fn)(SSL *s, void *secret, int *secret_len, STACK *peer_ciphers, SSL_CIPHER **cipher, void *arg); typedef struct ssl_method_st { int version; int (*ssl_new) (SSL *s); void (*ssl_clear) (SSL *s); void (*ssl_free) (SSL *s); int (*ssl_accept) (SSL *s); int (*ssl_connect) (SSL *s); int (*ssl_read) (SSL *s, void *buf, int len); int (*ssl_peek) (SSL *s, void *buf, int len); int (*ssl_write) (SSL *s, const void *buf, int len); int (*ssl_shutdown) (SSL *s); int (*ssl_renegotiate) (SSL *s); int (*ssl_renegotiate_check) (SSL *s); long (*ssl_get_message) (SSL *s, int st1, int stn, int mt, long max, int *ok); int (*ssl_read_bytes) (SSL *s, int type, unsigned char *buf, int len, int peek); int (*ssl_write_bytes) (SSL *s, int type, const void *buf_, int len); int (*ssl_dispatch_alert) (SSL *s); long (*ssl_ctrl) (SSL *s, int cmd, long larg, void *parg); long (*ssl_ctx_ctrl) (SSL_CTX *ctx, int cmd, long larg, void *parg); SSL_CIPHER *(*get_cipher_by_char) (const unsigned char *ptr); int (*put_cipher_by_char) (const SSL_CIPHER *cipher, unsigned char *ptr); int (*ssl_pending) (const SSL *s); int (*num_ciphers) (void); SSL_CIPHER *(*get_cipher) (unsigned ncipher); struct ssl_method_st *(*get_ssl_method) (int version); long (*get_timeout) (void); struct ssl3_enc_method *ssl3_enc; int (*ssl_version) (void); long (*ssl_callback_ctrl) (SSL *s, int cb_id, void (*fp) (void)); long (*ssl_ctx_callback_ctrl) (SSL_CTX *s, int cb_id, void (*fp) (void)); } SSL_METHOD; typedef struct ssl_session_st { int ssl_version; unsigned int key_arg_length; unsigned char key_arg[8]; int master_key_length; unsigned char master_key[48]; unsigned int session_id_length; unsigned char session_id[32]; unsigned int sid_ctx_length; unsigned char sid_ctx[32]; int not_resumable; struct sess_cert_st *sess_cert; X509 *peer; long verify_result; int references; long timeout; long time; int compress_meth; SSL_CIPHER *cipher; unsigned long cipher_id; STACK *ciphers; CRYPTO_EX_DATA ex_data; struct ssl_session_st *prev, *next; char *tlsext_hostname; unsigned char *tlsext_tick; size_t tlsext_ticklen; long tlsext_tick_lifetime_hint; } SSL_SESSION; #line 499 "/usr/include/openssl/ssl.h" #line 608 "/usr/include/openssl/ssl.h" #line 623 "/usr/include/openssl/ssl.h" void SSL_CTX_set_msg_callback(SSL_CTX *ctx, void (*cb) (int write_p, int version, int content_type, const void *buf, size_t len, SSL *ssl, void *arg)); void SSL_set_msg_callback(SSL *ssl, void (*cb) (int write_p, int version, int content_type, const void *buf, size_t len, SSL *ssl, void *arg)); typedef int (*GEN_SESSION_CB) (const SSL *ssl, unsigned char *id, unsigned int *id_len); typedef struct ssl_comp_st { int id; const char *name; COMP_METHOD *method; } SSL_COMP; struct ssl_ctx_st { SSL_METHOD *method; STACK *cipher_list; STACK *cipher_list_by_id; struct x509_store_st *cert_store; struct lhash_st *sessions; unsigned long session_cache_size; struct ssl_session_st *session_cache_head; struct ssl_session_st *session_cache_tail; int session_cache_mode; long session_timeout; int (*new_session_cb) (struct ssl_st *ssl, SSL_SESSION *sess); void (*remove_session_cb) (struct ssl_ctx_st *ctx, SSL_SESSION *sess); SSL_SESSION *(*get_session_cb) (struct ssl_st *ssl, unsigned char *data, int len, int *copy); struct { int sess_connect; int sess_connect_renegotiate; int sess_connect_good; int sess_accept; int sess_accept_renegotiate; int sess_accept_good; int sess_miss; int sess_timeout; int sess_cache_full; int sess_hit; int sess_cb_hit; } stats; int references; int (*app_verify_callback) (X509_STORE_CTX *, void *); void *app_verify_arg; pem_password_cb *default_passwd_callback; void *default_passwd_callback_userdata; int (*client_cert_cb) (SSL *ssl, X509 **x509, EVP_PKEY **pkey); int (*app_gen_cookie_cb) (SSL *ssl, unsigned char *cookie, unsigned int *cookie_len); int (*app_verify_cookie_cb) (SSL *ssl, unsigned char *cookie, unsigned int cookie_len); CRYPTO_EX_DATA ex_data; const EVP_MD *rsa_md5; const EVP_MD *md5; const EVP_MD *sha1; STACK *extra_certs; STACK *comp_methods; void (*info_callback) (const SSL *ssl, int type, int val); STACK *client_CA; unsigned long options; unsigned long mode; long max_cert_list; struct cert_st *cert; int read_ahead; void (*msg_callback) (int write_p, int version, int content_type, const void *buf, size_t len, SSL *ssl, void *arg); void *msg_callback_arg; int verify_mode; unsigned int sid_ctx_length; unsigned char sid_ctx[32]; int (*default_verify_callback) (int ok, X509_STORE_CTX *ctx); GEN_SESSION_CB generate_session_id; X509_VERIFY_PARAM *param; int quiet_shutdown; ENGINE *client_cert_engine; int (*tlsext_servername_callback) (SSL *, int *, void *); void *tlsext_servername_arg; unsigned char tlsext_tick_key_name[16]; unsigned char tlsext_tick_hmac_key[16]; unsigned char tlsext_tick_aes_key[16]; int (*tlsext_ticket_key_cb) (SSL *ssl, unsigned char *name, unsigned char *iv, EVP_CIPHER_CTX *ectx, HMAC_CTX *hctx, int enc); int (*tlsext_status_cb) (SSL *ssl, void *arg); void *tlsext_status_arg; }; struct lhash_st *SSL_CTX_sessions(SSL_CTX *ctx); #line 879 "/usr/include/openssl/ssl.h" void SSL_CTX_sess_set_new_cb(SSL_CTX *ctx, int (*new_session_cb) (struct ssl_st *ssl, SSL_SESSION *sess)); int (*SSL_CTX_sess_get_new_cb(SSL_CTX *ctx)) (struct ssl_st *ssl, SSL_SESSION *sess); void SSL_CTX_sess_set_remove_cb(SSL_CTX *ctx, void (*remove_session_cb) (struct ssl_ctx_st *ctx, SSL_SESSION *sess)); void (*SSL_CTX_sess_get_remove_cb(SSL_CTX *ctx)) (struct ssl_ctx_st *ctx, SSL_SESSION *sess); void SSL_CTX_sess_set_get_cb(SSL_CTX *ctx, SSL_SESSION *(*get_session_cb) (struct ssl_st *ssl, unsigned char *data, int len, int *copy)); SSL_SESSION *(*SSL_CTX_sess_get_get_cb(SSL_CTX *ctx)) (struct ssl_st *ssl, unsigned char *Data, int len, int *copy); void SSL_CTX_set_info_callback(SSL_CTX *ctx, void (*cb) (const SSL *ssl, int type, int val)); void (*SSL_CTX_get_info_callback(SSL_CTX *ctx)) (const SSL *ssl, int type, int val); void SSL_CTX_set_client_cert_cb(SSL_CTX *ctx, int (*client_cert_cb) (SSL *ssl, X509 **x509, EVP_PKEY **pkey)); int (*SSL_CTX_get_client_cert_cb(SSL_CTX *ctx)) (SSL *ssl, X509 **x509, EVP_PKEY **pkey); int SSL_CTX_set_client_cert_engine(SSL_CTX *ctx, ENGINE *e); void SSL_CTX_set_cookie_generate_cb(SSL_CTX *ctx, int (*app_gen_cookie_cb) (SSL *ssl, unsigned char *cookie, unsigned int *cookie_len)); void SSL_CTX_set_cookie_verify_cb(SSL_CTX *ctx, int (*app_verify_cookie_cb) (SSL *ssl, unsigned char *cookie, unsigned int cookie_len)); struct ssl_st { int version; int type; SSL_METHOD *method; BIO *rbio; BIO *wbio; BIO *bbio; #line 966 "/usr/include/openssl/ssl.h" int rwstate; int in_handshake; int (*handshake_func) (SSL *); int server; int new_session; int quiet_shutdown; int shutdown; int state; int rstate; BUF_MEM *init_buf; void *init_msg; int init_num; int init_off; unsigned char *packet; unsigned int packet_length; struct ssl2_state_st *s2; struct ssl3_state_st *s3; struct dtls1_state_st *d1; int read_ahead; void (*msg_callback) (int write_p, int version, int content_type, const void *buf, size_t len, SSL *ssl, void *arg); void *msg_callback_arg; int hit; X509_VERIFY_PARAM *param; STACK *cipher_list; STACK *cipher_list_by_id; EVP_CIPHER_CTX *enc_read_ctx; const EVP_MD *read_hash; COMP_CTX *expand; EVP_CIPHER_CTX *enc_write_ctx; const EVP_MD *write_hash; COMP_CTX *compress; struct cert_st *cert; unsigned int sid_ctx_length; unsigned char sid_ctx[32]; SSL_SESSION *session; GEN_SESSION_CB generate_session_id; int verify_mode; int (*verify_callback) (int ok, X509_STORE_CTX *ctx); void (*info_callback) (const SSL *ssl, int type, int val); int error; int error_code; SSL_CTX *ctx; int debug; long verify_result; CRYPTO_EX_DATA ex_data; STACK *client_CA; int references; unsigned long options; unsigned long mode; long max_cert_list; int first_packet; int client_version; void (*tlsext_debug_cb) (SSL *s, int client_server, int type, unsigned char *data, int len, void *arg); void *tlsext_debug_arg; char *tlsext_hostname; int servername_done; int tlsext_status_type; int tlsext_status_expected; STACK *tlsext_ocsp_ids; X509_EXTENSIONS *tlsext_ocsp_exts; unsigned char *tlsext_ocsp_resp; int tlsext_ocsp_resplen; int tlsext_ticket_expected; TLS_SESSION_TICKET_EXT *tlsext_session_ticket; tls_session_ticket_ext_cb_fn tls_session_ticket_ext_cb; void *tls_session_ticket_ext_cb_arg; tls_session_secret_cb_fn tls_session_secret_cb; void *tls_session_secret_cb_arg; SSL_CTX *initial_ctx; }; #line 1 "/usr/include/openssl/ssl2.h" #line 83 "/usr/include/openssl/ssl2.h" #line 103 "/usr/include/openssl/ssl2.h" #line 119 "/usr/include/openssl/ssl2.h" #line 156 "/usr/include/openssl/ssl2.h" typedef struct ssl2_state_st { int three_byte_header; int clear_text; int escape; int ssl2_rollback; unsigned int wnum; int wpend_tot; const unsigned char *wpend_buf; int wpend_off; int wpend_len; int wpend_ret; int rbuf_left; int rbuf_offs; unsigned char *rbuf; unsigned char *wbuf; unsigned char *write_ptr; unsigned int padding; unsigned int rlength; int ract_data_length; unsigned int wlength; int wact_data_length; unsigned char *ract_data; unsigned char *wact_data; unsigned char *mac_data; unsigned char *read_key; unsigned char *write_key; unsigned int challenge_length; unsigned char challenge[32]; unsigned int conn_id_length; unsigned char conn_id[16]; unsigned int key_material_length; unsigned char key_material[24 * 2]; unsigned long read_sequence; unsigned long write_sequence; struct { unsigned int conn_id_length; unsigned int cert_type; unsigned int cert_length; unsigned int csl; unsigned int clear; unsigned int enc; unsigned char ccl[32]; unsigned int cipher_spec_length; unsigned int session_id_length; unsigned int clen; unsigned int rlen; } tmp; } SSL2_STATE; #line 236 "/usr/include/openssl/ssl2.h" #line 257 "/usr/include/openssl/ssl2.h" #line 1147 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/ssl3.h" #line 1 "/usr/include/openssl/ssl.h" #line 126 "/usr/include/openssl/ssl3.h" #line 1 "/usr/include/openssl/pq_compat.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 64 "/usr/include/openssl/pq_compat.h" #line 110 "/usr/include/openssl/pq_compat.h" #line 124 "/usr/include/openssl/pq_compat.h" #line 140 "/usr/include/openssl/pq_compat.h" #line 151 "/usr/include/openssl/pq_compat.h" #line 127 "/usr/include/openssl/ssl3.h" #line 154 "/usr/include/openssl/ssl3.h" #line 161 "/usr/include/openssl/ssl3.h" #line 168 "/usr/include/openssl/ssl3.h" #line 184 "/usr/include/openssl/ssl3.h" #line 196 "/usr/include/openssl/ssl3.h" #line 203 "/usr/include/openssl/ssl3.h" #line 214 "/usr/include/openssl/ssl3.h" #line 221 "/usr/include/openssl/ssl3.h" #line 228 "/usr/include/openssl/ssl3.h" #line 247 "/usr/include/openssl/ssl3.h" #line 254 "/usr/include/openssl/ssl3.h" #line 270 "/usr/include/openssl/ssl3.h" #line 280 "/usr/include/openssl/ssl3.h" #line 308 "/usr/include/openssl/ssl3.h" typedef struct ssl3_record_st { int type; unsigned int length; unsigned int off; unsigned char *data; unsigned char *input; unsigned char *comp; unsigned long epoch; unsigned long seq_num; } SSL3_RECORD; typedef struct ssl3_buffer_st { unsigned char *buf; size_t len; int offset; int left; } SSL3_BUFFER; #line 362 "/usr/include/openssl/ssl3.h" typedef struct ssl3_state_st { long flags; int delay_buf_pop_ret; unsigned char read_sequence[8]; unsigned char read_mac_secret[64]; unsigned char write_sequence[8]; unsigned char write_mac_secret[64]; unsigned char server_random[32]; unsigned char client_random[32]; int need_empty_fragments; int empty_fragment_done; SSL3_BUFFER rbuf; SSL3_BUFFER wbuf; SSL3_RECORD rrec; SSL3_RECORD wrec; unsigned char alert_fragment[2]; unsigned int alert_fragment_len; unsigned char handshake_fragment[4]; unsigned int handshake_fragment_len; unsigned int wnum; int wpend_tot; int wpend_type; int wpend_ret; const unsigned char *wpend_buf; EVP_MD_CTX finish_dgst1; EVP_MD_CTX finish_dgst2; int change_cipher_spec; int warn_alert; int fatal_alert; int alert_dispatch; unsigned char send_alert[2]; int renegotiate; int total_renegotiations; int num_renegotiations; int in_read_app_data; struct { unsigned char cert_verify_md[64 * 2]; unsigned char finish_md[64 * 2]; int finish_md_len; unsigned char peer_finish_md[64 * 2]; int peer_finish_md_len; unsigned long message_size; int message_type; SSL_CIPHER *new_cipher; DH *dh; int next_state; int reuse_message; int cert_req; int ctype_num; char ctype[7]; STACK *ca_names; int use_rsa_tmp; int key_block_length; unsigned char *key_block; const EVP_CIPHER *new_sym_enc; const EVP_MD *new_hash; const SSL_COMP *new_compression; int cert_request; } tmp; unsigned char previous_client_finished[64]; unsigned char previous_client_finished_len; unsigned char previous_server_finished[64]; unsigned char previous_server_finished_len; int send_connection_binding; } SSL3_STATE; #line 507 "/usr/include/openssl/ssl3.h" #line 520 "/usr/include/openssl/ssl3.h" #line 529 "/usr/include/openssl/ssl3.h" #line 554 "/usr/include/openssl/ssl3.h" #line 565 "/usr/include/openssl/ssl3.h" #line 574 "/usr/include/openssl/ssl3.h" #line 588 "/usr/include/openssl/ssl3.h" #line 600 "/usr/include/openssl/ssl3.h" #line 1148 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/tls1.h" #line 122 "/usr/include/openssl/tls1.h" #line 129 "/usr/include/openssl/tls1.h" #line 140 "/usr/include/openssl/tls1.h" const char *SSL_get_servername(const SSL *s, const int type); int SSL_get_servername_type(const SSL *s); #line 226 "/usr/include/openssl/tls1.h" #line 235 "/usr/include/openssl/tls1.h" #line 242 "/usr/include/openssl/tls1.h" #line 250 "/usr/include/openssl/tls1.h" #line 257 "/usr/include/openssl/tls1.h" #line 265 "/usr/include/openssl/tls1.h" #line 314 "/usr/include/openssl/tls1.h" #line 322 "/usr/include/openssl/tls1.h" #line 329 "/usr/include/openssl/tls1.h" #line 368 "/usr/include/openssl/tls1.h" #line 375 "/usr/include/openssl/tls1.h" #line 383 "/usr/include/openssl/tls1.h" #line 392 "/usr/include/openssl/tls1.h" #line 412 "/usr/include/openssl/tls1.h" #line 462 "/usr/include/openssl/tls1.h" struct tls_session_ticket_ext_st { unsigned short length; void *data; }; #line 1149 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/dtls1.h" #line 1 "/usr/include/openssl/pqueue.h" #line 1 "/usr/include/string.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/string.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 34 "/usr/include/string.h" extern void *memcpy (void * __dest, const void * __src, size_t __n) ; extern void *memmove (void *__dest, const void *__src, size_t __n) ; extern void *memccpy (void * __dest, const void * __src, int __c, size_t __n) ; extern void *memset (void *__s, int __c, size_t __n) ; extern int memcmp (const void *__s1, const void *__s2, size_t __n) ; extern void *memchr (const void *__s, int __c, size_t __n) ; #line 80 "/usr/include/string.h" extern char *strcpy (char * __dest, const char * __src) ; extern char *strncpy (char * __dest, const char * __src, size_t __n) ; extern char *strcat (char * __dest, const char * __src) ; extern char *strncat (char * __dest, const char * __src, size_t __n) ; extern int strcmp (const char *__s1, const char *__s2) ; extern int strncmp (const char *__s1, const char *__s2, size_t __n) ; extern int strcoll (const char *__s1, const char *__s2) ; extern size_t strxfrm (char * __dest, const char * __src, size_t __n) ; #line 127 "/usr/include/string.h" extern char *strdup (const char *__s) ; #line 164 "/usr/include/string.h" extern char *strchr (const char *__s, int __c) ; extern char *strrchr (const char *__s, int __c) ; #line 180 "/usr/include/string.h" extern size_t strcspn (const char *__s, const char *__reject) ; extern size_t strspn (const char *__s, const char *__accept) ; extern char *strpbrk (const char *__s, const char *__accept) ; extern char *strstr (const char *__haystack, const char *__needle) ; extern char *strtok (char * __s, const char * __delim) ; extern char *__strtok_r (char * __s, const char * __delim, char ** __save_ptr) ; extern char *strtok_r (char * __s, const char * __delim, char ** __save_ptr) ; #line 238 "/usr/include/string.h" extern size_t strlen (const char *__s) ; #line 252 "/usr/include/string.h" extern char *strerror (int __errnum) ; extern int __xpg_strerror_r (int __errnum, char *__buf, size_t __buflen) ; #line 285 "/usr/include/string.h" extern void __bzero (void *__s, size_t __n) ; extern void bcopy (const void *__src, void *__dest, size_t __n) ; extern void bzero (void *__s, size_t __n) ; extern int bcmp (const void *__s1, const void *__s2, size_t __n) ; extern char *index (const char *__s, int __c) ; extern char *rindex (const char *__s, int __c) ; extern int ffs (int __i) ; #line 329 "/usr/include/string.h" extern int strcasecmp (const char *__s1, const char *__s2) ; extern int strncasecmp (const char *__s1, const char *__s2, size_t __n) ; #line 350 "/usr/include/string.h" extern char *strsep (char ** __stringp, const char * __delim) ; #line 396 "/usr/include/string.h" #line 431 "/usr/include/string.h" #line 66 "/usr/include/openssl/pqueue.h" typedef struct _pqueue *pqueue; typedef struct _pitem { unsigned long priority; void *data; struct _pitem *next; } pitem; typedef struct _pitem *piterator; pitem *pitem_new(unsigned long priority, void *data); void pitem_free(pitem *item); pqueue pqueue_new(void); void pqueue_free(pqueue pq); pitem *pqueue_insert(pqueue pq, pitem *item); pitem *pqueue_peek(pqueue pq); pitem *pqueue_pop(pqueue pq); pitem *pqueue_find(pqueue pq, unsigned long priority); pitem *pqueue_iterator(pqueue pq); pitem *pqueue_next(piterator *iter); void pqueue_print(pqueue pq); int pqueue_size(pqueue pq); #line 65 "/usr/include/openssl/dtls1.h" #line 1 "/usr/include/sys/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 24 "/usr/include/sys/time.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" #line 30 "/usr/include/sys/time.h" #line 52 "/usr/include/sys/time.h" struct timezone { int tz_minuteswest; int tz_dsttime; }; typedef struct timezone * __timezone_ptr_t; extern int gettimeofday (struct timeval * __tv, __timezone_ptr_t __tz) ; extern int settimeofday (const struct timeval *__tv, const struct timezone *__tz) ; extern int adjtime (const struct timeval *__delta, struct timeval *__olddelta) ; enum __itimer_which { ITIMER_REAL = 0, ITIMER_VIRTUAL = 1, ITIMER_PROF = 2 }; struct itimerval { struct timeval it_interval; struct timeval it_value; }; typedef int __itimer_which_t; extern int getitimer (__itimer_which_t __which, struct itimerval *__value) ; extern int setitimer (__itimer_which_t __which, const struct itimerval * __new, struct itimerval * __old) ; extern int utimes (const char *__file, const struct timeval __tvp[2]) ; extern int lutimes (const char *__file, const struct timeval __tvp[2]) ; extern int futimes (int __fd, const struct timeval __tvp[2]) ; #line 159 "/usr/include/sys/time.h" #line 190 "/usr/include/sys/time.h" #line 76 "/usr/include/openssl/dtls1.h" typedef struct dtls1_bitmap_st { unsigned long map; unsigned long length; unsigned long max_seq_num; } DTLS1_BITMAP; struct dtls1_retransmit_state { EVP_CIPHER_CTX *enc_write_ctx; const EVP_MD *write_hash; COMP_CTX *compress; SSL_SESSION *session; unsigned short epoch; }; struct hm_header_st { unsigned char type; unsigned long msg_len; unsigned short seq; unsigned long frag_off; unsigned long frag_len; unsigned int is_ccs; struct dtls1_retransmit_state saved_retransmit_state; }; struct ccs_header_st { unsigned char type; unsigned short seq; }; struct dtls1_timeout_st { unsigned int read_timeouts; unsigned int write_timeouts; unsigned int num_alerts; }; typedef struct record_pqueue_st { unsigned short epoch; pqueue q; } record_pqueue; typedef struct hm_fragment_st { struct hm_header_st msg_header; unsigned char *fragment; unsigned char *reassembly; } hm_fragment; typedef struct dtls1_state_st { unsigned int send_cookie; unsigned char cookie[256]; unsigned char rcvd_cookie[256]; unsigned int cookie_len; unsigned short r_epoch; unsigned short w_epoch; DTLS1_BITMAP bitmap; DTLS1_BITMAP next_bitmap; unsigned short handshake_write_seq; unsigned short next_handshake_write_seq; unsigned short handshake_read_seq; unsigned char last_write_sequence[8]; record_pqueue unprocessed_rcds; record_pqueue processed_rcds; pqueue buffered_messages; pqueue sent_messages; record_pqueue buffered_app_data; unsigned int listen; unsigned int mtu; struct hm_header_st w_msg_hdr; struct hm_header_st r_msg_hdr; struct dtls1_timeout_st timeout; struct timeval next_timeout; unsigned short timeout_duration; unsigned char alert_fragment[2]; unsigned int alert_fragment_len; unsigned char handshake_fragment[12]; unsigned int handshake_fragment_len; unsigned int retransmitting; unsigned int change_cipher_spec_ok; } DTLS1_STATE; typedef struct dtls1_record_data_st { unsigned char *packet; unsigned int packet_length; SSL3_BUFFER rbuf; SSL3_RECORD rrec; } DTLS1_RECORD_DATA; #line 1150 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/ssl23.h" #line 1151 "/usr/include/openssl/ssl.h" #line 1163 "/usr/include/openssl/ssl.h" #line 1179 "/usr/include/openssl/ssl.h" #line 1193 "/usr/include/openssl/ssl.h" #line 1201 "/usr/include/openssl/ssl.h" size_t SSL_get_finished(const SSL *s, void *buf, size_t count); size_t SSL_get_peer_finished(const SSL *s, void *buf, size_t count); #line 1239 "/usr/include/openssl/ssl.h" #line 1252 "/usr/include/openssl/ssl.h" #line 1265 "/usr/include/openssl/ssl.h" #line 1286 "/usr/include/openssl/ssl.h" #line 1310 "/usr/include/openssl/ssl.h" #line 1325 "/usr/include/openssl/ssl.h" #line 1333 "/usr/include/openssl/ssl.h" #line 1341 "/usr/include/openssl/ssl.h" #line 1362 "/usr/include/openssl/ssl.h" #line 1369 "/usr/include/openssl/ssl.h" #line 1382 "/usr/include/openssl/ssl.h" #line 1392 "/usr/include/openssl/ssl.h" #line 1412 "/usr/include/openssl/ssl.h" #line 1421 "/usr/include/openssl/ssl.h" #line 1430 "/usr/include/openssl/ssl.h" #line 1439 "/usr/include/openssl/ssl.h" BIO_METHOD *BIO_f_ssl(void); BIO *BIO_new_ssl(SSL_CTX *ctx, int client); BIO *BIO_new_ssl_connect(SSL_CTX *ctx); BIO *BIO_new_buffer_ssl_connect(SSL_CTX *ctx); int BIO_ssl_copy_session_id(BIO *to, BIO *from); void BIO_ssl_shutdown(BIO *ssl_bio); int SSL_CTX_set_cipher_list(SSL_CTX *, const char *str); SSL_CTX *SSL_CTX_new(SSL_METHOD *meth); void SSL_CTX_free(SSL_CTX *); long SSL_CTX_set_timeout(SSL_CTX *ctx, long t); long SSL_CTX_get_timeout(const SSL_CTX *ctx); X509_STORE *SSL_CTX_get_cert_store(const SSL_CTX *); void SSL_CTX_set_cert_store(SSL_CTX *, X509_STORE *); int SSL_want(const SSL *s); int SSL_clear(SSL *s); void SSL_CTX_flush_sessions(SSL_CTX *ctx, long tm); SSL_CIPHER *SSL_get_current_cipher(const SSL *s); int SSL_CIPHER_get_bits(const SSL_CIPHER *c, int *alg_bits); char *SSL_CIPHER_get_version(const SSL_CIPHER *c); const char *SSL_CIPHER_get_name(const SSL_CIPHER *c); int SSL_get_fd(const SSL *s); int SSL_get_rfd(const SSL *s); int SSL_get_wfd(const SSL *s); const char *SSL_get_cipher_list(const SSL *s, int n); char *SSL_get_shared_ciphers(const SSL *s, char *buf, int len); int SSL_get_read_ahead(const SSL *s); int SSL_pending(const SSL *s); int SSL_set_fd(SSL *s, int fd); int SSL_set_rfd(SSL *s, int fd); int SSL_set_wfd(SSL *s, int fd); void SSL_set_bio(SSL *s, BIO *rbio, BIO *wbio); BIO *SSL_get_rbio(const SSL *s); BIO *SSL_get_wbio(const SSL *s); int SSL_set_cipher_list(SSL *s, const char *str); void SSL_set_read_ahead(SSL *s, int yes); int SSL_get_verify_mode(const SSL *s); int SSL_get_verify_depth(const SSL *s); int (*SSL_get_verify_callback(const SSL *s)) (int, X509_STORE_CTX *); void SSL_set_verify(SSL *s, int mode, int (*callback) (int ok, X509_STORE_CTX *ctx)); void SSL_set_verify_depth(SSL *s, int depth); int SSL_use_RSAPrivateKey(SSL *ssl, RSA *rsa); int SSL_use_RSAPrivateKey_ASN1(SSL *ssl, unsigned char *d, long len); int SSL_use_PrivateKey(SSL *ssl, EVP_PKEY *pkey); int SSL_use_PrivateKey_ASN1(int pk, SSL *ssl, const unsigned char *d, long len); int SSL_use_certificate(SSL *ssl, X509 *x); int SSL_use_certificate_ASN1(SSL *ssl, const unsigned char *d, int len); int SSL_use_RSAPrivateKey_file(SSL *ssl, const char *file, int type); int SSL_use_PrivateKey_file(SSL *ssl, const char *file, int type); int SSL_use_certificate_file(SSL *ssl, const char *file, int type); int SSL_CTX_use_RSAPrivateKey_file(SSL_CTX *ctx, const char *file, int type); int SSL_CTX_use_PrivateKey_file(SSL_CTX *ctx, const char *file, int type); int SSL_CTX_use_certificate_file(SSL_CTX *ctx, const char *file, int type); int SSL_CTX_use_certificate_chain_file(SSL_CTX *ctx, const char *file); STACK *SSL_load_client_CA_file(const char *file); int SSL_add_file_cert_subjects_to_stack(STACK *stackCAs, const char *file); int SSL_add_dir_cert_subjects_to_stack(STACK *stackCAs, const char *dir); void SSL_load_error_strings(void); const char *SSL_state_string(const SSL *s); const char *SSL_rstate_string(const SSL *s); const char *SSL_state_string_long(const SSL *s); const char *SSL_rstate_string_long(const SSL *s); long SSL_SESSION_get_time(const SSL_SESSION *s); long SSL_SESSION_set_time(SSL_SESSION *s, long t); long SSL_SESSION_get_timeout(const SSL_SESSION *s); long SSL_SESSION_set_timeout(SSL_SESSION *s, long t); void SSL_copy_session_id(SSL *to, const SSL *from); SSL_SESSION *SSL_SESSION_new(void); unsigned long SSL_SESSION_hash(const SSL_SESSION *a); int SSL_SESSION_cmp(const SSL_SESSION *a, const SSL_SESSION *b); const unsigned char *SSL_SESSION_get_id(const SSL_SESSION *s, unsigned int *len); int SSL_SESSION_print_fp(FILE *fp, const SSL_SESSION *ses); int SSL_SESSION_print(BIO *fp, const SSL_SESSION *ses); void SSL_SESSION_free(SSL_SESSION *ses); int i2d_SSL_SESSION(SSL_SESSION *in, unsigned char **pp); int SSL_set_session(SSL *to, SSL_SESSION *session); int SSL_CTX_add_session(SSL_CTX *s, SSL_SESSION *c); int SSL_CTX_remove_session(SSL_CTX *, SSL_SESSION *c); int SSL_CTX_set_generate_session_id(SSL_CTX *, GEN_SESSION_CB); int SSL_set_generate_session_id(SSL *, GEN_SESSION_CB); int SSL_has_matching_session_id(const SSL *ssl, const unsigned char *id, unsigned int id_len); SSL_SESSION *d2i_SSL_SESSION(SSL_SESSION **a, const unsigned char **pp, long length); X509 *SSL_get_peer_certificate(const SSL *s); STACK *SSL_get_peer_cert_chain(const SSL *s); int SSL_CTX_get_verify_mode(const SSL_CTX *ctx); int SSL_CTX_get_verify_depth(const SSL_CTX *ctx); int (*SSL_CTX_get_verify_callback(const SSL_CTX *ctx)) (int, X509_STORE_CTX *); void SSL_CTX_set_verify(SSL_CTX *ctx, int mode, int (*callback) (int, X509_STORE_CTX *)); void SSL_CTX_set_verify_depth(SSL_CTX *ctx, int depth); void SSL_CTX_set_cert_verify_callback(SSL_CTX *ctx, int (*cb) (X509_STORE_CTX *, void *), void *arg); int SSL_CTX_use_RSAPrivateKey(SSL_CTX *ctx, RSA *rsa); int SSL_CTX_use_RSAPrivateKey_ASN1(SSL_CTX *ctx, const unsigned char *d, long len); int SSL_CTX_use_PrivateKey(SSL_CTX *ctx, EVP_PKEY *pkey); int SSL_CTX_use_PrivateKey_ASN1(int pk, SSL_CTX *ctx, const unsigned char *d, long len); int SSL_CTX_use_certificate(SSL_CTX *ctx, X509 *x); int SSL_CTX_use_certificate_ASN1(SSL_CTX *ctx, int len, const unsigned char *d); void SSL_CTX_set_default_passwd_cb(SSL_CTX *ctx, pem_password_cb *cb); void SSL_CTX_set_default_passwd_cb_userdata(SSL_CTX *ctx, void *u); int SSL_CTX_check_private_key(const SSL_CTX *ctx); int SSL_check_private_key(const SSL *ctx); int SSL_CTX_set_session_id_context(SSL_CTX *ctx, const unsigned char *sid_ctx, unsigned int sid_ctx_len); SSL *SSL_new(SSL_CTX *ctx); int SSL_set_session_id_context(SSL *ssl, const unsigned char *sid_ctx, unsigned int sid_ctx_len); int SSL_CTX_set_purpose(SSL_CTX *s, int purpose); int SSL_set_purpose(SSL *s, int purpose); int SSL_CTX_set_trust(SSL_CTX *s, int trust); int SSL_set_trust(SSL *s, int trust); void SSL_free(SSL *ssl); int SSL_accept(SSL *ssl); int SSL_connect(SSL *ssl); int SSL_read(SSL *ssl, void *buf, int num); int SSL_peek(SSL *ssl, void *buf, int num); int SSL_write(SSL *ssl, const void *buf, int num); long SSL_ctrl(SSL *ssl, int cmd, long larg, void *parg); long SSL_callback_ctrl(SSL *, int, void (*)(void)); long SSL_CTX_ctrl(SSL_CTX *ctx, int cmd, long larg, void *parg); long SSL_CTX_callback_ctrl(SSL_CTX *, int, void (*)(void)); int SSL_get_error(const SSL *s, int ret_code); const char *SSL_get_version(const SSL *s); int SSL_CTX_set_ssl_version(SSL_CTX *ctx, SSL_METHOD *meth); SSL_METHOD *SSLv2_method(void); SSL_METHOD *SSLv2_server_method(void); SSL_METHOD *SSLv2_client_method(void); SSL_METHOD *SSLv3_method(void); SSL_METHOD *SSLv3_server_method(void); SSL_METHOD *SSLv3_client_method(void); SSL_METHOD *SSLv23_method(void); SSL_METHOD *SSLv23_server_method(void); SSL_METHOD *SSLv23_client_method(void); SSL_METHOD *TLSv1_method(void); SSL_METHOD *TLSv1_server_method(void); SSL_METHOD *TLSv1_client_method(void); SSL_METHOD *DTLSv1_method(void); SSL_METHOD *DTLSv1_server_method(void); SSL_METHOD *DTLSv1_client_method(void); STACK *SSL_get_ciphers(const SSL *s); int SSL_do_handshake(SSL *s); int SSL_renegotiate(SSL *s); int SSL_renegotiate_pending(SSL *s); int SSL_shutdown(SSL *s); SSL_METHOD *SSL_get_ssl_method(SSL *s); int SSL_set_ssl_method(SSL *s, SSL_METHOD *method); const char *SSL_alert_type_string_long(int value); const char *SSL_alert_type_string(int value); const char *SSL_alert_desc_string_long(int value); const char *SSL_alert_desc_string(int value); void SSL_set_client_CA_list(SSL *s, STACK *name_list); void SSL_CTX_set_client_CA_list(SSL_CTX *ctx, STACK *name_list); STACK *SSL_get_client_CA_list(const SSL *s); STACK *SSL_CTX_get_client_CA_list(const SSL_CTX *s); int SSL_add_client_CA(SSL *ssl, X509 *x); int SSL_CTX_add_client_CA(SSL_CTX *ctx, X509 *x); void SSL_set_connect_state(SSL *s); void SSL_set_accept_state(SSL *s); long SSL_get_default_timeout(const SSL *s); int SSL_library_init(void); char *SSL_CIPHER_description(const SSL_CIPHER *, char *buf, int size); STACK *SSL_dup_CA_list(STACK *sk); SSL *SSL_dup(SSL *ssl); X509 *SSL_get_certificate(const SSL *ssl); struct evp_pkey_st *SSL_get_privatekey(SSL *ssl); void SSL_CTX_set_quiet_shutdown(SSL_CTX *ctx, int mode); int SSL_CTX_get_quiet_shutdown(const SSL_CTX *ctx); void SSL_set_quiet_shutdown(SSL *ssl, int mode); int SSL_get_quiet_shutdown(const SSL *ssl); void SSL_set_shutdown(SSL *ssl, int mode); int SSL_get_shutdown(const SSL *ssl); int SSL_version(const SSL *ssl); int SSL_CTX_set_default_verify_paths(SSL_CTX *ctx); int SSL_CTX_load_verify_locations(SSL_CTX *ctx, const char *CAfile, const char *CApath); SSL_SESSION *SSL_get_session(const SSL *ssl); SSL_SESSION *SSL_get1_session(SSL *ssl); SSL_CTX *SSL_get_SSL_CTX(const SSL *ssl); SSL_CTX *SSL_set_SSL_CTX(SSL *ssl, SSL_CTX *ctx); void SSL_set_info_callback(SSL *ssl, void (*cb) (const SSL *ssl, int type, int val)); void (*SSL_get_info_callback(const SSL *ssl)) (const SSL *ssl, int type, int val); int SSL_state(const SSL *ssl); void SSL_set_verify_result(SSL *ssl, long v); long SSL_get_verify_result(const SSL *ssl); int SSL_set_ex_data(SSL *ssl, int idx, void *data); void *SSL_get_ex_data(const SSL *ssl, int idx); int SSL_get_ex_new_index(long argl, void *argp, CRYPTO_EX_new *new_func, CRYPTO_EX_dup *dup_func, CRYPTO_EX_free *free_func); int SSL_SESSION_set_ex_data(SSL_SESSION *ss, int idx, void *data); void *SSL_SESSION_get_ex_data(const SSL_SESSION *ss, int idx); int SSL_SESSION_get_ex_new_index(long argl, void *argp, CRYPTO_EX_new *new_func, CRYPTO_EX_dup *dup_func, CRYPTO_EX_free *free_func); int SSL_CTX_set_ex_data(SSL_CTX *ssl, int idx, void *data); void *SSL_CTX_get_ex_data(const SSL_CTX *ssl, int idx); int SSL_CTX_get_ex_new_index(long argl, void *argp, CRYPTO_EX_new *new_func, CRYPTO_EX_dup *dup_func, CRYPTO_EX_free *free_func); int SSL_get_ex_data_X509_STORE_CTX_idx(void); #line 1734 "/usr/include/openssl/ssl.h" #line 1749 "/usr/include/openssl/ssl.h" void SSL_CTX_set_tmp_rsa_callback(SSL_CTX *ctx, RSA *(*cb) (SSL *ssl, int is_export, int keylength)); void SSL_set_tmp_rsa_callback(SSL *ssl, RSA *(*cb) (SSL *ssl, int is_export, int keylength)); void SSL_CTX_set_tmp_dh_callback(SSL_CTX *ctx, DH *(*dh) (SSL *ssl, int is_export, int keylength)); void SSL_set_tmp_dh_callback(SSL *ssl, DH *(*dh) (SSL *ssl, int is_export, int keylength)); const COMP_METHOD *SSL_get_current_compression(SSL *s); const COMP_METHOD *SSL_get_current_expansion(SSL *s); const char *SSL_COMP_get_name(const COMP_METHOD *comp); STACK *SSL_COMP_get_compression_methods(void); int SSL_COMP_add_compression_method(int id, COMP_METHOD *cm); #line 1782 "/usr/include/openssl/ssl.h" int SSL_set_session_ticket_ext(SSL *s, void *ext_data, int ext_len); int SSL_set_session_ticket_ext_cb(SSL *s, tls_session_ticket_ext_cb_fn cb,void *arg); int SSL_set_session_secret_cb(SSL *s, tls_session_secret_cb_fn tls_session_secret_cb, void *arg); void ERR_load_SSL_strings(void); #line 1998 "/usr/include/openssl/ssl.h" #line 2257 "/usr/include/openssl/ssl.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Found header files ['openssl/ssl.h'] in [] Popping language C ================================================================================ TEST checkSharedLibrary from config.packages.ssl(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:626) TESTING: checkSharedLibrary from config.packages.ssl(config/BuildSystem/config/package.py:626) By default we don't care about checking if the library is shared Popping language C Not a clone of PETSc, don't need Lgrind Pushing language C ================================================================================ TEST configureLibrary from config.packages.valgrind(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:572) TESTING: configureLibrary from config.packages.valgrind(config/BuildSystem/config/package.py:572) Find an installation and check if it can work with PETSc ================================================================================== Checking for a functional valgrind Not checking for library in Compiler specific search VALGRIND: [] because no functions given to check for ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names No functions to check for in library [] [] Checking for headers Compiler specific search VALGRIND: [] Pushing language C ================================================================================ TEST checkInclude from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['valgrind/valgrind.h'] in [] Checking include with compiler flags var CPPFLAGS [] Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c".: Popping language C Not checking for library in Package specific search directory VALGRIND: [] because no functions given to check for ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names No functions to check for in library [] [] Checking for headers Package specific search directory VALGRIND: ['/usr/local/include'] Pushing language C ================================================================================ TEST checkInclude from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['valgrind/valgrind.h'] in ['/usr/local/include'] Checking include with compiler flags var CPPFLAGS ['/usr/local/include'] Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/usr/local/include /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c".: Popping language C Not checking for library in Package specific search directory VALGRIND: [] because no functions given to check for ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names No functions to check for in library [] [] Checking for headers Package specific search directory VALGRIND: ['/usr/local/include'] Pushing language C ================================================================================ TEST checkInclude from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['valgrind/valgrind.h'] in ['/usr/local/include'] Checking include with compiler flags var CPPFLAGS ['/usr/local/include'] Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/usr/local/include /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c".: Popping language C Not checking for library in Package specific search directory VALGRIND: [] because no functions given to check for ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names No functions to check for in library [] [] Checking for headers Package specific search directory VALGRIND: ['/opt/local/include'] Pushing language C ================================================================================ TEST checkInclude from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['valgrind/valgrind.h'] in ['/opt/local/include'] Checking include with compiler flags var CPPFLAGS ['/opt/local/include'] Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/opt/local/include /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c".: Popping language C VALGRIND: DirPath not found.. skipping: /opt/local/lib64 Executing: uname -s stdout: Linux =============================================================================== It appears you do not have valgrind installed on your system. We HIGHLY recommend you install it from www.valgrind.org Or install valgrind-devel or equivalent using your package manager. Then rerun ./configure =============================================================================== Popping language C ================================================================================ TEST alternateConfigureLibrary from config.packages.pami(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.pami(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.PARTY(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.PARTY(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default Not a clone of PETSc or no Fortran, don't need Sowing ================================================================================ TEST alternateConfigureLibrary from config.packages.p4est(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.p4est(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.tchem(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.tchem(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.cgns(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.cgns(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.fftw(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.fftw(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.Chaco(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.Chaco(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.Mathematica(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.Mathematica(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST locateC2html from config.packages.c2html(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/c2html.py:33) TESTING: locateC2html from config.packages.c2html(config/BuildSystem/config/packages/c2html.py:33) Looking for default C2html executable Checking for program /opt/FJSVtclang/check/c2html...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/c2html...not found Checking for program /opt/kusu/bin/c2html...not found Checking for program /opt/kusu/sbin/c2html...not found Checking for program /usr/pgsql-9.0/bin/c2html...not found Checking for program /usr/local/bin/c2html...not found Checking for program /bin/c2html...not found Checking for program /usr/bin/c2html...not found Checking for program /home/hp150306/t00196/bin/c2html...not found Checking for program /home/hp150306/t00196/shortcut/c2html...not found Checking for program /opt/FJSVxosmmm/sbin/c2html...not found Checking for program /home/hp150306/t00196/c2html...not found Checking for program /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/bin/win32fe/c2html...not found ================================================================================ TEST alternateConfigureLibrary from config.packages.Numpy(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.Numpy(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.mpi4py(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/mpi4py.py:70) TESTING: alternateConfigureLibrary from config.packages.mpi4py(config/BuildSystem/config/packages/mpi4py.py:70) Defined make rule "mpi4py-build" with dependencies "" and code [] Defined make rule "mpi4py-install" with dependencies "" and code [] ================================================================================ TEST alternateConfigureLibrary from config.packages.petsc4py(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/petsc4py.py:103) TESTING: alternateConfigureLibrary from config.packages.petsc4py(config/BuildSystem/config/packages/petsc4py.py:103) Defined make rule "petsc4py-build" with dependencies "" and code [] Defined make rule "petsc4py-install" with dependencies "" and code [] ================================================================================ TEST alternateConfigureLibrary from config.packages.Matlab(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/Matlab.py:35) TESTING: alternateConfigureLibrary from config.packages.Matlab(config/BuildSystem/config/packages/Matlab.py:35) ================================================================================ TEST alternateConfigureLibrary from config.packages.MatlabEngine(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.MatlabEngine(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.opengl(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.opengl(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.glut(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.glut(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.opengles(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.opengles(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.boost(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.boost(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.PTScotch(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.PTScotch(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default Pushing language C ================================================================================ TEST configureLibrary from config.packages.hwloc(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:572) TESTING: configureLibrary from config.packages.hwloc(config/BuildSystem/config/package.py:572) Find an installation and check if it can work with PETSc ================================================================================== Checking for a functional hwloc Checking for library in Compiler specific search HWLOC: [] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [hwloc_topology_init] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char hwloc_topology_init(); static void _check_hwloc_topology_init() { hwloc_topology_init(); } int main() { _check_hwloc_topology_init();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o: In function `_check_hwloc_topology_init': conftest.c:(.text+0x4): undefined reference to `hwloc_topology_init' Popping language C Checking for library in Compiler specific search HWLOC: ['libhwloc.a'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [hwloc_topology_init] in library ['libhwloc.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char hwloc_topology_init(); static void _check_hwloc_topology_init() { hwloc_topology_init(); } int main() { _check_hwloc_topology_init();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -lhwloc -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lhwloc Popping language C Checking for library in Compiler specific search HWLOC: ['libhwloc.a', 'libxml2.a'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [hwloc_topology_init] in library ['libhwloc.a', 'libxml2.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char hwloc_topology_init(); static void _check_hwloc_topology_init() { hwloc_topology_init(); } int main() { _check_hwloc_topology_init();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -lhwloc -lxml2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lhwloc Popping language C Checking for library in Package specific search directory HWLOC: ['/usr/local/lib/libhwloc.a'] Contents: ['bin', 'etc', 'games', 'include', 'lib', 'lib64', 'libexec', 'sbin', 'share', 'src'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [hwloc_topology_init] in library ['/usr/local/lib/libhwloc.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char hwloc_topology_init(); static void _check_hwloc_topology_init() { hwloc_topology_init(); } int main() { _check_hwloc_topology_init();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib -L/usr/local/lib -lhwloc -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lhwloc Popping language C Checking for library in Package specific search directory HWLOC: ['/usr/local/lib/libhwloc.a', 'libxml2.a'] Contents: ['bin', 'etc', 'games', 'include', 'lib', 'lib64', 'libexec', 'sbin', 'share', 'src'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [hwloc_topology_init] in library ['/usr/local/lib/libhwloc.a', 'libxml2.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char hwloc_topology_init(); static void _check_hwloc_topology_init() { hwloc_topology_init(); } int main() { _check_hwloc_topology_init();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib -L/usr/local/lib -lhwloc -lxml2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lhwloc Popping language C Checking for library in Package specific search directory HWLOC: ['/usr/local/lib64/libhwloc.a'] Contents: ['bin', 'etc', 'games', 'include', 'lib', 'lib64', 'libexec', 'sbin', 'share', 'src'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [hwloc_topology_init] in library ['/usr/local/lib64/libhwloc.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char hwloc_topology_init(); static void _check_hwloc_topology_init() { hwloc_topology_init(); } int main() { _check_hwloc_topology_init();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib64 -L/usr/local/lib64 -lhwloc -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lhwloc Popping language C Checking for library in Package specific search directory HWLOC: ['/usr/local/lib64/libhwloc.a', 'libxml2.a'] Contents: ['bin', 'etc', 'games', 'include', 'lib', 'lib64', 'libexec', 'sbin', 'share', 'src'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [hwloc_topology_init] in library ['/usr/local/lib64/libhwloc.a', 'libxml2.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char hwloc_topology_init(); static void _check_hwloc_topology_init() { hwloc_topology_init(); } int main() { _check_hwloc_topology_init();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib64 -L/usr/local/lib64 -lhwloc -lxml2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lhwloc Popping language C Checking for library in Package specific search directory HWLOC: ['/opt/local/lib/libhwloc.a'] Contents: ['bin', 'conf', 'gcc', 'gcc-4.8.1', 'include', 'lib', 'Python-2.7.3', 'Python-2.7.3.omp', 'share', 'sparc64-unknown-linux-gnu', 'openjdk7u45', 'mpiJava', 'mpigcc', 'GCC_4.6.3'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [hwloc_topology_init] in library ['/opt/local/lib/libhwloc.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char hwloc_topology_init(); static void _check_hwloc_topology_init() { hwloc_topology_init(); } int main() { _check_hwloc_topology_init();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -Wl,-rpath,/opt/local/lib -L/opt/local/lib -lhwloc -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lhwloc Popping language C Checking for library in Package specific search directory HWLOC: ['/opt/local/lib/libhwloc.a', 'libxml2.a'] Contents: ['bin', 'conf', 'gcc', 'gcc-4.8.1', 'include', 'lib', 'Python-2.7.3', 'Python-2.7.3.omp', 'share', 'sparc64-unknown-linux-gnu', 'openjdk7u45', 'mpiJava', 'mpigcc', 'GCC_4.6.3'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [hwloc_topology_init] in library ['/opt/local/lib/libhwloc.a', 'libxml2.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char hwloc_topology_init(); static void _check_hwloc_topology_init() { hwloc_topology_init(); } int main() { _check_hwloc_topology_init();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -Wl,-rpath,/opt/local/lib -L/opt/local/lib -lhwloc -lxml2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lhwloc Popping language C HWLOC: DirPath not found.. skipping: /opt/local/lib64 ================================================================================ TEST checkSharedLibrary from config.packages.hwloc(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:626) TESTING: checkSharedLibrary from config.packages.hwloc(config/BuildSystem/config/package.py:626) By default we don't care about checking if the library is shared Popping language C ================================================================================ TEST alternateConfigureLibrary from config.packages.hdf5(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.hdf5(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.netcdf(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.netcdf(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.MOAB(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.MOAB(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.netcdf-cxx(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.netcdf-cxx(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.exodusii(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.exodusii(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default Pushing language C ================================================================================ TEST configureLibrary from config.packages.X(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:572) TESTING: configureLibrary from config.packages.X(config/BuildSystem/config/package.py:572) Find an installation and check if it can work with PETSc ================================================================================== Checking for a functional X Checking for library in Compiler specific search X: [] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [XSetWMName] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char XSetWMName(); static void _check_XSetWMName() { XSetWMName(); } int main() { _check_XSetWMName();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o: In function `_check_XSetWMName': conftest.c:(.text+0x4): undefined reference to `XSetWMName' Popping language C Checking for library in Compiler specific search X: ['libX11.a'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [XSetWMName] in library ['libX11.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char XSetWMName(); static void _check_XSetWMName() { XSetWMName(); } int main() { _check_XSetWMName();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -lX11 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lX11 Popping language C X: SearchDir DirPath not found.. skipping: /opt/X11 X: SearchDir DirPath not found.. skipping: /Developer/SDKs/MacOSX10.5.sdk/usr/X11 X: SearchDir DirPath not found.. skipping: /Developer/SDKs/MacOSX10.4u.sdk/usr/X11R6 X: SearchDir DirPath not found.. skipping: /usr/X11 X: SearchDir DirPath not found.. skipping: /usr/X11R6 X: SearchDir DirPath not found.. skipping: /usr/X11R5 X: SearchDir DirPath not found.. skipping: /usr/X11R4 X: SearchDir DirPath not found.. skipping: /usr/local/X11 X: SearchDir DirPath not found.. skipping: /usr/local/X11R6 X: SearchDir DirPath not found.. skipping: /usr/local/X11R5 X: SearchDir DirPath not found.. skipping: /usr/local/X11R4 X: SearchDir DirPath not found.. skipping: /usr/X386 X: SearchDir DirPath not found.. skipping: /usr/x386 X: SearchDir DirPath not found.. skipping: /usr/XFree86/X11 Checking for library in Package specific search directory X: ['/usr/local/lib/libX11.a'] Contents: ['bin', 'etc', 'games', 'include', 'lib', 'lib64', 'libexec', 'sbin', 'share', 'src'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [XSetWMName] in library ['/usr/local/lib/libX11.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char XSetWMName(); static void _check_XSetWMName() { XSetWMName(); } int main() { _check_XSetWMName();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib -L/usr/local/lib -lX11 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lX11 Popping language C Checking for library in Package specific search directory X: ['/usr/local/lib64/libX11.a'] Contents: ['bin', 'etc', 'games', 'include', 'lib', 'lib64', 'libexec', 'sbin', 'share', 'src'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [XSetWMName] in library ['/usr/local/lib64/libX11.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char XSetWMName(); static void _check_XSetWMName() { XSetWMName(); } int main() { _check_XSetWMName();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib64 -L/usr/local/lib64 -lX11 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lX11 Popping language C X: SearchDir DirPath not found.. skipping: /usr/local/x11r5 X: SearchDir DirPath not found.. skipping: /usr/lpp/Xamples X: SearchDir DirPath not found.. skipping: /usr/openwin X: SearchDir DirPath not found.. skipping: /usr/openwin/share ================================================================================ TEST checkSharedLibrary from config.packages.X(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:626) TESTING: checkSharedLibrary from config.packages.X(config/BuildSystem/config/package.py:626) By default we don't care about checking if the library is shared Popping language C ================================================================================ TEST alternateConfigureLibrary from config.packages.Triangle(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.Triangle(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.afterimage(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.afterimage(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default Pushing language C ================================================================================ TEST configureLibrary from config.packages.openmp(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/openmp.py:15) TESTING: configureLibrary from config.packages.openmp(config/BuildSystem/config/packages/openmp.py:15) Checks for -fopenmp compiler flag Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added C compiler flag -Kopenmp Popping language C Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -X9 -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.F Successful compile: Source: program main end Added FC compiler flag -Kopenmp Popping language FC Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added Cxx compiler flag -Kopenmp Popping language Cxx ================================================================================ TEST checkSharedLibrary from config.packages.openmp(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:626) TESTING: checkSharedLibrary from config.packages.openmp(config/BuildSystem/config/package.py:626) By default we don't care about checking if the library is shared Popping language C ================================================================================ TEST alternateConfigureLibrary from config.packages.saws(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.saws(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default Pushing language C ================================================================================ TEST configureLibrary from config.packages.pthread(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/pthread.py:19) TESTING: configureLibrary from config.packages.pthread(config/BuildSystem/config/packages/pthread.py:19) Checks for pthread_barrier_t, cpu_set_t, and sys/sysctl.h ================================================================================== Checking for a functional pthread Checking for library in Compiler specific search PTHREAD: [] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [pthread_create] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char pthread_create(); static void _check_pthread_create() { pthread_create(); } int main() { _check_pthread_create();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Checking for headers Compiler specific search PTHREAD: [] Pushing language C ================================================================================ TEST checkInclude from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['pthread.h'] in [] Checking include with compiler flags var CPPFLAGS [] Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/usr/include/pthread.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 24 "/usr/include/pthread.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 25 "/usr/include/pthread.h" #line 1 "/usr/include/sched.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 24 "/usr/include/sched.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 27 "/usr/include/sched.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 30 "/usr/include/sched.h" #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 33 "/usr/include/sched.h" #line 1 "/usr/include/bits/sched.h" #line 36 "/usr/include/bits/sched.h" #line 64 "/usr/include/bits/sched.h" struct sched_param { int __sched_priority; }; extern int clone (int (*__fn) (void *__arg), void *__child_stack, int __flags, void *__arg, ...) ; extern int unshare (int __flags) ; extern int sched_getcpu (void) ; struct __sched_param { int __sched_priority; }; typedef unsigned long int __cpu_mask; typedef struct { __cpu_mask __bits[1024 / (8 * sizeof (__cpu_mask))]; } cpu_set_t; #line 146 "/usr/include/bits/sched.h" #line 164 "/usr/include/bits/sched.h" #line 174 "/usr/include/bits/sched.h" extern int __sched_cpucount (size_t __setsize, const cpu_set_t *__setp) ; extern cpu_set_t *__sched_cpualloc (size_t __count) ; extern void __sched_cpufree (cpu_set_t *__set) ; #line 36 "/usr/include/sched.h" extern int sched_setparam (__pid_t __pid, const struct sched_param *__param) ; extern int sched_getparam (__pid_t __pid, struct sched_param *__param) ; extern int sched_setscheduler (__pid_t __pid, int __policy, const struct sched_param *__param) ; extern int sched_getscheduler (__pid_t __pid) ; extern int sched_yield (void) ; extern int sched_get_priority_max (int __algorithm) ; extern int sched_get_priority_min (int __algorithm) ; extern int sched_rr_get_interval (__pid_t __pid, struct timespec *__t) ; #line 117 "/usr/include/sched.h" #line 26 "/usr/include/pthread.h" #line 1 "/usr/include/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 30 "/usr/include/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 40 "/usr/include/time.h" #line 1 "/usr/include/bits/time.h" #line 43 "/usr/include/bits/time.h" #line 44 "/usr/include/time.h" typedef __clock_t clock_t; typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" struct tm { int tm_sec; int tm_min; int tm_hour; int tm_mday; int tm_mon; int tm_year; int tm_wday; int tm_yday; int tm_isdst; long int tm_gmtoff; const char *tm_zone; }; struct itimerspec { struct timespec it_interval; struct timespec it_value; }; struct sigevent; typedef __pid_t pid_t; extern clock_t clock (void) ; extern time_t time (time_t *__timer) ; extern double difftime (time_t __time1, time_t __time0) ; extern time_t mktime (struct tm *__tp) ; extern size_t strftime (char * __s, size_t __maxsize, const char * __format, const struct tm * __tp) ; #line 212 "/usr/include/time.h" #line 227 "/usr/include/time.h" extern struct tm *gmtime (const time_t *__timer) ; extern struct tm *localtime (const time_t *__timer) ; extern struct tm *gmtime_r (const time_t * __timer, struct tm * __tp) ; extern struct tm *localtime_r (const time_t * __timer, struct tm * __tp) ; extern char *asctime (const struct tm *__tp) ; extern char *ctime (const time_t *__timer) ; extern char *asctime_r (const struct tm * __tp, char * __buf) ; extern char *ctime_r (const time_t * __timer, char * __buf) ; extern char *__tzname[2]; extern int __daylight; extern long int __timezone; extern char *tzname[2]; extern void tzset (void) ; extern int daylight; extern long int timezone; extern int stime (const time_t *__when) ; extern time_t timegm (struct tm *__tp) ; extern time_t timelocal (struct tm *__tp) ; extern int dysize (int __year) ; extern int nanosleep (const struct timespec *__requested_time, struct timespec *__remaining); extern int clock_getres (clockid_t __clock_id, struct timespec *__res) ; extern int clock_gettime (clockid_t __clock_id, struct timespec *__tp) ; extern int clock_settime (clockid_t __clock_id, const struct timespec *__tp) ; extern int clock_nanosleep (clockid_t __clock_id, int __flags, const struct timespec *__req, struct timespec *__rem); extern int clock_getcpuclockid (pid_t __pid, clockid_t *__clock_id) ; extern int timer_create (clockid_t __clock_id, struct sigevent * __evp, timer_t * __timerid) ; extern int timer_delete (timer_t __timerid) ; extern int timer_settime (timer_t __timerid, int __flags, const struct itimerspec * __value, struct itimerspec * __ovalue) ; extern int timer_gettime (timer_t __timerid, struct itimerspec *__value) ; extern int timer_getoverrun (timer_t __timerid) ; #line 400 "/usr/include/time.h" #line 415 "/usr/include/time.h" #line 27 "/usr/include/pthread.h" #line 1 "/usr/include/signal.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 30 "/usr/include/signal.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 34 "/usr/include/signal.h" #line 46 "/usr/include/signal.h" typedef __sigset_t sigset_t; #line 401 "/usr/include/signal.h" #line 30 "/usr/include/pthread.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 31 "/usr/include/pthread.h" #line 1 "/usr/include/bits/setjmp.h" #line 1 "/usr/include/bits/wordsize.h" #line 28 "/usr/include/bits/setjmp.h" typedef struct __sparc64_jmp_buf { struct __sparc64_jmp_buf *uc_link; unsigned long uc_flags; unsigned long uc_sigmask; struct __sparc64_jmp_buf_mcontext { unsigned long mc_gregs[53]; unsigned long mc_fp; unsigned long mc_i7; struct __sparc64_jmp_buf_fpu { union { unsigned int sregs[512]; unsigned long dregs[256]; long double qregs[128]; } mcfpu_fpregs; unsigned long mcfpu_fsr; unsigned long mcfpu_fprs; unsigned long mcfpu_gsr; unsigned long mcfpu_xasr; void *mcfpu_fq; unsigned char mcfpu_qcnt; unsigned char mcfpu_qentsz; unsigned char mcfpu_enab; } mc_fpregs; } uc_mcontext; } __jmp_buf[1]; #line 70 "/usr/include/bits/setjmp.h" #line 32 "/usr/include/pthread.h" #line 1 "/usr/include/bits/wordsize.h" #line 33 "/usr/include/pthread.h" enum { PTHREAD_CREATE_JOINABLE, PTHREAD_CREATE_DETACHED }; enum { PTHREAD_MUTEX_TIMED_NP, PTHREAD_MUTEX_RECURSIVE_NP, PTHREAD_MUTEX_ERRORCHECK_NP, PTHREAD_MUTEX_ADAPTIVE_NP #line 63 "/usr/include/pthread.h" }; #line 74 "/usr/include/pthread.h" #line 85 "/usr/include/pthread.h" #line 111 "/usr/include/pthread.h" enum { PTHREAD_RWLOCK_PREFER_READER_NP, PTHREAD_RWLOCK_PREFER_WRITER_NP, PTHREAD_RWLOCK_PREFER_WRITER_NONRECURSIVE_NP, PTHREAD_RWLOCK_DEFAULT_NP = PTHREAD_RWLOCK_PREFER_READER_NP }; #line 144 "/usr/include/pthread.h" enum { PTHREAD_INHERIT_SCHED, PTHREAD_EXPLICIT_SCHED }; enum { PTHREAD_SCOPE_SYSTEM, PTHREAD_SCOPE_PROCESS }; enum { PTHREAD_PROCESS_PRIVATE, PTHREAD_PROCESS_SHARED }; struct _pthread_cleanup_buffer { void (*__routine) (void *); void *__arg; int __canceltype; struct _pthread_cleanup_buffer *__prev; }; enum { PTHREAD_CANCEL_ENABLE, PTHREAD_CANCEL_DISABLE }; enum { PTHREAD_CANCEL_DEFERRED, PTHREAD_CANCEL_ASYNCHRONOUS }; extern int pthread_create (pthread_t * __newthread, const pthread_attr_t * __attr, void *(*__start_routine) (void *), void * __arg) ; extern void pthread_exit (void *__retval) ; extern int pthread_join (pthread_t __th, void **__thread_return); #line 258 "/usr/include/pthread.h" extern int pthread_detach (pthread_t __th) ; extern pthread_t pthread_self (void) ; extern int pthread_equal (pthread_t __thread1, pthread_t __thread2) ; extern int pthread_attr_init (pthread_attr_t *__attr) ; extern int pthread_attr_destroy (pthread_attr_t *__attr) ; extern int pthread_attr_getdetachstate (const pthread_attr_t *__attr, int *__detachstate) ; extern int pthread_attr_setdetachstate (pthread_attr_t *__attr, int __detachstate) ; extern int pthread_attr_getguardsize (const pthread_attr_t *__attr, size_t *__guardsize) ; extern int pthread_attr_setguardsize (pthread_attr_t *__attr, size_t __guardsize) ; extern int pthread_attr_getschedparam (const pthread_attr_t * __attr, struct sched_param * __param) ; extern int pthread_attr_setschedparam (pthread_attr_t * __attr, const struct sched_param * __param) ; extern int pthread_attr_getschedpolicy (const pthread_attr_t * __attr, int * __policy) ; extern int pthread_attr_setschedpolicy (pthread_attr_t *__attr, int __policy) ; extern int pthread_attr_getinheritsched (const pthread_attr_t * __attr, int * __inherit) ; extern int pthread_attr_setinheritsched (pthread_attr_t *__attr, int __inherit) ; extern int pthread_attr_getscope (const pthread_attr_t * __attr, int * __scope) ; extern int pthread_attr_setscope (pthread_attr_t *__attr, int __scope) ; extern int pthread_attr_getstackaddr (const pthread_attr_t * __attr, void ** __stackaddr) ; extern int pthread_attr_setstackaddr (pthread_attr_t *__attr, void *__stackaddr) ; extern int pthread_attr_getstacksize (const pthread_attr_t * __attr, size_t * __stacksize) ; extern int pthread_attr_setstacksize (pthread_attr_t *__attr, size_t __stacksize) ; extern int pthread_attr_getstack (const pthread_attr_t * __attr, void ** __stackaddr, size_t * __stacksize) ; extern int pthread_attr_setstack (pthread_attr_t *__attr, void *__stackaddr, size_t __stacksize) ; #line 407 "/usr/include/pthread.h" extern int pthread_setschedparam (pthread_t __target_thread, int __policy, const struct sched_param *__param) ; extern int pthread_getschedparam (pthread_t __target_thread, int * __policy, struct sched_param * __param) ; extern int pthread_setschedprio (pthread_t __target_thread, int __prio) ; #line 435 "/usr/include/pthread.h" #line 455 "/usr/include/pthread.h" extern int pthread_once (pthread_once_t *__once_control, void (*__init_routine) (void)) ; extern int pthread_setcancelstate (int __state, int *__oldstate); extern int pthread_setcanceltype (int __type, int *__oldtype); extern int pthread_cancel (pthread_t __th); extern void pthread_testcancel (void); typedef struct { struct { __jmp_buf __cancel_jmp_buf; int __mask_was_saved; } __cancel_jmp_buf[1]; void *__pad[4]; } __pthread_unwind_buf_t ; struct __pthread_cleanup_frame { void (*__cancel_routine) (void *); void *__cancel_arg; int __do_it; int __cancel_type; }; #line 629 "/usr/include/pthread.h" #line 652 "/usr/include/pthread.h" extern void __pthread_register_cancel (__pthread_unwind_buf_t *__buf) ; #line 663 "/usr/include/pthread.h" extern void __pthread_unregister_cancel (__pthread_unwind_buf_t *__buf) ; #line 701 "/usr/include/pthread.h" extern void __pthread_unwind_next (__pthread_unwind_buf_t *__buf) ; struct __jmp_buf_tag; extern int __sigsetjmp (struct __jmp_buf_tag *__env, int __savemask) ; extern int pthread_mutex_init (pthread_mutex_t *__mutex, const pthread_mutexattr_t *__mutexattr) ; extern int pthread_mutex_destroy (pthread_mutex_t *__mutex) ; extern int pthread_mutex_trylock (pthread_mutex_t *__mutex) ; extern int pthread_mutex_lock (pthread_mutex_t *__mutex) ; extern int pthread_mutex_timedlock (pthread_mutex_t * __mutex, const struct timespec * __abstime) ; extern int pthread_mutex_unlock (pthread_mutex_t *__mutex) ; #line 761 "/usr/include/pthread.h" extern int pthread_mutexattr_init (pthread_mutexattr_t *__attr) ; extern int pthread_mutexattr_destroy (pthread_mutexattr_t *__attr) ; extern int pthread_mutexattr_getpshared (const pthread_mutexattr_t * __attr, int * __pshared) ; extern int pthread_mutexattr_setpshared (pthread_mutexattr_t *__attr, int __pshared) ; #line 827 "/usr/include/pthread.h" #line 839 "/usr/include/pthread.h" extern int pthread_rwlock_init (pthread_rwlock_t * __rwlock, const pthread_rwlockattr_t * __attr) ; extern int pthread_rwlock_destroy (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlock_rdlock (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlock_tryrdlock (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlock_timedrdlock (pthread_rwlock_t * __rwlock, const struct timespec * __abstime) ; extern int pthread_rwlock_wrlock (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlock_trywrlock (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlock_timedwrlock (pthread_rwlock_t * __rwlock, const struct timespec * __abstime) ; extern int pthread_rwlock_unlock (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlockattr_init (pthread_rwlockattr_t *__attr) ; extern int pthread_rwlockattr_destroy (pthread_rwlockattr_t *__attr) ; extern int pthread_rwlockattr_getpshared (const pthread_rwlockattr_t * __attr, int * __pshared) ; extern int pthread_rwlockattr_setpshared (pthread_rwlockattr_t *__attr, int __pshared) ; extern int pthread_rwlockattr_getkind_np (const pthread_rwlockattr_t * __attr, int * __pref) ; extern int pthread_rwlockattr_setkind_np (pthread_rwlockattr_t *__attr, int __pref) ; extern int pthread_cond_init (pthread_cond_t * __cond, const pthread_condattr_t * __cond_attr) ; extern int pthread_cond_destroy (pthread_cond_t *__cond) ; extern int pthread_cond_signal (pthread_cond_t *__cond) ; extern int pthread_cond_broadcast (pthread_cond_t *__cond) ; extern int pthread_cond_wait (pthread_cond_t * __cond, pthread_mutex_t * __mutex) ; extern int pthread_cond_timedwait (pthread_cond_t * __cond, pthread_mutex_t * __mutex, const struct timespec * __abstime) ; extern int pthread_condattr_init (pthread_condattr_t *__attr) ; extern int pthread_condattr_destroy (pthread_condattr_t *__attr) ; extern int pthread_condattr_getpshared (const pthread_condattr_t * __attr, int * __pshared) ; extern int pthread_condattr_setpshared (pthread_condattr_t *__attr, int __pshared) ; extern int pthread_condattr_getclock (const pthread_condattr_t * __attr, __clockid_t * __clock_id) ; extern int pthread_condattr_setclock (pthread_condattr_t *__attr, __clockid_t __clock_id) ; extern int pthread_spin_init (pthread_spinlock_t *__lock, int __pshared) ; extern int pthread_spin_destroy (pthread_spinlock_t *__lock) ; extern int pthread_spin_lock (pthread_spinlock_t *__lock) ; extern int pthread_spin_trylock (pthread_spinlock_t *__lock) ; extern int pthread_spin_unlock (pthread_spinlock_t *__lock) ; extern int pthread_barrier_init (pthread_barrier_t * __barrier, const pthread_barrierattr_t * __attr, unsigned int __count) ; extern int pthread_barrier_destroy (pthread_barrier_t *__barrier) ; extern int pthread_barrier_wait (pthread_barrier_t *__barrier) ; extern int pthread_barrierattr_init (pthread_barrierattr_t *__attr) ; extern int pthread_barrierattr_destroy (pthread_barrierattr_t *__attr) ; extern int pthread_barrierattr_getpshared (const pthread_barrierattr_t * __attr, int * __pshared) ; extern int pthread_barrierattr_setpshared (pthread_barrierattr_t *__attr, int __pshared) ; extern int pthread_key_create (pthread_key_t *__key, void (*__destr_function) (void *)) ; extern int pthread_key_delete (pthread_key_t __key) ; extern void *pthread_getspecific (pthread_key_t __key) ; extern int pthread_setspecific (pthread_key_t __key, const void *__pointer) ; extern int pthread_getcpuclockid (pthread_t __thread_id, __clockid_t *__clock_id) ; extern int pthread_atfork (void (*__prepare) (void), void (*__parent) (void), void (*__child) (void)) ; #line 1116 "/usr/include/pthread.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Found header files ['pthread.h'] in [] Popping language C All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread/conftest.c", line 6: warning: variable "a" was declared but never referenced pthread_barrier_t *a; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { pthread_barrier_t *a; ; return 0; } Defined "HAVE_PTHREAD_BARRIER_T" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread/conftest.c", line 6: warning: variable "a" was declared but never referenced cpu_set_t *a; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { cpu_set_t *a; ; return 0; } Defined "HAVE_SCHED_CPU_SET_T" to "1" Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread/conftest.c" #line 1 "/usr/include/sys/sysctl.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/sys/sysctl.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 25 "/usr/include/sys/sysctl.h" #line 43 "/usr/include/sys/sysctl.h" #line 1 "/usr/include/linux/sysctl.h" #line 1 "/usr/include/linux/kernel.h" #line 29 "/usr/include/linux/sysctl.h" #line 1 "/usr/include/linux/types.h" #line 30 "/usr/include/linux/sysctl.h" struct file; struct completion; struct __sysctl_args { int *name; int nlen; void *oldval; size_t *oldlenp; void *newval; size_t newlen; unsigned long __unused[4]; }; enum { CTL_KERN=1, CTL_VM=2, CTL_NET=3, CTL_PROC=4, CTL_FS=5, CTL_DEBUG=6, CTL_DEV=7, CTL_BUS=8, CTL_ABI=9, CTL_CPU=10, CTL_ARLAN=254, CTL_S390DBF=5677, CTL_SUNRPC=7249, CTL_PM=9899, CTL_FRV=9898, }; enum { CTL_BUS_ISA=1 }; enum { INOTIFY_MAX_USER_INSTANCES=1, INOTIFY_MAX_USER_WATCHES=2, INOTIFY_MAX_QUEUED_EVENTS=3 }; enum { KERN_OSTYPE=1, KERN_OSRELEASE=2, KERN_OSREV=3, KERN_VERSION=4, KERN_SECUREMASK=5, KERN_PROF=6, KERN_NODENAME=7, KERN_DOMAINNAME=8, KERN_PANIC=15, KERN_REALROOTDEV=16, KERN_SPARC_REBOOT=21, KERN_CTLALTDEL=22, KERN_PRINTK=23, KERN_NAMETRANS=24, KERN_PPC_HTABRECLAIM=25, KERN_PPC_ZEROPAGED=26, KERN_PPC_POWERSAVE_NAP=27, KERN_MODPROBE=28, KERN_SG_BIG_BUFF=29, KERN_ACCT=30, KERN_PPC_L2CR=31, KERN_RTSIGNR=32, KERN_RTSIGMAX=33, KERN_SHMMAX=34, KERN_MSGMAX=35, KERN_MSGMNB=36, KERN_MSGPOOL=37, KERN_SYSRQ=38, KERN_MAX_THREADS=39, KERN_RANDOM=40, KERN_SHMALL=41, KERN_MSGMNI=42, KERN_SEM=43, KERN_SPARC_STOP_A=44, KERN_SHMMNI=45, KERN_OVERFLOWUID=46, KERN_OVERFLOWGID=47, KERN_SHMPATH=48, KERN_HOTPLUG=49, KERN_IEEE_EMULATION_WARNINGS=50, KERN_S390_USER_DEBUG_LOGGING=51, KERN_CORE_USES_PID=52, KERN_TAINTED=53, KERN_CADPID=54, KERN_PIDMAX=55, KERN_CORE_PATTERN=56, KERN_PANIC_ON_OOPS=57, KERN_HPPA_PWRSW=58, KERN_HPPA_UNALIGNED=59, KERN_PRINTK_RATELIMIT=60, KERN_PRINTK_RATELIMIT_BURST=61, KERN_PTY=62, KERN_NGROUPS_MAX=63, KERN_SPARC_SCONS_PWROFF=64, KERN_HZ_TIMER=65, KERN_UNKNOWN_NMI_PANIC=66, KERN_BOOTLOADER_TYPE=67, KERN_RANDOMIZE=68, KERN_SETUID_DUMPABLE=69, KERN_SPIN_RETRY=70, KERN_ACPI_VIDEO_FLAGS=71, KERN_IA64_UNALIGNED=72, KERN_COMPAT_LOG=73, KERN_MAX_LOCK_DEPTH=74, KERN_NMI_WATCHDOG=75, KERN_PANIC_ON_NMI=76, }; enum { VM_UNUSED1=1, VM_UNUSED2=2, VM_UNUSED3=3, VM_UNUSED4=4, VM_OVERCOMMIT_MEMORY=5, VM_UNUSED5=6, VM_UNUSED7=7, VM_UNUSED8=8, VM_UNUSED9=9, VM_PAGE_CLUSTER=10, VM_DIRTY_BACKGROUND=11, VM_DIRTY_RATIO=12, VM_DIRTY_WB_CS=13, VM_DIRTY_EXPIRE_CS=14, VM_NR_PDFLUSH_THREADS=15, VM_OVERCOMMIT_RATIO=16, VM_PAGEBUF=17, VM_HUGETLB_PAGES=18, VM_SWAPPINESS=19, VM_LOWMEM_RESERVE_RATIO=20, VM_MIN_FREE_KBYTES=21, VM_MAX_MAP_COUNT=22, VM_LAPTOP_MODE=23, VM_BLOCK_DUMP=24, VM_HUGETLB_GROUP=25, VM_VFS_CACHE_PRESSURE=26, VM_LEGACY_VA_LAYOUT=27, VM_SWAP_TOKEN_TIMEOUT=28, VM_DROP_PAGECACHE=29, VM_PERCPU_PAGELIST_FRACTION=30, VM_ZONE_RECLAIM_MODE=31, VM_MIN_UNMAPPED=32, VM_PANIC_ON_OOM=33, VM_VDSO_ENABLED=34, VM_MIN_SLAB=35, VM_MPG_CTL=36, }; enum mpg_proc_type { MPG_CTL_TOTAL_BYTES = 1, }; enum { NET_CORE=1, NET_ETHER=2, NET_802=3, NET_UNIX=4, NET_IPV4=5, NET_IPX=6, NET_ATALK=7, NET_NETROM=8, NET_AX25=9, NET_BRIDGE=10, NET_ROSE=11, NET_IPV6=12, NET_X25=13, NET_TR=14, NET_DECNET=15, NET_ECONET=16, NET_SCTP=17, NET_LLC=18, NET_NETFILTER=19, NET_DCCP=20, NET_IRDA=412, }; enum { RANDOM_POOLSIZE=1, RANDOM_ENTROPY_COUNT=2, RANDOM_READ_THRESH=3, RANDOM_WRITE_THRESH=4, RANDOM_BOOT_ID=5, RANDOM_UUID=6 }; enum { PTY_MAX=1, PTY_NR=2 }; enum { BUS_ISA_MEM_BASE=1, BUS_ISA_PORT_BASE=2, BUS_ISA_PORT_SHIFT=3 }; enum { NET_CORE_WMEM_MAX=1, NET_CORE_RMEM_MAX=2, NET_CORE_WMEM_DEFAULT=3, NET_CORE_RMEM_DEFAULT=4, NET_CORE_MAX_BACKLOG=6, NET_CORE_FASTROUTE=7, NET_CORE_MSG_COST=8, NET_CORE_MSG_BURST=9, NET_CORE_OPTMEM_MAX=10, NET_CORE_HOT_LIST_LENGTH=11, NET_CORE_DIVERT_VERSION=12, NET_CORE_NO_CONG_THRESH=13, NET_CORE_NO_CONG=14, NET_CORE_LO_CONG=15, NET_CORE_MOD_CONG=16, NET_CORE_DEV_WEIGHT=17, NET_CORE_SOMAXCONN=18, NET_CORE_BUDGET=19, NET_CORE_AEVENT_ETIME=20, NET_CORE_AEVENT_RSEQTH=21, NET_CORE_WARNINGS=22, }; enum { NET_UNIX_DESTROY_DELAY=1, NET_UNIX_DELETE_DELAY=2, NET_UNIX_MAX_DGRAM_QLEN=3, }; enum { NET_NF_CONNTRACK_MAX=1, NET_NF_CONNTRACK_TCP_TIMEOUT_SYN_SENT=2, NET_NF_CONNTRACK_TCP_TIMEOUT_SYN_RECV=3, NET_NF_CONNTRACK_TCP_TIMEOUT_ESTABLISHED=4, NET_NF_CONNTRACK_TCP_TIMEOUT_FIN_WAIT=5, NET_NF_CONNTRACK_TCP_TIMEOUT_CLOSE_WAIT=6, NET_NF_CONNTRACK_TCP_TIMEOUT_LAST_ACK=7, NET_NF_CONNTRACK_TCP_TIMEOUT_TIME_WAIT=8, NET_NF_CONNTRACK_TCP_TIMEOUT_CLOSE=9, NET_NF_CONNTRACK_UDP_TIMEOUT=10, NET_NF_CONNTRACK_UDP_TIMEOUT_STREAM=11, NET_NF_CONNTRACK_ICMP_TIMEOUT=12, NET_NF_CONNTRACK_GENERIC_TIMEOUT=13, NET_NF_CONNTRACK_BUCKETS=14, NET_NF_CONNTRACK_LOG_INVALID=15, NET_NF_CONNTRACK_TCP_TIMEOUT_MAX_RETRANS=16, NET_NF_CONNTRACK_TCP_LOOSE=17, NET_NF_CONNTRACK_TCP_BE_LIBERAL=18, NET_NF_CONNTRACK_TCP_MAX_RETRANS=19, NET_NF_CONNTRACK_SCTP_TIMEOUT_CLOSED=20, NET_NF_CONNTRACK_SCTP_TIMEOUT_COOKIE_WAIT=21, NET_NF_CONNTRACK_SCTP_TIMEOUT_COOKIE_ECHOED=22, NET_NF_CONNTRACK_SCTP_TIMEOUT_ESTABLISHED=23, NET_NF_CONNTRACK_SCTP_TIMEOUT_SHUTDOWN_SENT=24, NET_NF_CONNTRACK_SCTP_TIMEOUT_SHUTDOWN_RECD=25, NET_NF_CONNTRACK_SCTP_TIMEOUT_SHUTDOWN_ACK_SENT=26, NET_NF_CONNTRACK_COUNT=27, NET_NF_CONNTRACK_ICMPV6_TIMEOUT=28, NET_NF_CONNTRACK_FRAG6_TIMEOUT=29, NET_NF_CONNTRACK_FRAG6_LOW_THRESH=30, NET_NF_CONNTRACK_FRAG6_HIGH_THRESH=31, NET_NF_CONNTRACK_CHECKSUM=32, }; enum { NET_IPV4_FORWARD=8, NET_IPV4_DYNADDR=9, NET_IPV4_CONF=16, NET_IPV4_NEIGH=17, NET_IPV4_ROUTE=18, NET_IPV4_FIB_HASH=19, NET_IPV4_NETFILTER=20, NET_IPV4_TCP_TIMESTAMPS=33, NET_IPV4_TCP_WINDOW_SCALING=34, NET_IPV4_TCP_SACK=35, NET_IPV4_TCP_RETRANS_COLLAPSE=36, NET_IPV4_DEFAULT_TTL=37, NET_IPV4_AUTOCONFIG=38, NET_IPV4_NO_PMTU_DISC=39, NET_IPV4_TCP_SYN_RETRIES=40, NET_IPV4_IPFRAG_HIGH_THRESH=41, NET_IPV4_IPFRAG_LOW_THRESH=42, NET_IPV4_IPFRAG_TIME=43, NET_IPV4_TCP_MAX_KA_PROBES=44, NET_IPV4_TCP_KEEPALIVE_TIME=45, NET_IPV4_TCP_KEEPALIVE_PROBES=46, NET_IPV4_TCP_RETRIES1=47, NET_IPV4_TCP_RETRIES2=48, NET_IPV4_TCP_FIN_TIMEOUT=49, NET_IPV4_IP_MASQ_DEBUG=50, NET_TCP_SYNCOOKIES=51, NET_TCP_STDURG=52, NET_TCP_RFC1337=53, NET_TCP_SYN_TAILDROP=54, NET_TCP_MAX_SYN_BACKLOG=55, NET_IPV4_LOCAL_PORT_RANGE=56, NET_IPV4_ICMP_ECHO_IGNORE_ALL=57, NET_IPV4_ICMP_ECHO_IGNORE_BROADCASTS=58, NET_IPV4_ICMP_SOURCEQUENCH_RATE=59, NET_IPV4_ICMP_DESTUNREACH_RATE=60, NET_IPV4_ICMP_TIMEEXCEED_RATE=61, NET_IPV4_ICMP_PARAMPROB_RATE=62, NET_IPV4_ICMP_ECHOREPLY_RATE=63, NET_IPV4_ICMP_IGNORE_BOGUS_ERROR_RESPONSES=64, NET_IPV4_IGMP_MAX_MEMBERSHIPS=65, NET_TCP_TW_RECYCLE=66, NET_IPV4_ALWAYS_DEFRAG=67, NET_IPV4_TCP_KEEPALIVE_INTVL=68, NET_IPV4_INET_PEER_THRESHOLD=69, NET_IPV4_INET_PEER_MINTTL=70, NET_IPV4_INET_PEER_MAXTTL=71, NET_IPV4_INET_PEER_GC_MINTIME=72, NET_IPV4_INET_PEER_GC_MAXTIME=73, NET_TCP_ORPHAN_RETRIES=74, NET_TCP_ABORT_ON_OVERFLOW=75, NET_TCP_SYNACK_RETRIES=76, NET_TCP_MAX_ORPHANS=77, NET_TCP_MAX_TW_BUCKETS=78, NET_TCP_FACK=79, NET_TCP_REORDERING=80, NET_TCP_ECN=81, NET_TCP_DSACK=82, NET_TCP_MEM=83, NET_TCP_WMEM=84, NET_TCP_RMEM=85, NET_TCP_APP_WIN=86, NET_TCP_ADV_WIN_SCALE=87, NET_IPV4_NONLOCAL_BIND=88, NET_IPV4_ICMP_RATELIMIT=89, NET_IPV4_ICMP_RATEMASK=90, NET_TCP_TW_REUSE=91, NET_TCP_FRTO=92, NET_TCP_LOW_LATENCY=93, NET_IPV4_IPFRAG_SECRET_INTERVAL=94, NET_IPV4_IGMP_MAX_MSF=96, NET_TCP_NO_METRICS_SAVE=97, NET_TCP_DEFAULT_WIN_SCALE=105, NET_TCP_MODERATE_RCVBUF=106, NET_TCP_TSO_WIN_DIVISOR=107, NET_TCP_BIC_BETA=108, NET_IPV4_ICMP_ERRORS_USE_INBOUND_IFADDR=109, NET_TCP_CONG_CONTROL=110, NET_TCP_ABC=111, NET_IPV4_IPFRAG_MAX_DIST=112, NET_TCP_MTU_PROBING=113, NET_TCP_BASE_MSS=114, NET_IPV4_TCP_WORKAROUND_SIGNED_WINDOWS=115, NET_TCP_DMA_COPYBREAK=116, NET_TCP_SLOW_START_AFTER_IDLE=117, NET_CIPSOV4_CACHE_ENABLE=118, NET_CIPSOV4_CACHE_BUCKET_SIZE=119, NET_CIPSOV4_RBM_OPTFMT=120, NET_CIPSOV4_RBM_STRICTVALID=121, NET_TCP_AVAIL_CONG_CONTROL=122, NET_TCP_ALLOWED_CONG_CONTROL=123, NET_TCP_MAX_SSTHRESH=124, NET_TCP_FRTO_RESPONSE=125, }; enum { NET_IPV4_ROUTE_FLUSH=1, NET_IPV4_ROUTE_MIN_DELAY=2, NET_IPV4_ROUTE_MAX_DELAY=3, NET_IPV4_ROUTE_GC_THRESH=4, NET_IPV4_ROUTE_MAX_SIZE=5, NET_IPV4_ROUTE_GC_MIN_INTERVAL=6, NET_IPV4_ROUTE_GC_TIMEOUT=7, NET_IPV4_ROUTE_GC_INTERVAL=8, NET_IPV4_ROUTE_REDIRECT_LOAD=9, NET_IPV4_ROUTE_REDIRECT_NUMBER=10, NET_IPV4_ROUTE_REDIRECT_SILENCE=11, NET_IPV4_ROUTE_ERROR_COST=12, NET_IPV4_ROUTE_ERROR_BURST=13, NET_IPV4_ROUTE_GC_ELASTICITY=14, NET_IPV4_ROUTE_MTU_EXPIRES=15, NET_IPV4_ROUTE_MIN_PMTU=16, NET_IPV4_ROUTE_MIN_ADVMSS=17, NET_IPV4_ROUTE_SECRET_INTERVAL=18, NET_IPV4_ROUTE_GC_MIN_INTERVAL_MS=19, }; enum { NET_PROTO_CONF_ALL=-2, NET_PROTO_CONF_DEFAULT=-3 }; enum { NET_IPV4_CONF_FORWARDING=1, NET_IPV4_CONF_MC_FORWARDING=2, NET_IPV4_CONF_PROXY_ARP=3, NET_IPV4_CONF_ACCEPT_REDIRECTS=4, NET_IPV4_CONF_SECURE_REDIRECTS=5, NET_IPV4_CONF_SEND_REDIRECTS=6, NET_IPV4_CONF_SHARED_MEDIA=7, NET_IPV4_CONF_RP_FILTER=8, NET_IPV4_CONF_ACCEPT_SOURCE_ROUTE=9, NET_IPV4_CONF_BOOTP_RELAY=10, NET_IPV4_CONF_LOG_MARTIANS=11, NET_IPV4_CONF_TAG=12, NET_IPV4_CONF_ARPFILTER=13, NET_IPV4_CONF_MEDIUM_ID=14, NET_IPV4_CONF_NOXFRM=15, NET_IPV4_CONF_NOPOLICY=16, NET_IPV4_CONF_FORCE_IGMP_VERSION=17, NET_IPV4_CONF_ARP_ANNOUNCE=18, NET_IPV4_CONF_ARP_IGNORE=19, NET_IPV4_CONF_PROMOTE_SECONDARIES=20, NET_IPV4_CONF_ARP_ACCEPT=21, __NET_IPV4_CONF_MAX }; enum { NET_IPV4_NF_CONNTRACK_MAX=1, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_SYN_SENT=2, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_SYN_RECV=3, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_ESTABLISHED=4, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_FIN_WAIT=5, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_CLOSE_WAIT=6, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_LAST_ACK=7, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_TIME_WAIT=8, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_CLOSE=9, NET_IPV4_NF_CONNTRACK_UDP_TIMEOUT=10, NET_IPV4_NF_CONNTRACK_UDP_TIMEOUT_STREAM=11, NET_IPV4_NF_CONNTRACK_ICMP_TIMEOUT=12, NET_IPV4_NF_CONNTRACK_GENERIC_TIMEOUT=13, NET_IPV4_NF_CONNTRACK_BUCKETS=14, NET_IPV4_NF_CONNTRACK_LOG_INVALID=15, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_MAX_RETRANS=16, NET_IPV4_NF_CONNTRACK_TCP_LOOSE=17, NET_IPV4_NF_CONNTRACK_TCP_BE_LIBERAL=18, NET_IPV4_NF_CONNTRACK_TCP_MAX_RETRANS=19, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_CLOSED=20, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_COOKIE_WAIT=21, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_COOKIE_ECHOED=22, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_ESTABLISHED=23, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_SHUTDOWN_SENT=24, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_SHUTDOWN_RECD=25, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_SHUTDOWN_ACK_SENT=26, NET_IPV4_NF_CONNTRACK_COUNT=27, NET_IPV4_NF_CONNTRACK_CHECKSUM=28, }; enum { NET_IPV6_CONF=16, NET_IPV6_NEIGH=17, NET_IPV6_ROUTE=18, NET_IPV6_ICMP=19, NET_IPV6_BINDV6ONLY=20, NET_IPV6_IP6FRAG_HIGH_THRESH=21, NET_IPV6_IP6FRAG_LOW_THRESH=22, NET_IPV6_IP6FRAG_TIME=23, NET_IPV6_IP6FRAG_SECRET_INTERVAL=24, NET_IPV6_MLD_MAX_MSF=25, }; enum { NET_IPV6_ROUTE_FLUSH=1, NET_IPV6_ROUTE_GC_THRESH=2, NET_IPV6_ROUTE_MAX_SIZE=3, NET_IPV6_ROUTE_GC_MIN_INTERVAL=4, NET_IPV6_ROUTE_GC_TIMEOUT=5, NET_IPV6_ROUTE_GC_INTERVAL=6, NET_IPV6_ROUTE_GC_ELASTICITY=7, NET_IPV6_ROUTE_MTU_EXPIRES=8, NET_IPV6_ROUTE_MIN_ADVMSS=9, NET_IPV6_ROUTE_GC_MIN_INTERVAL_MS=10 }; enum { NET_IPV6_FORWARDING=1, NET_IPV6_HOP_LIMIT=2, NET_IPV6_MTU=3, NET_IPV6_ACCEPT_RA=4, NET_IPV6_ACCEPT_REDIRECTS=5, NET_IPV6_AUTOCONF=6, NET_IPV6_DAD_TRANSMITS=7, NET_IPV6_RTR_SOLICITS=8, NET_IPV6_RTR_SOLICIT_INTERVAL=9, NET_IPV6_RTR_SOLICIT_DELAY=10, NET_IPV6_USE_TEMPADDR=11, NET_IPV6_TEMP_VALID_LFT=12, NET_IPV6_TEMP_PREFERED_LFT=13, NET_IPV6_REGEN_MAX_RETRY=14, NET_IPV6_MAX_DESYNC_FACTOR=15, NET_IPV6_MAX_ADDRESSES=16, NET_IPV6_FORCE_MLD_VERSION=17, NET_IPV6_ACCEPT_RA_DEFRTR=18, NET_IPV6_ACCEPT_RA_PINFO=19, NET_IPV6_ACCEPT_RA_RTR_PREF=20, NET_IPV6_RTR_PROBE_INTERVAL=21, NET_IPV6_ACCEPT_RA_RT_INFO_MAX_PLEN=22, NET_IPV6_PROXY_NDP=23, NET_IPV6_ACCEPT_SOURCE_ROUTE=25, __NET_IPV6_MAX }; enum { NET_IPV6_ICMP_RATELIMIT=1 }; enum { NET_NEIGH_MCAST_SOLICIT=1, NET_NEIGH_UCAST_SOLICIT=2, NET_NEIGH_APP_SOLICIT=3, NET_NEIGH_RETRANS_TIME=4, NET_NEIGH_REACHABLE_TIME=5, NET_NEIGH_DELAY_PROBE_TIME=6, NET_NEIGH_GC_STALE_TIME=7, NET_NEIGH_UNRES_QLEN=8, NET_NEIGH_PROXY_QLEN=9, NET_NEIGH_ANYCAST_DELAY=10, NET_NEIGH_PROXY_DELAY=11, NET_NEIGH_LOCKTIME=12, NET_NEIGH_GC_INTERVAL=13, NET_NEIGH_GC_THRESH1=14, NET_NEIGH_GC_THRESH2=15, NET_NEIGH_GC_THRESH3=16, NET_NEIGH_RETRANS_TIME_MS=17, NET_NEIGH_REACHABLE_TIME_MS=18, __NET_NEIGH_MAX }; enum { NET_DCCP_DEFAULT=1, }; enum { NET_IPX_PPROP_BROADCASTING=1, NET_IPX_FORWARDING=2 }; enum { NET_LLC2=1, NET_LLC_STATION=2, }; enum { NET_LLC2_TIMEOUT=1, }; enum { NET_LLC_STATION_ACK_TIMEOUT=1, }; enum { NET_LLC2_ACK_TIMEOUT=1, NET_LLC2_P_TIMEOUT=2, NET_LLC2_REJ_TIMEOUT=3, NET_LLC2_BUSY_TIMEOUT=4, }; enum { NET_ATALK_AARP_EXPIRY_TIME=1, NET_ATALK_AARP_TICK_TIME=2, NET_ATALK_AARP_RETRANSMIT_LIMIT=3, NET_ATALK_AARP_RESOLVE_TIME=4 }; enum { NET_NETROM_DEFAULT_PATH_QUALITY=1, NET_NETROM_OBSOLESCENCE_COUNT_INITIALISER=2, NET_NETROM_NETWORK_TTL_INITIALISER=3, NET_NETROM_TRANSPORT_TIMEOUT=4, NET_NETROM_TRANSPORT_MAXIMUM_TRIES=5, NET_NETROM_TRANSPORT_ACKNOWLEDGE_DELAY=6, NET_NETROM_TRANSPORT_BUSY_DELAY=7, NET_NETROM_TRANSPORT_REQUESTED_WINDOW_SIZE=8, NET_NETROM_TRANSPORT_NO_ACTIVITY_TIMEOUT=9, NET_NETROM_ROUTING_CONTROL=10, NET_NETROM_LINK_FAILS_COUNT=11, NET_NETROM_RESET=12 }; enum { NET_AX25_IP_DEFAULT_MODE=1, NET_AX25_DEFAULT_MODE=2, NET_AX25_BACKOFF_TYPE=3, NET_AX25_CONNECT_MODE=4, NET_AX25_STANDARD_WINDOW=5, NET_AX25_EXTENDED_WINDOW=6, NET_AX25_T1_TIMEOUT=7, NET_AX25_T2_TIMEOUT=8, NET_AX25_T3_TIMEOUT=9, NET_AX25_IDLE_TIMEOUT=10, NET_AX25_N2=11, NET_AX25_PACLEN=12, NET_AX25_PROTOCOL=13, NET_AX25_DAMA_SLAVE_TIMEOUT=14 }; enum { NET_ROSE_RESTART_REQUEST_TIMEOUT=1, NET_ROSE_CALL_REQUEST_TIMEOUT=2, NET_ROSE_RESET_REQUEST_TIMEOUT=3, NET_ROSE_CLEAR_REQUEST_TIMEOUT=4, NET_ROSE_ACK_HOLD_BACK_TIMEOUT=5, NET_ROSE_ROUTING_CONTROL=6, NET_ROSE_LINK_FAIL_TIMEOUT=7, NET_ROSE_MAX_VCS=8, NET_ROSE_WINDOW_SIZE=9, NET_ROSE_NO_ACTIVITY_TIMEOUT=10 }; enum { NET_X25_RESTART_REQUEST_TIMEOUT=1, NET_X25_CALL_REQUEST_TIMEOUT=2, NET_X25_RESET_REQUEST_TIMEOUT=3, NET_X25_CLEAR_REQUEST_TIMEOUT=4, NET_X25_ACK_HOLD_BACK_TIMEOUT=5, NET_X25_FORWARD=6 }; enum { NET_TR_RIF_TIMEOUT=1 }; enum { NET_DECNET_NODE_TYPE = 1, NET_DECNET_NODE_ADDRESS = 2, NET_DECNET_NODE_NAME = 3, NET_DECNET_DEFAULT_DEVICE = 4, NET_DECNET_TIME_WAIT = 5, NET_DECNET_DN_COUNT = 6, NET_DECNET_DI_COUNT = 7, NET_DECNET_DR_COUNT = 8, NET_DECNET_DST_GC_INTERVAL = 9, NET_DECNET_CONF = 10, NET_DECNET_NO_FC_MAX_CWND = 11, NET_DECNET_MEM = 12, NET_DECNET_RMEM = 13, NET_DECNET_WMEM = 14, NET_DECNET_DEBUG_LEVEL = 255 }; enum { NET_DECNET_CONF_LOOPBACK = -2, NET_DECNET_CONF_DDCMP = -3, NET_DECNET_CONF_PPP = -4, NET_DECNET_CONF_X25 = -5, NET_DECNET_CONF_GRE = -6, NET_DECNET_CONF_ETHER = -7 }; enum { NET_DECNET_CONF_DEV_PRIORITY = 1, NET_DECNET_CONF_DEV_T1 = 2, NET_DECNET_CONF_DEV_T2 = 3, NET_DECNET_CONF_DEV_T3 = 4, NET_DECNET_CONF_DEV_FORWARDING = 5, NET_DECNET_CONF_DEV_BLKSIZE = 6, NET_DECNET_CONF_DEV_STATE = 7 }; enum { NET_SCTP_RTO_INITIAL = 1, NET_SCTP_RTO_MIN = 2, NET_SCTP_RTO_MAX = 3, NET_SCTP_RTO_ALPHA = 4, NET_SCTP_RTO_BETA = 5, NET_SCTP_VALID_COOKIE_LIFE = 6, NET_SCTP_ASSOCIATION_MAX_RETRANS = 7, NET_SCTP_PATH_MAX_RETRANS = 8, NET_SCTP_MAX_INIT_RETRANSMITS = 9, NET_SCTP_HB_INTERVAL = 10, NET_SCTP_PRESERVE_ENABLE = 11, NET_SCTP_MAX_BURST = 12, NET_SCTP_ADDIP_ENABLE = 13, NET_SCTP_PRSCTP_ENABLE = 14, NET_SCTP_SNDBUF_POLICY = 15, NET_SCTP_SACK_TIMEOUT = 16, NET_SCTP_RCVBUF_POLICY = 17, }; enum { NET_BRIDGE_NF_CALL_ARPTABLES = 1, NET_BRIDGE_NF_CALL_IPTABLES = 2, NET_BRIDGE_NF_CALL_IP6TABLES = 3, NET_BRIDGE_NF_FILTER_VLAN_TAGGED = 4, NET_BRIDGE_NF_FILTER_PPPOE_TAGGED = 5, }; enum { NET_IRDA_DISCOVERY=1, NET_IRDA_DEVNAME=2, NET_IRDA_DEBUG=3, NET_IRDA_FAST_POLL=4, NET_IRDA_DISCOVERY_SLOTS=5, NET_IRDA_DISCOVERY_TIMEOUT=6, NET_IRDA_SLOT_TIMEOUT=7, NET_IRDA_MAX_BAUD_RATE=8, NET_IRDA_MIN_TX_TURN_TIME=9, NET_IRDA_MAX_TX_DATA_SIZE=10, NET_IRDA_MAX_TX_WINDOW=11, NET_IRDA_MAX_NOREPLY_TIME=12, NET_IRDA_WARN_NOREPLY_TIME=13, NET_IRDA_LAP_KEEPALIVE_TIME=14, }; enum { FS_NRINODE=1, FS_STATINODE=2, FS_MAXINODE=3, FS_NRDQUOT=4, FS_MAXDQUOT=5, FS_NRFILE=6, FS_MAXFILE=7, FS_DENTRY=8, FS_NRSUPER=9, FS_MAXSUPER=10, FS_OVERFLOWUID=11, FS_OVERFLOWGID=12, FS_LEASES=13, FS_DIR_NOTIFY=14, FS_LEASE_TIME=15, FS_DQSTATS=16, FS_XFS=17, FS_AIO_NR=18, FS_AIO_MAX_NR=19, FS_INOTIFY=20, FS_OCFS2=988, }; enum { FS_DQ_LOOKUPS = 1, FS_DQ_DROPS = 2, FS_DQ_READS = 3, FS_DQ_WRITES = 4, FS_DQ_CACHE_HITS = 5, FS_DQ_ALLOCATED = 6, FS_DQ_FREE = 7, FS_DQ_SYNCS = 8, FS_DQ_WARNINGS = 9, }; enum { DEV_CDROM=1, DEV_HWMON=2, DEV_PARPORT=3, DEV_RAID=4, DEV_MAC_HID=5, DEV_SCSI=6, DEV_IPMI=7, }; enum { DEV_CDROM_INFO=1, DEV_CDROM_AUTOCLOSE=2, DEV_CDROM_AUTOEJECT=3, DEV_CDROM_DEBUG=4, DEV_CDROM_LOCK=5, DEV_CDROM_CHECK_MEDIA=6 }; enum { DEV_PARPORT_DEFAULT=-3 }; enum { DEV_RAID_SPEED_LIMIT_MIN=1, DEV_RAID_SPEED_LIMIT_MAX=2 }; enum { DEV_PARPORT_DEFAULT_TIMESLICE=1, DEV_PARPORT_DEFAULT_SPINTIME=2 }; enum { DEV_PARPORT_SPINTIME=1, DEV_PARPORT_BASE_ADDR=2, DEV_PARPORT_IRQ=3, DEV_PARPORT_DMA=4, DEV_PARPORT_MODES=5, DEV_PARPORT_DEVICES=6, DEV_PARPORT_AUTOPROBE=16 }; enum { DEV_PARPORT_DEVICES_ACTIVE=-3, }; enum { DEV_PARPORT_DEVICE_TIMESLICE=1, }; enum { DEV_MAC_HID_KEYBOARD_SENDS_LINUX_KEYCODES=1, DEV_MAC_HID_KEYBOARD_LOCK_KEYCODES=2, DEV_MAC_HID_MOUSE_BUTTON_EMULATION=3, DEV_MAC_HID_MOUSE_BUTTON2_KEYCODE=4, DEV_MAC_HID_MOUSE_BUTTON3_KEYCODE=5, DEV_MAC_HID_ADB_MOUSE_SENDS_KEYCODES=6 }; enum { DEV_SCSI_LOGGING_LEVEL=1, }; enum { DEV_IPMI_POWEROFF_POWERCYCLE=1, }; enum { ABI_DEFHANDLER_COFF=1, ABI_DEFHANDLER_ELF=2, ABI_DEFHANDLER_LCALL7=3, ABI_DEFHANDLER_LIBCSO=4, ABI_TRACE=5, ABI_FAKE_UTSNAME=6, }; #line 45 "/usr/include/sys/sysctl.h" #line 63 "/usr/include/sys/sysctl.h" extern int sysctl (int *__name, int __nlen, void *__oldval, size_t *__oldlenp, void *__newval, size_t __newlen) ; #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_SYSCTL_H" to "1" ================================================================================ TEST checkSharedLibrary from config.packages.pthread(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:626) TESTING: checkSharedLibrary from config.packages.pthread(config/BuildSystem/config/package.py:626) By default we don't care about checking if the library is shared Popping language C ================================================================================ TEST alternateConfigureLibrary from config.packages.mpe(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.mpe(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.papi(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.papi(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.scientificpython(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.scientificpython(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.fiat(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.fiat(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST configureScalarType from PETSc.options.scalarTypes(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/scalarTypes.py:37) TESTING: configureScalarType from PETSc.options.scalarTypes(config/PETSc/options/scalarTypes.py:37) Choose between real and complex numbers Defined "USE_SCALAR_REAL" to "1" Scalar type is real Pushing language C All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0; int a = isnormal(b); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest.o: In function `main': conftest.c:(.text+0x2c): undefined reference to `isnormal' Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0; int a = isnan(b); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_ISNAN" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0; int a = isinf(b); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_ISINF" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0;int a = _isnan(b); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest.o: In function `main': conftest.c:(.text+0x2c): undefined reference to `_isnan' Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0;int a = _finite(b); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes/conftest.o: In function `main': conftest.c:(.text+0x2c): undefined reference to `_finite' Popping language C ================================================================================ TEST configurePrecision from PETSc.options.scalarTypes(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/scalarTypes.py:77) TESTING: configurePrecision from PETSc.options.scalarTypes(config/PETSc/options/scalarTypes.py:77) Set the default real number precision for PETSc objects Defined "USE_REAL_DOUBLE" to "1" Defined make macro "PETSC_SCALAR_SIZE" to "64" Precision is double ================================================================================ TEST alternateConfigureLibrary from config.packages.opencl(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.opencl(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.viennacl(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.viennacl(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.cuda(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.cuda(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.cusp(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.cusp(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST locateCMake from config.packages.cmake(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/cmake.py:32) TESTING: locateCMake from config.packages.cmake(config/BuildSystem/config/packages/cmake.py:32) Looking for default CMake executable Checking for program /opt/FJSVtclang/check/cmake...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/cmake...not found Checking for program /opt/kusu/bin/cmake...not found Checking for program /opt/kusu/sbin/cmake...not found Checking for program /usr/pgsql-9.0/bin/cmake...not found Checking for program /usr/local/bin/cmake...not found Checking for program /bin/cmake...not found Checking for program /usr/bin/cmake...not found Checking for program /home/hp150306/t00196/bin/cmake...not found Checking for program /home/hp150306/t00196/shortcut/cmake...not found Checking for program /opt/FJSVxosmmm/sbin/cmake...not found Checking for program /home/hp150306/t00196/cmake...not found Checking for program /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/bin/win32fe/cmake...not found ================================================================================ TEST alternateConfigureLibrary from config.packages.metis(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.metis(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.parmetis(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.parmetis(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.Zoltan(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.Zoltan(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.fblaslapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.fblaslapack(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.f2cblaslapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.f2cblaslapack(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST configureLibrary from config.packages.BlasLapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/BlasLapack.py:333) TESTING: configureLibrary from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:333) ================================================================================ Checking for a functional BLAS and LAPACK in User specified BLAS/LAPACK library ================================================================================ TEST checkLib from config.packages.BlasLapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/BlasLapack.py:100) TESTING: checkLib from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:100) Checking for BLAS and LAPACK symbols Checking for functions [ddot_] in library ['-SSL2'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot_(); static void _check_ddot_() { ddot_(); } int main() { _check_ddot_();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Checking for functions [dgetrs_] in library ['-SSL2'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgetrs_(); static void _check_dgetrs_() { dgetrs_(); } int main() { _check_dgetrs_();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Checking for functions [dgeev_] in library ['-SSL2'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgeev_(); static void _check_dgeev_() { dgeev_(); } int main() { _check_dgeev_();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Found Fortran mangling on BLAS/LAPACK which is underscore Defined "BLASLAPACK_UNDERSCORE" to "1" ================================================================================ TEST check64BitBLASIndices from config.packages.BlasLapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/BlasLapack.py:466) TESTING: check64BitBLASIndices from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:466) Check for and use 64bit integer blas ================================================================================ TEST checkESSL from config.packages.BlasLapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/BlasLapack.py:396) TESTING: checkESSL from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:396) Check for the IBM ESSL library Checking for functions [iessl] in library ['-SSL2'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char iessl(); static void _check_iessl() { iessl(); } int main() { _check_iessl();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o: In function `_check_iessl': conftest.c:(.text+0x4): undefined reference to `iessl' Popping language C ================================================================================ TEST checkPESSL from config.packages.BlasLapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/BlasLapack.py:408) TESTING: checkPESSL from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:408) Check for the IBM PESSL library - and error out - if used instead of ESSL Checking for functions [ipessl] in library ['-SSL2'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ipessl(); static void _check_ipessl() { ipessl(); } int main() { _check_ipessl();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o: In function `_check_ipessl': conftest.c:(.text+0x4): undefined reference to `ipessl' Popping language C ================================================================================ TEST checkMKL from config.packages.BlasLapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/BlasLapack.py:402) TESTING: checkMKL from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:402) Check for Intel MKL library Checking for functions [mkl_set_num_threads] in library ['-SSL2'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char mkl_set_num_threads(); static void _check_mkl_set_num_threads() { mkl_set_num_threads(); } int main() { _check_mkl_set_num_threads();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o: In function `_check_mkl_set_num_threads': conftest.c:(.text+0x4): undefined reference to `mkl_set_num_threads' Popping language C ================================================================================ TEST checkMissing from config.packages.BlasLapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/BlasLapack.py:431) TESTING: checkMissing from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:431) Check for missing LAPACK routines Checking for functions [dtrsen_ dgerfs_ dgges_ dtgsen_ dgesvd_ dgetrf_ dgetrs_ dgeev_ dgelss_ dsyev_ dsyevx_ dsygv_ dsygvx_ dpotrf_ dpotrs_ dstebz_ dpttrf_ dpttrs_ dstein_ dorgqr_ dgeqrf_ dgesv_ dhseqr_ dsteqr_] in library ['-SSL2'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dtrsen_(); static void _check_dtrsen_() { dtrsen_(); } char dgerfs_(); static void _check_dgerfs_() { dgerfs_(); } char dgges_(); static void _check_dgges_() { dgges_(); } char dtgsen_(); static void _check_dtgsen_() { dtgsen_(); } char dgesvd_(); static void _check_dgesvd_() { dgesvd_(); } char dgetrf_(); static void _check_dgetrf_() { dgetrf_(); } char dgetrs_(); static void _check_dgetrs_() { dgetrs_(); } char dgeev_(); static void _check_dgeev_() { dgeev_(); } char dgelss_(); static void _check_dgelss_() { dgelss_(); } char dsyev_(); static void _check_dsyev_() { dsyev_(); } char dsyevx_(); static void _check_dsyevx_() { dsyevx_(); } char dsygv_(); static void _check_dsygv_() { dsygv_(); } char dsygvx_(); static void _check_dsygvx_() { dsygvx_(); } char dpotrf_(); static void _check_dpotrf_() { dpotrf_(); } char dpotrs_(); static void _check_dpotrs_() { dpotrs_(); } char dstebz_(); static void _check_dstebz_() { dstebz_(); } char dpttrf_(); static void _check_dpttrf_() { dpttrf_(); } char dpttrs_(); static void _check_dpttrs_() { dpttrs_(); } char dstein_(); static void _check_dstein_() { dstein_(); } char dorgqr_(); static void _check_dorgqr_() { dorgqr_(); } char dgeqrf_(); static void _check_dgeqrf_() { dgeqrf_(); } char dgesv_(); static void _check_dgesv_() { dgesv_(); } char dhseqr_(); static void _check_dhseqr_() { dhseqr_(); } char dsteqr_(); static void _check_dsteqr_() { dsteqr_(); } int main() { _check_dtrsen_(); _check_dgerfs_(); _check_dgges_(); _check_dtgsen_(); _check_dgesvd_(); _check_dgetrf_(); _check_dgetrs_(); _check_dgeev_(); _check_dgelss_(); _check_dsyev_(); _check_dsyevx_(); _check_dsygv_(); _check_dsygvx_(); _check_dpotrf_(); _check_dpotrs_(); _check_dstebz_(); _check_dpttrf_(); _check_dpttrs_(); _check_dstein_(); _check_dorgqr_(); _check_dgeqrf_(); _check_dgesv_(); _check_dhseqr_(); _check_dsteqr_();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C ================================================================================ TEST checklsame from config.packages.BlasLapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/BlasLapack.py:444) TESTING: checklsame from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:444) Do the BLAS/LAPACK libraries have a valid lsame() function with correction binding. Lion and xcode 4.2 do not Checking for functions [lsame_] in library ['-SSL2'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char lsame_(); static void _check_lsame_() { lsame_(); } int main() { _check_lsame_();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C ================================================================================ TEST checksdotreturnsdouble from config.packages.BlasLapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/BlasLapack.py:501) TESTING: checksdotreturnsdouble from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:501) Determines if BLAS sdot routine returns a float or a double Checking if sdot() returns a float or a double Pushing language C All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *output = fopen("runtimetestoutput","w"); extern float sdot_(int*,float*,int *,float*,int*); float x1[1] = {3.0}; int one1 = 1; float sdotresult = sdot_(&one1,x1,&one1,x1,&one1); fprintf(output, " '--known-sdot-returns-double=%d',\n",(sdotresult != 9.0)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack/conftest.o -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack/conftest Popping language C Checking if snrm() returns a float or a double Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *output = fopen("runtimetestoutput","w"); extern float snrm2_(int*,float*,int*); float x2[1] = {3.0}; int one2 = 1; float normresult = snrm2_(&one2,x2,&one2); fprintf(output, " '--known-snrm2-returns-double=%d',\n",(normresult != 3.0)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack/conftest.o -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack/conftest Popping language C ================================================================================ TEST alternateConfigureLibrary from config.packages.SuperLU_MT(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.SuperLU_MT(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.pARMS(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.pARMS(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.SuiteSparse(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.SuiteSparse(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.ml(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.ml(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.spai(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.spai(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.mkl_cpardiso(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.mkl_cpardiso(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.sundials(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.sundials(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.elemental(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.elemental(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST configureRegression from PETSc.Regression(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Regression.py:33) TESTING: configureRegression from PETSc.Regression(config/PETSc/Regression.py:33) Output a file listing the jobs that should be run by the PETSc buildtest Defined make macro "TEST_RUNS" to "C Fortran SSL OPENMP Cxx F90 F90_NoComplex F2003 Fortran_NoComplex C_NoComplex" ================================================================================ TEST alternateConfigureLibrary from config.packages.PaStiX(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.PaStiX(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default Pushing language C ================================================================================ TEST configureLibrary from config.packages.scalapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:572) TESTING: configureLibrary from config.packages.scalapack(config/BuildSystem/config/package.py:572) Find an installation and check if it can work with PETSc ================================================================================== Checking for a functional scalapack Checking for library in User specified SCALAPACK libraries: ['-SCALAPACK'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [pssytrd_] in library ['-SCALAPACK'] ['-SSL2'] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char pssytrd_(); static void _check_pssytrd_() { pssytrd_(); } int main() { _check_pssytrd_();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -SCALAPACK -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Checking for headers User specified SCALAPACK libraries: [] ================================================================================ TEST checkSharedLibrary from config.packages.scalapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:626) TESTING: checkSharedLibrary from config.packages.scalapack(config/BuildSystem/config/package.py:626) By default we don't care about checking if the library is shared Popping language C ================================================================================ TEST alternateConfigureLibrary from config.packages.MUMPS(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.MUMPS(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.mkl_pardiso(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.mkl_pardiso(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.SuperLU_DIST(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.SuperLU_DIST(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.SuperLU(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.SuperLU(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.Chombo(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.Chombo(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default Checking for functions [dgels_] in library ['-SSL2'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgels_(); static void _check_dgels_() { dgels_(); } int main() { _check_dgels_();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Found dgels() in Lapack library as needed by hypre Pushing language C ================================================================================ TEST configureLibrary from config.packages.hypre(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:572) TESTING: configureLibrary from config.packages.hypre(config/BuildSystem/config/package.py:572) Find an installation and check if it can work with PETSc ================================================================================== Checking for a functional hypre Checking for library in User specified root directory HYPRE: ['/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib/libHYPRE.a', '-ltrtmetcpp', '-L/opt/FJSVpxtof/sparc64fx/lib64', '-L/opt/FJSVtclang/GM-1.2.0-20/lib64', '-L//opt/FJSVtclang/GM-1.2.0-20/lib64', '-L/opt/FJSVxosmmm/lib64', '-lmpi_cxx', '-lfjdemgl', '-lstd_mt', '-lpthread', '-lstdc++'] Contents: ['lib', 'include'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [HYPRE_IJMatrixCreate] in library ['/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib/libHYPRE.a', '-ltrtmetcpp', '-L/opt/FJSVpxtof/sparc64fx/lib64', '-L/opt/FJSVtclang/GM-1.2.0-20/lib64', '-L//opt/FJSVtclang/GM-1.2.0-20/lib64', '-L/opt/FJSVxosmmm/lib64', '-lmpi_cxx', '-lfjdemgl', '-lstd_mt', '-lpthread', '-lstdc++'] ['-SSL2'] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char HYPRE_IJMatrixCreate(); static void _check_HYPRE_IJMatrixCreate() { HYPRE_IJMatrixCreate(); } int main() { _check_HYPRE_IJMatrixCreate();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -Wl,-rpath,/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -L/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -lHYPRE -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_LIBHYPRE" to "1" Defined "HAVE_LIBTRTMETCPP" to "1" Defined "HAVE_LIBMPI_CXX" to "1" Defined "HAVE_LIBFJDEMGL" to "1" Defined "HAVE_LIBSTD_MT" to "1" Defined "HAVE_LIBPTHREAD" to "1" Defined "HAVE_LIBSTDC__" to "1" Popping language C Checking for headers User specified root directory HYPRE: ['/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include'] Pushing language C ================================================================================ TEST checkInclude from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['HYPRE.h'] in ['/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include'] Checking include with compiler flags var CPPFLAGS ['/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include', '/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu'] Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" #line 1 "/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include/HYPRE.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Found header files ['HYPRE.h'] in ['/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include'] Popping language C ================================================================================ TEST checkSharedLibrary from config.packages.hypre(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:626) TESTING: checkSharedLibrary from config.packages.hypre(config/BuildSystem/config/package.py:626) By default we don't care about checking if the library is shared Popping language C ================================================================================ TEST alternateConfigureLibrary from config.packages.Trilinos(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.Trilinos(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST configureRTLDDefault from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:774) TESTING: configureRTLDDefault from PETSc.Configure(config/PETSc/Configure.py:774) All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c Possible ERROR while running compiler: exit code 512 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c", line 4: error: identifier "RTLD_DEFAULT" is undefined void *ptr = RTLD_DEFAULT; ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include void *ptr = RTLD_DEFAULT; int main() { ; return 0; } ================================================================================ TEST configurePrefetch from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:624) TESTING: configurePrefetch from PETSc.Configure(config/PETSc/Configure.py:624) Sees if there are any prefetch functions supported Executing: uname -s stdout: Linux Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c", line 3: catastrophic error: cannot open source file "xmmintrin.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { void *v = 0;_mm_prefetch((const char*)v,_MM_HINT_NTA); ; return 0; } Compile failed inside link Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c", line 3: catastrophic error: cannot open source file "xmmintrin.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { void *v = 0;_mm_prefetch(v,_MM_HINT_NTA); ; return 0; } Compile failed inside link Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { void *v = 0;__builtin_prefetch(v,0,0); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "Prefetch(a,b,c)" to "__builtin_prefetch((a),(b),(c))" Defined "PREFETCH_HINT_NTA" to "0" Defined "PREFETCH_HINT_T0" to "3" Defined "PREFETCH_HINT_T1" to "2" Defined "PREFETCH_HINT_T2" to "1" Popping language C ================================================================================ TEST configureUnused from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:685) TESTING: configureUnused from PETSc.Configure(config/PETSc/Configure.py:685) Sees if __attribute((unused)) is supported Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" __attribute((unused)) static int myfunc(__attribute((unused)) void *name){ return 1;} int main() { int i = 0; int j = myfunc(&i); typedef void* atype; __attribute((unused)) atype a; ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "UNUSED" to "__attribute((unused))" Popping language C ================================================================================ TEST configureDeprecated from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:703) TESTING: configureDeprecated from PETSc.Configure(config/PETSc/Configure.py:703) Check if __attribute((deprecated)) is supported Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c", line 3: warning: function "myfunc" was declared but never referenced __attribute((deprecated)) static int myfunc(void) { return 1;} ^ Source: #include "confdefs.h" #include "conffix.h" __attribute((deprecated)) static int myfunc(void) { return 1;} int main() { ; return 0; } Defined "DEPRECATED(why)" to "__attribute((deprecated))" Popping language C ================================================================================ TEST configureIsatty from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:697) TESTING: configureIsatty from PETSc.Configure(config/PETSc/Configure.py:697) Check if the Unix C function isatty() works correctly Actually just assumes it does not work correctly on batch systems Defined "USE_ISATTY" to "1" ================================================================================ TEST configureExpect from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:723) TESTING: configureExpect from PETSc.Configure(config/PETSc/Configure.py:723) Sees if the __builtin_expect directive is supported Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { if (__builtin_expect(0,1)) return 1;; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_BUILTIN_EXPECT" to "1" Popping language C ================================================================================ TEST configureFunctionName from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:730) TESTING: configureFunctionName from PETSc.Configure(config/PETSc/Configure.py:730) Sees if the compiler supports __func__ or a variant. Falls back on __FUNCT__ which PETSc source defines, but most users do not, thus stack traces through user code are better when the compiler's variant is used. Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { if (__func__[0] != 'm') return 1;; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Defined "FUNCTION_NAME_C" to "__func__" Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { if (__func__[0] != 'm') return 1;; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language Cxx Defined "FUNCTION_NAME_CXX" to "__func__" ================================================================================ TEST configureIntptrt from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:752) TESTING: configureIntptrt from PETSc.Configure(config/PETSc/Configure.py:752) Determine what to use for uintptr_t Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c", line 6: warning: variable "i" was declared but never referenced int x; uintptr_t i = (uintptr_t)&x;; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { int x; uintptr_t i = (uintptr_t)&x;; return 0; } Defined "UINTPTR_T" to "uintptr_t" Popping language C ================================================================================ TEST configureSolaris from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:779) TESTING: configureSolaris from PETSc.Configure(config/PETSc/Configure.py:779) Solaris specific stuff ================================================================================ TEST configureLinux from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:792) TESTING: configureLinux from PETSc.Configure(config/PETSc/Configure.py:792) Linux specific stuff Defined "HAVE_DOUBLE_ALIGN_MALLOC" to "1" ================================================================================ TEST configureWin32 from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:798) TESTING: configureWin32 from PETSc.Configure(config/PETSc/Configure.py:798) Win32 non-cygwin specific stuff Checking for functions [GetComputerName] in library ['Kernel32.lib'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c", line 4: catastrophic error: cannot open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_GetComputerName() { GetComputerName(NULL,NULL);; } int main() { _check_GetComputerName();; return 0; } Compile failed inside link Popping language C Checking for functions [GetComputerName] in library ['kernel32'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c", line 4: catastrophic error: cannot open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_GetComputerName() { GetComputerName(NULL,NULL);; } int main() { _check_GetComputerName();; return 0; } Compile failed inside link Popping language C Checking for functions [GetUserName] in library ['Advapi32.lib'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c", line 4: catastrophic error: cannot open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_GetUserName() { GetUserName(NULL,NULL);; } int main() { _check_GetUserName();; return 0; } Compile failed inside link Popping language C Checking for functions [GetUserName] in library ['advapi32'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c", line 4: catastrophic error: cannot open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_GetUserName() { GetUserName(NULL,NULL);; } int main() { _check_GetUserName();; return 0; } Compile failed inside link Popping language C Checking for functions [GetDC] in library ['User32.lib'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c", line 4: catastrophic error: cannot open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_GetDC() { GetDC(0);; } int main() { _check_GetDC();; return 0; } Compile failed inside link Popping language C Checking for functions [GetDC] in library ['user32'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c", line 4: catastrophic error: cannot open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_GetDC() { GetDC(0);; } int main() { _check_GetDC();; return 0; } Compile failed inside link Popping language C Checking for functions [CreateCompatibleDC] in library ['Gdi32.lib'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c", line 4: catastrophic error: cannot open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_CreateCompatibleDC() { CreateCompatibleDC(0);; } int main() { _check_CreateCompatibleDC();; return 0; } Compile failed inside link Popping language C Checking for functions [CreateCompatibleDC] in library ['gdi32'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c", line 4: catastrophic error: cannot open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_CreateCompatibleDC() { CreateCompatibleDC(0);; } int main() { _check_CreateCompatibleDC();; return 0; } Compile failed inside link Popping language C Checking for type: int32_t Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types/conftest.c", line 13: warning: variable "a" was declared but never referenced int32_t a;; ^ Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { int32_t a;; return 0; } int32_t found Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c", line 6: warning: variable "u" was declared but never referenced uid_t u; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { uid_t u; ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c", line 8: warning: variable "a" was declared but never referenced int a=R_OK; ^ Source: #include "confdefs.h" #include "conffix.h" #if defined(PETSC_HAVE_UNISTD_H) #include #endif int main() { int a=R_OK; ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int a=0; if (S_ISDIR(a)){} ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c", line 3: catastrophic error: cannot open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { LARGE_INTEGER a; DWORD b=a.u.HighPart; ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c", line 3: catastrophic error: cannot open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { int flags = O_BINARY;; return 0; } Defined "PATH_SEPARATOR" to "':'" Defined "REPLACE_DIR_SEPARATOR" to "'\\'" Defined "DIR_SEPARATOR" to "'/'" Defined "DIR" to ""/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3"" ================================================================================ TEST configureCygwinBrokenPipe from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:868) TESTING: configureCygwinBrokenPipe from PETSc.Configure(config/PETSc/Configure.py:868) Cygwin version <= 1.7.18 had issues with pipes and long commands invoked from gnu-make http://cygwin.com/ml/cygwin/2013-05/msg00340.html Executing: uname -s stdout: Linux ================================================================================ TEST configureDefaultArch from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:884) TESTING: configureDefaultArch from PETSc.Configure(config/PETSc/Configure.py:884) ================================================================================ TEST configureScript from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:901) TESTING: configureScript from PETSc.Configure(config/PETSc/Configure.py:901) Output a script in the conf directory which will reproduce the configuration ================================================================================ TEST configureInstall from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:938) TESTING: configureInstall from PETSc.Configure(config/PETSc/Configure.py:938) Setup the directories for installation Defined make rule "shared_install" with dependencies "" and code ['- at echo "Now to install the libraries do:"', '- at echo "make PETSC_DIR=${PETSC_DIR} PETSC_ARCH=${PETSC_ARCH} install"', '- at echo "========================================="'] ================================================================================ TEST configureGCOV from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:950) TESTING: configureGCOV from PETSc.Configure(config/PETSc/Configure.py:950) ================================================================================ TEST configureFortranFlush from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:955) TESTING: configureFortranFlush from PETSc.Configure(config/PETSc/Configure.py:955) Checking for functions [flush_] in library [''] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char flush_(); static void _check_flush_() { flush_(); } int main() { _check_flush_();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Defined "HAVE_FLUSH" to "1" ================================================================================ TEST configureAtoll from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:680) TESTING: configureAtoll from PETSc.Configure(config/PETSc/Configure.py:680) Checks if atoll exists Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #define _POSIX_C_SOURCE 200112L #include int main() { long v = atoll("25"); return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_ATOLL" to "1" Defined make rule "remote" with dependencies "" and code [] Defined make rule "remoteclean" with dependencies "" and code [] Pushing language C Defined make macro "CC_FLAGS" to "-Xg -O0 -Kopenmp " Popping language C Pushing language Cxx Defined make macro "CXX_FLAGS" to "-Xg -O0 -Kopenmp " Popping language Cxx Defined make macro "CPP_FLAGS" to "" Pushing language C Defined make macro "PCC" to "mpifcc" Defined make macro "PCC_FLAGS" to "-Xg -O0 -Kopenmp " Popping language C Defined make macro "CC_SUFFIX" to "o" Pushing language C Defined make macro "PCC_LINKER" to "mpifcc" Defined make macro "PCC_LINKER_FLAGS" to " -Xg -O0 -Kopenmp" Popping language C Defined make macro "CC_LINKER_SUFFIX" to "" Pushing language FC Defined "HAVE_FORTRAN" to "1" Defined make macro "FPP_FLAGS" to "" Defined make macro "FC_FLAGS" to "-X9 -O0 -Kopenmp " Popping language FC Defined make macro "FC_SUFFIX" to "o" Pushing language FC Executing: mpifrt -V Defined make macro "FC_LINKER" to "mpifrt" Defined make macro "FC_LINKER_FLAGS" to " -X9 -O0 -Kopenmp" Popping language FC Defined make macro "FC_MODULE_FLAG" to "-I" Defined make macro "FC_MODULE_OUTPUT_FLAG" to "-M" Pushing language C Defined make macro "SL_LINKER" to "mpifcc" Defined make macro "SL_LINKER_FLAGS" to "${PCC_LINKER_FLAGS}" Popping language C Defined make macro "SL_LINKER_SUFFIX" to "" Defined "SLSUFFIX" to """" Defined make macro "SL_LINKER_LIBS" to "${PETSC_EXTERNAL_LIB_BASIC}" Defined make macro "PETSC_LANGUAGE" to "CONLY" Defined make macro "PETSC_SCALAR" to "real" Defined make macro "PETSC_PRECISION" to "double" Executing: CC -VV Defined "USE_SOCKET_VIEWER" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-bEGQBD/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { setsockopt(0,SOL_SOCKET,SO_REUSEADDR,0,0); return 0; } Defined "HAVE_SO_REUSEADDR" to "1" Defined "HAVE_HYPRE" to "1" Defined make macro "HYPRE_LIB" to "-Wl,-rpath,/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -L/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -lHYPRE -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++" Defined make macro "HYPRE_INCLUDE" to "-I/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include" Defined make macro "SCALAPACK_LIB" to "-SCALAPACK" Defined make macro "SCALAPACK_INCLUDE" to "" Defined "HAVE_BLASLAPACK" to "1" Defined make macro "BLASLAPACK_LIB" to "-SSL2" Defined make macro "BLASLAPACK_INCLUDE" to "" Defined "HAVE_PTHREAD" to "1" Defined make macro "PTHREAD_LIB" to "" Defined make macro "PTHREAD_INCLUDE" to "" Defined "HAVE_OPENMP" to "1" Defined make macro "OPENMP_LIB" to "" Defined make macro "OPENMP_INCLUDE" to "" Defined "HAVE_SSL" to "1" Defined make macro "SSL_LIB" to "-lssl -lcrypto" Defined make macro "SSL_INCLUDE" to "" Defined "HAVE_MPI" to "1" Defined make macro "MPI_LIB" to "" Defined make macro "MPI_INCLUDE" to "-I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu" Defined make macro "PETSC_WITH_EXTERNAL_LIB" to "-L/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-3.6.3_patch_debug/lib -lpetsc -Wl,-rpath,/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -L/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -lHYPRE -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -SCALAPACK -SSL2 -lssl -lcrypto -ltrtmetcpp -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl " Defined make macro "PETSC_EXTERNAL_LIB_BASIC" to "-Wl,-rpath,/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -L/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -lHYPRE -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -SCALAPACK -SSL2 -lssl -lcrypto -ltrtmetcpp -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl " Defined make macro "PETSC_CC_INCLUDES" to "-I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/include -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-3.6.3_patch_debug/include -I/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu" Pushing language FC Popping language FC Pushing language FC Popping language FC Pushing language FC Popping language FC Pushing language FC Popping language FC Defined make macro "PETSC_FC_INCLUDES" to "-I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/include -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-3.6.3_patch_debug/include -I/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu" Defined make macro "DESTDIR" to "/home/hp150306/t00196/lib/petsc-3.6.3_patch_debug" Defined "LIB_DIR" to ""/home/hp150306/t00196/lib/petsc-3.6.3_patch_debug/lib"" Defined make macro "LIBNAME" to "${INSTALL_LIB_DIR}/libpetsc.${AR_LIB_SUFFIX}" Defined make macro "SHLIBS" to "libpetsc" Defined make macro "PETSC_LIB_BASIC" to "-lpetsc" Defined make macro "PETSC_KSP_LIB_BASIC" to "-lpetsc" Defined make macro "PETSC_TS_LIB_BASIC" to "-lpetsc" Defined make macro "PETSC_TAO_LIB_BASIC" to "-lpetsc" Defined "USE_SINGLE_LIBRARY" to "1" Defined make macro "PETSC_SYS_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_VEC_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_MAT_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_DM_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_KSP_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_SNES_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_TS_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_TAO_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_CHARACTERISTIC_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_CONTRIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "CONFIGURE_OPTIONS" to "--with-cc=mpifcc --with-cxx=mpiFCC --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS=\"-Xg -O0\" --CXX=mpiFCC --CXXFLAGS=\"-Xg -O0\" --FC=mpifrt --FFLAGS=\"-X9 -O0\" --LD_SHARED= --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 --with-scalapack-lib=-SCALAPACK --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_patch_debug --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 --with-hypre=1 --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4" Pushing language C Popping language C Pushing language FC Popping language FC Pushing language C Popping language C Pushing language FC Popping language FC Skipping cmakeboot due to old python version: (2, 6, 2, 'final', 0) Pushing language C Popping language C Pushing language FC Popping language FC ================================================================================ **** petsc-3.6.3_patch_debug/lib/petsc/conf/petscvariables **** FC_DEFINE_FLAG = -D FAST_AR_FLAGS = Scq AR_FLAGS = cr FC_MODULE_OUTPUT_FLAG = -M PETSC_LANGUAGE = CONLY FC_LINKER_FLAGS = -X9 -O0 -Kopenmp LIBNAME = ${INSTALL_LIB_DIR}/libpetsc.${AR_LIB_SUFFIX} SL_LINKER = mpifcc CC_FLAGS = -Xg -O0 -Kopenmp PETSC_LIB = ${PETSC_WITH_EXTERNAL_LIB} PETSC_PRECISION = double OPENMP_LIB = FC_FLAGS = -X9 -O0 -Kopenmp BLASLAPACK_LIB = -SSL2 PETSC_MAT_LIB = ${PETSC_WITH_EXTERNAL_LIB} PCC = mpifcc SL_LINKER_LIBS = ${PETSC_EXTERNAL_LIB_BASIC} MPI_LIB = SSL_LIB = -lssl -lcrypto PETSC_EXTERNAL_LIB_BASIC = -Wl,-rpath,/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -L/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -lHYPRE -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -SCALAPACK -SSL2 -lssl -lcrypto -ltrtmetcpp -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl SL_LINKER_FLAGS = ${PCC_LINKER_FLAGS} CC_SUFFIX = o OPENMP_INCLUDE = SCALAPACK_INCLUDE = SHLIBS = libpetsc CONFIGURE_OPTIONS = --with-cc=mpifcc --with-cxx=mpiFCC --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS=\"-Xg -O0\" --CXX=mpiFCC --CXXFLAGS=\"-Xg -O0\" --FC=mpifrt --FFLAGS=\"-X9 -O0\" --LD_SHARED= --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 --with-scalapack-lib=-SCALAPACK --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_patch_debug --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 --with-hypre=1 --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4 PETSC_CHARACTERISTIC_LIB = ${PETSC_WITH_EXTERNAL_LIB} PTHREAD_LIB = PETSC_SCALAR = real PETSC_FC_INCLUDES = -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/include -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-3.6.3_patch_debug/include -I/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu CPP_FLAGS = PETSC_KSP_LIB_BASIC = -lpetsc FPP_FLAGS = HYPRE_INCLUDE = -I/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include FC_LINKER = mpifrt HYPRE_LIB = -Wl,-rpath,/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -L/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -lHYPRE -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ PETSC_KSP_LIB = ${PETSC_WITH_EXTERNAL_LIB} CXX_FLAGS = -Xg -O0 -Kopenmp PETSC_LIB_BASIC = -lpetsc PCC_LINKER_FLAGS = -Xg -O0 -Kopenmp SSL_INCLUDE = PETSC_CONTRIB = ${PETSC_WITH_EXTERNAL_LIB} PETSC_CC_INCLUDES = -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/include -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-3.6.3_patch_debug/include -I/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu PCC_LINKER = mpifcc PETSC_SYS_LIB = ${PETSC_WITH_EXTERNAL_LIB} PCC_FLAGS = -Xg -O0 -Kopenmp PTHREAD_INCLUDE = PETSC_TS_LIB = ${PETSC_WITH_EXTERNAL_LIB} PETSC_TAO_LIB_BASIC = -lpetsc BLASLAPACK_INCLUDE = PETSC_TS_LIB_BASIC = -lpetsc PETSC_VEC_LIB = ${PETSC_WITH_EXTERNAL_LIB} CC_LINKER_SUFFIX = SL_LINKER_SUFFIX = PETSC_DM_LIB = ${PETSC_WITH_EXTERNAL_LIB} DESTDIR = /home/hp150306/t00196/lib/petsc-3.6.3_patch_debug FC_MODULE_FLAG = -I SCALAPACK_LIB = -SCALAPACK PETSC_WITH_EXTERNAL_LIB = -L/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-3.6.3_patch_debug/lib -lpetsc -Wl,-rpath,/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -L/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -lHYPRE -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -SCALAPACK -SSL2 -lssl -lcrypto -ltrtmetcpp -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl PETSC_TAO_LIB = ${PETSC_WITH_EXTERNAL_LIB} MPI_INCLUDE = -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu FC_SUFFIX = o PETSC_SNES_LIB = ${PETSC_WITH_EXTERNAL_LIB} SHELL = /bin/sh GREP = /bin/grep MV = /bin/mv PYTHON = /usr/bin/python MKDIR = /bin/mkdir -p SEDINPLACE = /bin/sed -i SED = /bin/sed DIFF = /usr/bin/diff -w GZIP = /bin/gzip RM = /bin/rm -f CP = /bin/cp CC_LINKER_SLFLAG = -Wl,-rpath, CC = mpifcc RANLIB = /usr/bin/ranlib DYNAMICLINKER = mpifcc CXX = mpiFCC FC = mpifrt CXXCPP = mpiFCC -E FC_LINKER_SLFLAG = -Wl,-rpath, CPP = mpifcc -E AR_LIB_SUFFIX = a LD_SHARED = /usr/bin/ar AR = /usr/bin/ar DIR = /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 PETSC_INDEX_SIZE = 32 OMAKE = /usr/bin/gmake --no-print-directory MAKE_IS_GNUMAKE = 1 MAKE = /usr/bin/gmake MAKE_NP = 7 OMAKE_PRINTDIR = /usr/bin/gmake --print-directory MPIEXEC = mpiexec PETSC_SCALAR_SIZE = 64 BUILDSHAREDLIB = no DSYMUTIL = true TEST_RUNS = C Fortran SSL OPENMP Cxx F90 F90_NoComplex F2003 Fortran_NoComplex C_NoComplex **** petsc-3.6.3_patch_debug/lib/petsc/conf/petscrules **** shared_install: - at echo "Now to install the libraries do:" - at echo "make PETSC_DIR=${PETSC_DIR} PETSC_ARCH=${PETSC_ARCH} install" - at echo "=========================================" remoteclean: remote: libc: ${LIBNAME}(${OBJSC}) libcxx: ${LIBNAME}(${OBJSCXX}) libcu: ${LIBNAME}(${OBJSCU}) libf: ${OBJSF} -${AR} ${AR_FLAGS} ${LIBNAME} ${OBJSF} .F.a: ${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FC_FLAGS} ${FFLAGS} ${FCPPFLAGS} $< -${AR} ${AR_FLAGS} ${LIBNAME} $*.o -${RM} $*.o .f.o .f90.o .f95.o: ${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FC_FLAGS} ${FFLAGS} -o $@ $< .f.a: ${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FC_FLAGS} ${FFLAGS} $< -${AR} ${AR_FLAGS} ${LIBNAME} $*.o -${RM} $*.o .F.o .F90.o .F95.o: ${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FC_FLAGS} ${FFLAGS} ${FCPPFLAGS} -o $@ $< shared_arch: petsc4py-build: petsc4py-install: mpi4py-build: mpi4py-install: **** petsc-3.6.3_patch_debug/include/petscconf.h **** #if !defined(INCLUDED_UNKNOWN) #define INCLUDED_UNKNOWN #ifndef IS_COLORING_MAX #define IS_COLORING_MAX 65535 #endif #ifndef STDC_HEADERS #define STDC_HEADERS 1 #endif #ifndef MPIU_COLORING_VALUE #define MPIU_COLORING_VALUE MPI_UNSIGNED_SHORT #endif #ifndef PETSC_UINTPTR_T #define PETSC_UINTPTR_T uintptr_t #endif #ifndef PETSC_HAVE_PTHREAD #define PETSC_HAVE_PTHREAD 1 #endif #ifndef PETSC_HAVE_OPENMP #define PETSC_HAVE_OPENMP 1 #endif #ifndef PETSC_DEPRECATED #define PETSC_DEPRECATED(why) __attribute((deprecated)) #endif #ifndef PETSC_REPLACE_DIR_SEPARATOR #define PETSC_REPLACE_DIR_SEPARATOR '\\' #endif #ifndef PETSC_HAVE_SO_REUSEADDR #define PETSC_HAVE_SO_REUSEADDR 1 #endif #ifndef PETSC_HAVE_MPI #define PETSC_HAVE_MPI 1 #endif #ifndef PETSC_PREFETCH_HINT_T2 #define PETSC_PREFETCH_HINT_T2 1 #endif #ifndef PETSC_PREFETCH_HINT_T0 #define PETSC_PREFETCH_HINT_T0 3 #endif #ifndef PETSC_PREFETCH_HINT_T1 #define PETSC_PREFETCH_HINT_T1 2 #endif #ifndef PETSC_USE_SOCKET_VIEWER #define PETSC_USE_SOCKET_VIEWER 1 #endif #ifndef PETSC_DIR #define PETSC_DIR "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3" #endif #ifndef PETSC_HAVE_SSL #define PETSC_HAVE_SSL 1 #endif #ifndef PETSC_HAVE_HYPRE #define PETSC_HAVE_HYPRE 1 #endif #ifndef PETSC_LIB_DIR #define PETSC_LIB_DIR "/home/hp150306/t00196/lib/petsc-3.6.3_patch_debug/lib" #endif #ifndef PETSC_HAVE_FORTRAN #define PETSC_HAVE_FORTRAN 1 #endif #ifndef PETSC_USE_ISATTY #define PETSC_USE_ISATTY 1 #endif #ifndef PETSC_SLSUFFIX #define PETSC_SLSUFFIX "" #endif #ifndef PETSC_FUNCTION_NAME_CXX #define PETSC_FUNCTION_NAME_CXX __func__ #endif #ifndef PETSC_HAVE_FLUSH #define PETSC_HAVE_FLUSH 1 #endif #ifndef PETSC_HAVE_ATOLL #define PETSC_HAVE_ATOLL 1 #endif #ifndef PETSC_HAVE_DOUBLE_ALIGN_MALLOC #define PETSC_HAVE_DOUBLE_ALIGN_MALLOC 1 #endif #ifndef PETSC_UNUSED #define PETSC_UNUSED __attribute((unused)) #endif #ifndef PETSC_FUNCTION_NAME_C #define PETSC_FUNCTION_NAME_C __func__ #endif #ifndef PETSC_USE_SINGLE_LIBRARY #define PETSC_USE_SINGLE_LIBRARY 1 #endif #ifndef PETSC_HAVE_BUILTIN_EXPECT #define PETSC_HAVE_BUILTIN_EXPECT 1 #endif #ifndef PETSC_DIR_SEPARATOR #define PETSC_DIR_SEPARATOR '/' #endif #ifndef PETSC_PATH_SEPARATOR #define PETSC_PATH_SEPARATOR ':' #endif #ifndef PETSC_PREFETCH_HINT_NTA #define PETSC_PREFETCH_HINT_NTA 0 #endif #ifndef PETSC_Prefetch #define PETSC_Prefetch(a,b,c) __builtin_prefetch((a),(b),(c)) #endif #ifndef PETSC_HAVE_BLASLAPACK #define PETSC_HAVE_BLASLAPACK 1 #endif #ifndef PETSC_HAVE_GZIP #define PETSC_HAVE_GZIP 1 #endif #ifndef PETSC_HAVE_STRING_H #define PETSC_HAVE_STRING_H 1 #endif #ifndef PETSC_HAVE_SYS_TYPES_H #define PETSC_HAVE_SYS_TYPES_H 1 #endif #ifndef PETSC_HAVE_ENDIAN_H #define PETSC_HAVE_ENDIAN_H 1 #endif #ifndef PETSC_HAVE_SYS_PROCFS_H #define PETSC_HAVE_SYS_PROCFS_H 1 #endif #ifndef PETSC_HAVE_DLFCN_H #define PETSC_HAVE_DLFCN_H 1 #endif #ifndef PETSC_HAVE_SCHED_H #define PETSC_HAVE_SCHED_H 1 #endif #ifndef PETSC_HAVE_STDINT_H #define PETSC_HAVE_STDINT_H 1 #endif #ifndef PETSC_HAVE_LINUX_KERNEL_H #define PETSC_HAVE_LINUX_KERNEL_H 1 #endif #ifndef PETSC_HAVE_TIME_H #define PETSC_HAVE_TIME_H 1 #endif #ifndef PETSC_HAVE_MATH_H #define PETSC_HAVE_MATH_H 1 #endif #ifndef PETSC_TIME_WITH_SYS_TIME #define PETSC_TIME_WITH_SYS_TIME 1 #endif #ifndef PETSC_HAVE_SYS_PARAM_H #define PETSC_HAVE_SYS_PARAM_H 1 #endif #ifndef PETSC_HAVE_PTHREAD_H #define PETSC_HAVE_PTHREAD_H 1 #endif #ifndef PETSC_HAVE_UNISTD_H #define PETSC_HAVE_UNISTD_H 1 #endif #ifndef PETSC_HAVE_STDLIB_H #define PETSC_HAVE_STDLIB_H 1 #endif #ifndef PETSC_HAVE_SYS_WAIT_H #define PETSC_HAVE_SYS_WAIT_H 1 #endif #ifndef PETSC_HAVE_SETJMP_H #define PETSC_HAVE_SETJMP_H 1 #endif #ifndef PETSC_HAVE_LIMITS_H #define PETSC_HAVE_LIMITS_H 1 #endif #ifndef PETSC_HAVE_SYS_UTSNAME_H #define PETSC_HAVE_SYS_UTSNAME_H 1 #endif #ifndef PETSC_HAVE_NETINET_IN_H #define PETSC_HAVE_NETINET_IN_H 1 #endif #ifndef PETSC_HAVE_SYS_SOCKET_H #define PETSC_HAVE_SYS_SOCKET_H 1 #endif #ifndef PETSC_HAVE_FLOAT_H #define PETSC_HAVE_FLOAT_H 1 #endif #ifndef PETSC_HAVE_SEARCH_H #define PETSC_HAVE_SEARCH_H 1 #endif #ifndef PETSC_HAVE_SYS_RESOURCE_H #define PETSC_HAVE_SYS_RESOURCE_H 1 #endif #ifndef PETSC_HAVE_SYS_TIMES_H #define PETSC_HAVE_SYS_TIMES_H 1 #endif #ifndef PETSC_HAVE_NETDB_H #define PETSC_HAVE_NETDB_H 1 #endif #ifndef PETSC_HAVE_MALLOC_H #define PETSC_HAVE_MALLOC_H 1 #endif #ifndef PETSC_HAVE_PWD_H #define PETSC_HAVE_PWD_H 1 #endif #ifndef PETSC_HAVE_FCNTL_H #define PETSC_HAVE_FCNTL_H 1 #endif #ifndef PETSC_HAVE_STRINGS_H #define PETSC_HAVE_STRINGS_H 1 #endif #ifndef PETSC_HAVE_SYS_SYSINFO_H #define PETSC_HAVE_SYS_SYSINFO_H 1 #endif #ifndef PETSC_HAVE_SYS_TIME_H #define PETSC_HAVE_SYS_TIME_H 1 #endif #ifndef PETSC_USING_F90 #define PETSC_USING_F90 1 #endif #ifndef PETSC_USING_F2003 #define PETSC_USING_F2003 1 #endif #ifndef PETSC_HAVE_RTLD_NOW #define PETSC_HAVE_RTLD_NOW 1 #endif #ifndef PETSC_HAVE_RTLD_LOCAL #define PETSC_HAVE_RTLD_LOCAL 1 #endif #ifndef PETSC_HAVE_RTLD_LAZY #define PETSC_HAVE_RTLD_LAZY 1 #endif #ifndef PETSC_C_STATIC_INLINE #define PETSC_C_STATIC_INLINE static inline #endif #ifndef PETSC_HAVE_FORTRAN_UNDERSCORE #define PETSC_HAVE_FORTRAN_UNDERSCORE 1 #endif #ifndef PETSC_HAVE_CXX_NAMESPACE #define PETSC_HAVE_CXX_NAMESPACE 1 #endif #ifndef PETSC_HAVE_RTLD_GLOBAL #define PETSC_HAVE_RTLD_GLOBAL 1 #endif #ifndef PETSC_C_RESTRICT #define PETSC_C_RESTRICT __restrict__ #endif #ifndef PETSC_CXX_RESTRICT #define PETSC_CXX_RESTRICT __restrict__ #endif #ifndef PETSC_CXX_STATIC_INLINE #define PETSC_CXX_STATIC_INLINE static inline #endif #ifndef PETSC_HAVE_F90_2PTR_ARG #define PETSC_HAVE_F90_2PTR_ARG 1 #endif #ifndef PETSC_HAVE_LIBZ #define PETSC_HAVE_LIBZ 1 #endif #ifndef PETSC_HAVE_LIBDL #define PETSC_HAVE_LIBDL 1 #endif #ifndef PETSC_HAVE_LIBSTDC__ #define PETSC_HAVE_LIBSTDC__ 1 #endif #ifndef PETSC_HAVE_LIBPTHREAD #define PETSC_HAVE_LIBPTHREAD 1 #endif #ifndef PETSC_HAVE_LIBCRYPTO #define PETSC_HAVE_LIBCRYPTO 1 #endif #ifndef PETSC_HAVE_FENV_H #define PETSC_HAVE_FENV_H 1 #endif #ifndef PETSC_HAVE_LIBHYPRE #define PETSC_HAVE_LIBHYPRE 1 #endif #ifndef PETSC_HAVE_LOG2 #define PETSC_HAVE_LOG2 1 #endif #ifndef PETSC_HAVE_LIBSTD_MT #define PETSC_HAVE_LIBSTD_MT 1 #endif #ifndef PETSC_HAVE_LIBMPI_CXX #define PETSC_HAVE_LIBMPI_CXX 1 #endif #ifndef PETSC_HAVE_ERF #define PETSC_HAVE_ERF 1 #endif #ifndef PETSC_HAVE_LIBSSL #define PETSC_HAVE_LIBSSL 1 #endif #ifndef PETSC_HAVE_LIBTRTMETCPP #define PETSC_HAVE_LIBTRTMETCPP 1 #endif #ifndef PETSC_HAVE_TGAMMA #define PETSC_HAVE_TGAMMA 1 #endif #ifndef PETSC_HAVE_LIBFJDEMGL #define PETSC_HAVE_LIBFJDEMGL 1 #endif #ifndef PETSC_ARCH #define PETSC_ARCH "petsc-3.6.3_patch_debug" #endif #ifndef PETSC_CLANGUAGE_C #define PETSC_CLANGUAGE_C 1 #endif #ifndef PETSC_USE_ERRORCHECKING #define PETSC_USE_ERRORCHECKING 1 #endif #ifndef PETSC_WORDS_BIGENDIAN #define PETSC_WORDS_BIGENDIAN 1 #endif #ifndef PETSC_BITS_PER_BYTE #define PETSC_BITS_PER_BYTE 8 #endif #ifndef PETSC_SIZEOF_MPI_FINT #define PETSC_SIZEOF_MPI_FINT 4 #endif #ifndef PETSC_SIZEOF_VOID_P #define PETSC_SIZEOF_VOID_P 8 #endif #ifndef PETSC_RETSIGTYPE #define PETSC_RETSIGTYPE void #endif #ifndef PETSC_HAVE_CXX_COMPLEX #define PETSC_HAVE_CXX_COMPLEX 1 #endif #ifndef PETSC_SIZEOF_LONG #define PETSC_SIZEOF_LONG 8 #endif #ifndef PETSC_USE_FORTRANKIND #define PETSC_USE_FORTRANKIND 1 #endif #ifndef PETSC_SIZEOF_SIZE_T #define PETSC_SIZEOF_SIZE_T 8 #endif #ifndef PETSC_HAVE_SIGINFO_T #define PETSC_HAVE_SIGINFO_T 1 #endif #ifndef PETSC_SIZEOF_CHAR #define PETSC_SIZEOF_CHAR 1 #endif #ifndef PETSC_SIZEOF_DOUBLE #define PETSC_SIZEOF_DOUBLE 8 #endif #ifndef PETSC_SIZEOF_FLOAT #define PETSC_SIZEOF_FLOAT 4 #endif #ifndef PETSC_HAVE_C99_COMPLEX #define PETSC_HAVE_C99_COMPLEX 1 #endif #ifndef PETSC_SIZEOF_INT #define PETSC_SIZEOF_INT 4 #endif #ifndef PETSC_SIZEOF_LONG_LONG #define PETSC_SIZEOF_LONG_LONG 8 #endif #ifndef PETSC_SIZEOF_MPI_COMM #define PETSC_SIZEOF_MPI_COMM 8 #endif #ifndef PETSC_SIZEOF_SHORT #define PETSC_SIZEOF_SHORT 2 #endif #ifndef PETSC_HAVE_STRCASECMP #define PETSC_HAVE_STRCASECMP 1 #endif #ifndef PETSC_HAVE_GET_NPROCS #define PETSC_HAVE_GET_NPROCS 1 #endif #ifndef PETSC_HAVE_POPEN #define PETSC_HAVE_POPEN 1 #endif #ifndef PETSC_HAVE_SIGSET #define PETSC_HAVE_SIGSET 1 #endif #ifndef PETSC_HAVE_GETWD #define PETSC_HAVE_GETWD 1 #endif #ifndef PETSC_HAVE_VSNPRINTF #define PETSC_HAVE_VSNPRINTF 1 #endif #ifndef PETSC_HAVE_TIMES #define PETSC_HAVE_TIMES 1 #endif #ifndef PETSC_HAVE_DLSYM #define PETSC_HAVE_DLSYM 1 #endif #ifndef PETSC_HAVE_SNPRINTF #define PETSC_HAVE_SNPRINTF 1 #endif #ifndef PETSC_HAVE_GETHOSTBYNAME #define PETSC_HAVE_GETHOSTBYNAME 1 #endif #ifndef PETSC_HAVE_GETCWD #define PETSC_HAVE_GETCWD 1 #endif #ifndef PETSC_HAVE_DLERROR #define PETSC_HAVE_DLERROR 1 #endif #ifndef PETSC_HAVE_FORK #define PETSC_HAVE_FORK 1 #endif #ifndef PETSC_HAVE_RAND #define PETSC_HAVE_RAND 1 #endif #ifndef PETSC_HAVE_GETTIMEOFDAY #define PETSC_HAVE_GETTIMEOFDAY 1 #endif #ifndef PETSC_HAVE_DLCLOSE #define PETSC_HAVE_DLCLOSE 1 #endif #ifndef PETSC_HAVE_UNAME #define PETSC_HAVE_UNAME 1 #endif #ifndef PETSC_HAVE_GETHOSTNAME #define PETSC_HAVE_GETHOSTNAME 1 #endif #ifndef PETSC_HAVE_MKSTEMP #define PETSC_HAVE_MKSTEMP 1 #endif #ifndef PETSC_HAVE_SIGACTION #define PETSC_HAVE_SIGACTION 1 #endif #ifndef PETSC_HAVE_DRAND48 #define PETSC_HAVE_DRAND48 1 #endif #ifndef PETSC_HAVE_MEMALIGN #define PETSC_HAVE_MEMALIGN 1 #endif #ifndef PETSC_HAVE_VA_COPY #define PETSC_HAVE_VA_COPY 1 #endif #ifndef PETSC_HAVE_CLOCK #define PETSC_HAVE_CLOCK 1 #endif #ifndef PETSC_HAVE_ACCESS #define PETSC_HAVE_ACCESS 1 #endif #ifndef PETSC_HAVE_SIGNAL #define PETSC_HAVE_SIGNAL 1 #endif #ifndef PETSC_HAVE_USLEEP #define PETSC_HAVE_USLEEP 1 #endif #ifndef PETSC_HAVE_GETRUSAGE #define PETSC_HAVE_GETRUSAGE 1 #endif #ifndef PETSC_HAVE_VFPRINTF #define PETSC_HAVE_VFPRINTF 1 #endif #ifndef PETSC_HAVE_NANOSLEEP #define PETSC_HAVE_NANOSLEEP 1 #endif #ifndef PETSC_HAVE_GETDOMAINNAME #define PETSC_HAVE_GETDOMAINNAME 1 #endif #ifndef PETSC_HAVE_TIME #define PETSC_HAVE_TIME 1 #endif #ifndef PETSC_HAVE_LSEEK #define PETSC_HAVE_LSEEK 1 #endif #ifndef PETSC_HAVE_SOCKET #define PETSC_HAVE_SOCKET 1 #endif #ifndef PETSC_HAVE_SYSINFO #define PETSC_HAVE_SYSINFO 1 #endif #ifndef PETSC_HAVE_READLINK #define PETSC_HAVE_READLINK 1 #endif #ifndef PETSC_HAVE_REALPATH #define PETSC_HAVE_REALPATH 1 #endif #ifndef PETSC_HAVE_DLOPEN #define PETSC_HAVE_DLOPEN 1 #endif #ifndef PETSC_HAVE_MEMMOVE #define PETSC_HAVE_MEMMOVE 1 #endif #ifndef PETSC_SIGNAL_CAST #define PETSC_SIGNAL_CAST #endif #ifndef PETSC_HAVE_SLEEP #define PETSC_HAVE_SLEEP 1 #endif #ifndef PETSC_HAVE_VPRINTF #define PETSC_HAVE_VPRINTF 1 #endif #ifndef PETSC_HAVE_BZERO #define PETSC_HAVE_BZERO 1 #endif #ifndef PETSC_HAVE_GETPAGESIZE #define PETSC_HAVE_GETPAGESIZE 1 #endif #ifndef PETSC_CPU_RELAX #define PETSC_CPU_RELAX() __asm__ __volatile__ ("":::"memory") #endif #ifndef PETSC_BLASLAPACK_UNDERSCORE #define PETSC_BLASLAPACK_UNDERSCORE 1 #endif #ifndef PETSC_HAVE_MPI_F90MODULE #define PETSC_HAVE_MPI_F90MODULE 1 #endif #ifndef PETSC_HAVE_MPI_IALLREDUCE #define PETSC_HAVE_MPI_IALLREDUCE 1 #endif #ifndef PETSC_HAVE_OMPI_MINOR_VERSION #define PETSC_HAVE_OMPI_MINOR_VERSION 6 #endif #ifndef PETSC_HAVE_MPI_IN_PLACE #define PETSC_HAVE_MPI_IN_PLACE 1 #endif #ifndef PETSC_HAVE_MPI_COMM_C2F #define PETSC_HAVE_MPI_COMM_C2F 1 #endif #ifndef PETSC_HAVE_MPI_COMBINER_CONTIGUOUS #define PETSC_HAVE_MPI_COMBINER_CONTIGUOUS 1 #endif #ifndef PETSC_HAVE_MPI_TYPE_GET_EXTENT #define PETSC_HAVE_MPI_TYPE_GET_EXTENT 1 #endif #ifndef PETSC_HAVE_MPI_WIN_CREATE #define PETSC_HAVE_MPI_WIN_CREATE 1 #endif #ifndef PETSC_HAVE_MPI_TYPE_DUP #define PETSC_HAVE_MPI_TYPE_DUP 1 #endif #ifndef PETSC_HAVE_MPI_INIT_THREAD #define PETSC_HAVE_MPI_INIT_THREAD 1 #endif #ifndef PETSC_HAVE_MPI_COMM_F2C #define PETSC_HAVE_MPI_COMM_F2C 1 #endif #ifndef PETSC_HAVE_MPI_TYPE_GET_ENVELOPE #define PETSC_HAVE_MPI_TYPE_GET_ENVELOPE 1 #endif #ifndef PETSC_HAVE_MPI_ALLTOALLW #define PETSC_HAVE_MPI_ALLTOALLW 1 #endif #ifndef PETSC_HAVE_OMPI_MAJOR_VERSION #define PETSC_HAVE_OMPI_MAJOR_VERSION 1 #endif #ifndef PETSC_HAVE_MPIIO #define PETSC_HAVE_MPIIO 1 #endif #ifndef PETSC_HAVE_MPI_COMM_SPAWN #define PETSC_HAVE_MPI_COMM_SPAWN 1 #endif #ifndef PETSC_HAVE_MPI_FINT #define PETSC_HAVE_MPI_FINT 1 #endif #ifndef PETSC_HAVE_MPI_IBARRIER #define PETSC_HAVE_MPI_IBARRIER 1 #endif #ifndef PETSC_HAVE_MPI_FINALIZED #define PETSC_HAVE_MPI_FINALIZED 1 #endif #ifndef PETSC_HAVE_OMPI_RELEASE_VERSION #define PETSC_HAVE_OMPI_RELEASE_VERSION 3 #endif #ifndef PETSC_HAVE_MPI_REPLACE #define PETSC_HAVE_MPI_REPLACE 1 #endif #ifndef PETSC_HAVE_MPI_EXSCAN #define PETSC_HAVE_MPI_EXSCAN 1 #endif #ifndef PETSC_HAVE_MPI_COMBINER_DUP #define PETSC_HAVE_MPI_COMBINER_DUP 1 #endif #ifndef PETSC_USE_INFO #define PETSC_USE_INFO 1 #endif #ifndef PETSC_Alignx #define PETSC_Alignx(a,b) #endif #ifndef PETSC_USE_BACKWARD_LOOP #define PETSC_USE_BACKWARD_LOOP 1 #endif #ifndef PETSC_USE_DEBUG #define PETSC_USE_DEBUG 1 #endif #ifndef PETSC_IS_COLOR_VALUE_TYPE_SIZE #define PETSC_IS_COLOR_VALUE_TYPE_SIZE PETSC_SIZEOF_SHORT #endif #ifndef PETSC_USE_LOG #define PETSC_USE_LOG 1 #endif #ifndef PETSC_IS_COLOR_VALUE_TYPE #define PETSC_IS_COLOR_VALUE_TYPE short #endif #ifndef PETSC_USE_CTABLE #define PETSC_USE_CTABLE 1 #endif #ifndef PETSC_MEMALIGN #define PETSC_MEMALIGN 16 #endif #ifndef PETSC_USE_FORTRAN_INTERFACES #define PETSC_USE_FORTRAN_INTERFACES 1 #endif #ifndef PETSC_USE_SCALAR_REAL #define PETSC_USE_SCALAR_REAL 1 #endif #ifndef PETSC_HAVE_ISINF #define PETSC_HAVE_ISINF 1 #endif #ifndef PETSC_HAVE_ISNAN #define PETSC_HAVE_ISNAN 1 #endif #ifndef PETSC_USE_REAL_DOUBLE #define PETSC_USE_REAL_DOUBLE 1 #endif #ifndef PETSC_HAVE_DYNAMIC_LIBRARIES #define PETSC_HAVE_DYNAMIC_LIBRARIES 1 #endif #ifndef PETSC_HAVE_SHARED_LIBRARIES #define PETSC_HAVE_SHARED_LIBRARIES 1 #endif #ifndef PETSC__GNU_SOURCE #define PETSC__GNU_SOURCE 1 #endif #ifndef PETSC__BSD_SOURCE #define PETSC__BSD_SOURCE 1 #endif #ifndef PETSC__DEFAULT_SOURCE #define PETSC__DEFAULT_SOURCE 1 #endif #ifndef PETSC_LEVEL1_DCACHE_LINESIZE #define PETSC_LEVEL1_DCACHE_LINESIZE 32 #endif #ifndef PETSC_LEVEL1_DCACHE_SIZE #define PETSC_LEVEL1_DCACHE_SIZE 32768 #endif #ifndef PETSC_HAVE_FORTRAN_GET_COMMAND_ARGUMENT #define PETSC_HAVE_FORTRAN_GET_COMMAND_ARGUMENT 1 #endif #ifndef PETSC_USE_PROC_FOR_SIZE #define PETSC_USE_PROC_FOR_SIZE 1 #endif #ifndef PETSC_HAVE_SCHED_CPU_SET_T #define PETSC_HAVE_SCHED_CPU_SET_T 1 #endif #ifndef PETSC_HAVE_PTHREAD_BARRIER_T #define PETSC_HAVE_PTHREAD_BARRIER_T 1 #endif #ifndef PETSC_HAVE_SYS_SYSCTL_H #define PETSC_HAVE_SYS_SYSCTL_H 1 #endif #endif **** petsc-3.6.3_patch_debug/include/petscfix.h **** #if !defined(INCLUDED_UNKNOWN) #define INCLUDED_UNKNOWN #if defined(__cplusplus) extern "C" { } #else #endif #endif Configure Actions These are the actions performed by configure on the filesystem ----------------------------------------------------------------- PETSc: Build : Set default architecture to petsc-3.6.3_patch_debug in lib/petsc/conf/petscvariables File creation : Created petsc-3.6.3_patch_debug/lib/petsc/conf/reconfigure-petsc-3.6.3_patch_debug.py for automatic reconfiguration Framework: File creation : Created makefile configure header petsc-3.6.3_patch_debug/lib/petsc/conf/petscvariables File creation : Created makefile configure header petsc-3.6.3_patch_debug/lib/petsc/conf/petscrules File creation : Created configure header petsc-3.6.3_patch_debug/include/petscconf.h File creation : Created C specific configure header petsc-3.6.3_patch_debug/include/petscfix.h Pushing language C Popping language C Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Compilers: C Compiler: mpifcc -Xg -O0 -Kopenmp C++ Compiler: mpiFCC -Xg -O0 -Kopenmp Fortran Compiler: mpifrt -X9 -O0 -Kopenmp Linkers: Static linker: /usr/bin/ar cr Dynamic linker: mpifcc -shared -Xg -O0 -Kopenmp make: BLAS/LAPACK: -SSL2 MPI: Includes: -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu pthread: hypre: Includes: -I/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include Library: -Wl,-rpath,/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -L/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -lHYPRE -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ openmp: scalapack: Library: -SCALAPACK Arch: ssl: Library: -lssl -lcrypto PETSc: PETSC_ARCH: petsc-3.6.3_patch_debug PETSC_DIR: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 Clanguage: C Integer size: 32 Memory alignment: 16 Scalar type: real Precision: double shared libraries: disabled xxx=========================================================================xxx Configure stage complete. Now build PETSc libraries with (gnumake build): make PETSC_DIR=/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 PETSC_ARCH=petsc-3.6.3_patch_debug all xxx=========================================================================xxx ================================================================================ Finishing Configure Run at Thu Jun 2 10:43:37 2016 ================================================================================ -------------- next part -------------- Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC ================================================================================ ================================================================================ Starting Configure Run at Thu May 26 15:51:50 2016 Configure Options: --configModules=PETSc.Configure --optionsModule=config.compilerOptions --with-cc=mpifcc --with-cxx=mpiFCC --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" --LD_SHARED= --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 --with-scalapack-lib=-SCALAPACK --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 --with-hypre=1 --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4 Working directory: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 Machine platform: ('Linux', 'o05-037', '2.6.25.8', '#1 SMP Wed Jan 6 11:32:25 JST 2016', 's64fx', 's64fx') Python version: 2.6.2 (r262:71600, Dec 20 2011, 15:18:11) [GCC 4.2.4] ================================================================================ Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC ================================================================================ TEST configureExternalPackagesDir from config.framework(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/framework.py:832) TESTING: configureExternalPackagesDir from config.framework(config/BuildSystem/config/framework.py:832) ================================================================================ TEST configureDebuggers from config.utilities.debuggers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/debuggers.py:22) TESTING: configureDebuggers from config.utilities.debuggers(config/BuildSystem/config/utilities/debuggers.py:22) Find a default debugger and determine its arguments Checking for program /opt/FJSVtclang/check/gdb...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/gdb...not found Checking for program /opt/kusu/bin/gdb...not found Checking for program /opt/kusu/sbin/gdb...not found Checking for program /usr/pgsql-9.0/bin/gdb...not found Checking for program /usr/local/bin/gdb...not found Checking for program /bin/gdb...not found Checking for program /usr/bin/gdb...not found Checking for program /home/hp150306/t00196/bin/gdb...not found Checking for program /home/hp150306/t00196/shortcut/gdb...not found Checking for program /opt/FJSVxosmmm/sbin/gdb...not found Checking for program /home/hp150306/t00196/gdb...not found Checking for program /opt/FJSVtclang/check/dbx...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/dbx...not found Checking for program /opt/kusu/bin/dbx...not found Checking for program /opt/kusu/sbin/dbx...not found Checking for program /usr/pgsql-9.0/bin/dbx...not found Checking for program /usr/local/bin/dbx...not found Checking for program /bin/dbx...not found Checking for program /usr/bin/dbx...not found Checking for program /home/hp150306/t00196/bin/dbx...not found Checking for program /home/hp150306/t00196/shortcut/dbx...not found Checking for program /opt/FJSVxosmmm/sbin/dbx...not found Checking for program /home/hp150306/t00196/dbx...not found Checking for program /opt/FJSVtclang/check/xdb...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/xdb...not found Checking for program /opt/kusu/bin/xdb...not found Checking for program /opt/kusu/sbin/xdb...not found Checking for program /usr/pgsql-9.0/bin/xdb...not found Checking for program /usr/local/bin/xdb...not found Checking for program /bin/xdb...not found Checking for program /usr/bin/xdb...not found Checking for program /home/hp150306/t00196/bin/xdb...not found Checking for program /home/hp150306/t00196/shortcut/xdb...not found Checking for program /opt/FJSVxosmmm/sbin/xdb...not found Checking for program /home/hp150306/t00196/xdb...not found Checking for program /opt/FJSVtclang/check/dsymutil...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/dsymutil...not found Checking for program /opt/kusu/bin/dsymutil...not found Checking for program /opt/kusu/sbin/dsymutil...not found Checking for program /usr/pgsql-9.0/bin/dsymutil...not found Checking for program /usr/local/bin/dsymutil...not found Checking for program /bin/dsymutil...not found Checking for program /usr/bin/dsymutil...not found Checking for program /home/hp150306/t00196/bin/dsymutil...not found Checking for program /home/hp150306/t00196/shortcut/dsymutil...not found Checking for program /opt/FJSVxosmmm/sbin/dsymutil...not found Checking for program /home/hp150306/t00196/dsymutil...not found Defined make macro "DSYMUTIL" to "true" ================================================================================ TEST configureGit from config.sourceControl(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/sourceControl.py:24) TESTING: configureGit from config.sourceControl(config/BuildSystem/config/sourceControl.py:24) Find the Git executable Checking for program /opt/FJSVtclang/check/git...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/git...not found Checking for program /opt/kusu/bin/git...not found Checking for program /opt/kusu/sbin/git...not found Checking for program /usr/pgsql-9.0/bin/git...not found Checking for program /usr/local/bin/git...not found Checking for program /bin/git...not found Checking for program /usr/bin/git...not found Checking for program /home/hp150306/t00196/bin/git...not found Checking for program /home/hp150306/t00196/shortcut/git...not found Checking for program /opt/FJSVxosmmm/sbin/git...not found Checking for program /home/hp150306/t00196/git...not found ================================================================================ TEST configureCLanguage from PETSc.options.languages(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/languages.py:27) TESTING: configureCLanguage from PETSc.options.languages(config/PETSc/options/languages.py:27) Choose whether to compile the PETSc library using a C or C++ compiler C language is C Defined "CLANGUAGE_C" to "1" ================================================================================ TEST configureDirectories from PETSc.options.petscdir(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/petscdir.py:23) TESTING: configureDirectories from PETSc.options.petscdir(config/PETSc/options/petscdir.py:23) Checks PETSC_DIR and sets if not set Version Information: #define PETSC_VERSION_RELEASE 1 #define PETSC_VERSION_MAJOR 3 #define PETSC_VERSION_MINOR 6 #define PETSC_VERSION_SUBMINOR 3 #define PETSC_VERSION_PATCH 0 #define PETSC_VERSION_DATE "Dec, 03, 2015" #define PETSC_VERSION_GIT "v3.6.2-37-g6fc57b5" #define PETSC_VERSION_DATE_GIT "2015-12-03 23:02:05 -0600" #define PETSC_VERSION_(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_LT(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_LE(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_GT(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_GE(MAJOR,MINOR,SUBMINOR) \ Defined make macro "DIR" to "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3" ================================================================================ TEST getDatafilespath from PETSc.options.dataFilesPath(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/dataFilesPath.py:29) TESTING: getDatafilespath from PETSc.options.dataFilesPath(config/PETSc/options/dataFilesPath.py:29) Checks what DATAFILESPATH should be ================================================================================ TEST configureInstallationMethod from PETSc.options.petscclone(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/petscclone.py:20) TESTING: configureInstallationMethod from PETSc.options.petscclone(config/PETSc/options/petscclone.py:20) This is a tarball installation ================================================================================ TEST configureArchitecture from PETSc.options.arch(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/arch.py:25) TESTING: configureArchitecture from PETSc.options.arch(config/PETSc/options/arch.py:25) Checks PETSC_ARCH and sets if not set Defined "ARCH" to ""petsc-3.6.3_debug"" ================================================================================ TEST setInstallDir from PETSc.options.installDir(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/installDir.py:35) TESTING: setInstallDir from PETSc.options.installDir(config/PETSc/options/installDir.py:35) setup installDir to either prefix or if that is not set to PETSC_DIR/PETSC_ARCH ================================================================================ TEST saveReconfigure from PETSc.options.installDir(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/installDir.py:74) TESTING: saveReconfigure from PETSc.options.installDir(config/PETSc/options/installDir.py:74) ================================================================================ TEST cleanInstallDir from PETSc.options.installDir(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/installDir.py:67) TESTING: cleanInstallDir from PETSc.options.installDir(config/PETSc/options/installDir.py:67) ================================================================================ TEST configureInstallDir from PETSc.options.installDir(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/installDir.py:51) TESTING: configureInstallDir from PETSc.options.installDir(config/PETSc/options/installDir.py:51) Makes installDir subdirectories if it does not exist for both prefix install location and PETSc work install location Changed persistence directory to /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-3.6.3_debug/lib/petsc/conf ================================================================================ TEST restoreReconfigure from PETSc.options.installDir(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/installDir.py:87) TESTING: restoreReconfigure from PETSc.options.installDir(config/PETSc/options/installDir.py:87) ================================================================================ TEST setExternalPackagesDir from PETSc.options.externalpackagesdir(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/externalpackagesdir.py:15) TESTING: setExternalPackagesDir from PETSc.options.externalpackagesdir(config/PETSc/options/externalpackagesdir.py:15) ================================================================================ TEST cleanExternalpackagesDir from PETSc.options.externalpackagesdir(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/externalpackagesdir.py:22) TESTING: cleanExternalpackagesDir from PETSc.options.externalpackagesdir(config/PETSc/options/externalpackagesdir.py:22) ================================================================================ TEST printEnvVariables from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1538) TESTING: printEnvVariables from config.setCompilers(config/BuildSystem/config/setCompilers.py:1538) **** printenv **** Timezone_ntp_server1=10.0.160.15 Timezone_ntp_server2=10.0.160.1 DEPOT_REPOS_ROOT=/depot/repos NII_PARENTIPS=10.231.4.65;10.0.4.95 PJM_O_WORKDIR=/volume2/home/hp150306/t00196/source/petsc-3.6.3 NII_PGID= DEPOT_AUTOINST_ROOT=/depot/repos/instconf InstallerServeNFS=1 CFMBaseDir=/opt/kusu/cfm OMPI_CKPTCONFIG=0x00 PJM_O_SHELL=/bin/bash MANPATH=:/opt/kusu/man Timezone_utc=0 Timezone_zone=Asia/Tokyo KUSU_TMP=/tmp root_password_auth=off PYTHONPATH=/opt/primitive/lib64/python2.6/site-packages:/opt/primitive/lib/python2.6/site-packages:/opt/primitive/lib64/python2.4/site-packages:/opt/primitive/lib/python2.4/site-packages:/opt/kusu/lib64/python:/opt/kusu/lib/python: KUSU_ROOT=/opt/kusu PublicDNSZone=k NII_PEERIP=0 DEPOT_DOCS_ROOT=/depot/www/kits NII_HAGROUP=, InstNum= TUNING_XINET_MAX_CLIENTS=100 PIXIE_ROOT=/tftpboot/kusu Keyboard=jp106 NII_PARENTIP=10.224.0.128 PJM_JOBID=5203527 LS_COLORS=no=00:fi=00:di=00;34:ln=00;36:pi=40;33:so=00;35:bd=40;33;01:cd=40;33;01:or=01;05;37;41:mi=01;05;37;41:ex=00;32:*.cmd=00;32:*.exe=00;32:*.com=00;32:*.btm=00;32:*.bat=00;32:*.sh=00;32:*.csh=00;32:*.tar=00;31:*.tgz=00;31:*.arj=00;31:*.taz=00;31:*.lzh=00;31:*.zip=00;31:*.z=00;31:*.Z=00;31:*.gz=00;31:*.bz2=00;31:*.bz=00;31:*.tz=00;31:*.rpm=00;31:*.cpio=00;31:*.jpg=00;35:*.gif=00;35:*.bmp=00;35:*.xbm=00;35:*.xpm=00;35:*.png=00;35:*.tif=00;35: Env_base=K-1.2.0-20-1 DB_POOLER_MAX_CLIENTS=32768 snmp_trap_receivers= NII_NGTYPE=compute-diskless PJM_DPREFIX=#PJM LMGRD_PATH= PJM_O_PATH=/usr/lib64/qt-3.3/bin:/opt/local/openssh/bin:/opt/FJSVtclang/check:/opt/FJSVtclang/GM-1.2.0-20/bin:/opt/FJSVtclang/1.2.0/util/bin:/usr/local/bin:/bin:/usr/bin:/usr/local/bin/SU/bin:/opt/local/gfarm/bin:/opt/local/Python-2.7.3/bin:/home/hp150306/t00196/bin:/home/hp150306/t00196/shortcut:/home/hp150306/t00196/bin:/home/hp150306/t00196/shortcut SYSLOG_SERVER=disabled passwordless_root_on_compute=on SHLVL=1 NII_NICDEF0=tofu0|10.231.4.97|255.224.0.0|10.224.0.0|-tofu0|10.255.255.254|0||02:00:10:08:02:c3|provision PETSC_ARCH=petsc-3.6.3_debug KUSU_LOGFILE=/var/log/kusu/kusu.log NII_NID=10970 CFM_SERVICE=multicast MODULESHOME=/usr/share/Modules KUSU_MAXLOGNUM=10 NII_INSTALLERS=10.224.0.128 PRIMITIVE_ROOT=/opt/primitive DEPOT_CONTRIB_ROOT=/depot/contrib MULTICAST_ADDR=239.0.0.98 NII_HOSTNAME=o05-037 PrimaryInstaller=cs01p03 MASTER_UUID=KUSU NII_BOOTNIC=tofu0 TMPDIR=./ MODULEPATH=/usr/share/Modules/modulefiles:/etc/modulefiles: NII_NFSROOTSERVER=10.224.0.128 NII_BOOTIP=10.231.4.97 dns1=127.0.0.1 InstallerServeDNS=1 FJPNCKPT_CONFIG=0x00 KUSUSNMPD_LOG_SIZE=5000 KUSU_MAXLOGSIZE=10485760 PROVISION=KUSU InstallerServeDHCP=1 ssh_port=22 TUNING_ENABLED=1 LM_LICENSE_FILE= PJM_JOBNAME=STDIN LD_LIBRARY_PATH=/opt/FJSVpxtof/sparc64fx/lib64:/opt/FJSVtclang/GM-1.2.0-20/lib64:/opt/FJSVpnavi/sparc64fx/lib64:/opt/FJSVXosSclib/lib64 Timezone_ntp_server=10.0.160.14 KUSU_DIST_ARCH=s64fx G_BROKEN_FILENAMES=1 _=./configure DEPOT_REPOS_SCRIPTS=/depot/repos/custom_scripts NII_REPO=/repos/1002 TOFU_HOME=/opt/FJSVpxtof/sparc64fx Language=en_US KusuAuthScheme=files PGBOUNCER_LOG_SIZE=100 KUSU_DHCP_TIMEOUT=120 InstallerServeNTP=1 NII_OSTYPE=xtcos-1.3-sparc64fx PJM_O_HOST=fe01p04 KUSU_DB_ENGINE=postgres NII_REPOID=1002 KUSU_LOGLEVEL=DEBUG NII_INSTALLTYPE=diskless NII_SNMPD=10.224.0.128 NII_NGID=18 KUSU_HEARTBEAT_INTERFACE=bond0 PJM_JOBDIR=/volume2/home/hp150306/t00196/source/petsc-3.6.3 DEPOT_REPOS_POST=/depot/repos/post_scripts DB_POOLER_POOL_SIZE=50000 ssh_old_port=22 NII_DBSERVERPORT=6432 DB_POOLER_PORT=6432 PJM_O_LOGNAME=t00196 PATH=/opt/FJSVtclang/check:/opt/FJSVtclang/GM-1.2.0-20/bin:/opt/kusu/bin:/opt/kusu/sbin:/usr/pgsql-9.0/bin:/usr/local/bin:/bin:/usr/bin:/home/hp150306/t00196/bin:/home/hp150306/t00196/shortcut:/opt/FJSVxosmmm/sbin PJM_ENVIRONMENT=INTERACT NII_DBSERVERIP=10.0.160.20 TERM=xterm KUSU_INSTALLER_GW=10.1.161.254 DNSZone=k PRESERVE_NODE_IP=1 PJM_O_HOME=/home/hp150306/t00196 CFM_PROTOCOL=broadcast NII_NFSROOTOPTS=rw,hard,intr,nolock,async,dev,exec,suid HOME=/home/hp150306/t00196 DEPOT_UPDATES_ROOT=/depot/updates NII_EXTRAID=k-comp_0x03100035 MPI_HOME=/opt/FJSVtclang/GM-1.2.0-20 InstallerServeNIS=0 TUNING_TFTP_MAX_CLIENTS=100 DEPOT_IMAGES_ROOT=/depot/images KUSU_EVENT_LOGFILE=/var/log/kusu/kusu-events.log DB_POOLER_ENABLED=1 TUNING_SSH_MAX_CLIENTS=200 NII_NFSROOTPATH=/export/nfsroot/o05-037 LOADEDMODULES= DEPOT_KITS_ROOT=/depot/kits PJM_O_MAIL=/var/spool/mail/t00196 KUSU_VERSION=2.1 PWD=/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 PJM_O_LANG=en_US.UTF-8 ================================================================================ TEST resetEnvCompilers from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1545) TESTING: resetEnvCompilers from config.setCompilers(config/BuildSystem/config/setCompilers.py:1545) ================================================================================ TEST checkEnvCompilers from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1575) TESTING: checkEnvCompilers from config.setCompilers(config/BuildSystem/config/setCompilers.py:1575) ================================================================================ TEST checkMPICompilerOverride from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1510) TESTING: checkMPICompilerOverride from config.setCompilers(config/BuildSystem/config/setCompilers.py:1510) Check if --with-mpi-dir is used along with CC CXX or FC compiler options. This usually prevents mpi compilers from being used - so issue a warning ================================================================================ TEST requireMpiLdPath from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1529) TESTING: requireMpiLdPath from config.setCompilers(config/BuildSystem/config/setCompilers.py:1529) OpenMPI wrappers require LD_LIBRARY_PATH set ================================================================================ TEST checkVendor from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:402) TESTING: checkVendor from config.setCompilers(config/BuildSystem/config/setCompilers.py:402) Determine the compiler vendor Compiler vendor is "" ================================================================================ TEST checkInitialFlags from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:412) TESTING: checkInitialFlags from config.setCompilers(config/BuildSystem/config/setCompilers.py:412) Initialize the compiler and linker flags Pushing language C Initialized CFLAGS to -Xg -O0 Initialized CFLAGS to -Xg -O0 Initialized LDFLAGS to Popping language C Pushing language CUDA Initialized CUDAFLAGS to Initialized CUDAFLAGS to Initialized LDFLAGS to Popping language CUDA Pushing language Cxx Initialized CXXFLAGS to -Xg -O0 Initialized CXX_CXXFLAGS to Initialized LDFLAGS to Popping language Cxx Pushing language FC Initialized FFLAGS to -X9 -O0 Initialized FFLAGS to -X9 -O0 Initialized LDFLAGS to Popping language FC Initialized CPPFLAGS to Initialized CUDAPPFLAGS to Initialized CXXCPPFLAGS to Initialized CC_LINKER_FLAGS to [] Initialized CXX_LINKER_FLAGS to [] Initialized FC_LINKER_FLAGS to [] Initialized CUDAC_LINKER_FLAGS to [] Initialized sharedLibraryFlags to [] Initialized dynamicLibraryFlags to [] ================================================================================ TEST checkCCompiler from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:538) TESTING: checkCCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:538) Locate a functional C compiler Checking for program /opt/FJSVtclang/check/mpifcc...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/mpifcc...found Defined make macro "CC" to "mpifcc" Pushing language C All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lpetsc-ufod4vtr9mqHvKIQiVAm Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest Popping language C ================================================================================ TEST checkCPreprocessor from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:571) TESTING: checkCPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:571) Locate a functional C preprocessor Checking for program /opt/FJSVtclang/check/mpifcc...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/mpifcc...found Defined make macro "CPP" to "mpifcc -E" Pushing language C Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c" #line 1 "/usr/include/stdlib.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/stdlib.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef int wchar_t; #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 34 "/usr/include/stdlib.h" #line 95 "/usr/include/stdlib.h" typedef struct { int quot; int rem; } div_t; typedef struct { long int quot; long int rem; } ldiv_t; typedef struct { long long int quot; long long int rem; } lldiv_t; extern size_t __ctype_get_mb_cur_max (void) ; extern double atof (const char *__nptr) ; extern int atoi (const char *__nptr) ; extern long int atol (const char *__nptr) ; extern long long int atoll (const char *__nptr) ; extern double strtod (const char * __nptr, char ** __endptr) ; extern float strtof (const char * __nptr, char ** __endptr) ; extern long double strtold (const char * __nptr, char ** __endptr) ; extern long int strtol (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long int strtoul (const char * __nptr, char ** __endptr, int __base) ; extern long long int strtoq (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long long int strtouq (const char * __nptr, char ** __endptr, int __base) ; extern long long int strtoll (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long long int strtoull (const char * __nptr, char ** __endptr, int __base) ; #line 274 "/usr/include/stdlib.h" #line 305 "/usr/include/stdlib.h" extern char *l64a (long int __n) ; extern long int a64l (const char *__s) ; #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; typedef char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 321 "/usr/include/stdlib.h" extern long int random (void) ; extern void srandom (unsigned int __seed) ; extern char *initstate (unsigned int __seed, char *__statebuf, size_t __statelen) ; extern char *setstate (char *__statebuf) ; struct random_data { int32_t *fptr; int32_t *rptr; int32_t *state; int rand_type; int rand_deg; int rand_sep; int32_t *end_ptr; }; extern int random_r (struct random_data * __buf, int32_t * __result) ; extern int srandom_r (unsigned int __seed, struct random_data *__buf) ; extern int initstate_r (unsigned int __seed, char * __statebuf, size_t __statelen, struct random_data * __buf) ; extern int setstate_r (char * __statebuf, struct random_data * __buf) ; extern int rand (void) ; extern void srand (unsigned int __seed) ; extern int rand_r (unsigned int *__seed) ; extern double drand48 (void) ; extern double erand48 (unsigned short int __xsubi[3]) ; extern long int lrand48 (void) ; extern long int nrand48 (unsigned short int __xsubi[3]) ; extern long int mrand48 (void) ; extern long int jrand48 (unsigned short int __xsubi[3]) ; extern void srand48 (long int __seedval) ; extern unsigned short int *seed48 (unsigned short int __seed16v[3]) ; extern void lcong48 (unsigned short int __param[7]) ; struct drand48_data { unsigned short int __x[3]; unsigned short int __old_x[3]; unsigned short int __c; unsigned short int __init; unsigned long long int __a; }; extern int drand48_r (struct drand48_data * __buffer, double * __result) ; extern int erand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, double * __result) ; extern int lrand48_r (struct drand48_data * __buffer, long int * __result) ; extern int nrand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, long int * __result) ; extern int mrand48_r (struct drand48_data * __buffer, long int * __result) ; extern int jrand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, long int * __result) ; extern int srand48_r (long int __seedval, struct drand48_data *__buffer) ; extern int seed48_r (unsigned short int __seed16v[3], struct drand48_data *__buffer) ; extern int lcong48_r (unsigned short int __param[7], struct drand48_data *__buffer) ; extern void *malloc (size_t __size) ; extern void *calloc (size_t __nmemb, size_t __size) ; extern void *realloc (void *__ptr, size_t __size) ; extern void free (void *__ptr) ; extern void cfree (void *__ptr) ; #line 1 "/usr/include/alloca.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/alloca.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 26 "/usr/include/alloca.h" extern void *alloca (size_t __size) ; #line 498 "/usr/include/stdlib.h" extern void *valloc (size_t __size) ; extern int posix_memalign (void **__memptr, size_t __alignment, size_t __size) ; extern void abort (void) ; extern int atexit (void (*__func) (void)) ; extern int on_exit (void (*__func) (int __status, void *__arg), void *__arg) ; extern void exit (int __status) ; extern void _Exit (int __status) ; extern char *getenv (const char *__name) ; extern char *__secure_getenv (const char *__name) ; extern int putenv (char *__string) ; extern int setenv (const char *__name, const char *__value, int __replace) ; extern int unsetenv (const char *__name) ; extern int clearenv (void) ; extern char *mktemp (char *__template) ; extern int mkstemp (char *__template) ; #line 607 "/usr/include/stdlib.h" extern char *mkdtemp (char *__template) ; #line 638 "/usr/include/stdlib.h" extern int system (const char *__command) ; #line 655 "/usr/include/stdlib.h" extern char *realpath (const char * __name, char * __resolved) ; typedef int (*__compar_fn_t) (const void *, const void *); extern void *bsearch (const void *__key, const void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; extern void qsort (void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; extern int abs (int __x) ; extern long int labs (long int __x) ; extern long long int llabs (long long int __x) ; extern div_t div (int __numer, int __denom) ; extern ldiv_t ldiv (long int __numer, long int __denom) ; extern lldiv_t lldiv (long long int __numer, long long int __denom) ; extern char *ecvt (double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *fcvt (double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *gcvt (double __value, int __ndigit, char *__buf) ; extern char *qecvt (long double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *qfcvt (long double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *qgcvt (long double __value, int __ndigit, char *__buf) ; extern int ecvt_r (double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int fcvt_r (double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int qecvt_r (long double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int qfcvt_r (long double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int mblen (const char *__s, size_t __n) ; extern int mbtowc (wchar_t * __pwc, const char * __s, size_t __n) ; extern int wctomb (char *__s, wchar_t __wchar) ; extern size_t mbstowcs (wchar_t * __pwcs, const char * __s, size_t __n) ; extern size_t wcstombs (char * __s, const wchar_t * __pwcs, size_t __n) ; extern int rpmatch (const char *__response) ; #line 820 "/usr/include/stdlib.h" extern int posix_openpt (int __oflag) ; #line 851 "/usr/include/stdlib.h" #line 862 "/usr/include/stdlib.h" extern int getloadavg (double __loadavg[], int __nelem) ; #line 879 "/usr/include/stdlib.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Popping language C ================================================================================ TEST checkCUDACompiler from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:612) TESTING: checkCUDACompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:612) Locate a functional CUDA compiler ================================================================================ TEST checkCUDAPreprocessor from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:652) TESTING: checkCUDAPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:652) Locate a functional CUDA preprocessor ================================================================================ TEST checkCxxCompiler from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:764) TESTING: checkCxxCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:764) Locate a functional Cxx compiler Checking for program /opt/FJSVtclang/check/mpiFCC...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/mpiFCC...found Defined make macro "CXX" to "mpiFCC" Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lpetsc-ufod4vtr9mqHvKIQiVAm Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest Popping language Cxx ================================================================================ TEST checkCxxPreprocessor from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:802) TESTING: checkCxxPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:802) Locate a functional Cxx preprocessor Checking for program /opt/FJSVtclang/check/mpiFCC...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/mpiFCC...found Defined make macro "CXXCPP" to "mpiFCC -E" Pushing language Cxx Executing: mpiFCC -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/FCC.pre" #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conffix.h" extern "C" { } #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/cstdlib" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_prolog.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 33 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 161 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 354 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 59 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_stlport_version.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl_user_config.h" #line 74 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 90 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config_compat.h" #line 28 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config_compat.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config_compat.h" #line 49 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config_compat.h" #line 95 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_site_config.h" #line 30 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_site_config.h" #line 99 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/config/stlcomp.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/config/stl_fujitsu.h" #line 18 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/config/stl_fujitsu.h" #line 28 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/config/stl_fujitsu.h" #line 53 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/config/stlcomp.h" #line 128 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/config/stlcomp.h" #line 102 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/config/stl_confix.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/config/stl_confix.h" #line 111 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 121 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 185 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 196 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 262 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 276 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 297 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 305 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 313 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 321 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 338 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 351 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 372 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 417 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 468 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 496 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 507 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 517 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 542 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 556 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 565 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" namespace std { } namespace __std_alias = std; #line 623 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 643 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 688 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" namespace stlp_priv { using namespace std; } #line 713 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" namespace stlport = std; namespace _STL = std; #line 758 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 784 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 817 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 857 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 871 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 890 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 921 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 936 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 957 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 994 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1022 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1035 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1060 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1091 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1104 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1114 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1148 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1197 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1219 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 1237 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config.h" #line 19 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_prolog.h" #line 25 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/cstdlib" #line 1 "/usr/include/stdlib.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/stdlib.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 25 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 35 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 38 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 52 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 34 "/usr/include/stdlib.h" extern "C" { #line 1 "/usr/include/bits/waitflags.h" #line 43 "/usr/include/stdlib.h" #line 1 "/usr/include/bits/waitstatus.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 66 "/usr/include/bits/waitstatus.h" union wait { int w_status; struct { #line 79 "/usr/include/bits/waitstatus.h" unsigned int:16; unsigned int __w_retcode:8; unsigned int __w_coredump:1; unsigned int __w_termsig:7; } __wait_terminated; struct { #line 93 "/usr/include/bits/waitstatus.h" unsigned int:16; unsigned int __w_stopsig:8; unsigned int __w_stopval:8; } __wait_stopped; }; #line 44 "/usr/include/stdlib.h" #line 57 "/usr/include/stdlib.h" #line 75 "/usr/include/stdlib.h" #line 83 "/usr/include/stdlib.h" #line 95 "/usr/include/stdlib.h" typedef struct { int quot; int rem; } div_t; typedef struct { long int quot; long int rem; } ldiv_t; typedef struct { long long int quot; long long int rem; } lldiv_t; extern size_t __ctype_get_mb_cur_max (void) ; extern double atof (const char *__nptr) ; extern int atoi (const char *__nptr) ; extern long int atol (const char *__nptr) ; extern long long int atoll (const char *__nptr) ; extern double strtod (const char * __nptr, char ** __endptr) ; extern float strtof (const char * __nptr, char ** __endptr) ; extern long double strtold (const char * __nptr, char ** __endptr) ; extern long int strtol (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long int strtoul (const char * __nptr, char ** __endptr, int __base) ; extern long long int strtoq (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long long int strtouq (const char * __nptr, char ** __endptr, int __base) ; extern long long int strtoll (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long long int strtoull (const char * __nptr, char ** __endptr, int __base) ; #line 274 "/usr/include/stdlib.h" #line 305 "/usr/include/stdlib.h" extern char *l64a (long int __n) ; extern long int a64l (const char *__s) ; #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" extern "C" { #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 57 "/usr/include/sys/types.h" typedef __ino64_t ino64_t; typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 95 "/usr/include/sys/types.h" typedef __off64_t off64_t; typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/time.h" #line 22 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/time.h" #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" typedef __clock_t clock_t; typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 30 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/time.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/time.h" #line 134 "/usr/include/sys/types.h" typedef __useconds_t useconds_t; typedef __suseconds_t suseconds_t; #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 25 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 35 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 38 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 52 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; typedef char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/time.h" #line 22 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/time.h" #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 30 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/time.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef long int __fd_mask; typedef struct { __fd_mask fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern "C" { extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); } #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blksize_t blksize_t; typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" typedef __blkcnt64_t blkcnt64_t; typedef __fsblkcnt64_t fsblkcnt64_t; typedef __fsfilcnt64_t fsfilcnt64_t; #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" } #line 321 "/usr/include/stdlib.h" extern long int random (void) ; extern void srandom (unsigned int __seed) ; extern char *initstate (unsigned int __seed, char *__statebuf, size_t __statelen) ; extern char *setstate (char *__statebuf) ; struct random_data { int32_t *fptr; int32_t *rptr; int32_t *state; int rand_type; int rand_deg; int rand_sep; int32_t *end_ptr; }; extern int random_r (struct random_data * __buf, int32_t * __result) ; extern int srandom_r (unsigned int __seed, struct random_data *__buf) ; extern int initstate_r (unsigned int __seed, char * __statebuf, size_t __statelen, struct random_data * __buf) ; extern int setstate_r (char * __statebuf, struct random_data * __buf) ; extern int rand (void) ; extern void srand (unsigned int __seed) ; extern int rand_r (unsigned int *__seed) ; extern double drand48 (void) ; extern double erand48 (unsigned short int __xsubi[3]) ; extern long int lrand48 (void) ; extern long int nrand48 (unsigned short int __xsubi[3]) ; extern long int mrand48 (void) ; extern long int jrand48 (unsigned short int __xsubi[3]) ; extern void srand48 (long int __seedval) ; extern unsigned short int *seed48 (unsigned short int __seed16v[3]) ; extern void lcong48 (unsigned short int __param[7]) ; struct drand48_data { unsigned short int __x[3]; unsigned short int __old_x[3]; unsigned short int __c; unsigned short int __init; unsigned long long int __a; }; extern int drand48_r (struct drand48_data * __buffer, double * __result) ; extern int erand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, double * __result) ; extern int lrand48_r (struct drand48_data * __buffer, long int * __result) ; extern int nrand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, long int * __result) ; extern int mrand48_r (struct drand48_data * __buffer, long int * __result) ; extern int jrand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, long int * __result) ; extern int srand48_r (long int __seedval, struct drand48_data *__buffer) ; extern int seed48_r (unsigned short int __seed16v[3], struct drand48_data *__buffer) ; extern int lcong48_r (unsigned short int __param[7], struct drand48_data *__buffer) ; extern void *malloc (size_t __size) ; extern void *calloc (size_t __nmemb, size_t __size) ; extern void *realloc (void *__ptr, size_t __size) ; extern void free (void *__ptr) ; extern void cfree (void *__ptr) ; #line 1 "/usr/include/alloca.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/alloca.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 25 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 35 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/../stddef.h" #line 38 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 52 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stddef.h" #line 26 "/usr/include/alloca.h" extern "C" { extern void *alloca (size_t __size) ; } #line 498 "/usr/include/stdlib.h" extern void *valloc (size_t __size) ; extern int posix_memalign (void **__memptr, size_t __alignment, size_t __size) ; extern void abort (void) ; extern int atexit (void (*__func) (void)) ; extern int on_exit (void (*__func) (int __status, void *__arg), void *__arg) ; extern void exit (int __status) ; extern void _Exit (int __status) ; extern char *getenv (const char *__name) ; extern char *__secure_getenv (const char *__name) ; extern int putenv (char *__string) ; extern int setenv (const char *__name, const char *__value, int __replace) ; extern int unsetenv (const char *__name) ; extern int clearenv (void) ; extern char *mktemp (char *__template) ; extern int mkstemp (char *__template) ; #line 604 "/usr/include/stdlib.h" extern int mkstemp64 (char *__template) ; extern char *mkdtemp (char *__template) ; #line 638 "/usr/include/stdlib.h" extern int system (const char *__command) ; #line 655 "/usr/include/stdlib.h" extern char *realpath (const char * __name, char * __resolved) ; typedef int (*__compar_fn_t) (const void *, const void *); extern void *bsearch (const void *__key, const void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; extern void qsort (void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; extern int abs (int __x) ; extern long int labs (long int __x) ; extern long long int llabs (long long int __x) ; extern div_t div (int __numer, int __denom) ; extern ldiv_t ldiv (long int __numer, long int __denom) ; extern lldiv_t lldiv (long long int __numer, long long int __denom) ; extern char *ecvt (double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *fcvt (double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *gcvt (double __value, int __ndigit, char *__buf) ; extern char *qecvt (long double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *qfcvt (long double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *qgcvt (long double __value, int __ndigit, char *__buf) ; extern int ecvt_r (double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int fcvt_r (double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int qecvt_r (long double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int qfcvt_r (long double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int mblen (const char *__s, size_t __n) ; extern int mbtowc (wchar_t * __pwc, const char * __s, size_t __n) ; extern int wctomb (char *__s, wchar_t __wchar) ; extern size_t mbstowcs (wchar_t * __pwcs, const char * __s, size_t __n) ; extern size_t wcstombs (char * __s, const wchar_t * __pwcs, size_t __n) ; extern int rpmatch (const char *__response) ; extern int getsubopt (char ** __optionp, char *const * __tokens, char ** __valuep) ; extern void setkey (const char *__key) ; extern int posix_openpt (int __oflag) ; extern int grantpt (int __fd) ; extern int unlockpt (int __fd) ; extern char *ptsname (int __fd) ; #line 862 "/usr/include/stdlib.h" extern int getloadavg (double __loadavg[], int __nelem) ; #line 879 "/usr/include/stdlib.h" } #line 31 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/cstdlib" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/cstdlib" namespace std { using ::div_t; using ::ldiv_t; using ::size_t; using ::abs; using ::div; using ::abort; using ::getenv; using ::mblen; using ::mbtowc; using ::system; using ::bsearch; using ::atexit; using ::exit; using ::calloc; using ::free; using ::malloc; using ::realloc; using ::atof; using ::atoi; using ::atol; using ::mbstowcs; using ::strtod; using ::strtol; using ::strtoul; using ::wcstombs; using ::wctomb; using ::qsort; using ::labs; using ::ldiv; using ::llabs; using ::lldiv_t; using ::lldiv; #line 103 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/cstdlib" using ::rand; using ::srand; } #line 116 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/cstdlib" namespace std { inline long abs(long __x) { return ::labs(__x); } inline ldiv_t div(long __x, long __y) { return ::ldiv(__x, __y); } } #line 166 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/cstdlib" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_epilog.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config_compat_post.h" #line 27 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config_compat_post.h" #line 53 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_config_compat_post.h" #line 20 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_epilog.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/stl/_epilog.h" #line 170 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/c++/std/cstdlib" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Popping language Cxx ================================================================================ TEST checkFortranCompiler from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:919) TESTING: checkFortranCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:919) Locate a functional Fortran compiler Checking for program /opt/FJSVtclang/check/mpifrt...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/mpifrt...found Defined make macro "FC" to "mpifrt" Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.F Successful compile: Source: program main end Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.F Successful compile: Source: program main end Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.F Successful compile: Source: program main end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lpetsc-ufod4vtr9mqHvKIQiVAm Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.F Successful compile: Source: program main end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest Popping language FC ================================================================================ TEST checkFortranComments from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:940) TESTING: checkFortranComments from config.setCompilers(config/BuildSystem/config/setCompilers.py:940) Make sure fortran comment "!" works Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.F Successful compile: Source: ! comment program main end Fortran comments can use ! in column 1 Popping language FC ================================================================================ TEST checkPIC from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1003) TESTING: checkPIC from config.setCompilers(config/BuildSystem/config/setCompilers.py:1003) Determine the PIC option for each compiler - There needs to be a test that checks that the functionality is actually working Skip checking PIC options on user request ================================================================================ TEST checkLargeFileIO from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1036) TESTING: checkLargeFileIO from config.setCompilers(config/BuildSystem/config/setCompilers.py:1036) ================================================================================ TEST checkArchiver from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1135) TESTING: checkArchiver from config.setCompilers(config/BuildSystem/config/setCompilers.py:1135) Check that the archiver exists and can make a library usable by the compiler Pushing language C Executing: ar -V stdout: GNU ar 2.17 Copyright 2005 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License. This program has absolutely no warranty. Executing: ar -V stdout: GNU ar 2.17 Copyright 2005 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License. This program has absolutely no warranty. Defined make macro "FAST_AR_FLAGS" to "Scq" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int foo(int a) { return a+1; } Checking for program /opt/FJSVtclang/check/ar...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/ar...not found Checking for program /opt/kusu/bin/ar...not found Checking for program /opt/kusu/sbin/ar...not found Checking for program /usr/pgsql-9.0/bin/ar...not found Checking for program /usr/local/bin/ar...not found Checking for program /bin/ar...not found Checking for program /usr/bin/ar...found Defined make macro "AR" to "/usr/bin/ar" Checking for program /opt/FJSVtclang/check/ranlib...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/ranlib...not found Checking for program /opt/kusu/bin/ranlib...not found Checking for program /opt/kusu/sbin/ranlib...not found Checking for program /usr/pgsql-9.0/bin/ranlib...not found Checking for program /usr/local/bin/ranlib...not found Checking for program /bin/ranlib...not found Checking for program /usr/bin/ranlib...found Defined make macro "RANLIB" to "/usr/bin/ranlib -c" Executing: /usr/bin/ar cr /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/libconf1.a /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conf1.o Executing: /usr/bin/ranlib -c /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/libconf1.a Possible ERROR while running ranlib: stderr: /usr/bin/ranlib: '-c': No such file Ranlib is not functional with your archiver. Try --with-ranlib=true if ranlib is unnecessary. Executing: ar -V stdout: GNU ar 2.17 Copyright 2005 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License. This program has absolutely no warranty. Executing: ar -V stdout: GNU ar 2.17 Copyright 2005 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License. This program has absolutely no warranty. Defined make macro "FAST_AR_FLAGS" to "Scq" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int foo(int a) { return a+1; } Checking for program /opt/FJSVtclang/check/ar...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/ar...not found Checking for program /opt/kusu/bin/ar...not found Checking for program /opt/kusu/sbin/ar...not found Checking for program /usr/pgsql-9.0/bin/ar...not found Checking for program /usr/local/bin/ar...not found Checking for program /bin/ar...not found Checking for program /usr/bin/ar...found Defined make macro "AR" to "/usr/bin/ar" Checking for program /opt/FJSVtclang/check/ranlib...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/ranlib...not found Checking for program /opt/kusu/bin/ranlib...not found Checking for program /opt/kusu/sbin/ranlib...not found Checking for program /usr/pgsql-9.0/bin/ranlib...not found Checking for program /usr/local/bin/ranlib...not found Checking for program /bin/ranlib...not found Checking for program /usr/bin/ranlib...found Defined make macro "RANLIB" to "/usr/bin/ranlib" Executing: /usr/bin/ar cr /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/libconf1.a /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conf1.o Executing: /usr/bin/ranlib /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/libconf1.a Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" extern int foo(int); int main() { int b = foo(1); if (b); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -L/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -lconf1 Defined make macro "AR_FLAGS" to "cr" Defined make macro "AR_LIB_SUFFIX" to "a" Popping language C ================================================================================ TEST checkSharedLinker from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1246) TESTING: checkSharedLinker from config.setCompilers(config/BuildSystem/config/setCompilers.py:1246) Check that the linker can produce shared libraries Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Checking shared linker /usr/bin/ar using flags [] Checking for program /usr/bin/ar...found Defined make macro "LD_SHARED" to "/usr/bin/ar" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int foo(void) {printf("hello"); return 0;} Pushing language C Popping language C Executing: /usr/bin/ar cr /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/libconftest.a /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o ; /usr/bin/ranlib /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/libconftest.a Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int foo(void); int main() { int ret = foo(); if(ret);; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -L/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -lconftest Using shared linker /usr/bin/ar with flags [] and library extension a Executing: uname -s stdout: Linux ================================================================================ TEST checkSharedLinkerPaths from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1324) TESTING: checkSharedLinkerPaths from config.setCompilers(config/BuildSystem/config/setCompilers.py:1324) Determine the shared linker path options - IRIX: -rpath - Linux, OSF: -Wl,-rpath, - Solaris: -R - FreeBSD: -Wl,-R, Pushing language C Executing: uname -s stdout: Linux Executing: mpifcc -V Trying C linker flag -Wl,-rpath, Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -Wl,-rpath,/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o Valid C linker flag -Wl,-rpath,/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 Popping language C Pushing language Cxx Executing: uname -s stdout: Linux Executing: mpifcc -V Trying Cxx linker flag -Wl,-rpath, Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -Wl,-rpath,/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o Valid Cxx linker flag -Wl,-rpath,/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 Popping language Cxx Pushing language FC Executing: uname -s stdout: Linux Executing: mpifcc -V Trying FC linker flag -Wl,-rpath, Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.F Successful compile: Source: program main end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -Wl,-rpath,/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o Valid FC linker flag -Wl,-rpath,/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 Popping language FC ================================================================================ TEST checkLibC from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1359) TESTING: checkLibC from config.setCompilers(config/BuildSystem/config/setCompilers.py:1359) Test whether we need to explicitly include libc in shared linking - Mac OSX requires an explicit reference to libc for shared linking ================================================================================ TEST checkDynamicLinker from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1408) TESTING: checkDynamicLinker from config.setCompilers(config/BuildSystem/config/setCompilers.py:1408) Check that the linker can dynamicaly load shared libraries Checking for header: dlfcn.h All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/dlfcn.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/dlfcn.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 27 "/usr/include/dlfcn.h" #line 1 "/usr/include/bits/dlfcn.h" #line 30 "/usr/include/dlfcn.h" #line 52 "/usr/include/dlfcn.h" extern void *dlopen (const char *__file, int __mode) ; extern int dlclose (void *__handle) ; extern void *dlsym (void * __handle, const char * __name) ; #line 80 "/usr/include/dlfcn.h" extern char *dlerror (void) ; #line 188 "/usr/include/dlfcn.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_DLFCN_H" to "1" Checking for functions [dlopen dlsym dlclose] in library ['dl'] [] Pushing language C All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dlopen(); static void _check_dlopen() { dlopen(); } char dlsym(); static void _check_dlsym() { dlsym(); } char dlclose(); static void _check_dlclose() { dlclose(); } int main() { _check_dlopen(); _check_dlsym(); _check_dlclose();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ldl Defined "HAVE_LIBDL" to "1" Popping language C Adding ['dl'] to LIBS Executing: uname -s stdout: Linux Checking dynamic linker /usr/bin/ar using flags [] Checking for program /usr/bin/ar...found Defined make macro "DYNAMICLINKER" to "/usr/bin/ar" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int foo(void) {printf("test");return 0;} Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Pushing language C Popping language C Executing: /usr/bin/ar -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/libconftest.so /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ar: no operation specified Checking dynamic linker mpifcc using flags ['-shared'] Checking for program /opt/FJSVtclang/check/mpifcc...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/mpifcc...found Defined make macro "DYNAMICLINKER" to "mpifcc" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -shared -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -ldl Valid C linker flag -shared Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int foo(void) {printf("test");return 0;} Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/libconftest.so -shared -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { void *handle = dlopen("/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/libconftest.so", 0); int (*foo)(void) = (int (*)(void)) dlsym(handle, "foo"); if (!foo) { printf("Could not load symbol\n"); return -1; } if ((*foo)()) { printf("Invalid return from foo()\n"); return -1; } if (dlclose(handle)) { printf("Could not close library\n"); return -1; } ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -ldl Using dynamic linker mpifcc with flags ['-shared'] and library extension so ================================================================================ TEST output from config.setCompilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/setCompilers.py:1454) TESTING: output from config.setCompilers(config/BuildSystem/config/setCompilers.py:1454) Output module data as defines and substitutions Substituting "CC" with "mpifcc" Substituting "CFLAGS" with "-Xg -O0" Defined make macro "CC_LINKER_SLFLAG" to "-Wl,-rpath," Substituting "CPP" with "mpifcc -E" Substituting "CPPFLAGS" with "" Substituting "CXX" with "mpiFCC" Substituting "CXX_CXXFLAGS" with "" Substituting "CXXFLAGS" with "-Xg -O0" Substituting "CXX_LINKER_SLFLAG" with "-Wl,-rpath," Substituting "CXXCPP" with "mpiFCC -E" Substituting "CXXCPPFLAGS" with "" Substituting "FC" with "mpifrt" Substituting "FFLAGS" with "-X9 -O0" Defined make macro "FC_LINKER_SLFLAG" to "-Wl,-rpath," Substituting "LDFLAGS" with "" Substituting "LIBS" with "-ldl " Substituting "SHARED_LIBRARY_FLAG" with "" Executing: uname -s stdout: Linux ================================================================================ TEST checkSharedDynamicPicOptions from PETSc.options.sharedLibraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/sharedLibraries.py:37) TESTING: checkSharedDynamicPicOptions from PETSc.options.sharedLibraries(config/PETSc/options/sharedLibraries.py:37) ================================================================================ TEST configureSharedLibraries from PETSc.options.sharedLibraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/sharedLibraries.py:53) TESTING: configureSharedLibraries from PETSc.options.sharedLibraries(config/PETSc/options/sharedLibraries.py:53) Checks whether shared libraries should be used, for which you must - Specify --with-shared-libraries - Have found a working shared linker Defines PETSC_USE_SHARED_LIBRARIES if they are used Defined make rule "shared_arch" with dependencies "" and code [] Defined make macro "BUILDSHAREDLIB" to "no" Defined "HAVE_SHARED_LIBRARIES" to "1" Shared libraries - disabled ================================================================================ TEST configureDynamicLibraries from PETSc.options.sharedLibraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/sharedLibraries.py:96) TESTING: configureDynamicLibraries from PETSc.options.sharedLibraries(config/PETSc/options/sharedLibraries.py:96) Checks whether dynamic loading is available (with dlfcn.h and libdl) Defined "HAVE_DYNAMIC_LIBRARIES" to "1" ================================================================================ TEST configureSerializedFunctions from PETSc.options.sharedLibraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/sharedLibraries.py:102) TESTING: configureSerializedFunctions from PETSc.options.sharedLibraries(config/PETSc/options/sharedLibraries.py:102) Defines PETSC_SERIALIZE_FUNCTIONS if they are used Requires shared libraries ================================================================================ TEST configureIndexSize from PETSc.options.indexTypes(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/indexTypes.py:31) TESTING: configureIndexSize from PETSc.options.indexTypes(config/PETSc/options/indexTypes.py:31) Defined make macro "PETSC_INDEX_SIZE" to "32" ================================================================================ TEST configureCompilerFlags from config.compilerFlags(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilerFlags.py:71) TESTING: configureCompilerFlags from config.compilerFlags(config/BuildSystem/config/compilerFlags.py:71) Get the default compiler flags Pushing language C Executing: mpifcc --version Ignoring default options which were overridden using --CFLAGS -Xg -O0 Optimization options found in CFLAGS. Skipping setting defaults Popping language C Pushing language Cxx Executing: mpiFCC --version Ignoring default options which were overridden using --CXXFLAGS -Xg -O0 Optimization options found in CXXFLAGS. Skipping setting defaults Popping language Cxx Pushing language FC Executing: mpifrt --version Ignoring default options which were overridden using --FFLAGS -X9 -O0 Optimization options found in FFLAGS. Skipping setting defaults Popping language FC ================================================================================ TEST configureDebugging from PETSc.options.debugging(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/debugging.py:25) TESTING: configureDebugging from PETSc.options.debugging(config/PETSc/options/debugging.py:25) Defined "USE_ERRORCHECKING" to "1" Executing: mpifcc --help ================================================================================ TEST checkRestrict from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:137) TESTING: checkRestrict from config.compilers(config/BuildSystem/config/compilers.py:137) Check for the C/CXX restrict keyword Pushing language C All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.c Possible ERROR while running compiler: exit code 512 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.c", line 5: error: expected a ";" float * restrict x;; ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.c", line 5: warning: variable "restrict" was declared but never referenced float * restrict x;; ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" int main() { float * restrict x;; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.c", line 5: warning: variable "x" was declared but never referenced float * __restrict__ x;; ^ Source: #include "confdefs.h" #include "conffix.h" int main() { float * __restrict__ x;; return 0; } compilers: Set C restrict keyword to __restrict__ Defined "C_RESTRICT" to " __restrict__" Popping language C ================================================================================ TEST checkCFormatting from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:310) TESTING: checkCFormatting from config.compilers(config/BuildSystem/config/compilers.py:310) Activate format string checking if using the GNU compilers ================================================================================ TEST checkCStaticInline from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:108) TESTING: checkCStaticInline from config.compilers(config/BuildSystem/config/compilers.py:108) Check for C keyword: static inline Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" static inline int foo(int a) {return a;} int main() { foo(1);; return 0; } compilers: Set C StaticInline keyword to static inline Popping language C Defined "C_STATIC_INLINE" to "static inline" ================================================================================ TEST checkDynamicLoadFlag from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:321) TESTING: checkDynamicLoadFlag from config.compilers(config/BuildSystem/config/compilers.py:321) Checks that dlopen() takes RTLD_XXX, and defines PETSC_HAVE_RTLD_XXX if it does Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include char *libname; int main() { dlopen(libname, RTLD_LAZY); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -ldl Defined "HAVE_RTLD_LAZY" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include char *libname; int main() { dlopen(libname, RTLD_NOW); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -ldl Defined "HAVE_RTLD_NOW" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include char *libname; int main() { dlopen(libname, RTLD_LOCAL); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -ldl Defined "HAVE_RTLD_LOCAL" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include char *libname; int main() { dlopen(libname, RTLD_GLOBAL); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -ldl Defined "HAVE_RTLD_GLOBAL" to "1" ================================================================================ TEST checkCLibraries from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:164) TESTING: checkCLibraries from config.compilers(config/BuildSystem/config/compilers.py:164) Determines the libraries needed to link with C Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest -### -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -ldl stdout: /usr/bin/ld --eh-frame-hdr -m elf64_sparc -YP,/usr/lib64 -dynamic-linker /lib64/ld-linux.so.2 /usr/lib64/crt1.o /usr/lib64/crti.o /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtbegin.o -YP,/usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4 -u__metInit -ltrtmet -ltrtmet_c -Qy -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lm -lnsl -lutil //opt/FJSVtclang/GM-1.2.0-20/bin/../lib64/fjrtprof.o -T//opt/FJSVtclang/GM-1.2.0-20/bin/../util/lib/data-256mb.lds -L//opt/FJSVtclang/GM-1.2.0-20/bin/../lib64 -u_xfdb_Init -ltrtfdb -lfjrtcl -ltrtth -L/usr/lib64 -lmpg -lmpgpthread -lpapi -lrt -lelf -ldl -lgcc_s -lgcc -lc -lgcc_s -lgcc -lc /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtend.o -L/opt/FJSVxosmmm/lib64 /usr/lib64/crtn.o //opt/FJSVtclang/GM-1.2.0-20/bin/../lib/aopt2 -ir-strip /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest Popping language C compilers: Checking arg /usr/bin/ld compilers: Unknown arg /usr/bin/ld compilers: Checking arg --eh-frame-hdr compilers: Unknown arg --eh-frame-hdr compilers: Checking arg -m compilers: Unknown arg -m compilers: Checking arg elf64_sparc compilers: Unknown arg elf64_sparc compilers: Checking arg -YP,/usr/lib64 compilers: Unknown arg -YP,/usr/lib64 compilers: Checking arg -dynamic-linker compilers: Unknown arg -dynamic-linker compilers: Checking arg /lib64/ld-linux.so.2 compilers: Unknown arg /lib64/ld-linux.so.2 compilers: Checking arg /usr/lib64/crt1.o compilers: Unknown arg /usr/lib64/crt1.o compilers: Checking arg /usr/lib64/crti.o compilers: Unknown arg /usr/lib64/crti.o compilers: Checking arg /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtbegin.o compilers: Unknown arg /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtbegin.o compilers: Checking arg -YP,/usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4 compilers: Unknown arg -YP,/usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4 compilers: Checking arg -u__metInit compilers: Unknown arg -u__metInit compilers: Checking arg -ltrtmet compilers: Found library : -ltrtmet compilers: Checking arg -ltrtmet_c compilers: Found library : -ltrtmet_c compilers: Checking arg -Qy compilers: Unknown arg -Qy compilers: Checking arg -o compilers: Unknown arg -o compilers: Checking arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest compilers: Unknown arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest compilers: Checking arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o compilers: Unknown arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o compilers: Checking arg -ldl compilers: Found library : -ldl compilers: Checking arg -L/opt/FJSVpxtof/sparc64fx/lib64 compilers: Found library directory: -L/opt/FJSVpxtof/sparc64fx/lib64 compilers: Checking arg -L/opt/FJSVtclang/GM-1.2.0-20/lib64 compilers: Found library directory: -L/opt/FJSVtclang/GM-1.2.0-20/lib64 compilers: Checking arg -lmpi compilers: Found library : -lmpi compilers: Checking arg -ltofucom compilers: Found library : -ltofucom compilers: Checking arg -ltofutop compilers: Found library : -ltofutop compilers: Checking arg -lm compilers: Checking arg -lnsl compilers: Found library : -lnsl compilers: Checking arg -lutil compilers: Found library : -lutil compilers: Checking arg //opt/FJSVtclang/GM-1.2.0-20/bin/../lib64/fjrtprof.o compilers: Unknown arg //opt/FJSVtclang/GM-1.2.0-20/bin/../lib64/fjrtprof.o compilers: Checking arg -T//opt/FJSVtclang/GM-1.2.0-20/bin/../util/lib/data-256mb.lds compilers: Unknown arg -T//opt/FJSVtclang/GM-1.2.0-20/bin/../util/lib/data-256mb.lds compilers: Checking arg -L//opt/FJSVtclang/GM-1.2.0-20/bin/../lib64 compilers: Found library directory: -L//opt/FJSVtclang/GM-1.2.0-20/lib64 compilers: Checking arg -u_xfdb_Init compilers: Unknown arg -u_xfdb_Init compilers: Checking arg -ltrtfdb compilers: Found library : -ltrtfdb compilers: Checking arg -lfjrtcl compilers: Found library : -lfjrtcl compilers: Checking arg -ltrtth compilers: Found library : -ltrtth compilers: Checking arg -L/usr/lib64 compilers: Checking arg -lmpg compilers: Found library : -lmpg compilers: Checking arg -lmpgpthread compilers: Found library : -lmpgpthread compilers: Checking arg -lpapi compilers: Found library : -lpapi compilers: Checking arg -lrt compilers: Found library : -lrt compilers: Checking arg -lelf compilers: Found library : -lelf compilers: Checking arg -ldl compilers: Checking arg -lgcc_s compilers: Found library : -lgcc_s compilers: Checking arg -lgcc compilers: Skipping system library: -lgcc compilers: Checking arg -lc compilers: Skipping system library: -lc compilers: Checking arg -lgcc_s compilers: Checking arg -lgcc compilers: Skipping system library: -lgcc compilers: Checking arg -lc compilers: Skipping system library: -lc compilers: Checking arg /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtend.o compilers: Unknown arg /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtend.o compilers: Checking arg -L/opt/FJSVxosmmm/lib64 compilers: Found library directory: -L/opt/FJSVxosmmm/lib64 compilers: Checking arg /usr/lib64/crtn.o compilers: Unknown arg /usr/lib64/crtn.o compilers: Checking arg //opt/FJSVtclang/GM-1.2.0-20/bin/../lib/aopt2 compilers: Unknown arg //opt/FJSVtclang/GM-1.2.0-20/bin/../lib/aopt2 compilers: Checking arg -ir-strip compilers: Unknown arg -ir-strip compilers: Checking arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest compilers: Unknown arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest compilers: Libraries needed to link C code with another linker: ['-ltrtmet', '-ltrtmet_c', '-ldl', '-L/opt/FJSVpxtof/sparc64fx/lib64', '-L/opt/FJSVtclang/GM-1.2.0-20/lib64', '-lmpi', '-ltofucom', '-ltofutop', '-lnsl', '-lutil', '-L//opt/FJSVtclang/GM-1.2.0-20/lib64', '-ltrtfdb', '-lfjrtcl', '-ltrtth', '-lmpg', '-lmpgpthread', '-lpapi', '-lrt', '-lelf', '-lgcc_s', '-L/opt/FJSVxosmmm/lib64'] compilers: Check that C libraries can be used from Fortran Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.F Successful compile: Source: program main end Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.F Successful compile: Source: program main end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.F Successful compile: Source: program main end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lpetsc-ufod4vtr9mqHvKIQiVAm Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.F Successful compile: Source: program main end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest Popping language FC ================================================================================ TEST checkDependencyGenerationFlag from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:1328) TESTING: checkDependencyGenerationFlag from config.compilers(config/BuildSystem/config/compilers.py:1328) Check if -MMD works for dependency generation, and add it if it does Pushing language C Trying C compiler flag -MMD -MP Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 -MMD -MP /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejected C compiler flag -MMD -MP because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.d) was generated Trying C compiler flag -MMD Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 -MMD /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejected C compiler flag -MMD because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.d) was generated Trying C compiler flag -xMMD Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 -xMMD /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejected C compiler flag -xMMD because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.d) was generated Trying C compiler flag -qmakedep=gcc Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 -qmakedep=gcc /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Possible ERROR while running compiler: stderr: fcc: warning: -qmakedep=gcc is unrecognized option. This option is passed to the linker. Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -qmakedep=gcc due to fcc: warning: -qmakedep=gcc is unrecognized option. This option is passed to the linker. Rejected C compiler flag -qmakedep=gcc Trying C compiler flag -MD Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 -MD /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejected C compiler flag -MD because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.d) was generated Popping language C Pushing language Cxx Trying Cxx compiler flag -MMD -MP Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 -MMD -MP /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejected Cxx compiler flag -MMD -MP because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.d) was generated Trying Cxx compiler flag -MMD Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 -MMD /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejected Cxx compiler flag -MMD because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.d) was generated Trying Cxx compiler flag -xMMD Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 -xMMD /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejected Cxx compiler flag -xMMD because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.d) was generated Trying Cxx compiler flag -qmakedep=gcc Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 -qmakedep=gcc /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc Possible ERROR while running compiler: stderr: FCC: warning: -qmakedep=gcc is unrecognized option. This option is passed to the linker. Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting compiler flag -qmakedep=gcc due to FCC: warning: -qmakedep=gcc is unrecognized option. This option is passed to the linker. Rejected Cxx compiler flag -qmakedep=gcc Trying Cxx compiler flag -MD Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -Xg -O0 -MD /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejected Cxx compiler flag -MD because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.d) was generated Popping language Cxx Pushing language FC Trying FC compiler flag -MMD -MP Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -X9 -O0 -MMD -MP /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.F Successful compile: Source: program main end Rejected FC compiler flag -MMD -MP because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.d) was generated Trying FC compiler flag -MMD Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -X9 -O0 -MMD /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.F Successful compile: Source: program main end Rejected FC compiler flag -MMD because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.d) was generated Trying FC compiler flag -xMMD Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -X9 -O0 -xMMD /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.F Successful compile: Source: program main end Rejected FC compiler flag -xMMD because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.d) was generated Trying FC compiler flag -qmakedep=gcc Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -X9 -O0 -qmakedep=gcc /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.F Possible ERROR while running compiler: stderr: frt: warning: -qmakedep=gcc cannot be specified. Source: program main end Rejected FC compiler flag -qmakedep=gcc because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.d) was generated Trying FC compiler flag -MD Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -X9 -O0 -MD /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.F Successful compile: Source: program main end Rejected FC compiler flag -MD because no dependency file (/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.d) was generated Popping language FC ================================================================================ TEST checkC99Flag from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:1372) TESTING: checkC99Flag from config.compilers(config/BuildSystem/config/compilers.py:1372) Check for -std=c99 or equivalent flag Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Possible ERROR while running compiler: exit code 512 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c", line 10: error: expected an expression for (int i=0; i<2; i++){ ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c", line 10: error: identifier "i" is undefined for (int i=0; i<2; i++){ ^ 2 errors detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" int main() { int x[2],y; y = 5; // c++ comment int j = 2; for (int i=0; i<2; i++){ x[i] = i*j*y; } ; return 0; } Rejecting compiler flag due to nonzero status from link Rejecting compiler flag due to "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c", line 10: error: expected an expression for (int i=0; i<2; i++){ ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c", line 10: error: identifier "i" is undefined for (int i=0; i<2; i++){ ^ 2 errors detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c". PETSc Error: No output file produced Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 -std=c99 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c", line 6: warning: variable "x" was set but never used int x[2],y; ^ Source: #include "confdefs.h" #include "conffix.h" int main() { int x[2],y; y = 5; // c++ comment int j = 2; for (int i=0; i<2; i++){ x[i] = i*j*y; } ; return 0; } Accepted C99 compile flag: -std=c99 Popping language C Executing: mpiFCC --help ================================================================================ TEST checkRestrict from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:137) TESTING: checkRestrict from config.compilers(config/BuildSystem/config/compilers.py:137) Check for the C/CXX restrict keyword Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.cc Possible ERROR while running compiler: exit code 512 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.cc", line 5: error: expected a ";" float * restrict x;; ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.cc", line 5: warning: variable "restrict" was declared but never referenced float * restrict x;; ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.cc". Source: #include "confdefs.h" #include "conffix.h" int main() { float * restrict x;; return 0; } Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.cc Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.cc", line 5: warning: variable "x" was declared but never referenced float * __restrict__ x;; ^ Source: #include "confdefs.h" #include "conffix.h" int main() { float * __restrict__ x;; return 0; } compilers: Set Cxx restrict keyword to __restrict__ Defined "CXX_RESTRICT" to " __restrict__" Popping language Cxx ================================================================================ TEST checkCxxNamespace from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:359) TESTING: checkCxxNamespace from config.compilers(config/BuildSystem/config/compilers.py:359) Checks that C++ compiler supports namespaces, and if it does defines HAVE_CXX_NAMESPACE Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" namespace petsc {int dummy;} int main() { ; return 0; } Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" template struct a {}; namespace trouble{ template struct a : public ::a {}; } trouble::a uugh; int main() { ; return 0; } Popping language Cxx compilers: C++ has namespaces Defined "HAVE_CXX_NAMESPACE" to "1" ================================================================================ TEST checkCxxOptionalExtensions from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:334) TESTING: checkCxxOptionalExtensions from config.compilers(config/BuildSystem/config/compilers.py:334) Check whether the C++ compiler (IBM xlC, OSF5) need special flag for .c files which contain C++ Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { class somename { int i; };; return 0; } Added Cxx compiler flag Popping language Cxx ================================================================================ TEST checkCxxStaticInline from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:122) TESTING: checkCxxStaticInline from config.compilers(config/BuildSystem/config/compilers.py:122) Check for C++ keyword: static inline Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" static inline int foo(int a) {return a;} int main() { foo(1);; return 0; } compilers: Set Cxx StaticInline keyword to static inline Popping language Cxx Defined "CXX_STATIC_INLINE" to "static inline" ================================================================================ TEST checkCxxLibraries from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:413) TESTING: checkCxxLibraries from config.compilers(config/BuildSystem/config/compilers.py:413) Determines the libraries needed to link with C++ Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest -### -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl stdout: /usr/bin/ld --eh-frame-hdr -m elf64_sparc -YP,/usr/lib64 -dynamic-linker /lib64/ld-linux.so.2 /usr/lib64/crt1.o /usr/lib64/crti.o /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtbegin.o -YP,/usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4 -u__metInit -ltrtmetcpp -ltrtmet_c -Qy -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi_cxx -lmpi -ltofucom -ltofutop -lm -lnsl -lutil //opt/FJSVtclang/GM-1.2.0-20/bin/../lib64/fjrtprof.o -T//opt/FJSVtclang/GM-1.2.0-20/bin/../util/lib/data-256mb.lds -L//opt/FJSVtclang/GM-1.2.0-20/bin/../lib64 -lfjdemgl -u_xfdb_Init -ltrtfdb -lfjrtcl -ltrtth -L/usr/lib64 -lstd_mt -lmpg -lmpgpthread -lpthread -lpapi -lm -lrt -lelf -ldl -lstdc++ -lgcc_s -lgcc -lc -lgcc_s -lgcc -lc /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtend.o -L/opt/FJSVxosmmm/lib64 /usr/lib64/crtn.o //opt/FJSVtclang/GM-1.2.0-20/bin/../lib/aopt2 -ir-strip /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest Popping language Cxx compilers: Checking arg /usr/bin/ld compilers: Unknown arg /usr/bin/ld compilers: Checking arg --eh-frame-hdr compilers: Unknown arg --eh-frame-hdr compilers: Checking arg -m compilers: Unknown arg -m compilers: Checking arg elf64_sparc compilers: Unknown arg elf64_sparc compilers: Checking arg -YP,/usr/lib64 compilers: Unknown arg -YP,/usr/lib64 compilers: Checking arg -dynamic-linker compilers: Unknown arg -dynamic-linker compilers: Checking arg /lib64/ld-linux.so.2 compilers: Unknown arg /lib64/ld-linux.so.2 compilers: Checking arg /usr/lib64/crt1.o compilers: Unknown arg /usr/lib64/crt1.o compilers: Checking arg /usr/lib64/crti.o compilers: Unknown arg /usr/lib64/crti.o compilers: Checking arg /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtbegin.o compilers: Unknown arg /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtbegin.o compilers: Checking arg -YP,/usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4 compilers: Unknown arg -YP,/usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4 compilers: Checking arg -u__metInit compilers: Unknown arg -u__metInit compilers: Checking arg -ltrtmetcpp compilers: Found library: -ltrtmetcpp compilers: Checking arg -ltrtmet_c compilers: Found library: -ltrtmet_c Library already in C list so skipping in C++ compilers: Checking arg -Qy compilers: Unknown arg -Qy compilers: Checking arg -o compilers: Unknown arg -o compilers: Checking arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest compilers: Unknown arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest compilers: Checking arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o compilers: Unknown arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o compilers: Checking arg -ltrtmet compilers: Found library: -ltrtmet Library already in C list so skipping in C++ compilers: Checking arg -ltrtmet_c compilers: Checking arg -ldl compilers: Found library: -ldl Library already in C list so skipping in C++ compilers: Checking arg -L/opt/FJSVpxtof/sparc64fx/lib64 compilers: Found library directory: -L/opt/FJSVpxtof/sparc64fx/lib64 compilers: Checking arg -L/opt/FJSVtclang/GM-1.2.0-20/lib64 compilers: Found library directory: -L/opt/FJSVtclang/GM-1.2.0-20/lib64 compilers: Checking arg -lmpi compilers: Found library: -lmpi Library already in C list so skipping in C++ compilers: Checking arg -ltofucom compilers: Found library: -ltofucom Library already in C list so skipping in C++ compilers: Checking arg -ltofutop compilers: Found library: -ltofutop Library already in C list so skipping in C++ compilers: Checking arg -lnsl compilers: Found library: -lnsl Library already in C list so skipping in C++ compilers: Checking arg -lutil compilers: Found library: -lutil Library already in C list so skipping in C++ compilers: Checking arg -L//opt/FJSVtclang/GM-1.2.0-20/lib64 compilers: Found library directory: -L//opt/FJSVtclang/GM-1.2.0-20/lib64 compilers: Checking arg -ltrtfdb compilers: Found library: -ltrtfdb Library already in C list so skipping in C++ compilers: Checking arg -lfjrtcl compilers: Found library: -lfjrtcl Library already in C list so skipping in C++ compilers: Checking arg -ltrtth compilers: Found library: -ltrtth Library already in C list so skipping in C++ compilers: Checking arg -lmpg compilers: Found library: -lmpg Library already in C list so skipping in C++ compilers: Checking arg -lmpgpthread compilers: Found library: -lmpgpthread Library already in C list so skipping in C++ compilers: Checking arg -lpapi compilers: Found library: -lpapi Library already in C list so skipping in C++ compilers: Checking arg -lrt compilers: Found library: -lrt Library already in C list so skipping in C++ compilers: Checking arg -lelf compilers: Found library: -lelf Library already in C list so skipping in C++ compilers: Checking arg -lgcc_s compilers: Found library: -lgcc_s Library already in C list so skipping in C++ compilers: Checking arg -L/opt/FJSVxosmmm/lib64 compilers: Found library directory: -L/opt/FJSVxosmmm/lib64 compilers: Checking arg -ldl compilers: Checking arg -L/opt/FJSVpxtof/sparc64fx/lib64 compilers: Checking arg -L/opt/FJSVtclang/GM-1.2.0-20/lib64 compilers: Checking arg -lmpi_cxx compilers: Found library: -lmpi_cxx compilers: Checking arg -lmpi compilers: Checking arg -ltofucom compilers: Checking arg -ltofutop compilers: Checking arg -lm compilers: Checking arg -lnsl compilers: Checking arg -lutil compilers: Checking arg //opt/FJSVtclang/GM-1.2.0-20/bin/../lib64/fjrtprof.o compilers: Unknown arg //opt/FJSVtclang/GM-1.2.0-20/bin/../lib64/fjrtprof.o compilers: Checking arg -T//opt/FJSVtclang/GM-1.2.0-20/bin/../util/lib/data-256mb.lds compilers: Unknown arg -T//opt/FJSVtclang/GM-1.2.0-20/bin/../util/lib/data-256mb.lds compilers: Checking arg -L//opt/FJSVtclang/GM-1.2.0-20/bin/../lib64 compilers: Checking arg -lfjdemgl compilers: Found library: -lfjdemgl compilers: Checking arg -u_xfdb_Init compilers: Unknown arg -u_xfdb_Init compilers: Checking arg -ltrtfdb compilers: Checking arg -lfjrtcl compilers: Checking arg -ltrtth compilers: Checking arg -L/usr/lib64 compilers: Checking arg -lstd_mt compilers: Found library: -lstd_mt compilers: Checking arg -lmpg compilers: Checking arg -lmpgpthread compilers: Checking arg -lpthread compilers: Found library: -lpthread compilers: Checking arg -lpapi compilers: Checking arg -lm compilers: Checking arg -lrt compilers: Checking arg -lelf compilers: Checking arg -ldl compilers: Checking arg -lstdc++ compilers: Found library: -lstdc++ compilers: Checking arg -lgcc_s compilers: Checking arg -lgcc compilers: Skipping system library: -lgcc compilers: Checking arg -lc compilers: Skipping system library: -lc compilers: Checking arg -lgcc_s compilers: Checking arg -lgcc compilers: Skipping system library: -lgcc compilers: Checking arg -lc compilers: Skipping system library: -lc compilers: Checking arg /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtend.o compilers: Unknown arg /usr/lib64/gcc/sparc64-unknown-linux-gnu/4.2.4/crtend.o compilers: Checking arg -L/opt/FJSVxosmmm/lib64 compilers: Checking arg /usr/lib64/crtn.o compilers: Unknown arg /usr/lib64/crtn.o compilers: Checking arg //opt/FJSVtclang/GM-1.2.0-20/bin/../lib/aopt2 compilers: Unknown arg //opt/FJSVtclang/GM-1.2.0-20/bin/../lib/aopt2 compilers: Checking arg -ir-strip compilers: Unknown arg -ir-strip compilers: Checking arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest compilers: Unknown arg /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest compilers: Libraries needed to link Cxx code with another linker: ['-ltrtmetcpp', '-L/opt/FJSVpxtof/sparc64fx/lib64', '-L/opt/FJSVtclang/GM-1.2.0-20/lib64', '-L//opt/FJSVtclang/GM-1.2.0-20/lib64', '-L/opt/FJSVxosmmm/lib64', '-lmpi_cxx', '-lfjdemgl', '-lstd_mt', '-lpthread', '-lstdc++'] compilers: Check that Cxx libraries can be used from C Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lpetsc-ufod4vtr9mqHvKIQiVAm Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest Popping language C compilers: Check that Cxx libraries can be used from Fortran Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.F Successful compile: Source: program main end Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.F Successful compile: Source: program main end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.F Successful compile: Source: program main end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lpetsc-ufod4vtr9mqHvKIQiVAm Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.F Successful compile: Source: program main end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest Popping language FC ================================================================================ TEST checkCxx11 from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:374) TESTING: checkCxx11 from config.compilers(config/BuildSystem/config/compilers.py:374) Determine the option needed to support the C++11 dialect We auto-detect C++11 if the compiler supports it without options, otherwise we require with-cxx-dialect=C++11 to try adding flags to support it. Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc", line 4: catastrophic error: cannot open source file "random" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" #include template constexpr T Cubed( T x ) { return x*x*x; } int main() { std::random_device rd; std::mt19937 mt(rd()); std::normal_distribution dist(0,1); const double x = dist(mt); ; return 0; } Rejecting compiler flag due to nonzero status from link Rejecting compiler flag due to "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc", line 4: catastrophic error: cannot open source file "random" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc". Compilation terminated. PETSc Error: No output file produced Popping language Cxx ================================================================================ TEST checkFortranTypeSizes from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:572) TESTING: checkFortranTypeSizes from config.compilers(config/BuildSystem/config/compilers.py:572) Check whether real*8 is supported and suggest flags which will allow support Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.F Possible ERROR while running compiler: stderr: Fortran diagnostic messages: program name(main) jwd2006i-i "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.F", line 2: 'variable' is declared but never referenced. Source: program main real*8 variable end Popping language FC ================================================================================ TEST checkFortranNameMangling from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:631) TESTING: checkFortranNameMangling from config.compilers(config/BuildSystem/config/compilers.py:631) Checks Fortran name mangling, and defines HAVE_FORTRAN_UNDERSCORE, HAVE_FORTRAN_NOUNDERSCORE, HAVE_FORTRAN_CAPS, or HAVE_FORTRAN_STDCALL Testing Fortran mangling type underscore with code void d1chk_(void){return;} Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" void d1chk_(void){return;} Popping language C Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.F Successful compile: Source: program main call d1chk() end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/confc.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language FC compilers: Fortran name mangling is underscore Defined "HAVE_FORTRAN_UNDERSCORE" to "1" ================================================================================ TEST checkFortranNameManglingDouble from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:668) TESTING: checkFortranNameManglingDouble from config.compilers(config/BuildSystem/config/compilers.py:668) Checks if symbols containing an underscore append an extra underscore, and defines HAVE_FORTRAN_UNDERSCORE_UNDERSCORE if necessary Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" void d1_chk__(void){return;} Popping language C Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.F Successful compile: Source: program main call d1_chk() end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/confc.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o: In function `MAIN__': conftest.F:(.text+0x30): undefined reference to `d1_chk_' /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o:(.data+0x0): undefined reference to `d1_chk_' Popping language FC ================================================================================ TEST checkFortranPreprocessor from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:678) TESTING: checkFortranPreprocessor from config.compilers(config/BuildSystem/config/compilers.py:678) Determine if Fortran handles preprocessing properly Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.F Successful compile: Source: program main #define dummy dummy #ifndef dummy fooey #endif end Added FC compiler flag Popping language FC compilers: Fortran uses CPP preprocessor ================================================================================ TEST checkFortranDefineCompilerOption from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:699) TESTING: checkFortranDefineCompilerOption from config.compilers(config/BuildSystem/config/compilers.py:699) Check if -WF,-Dfoobar or -Dfoobar is the compiler option to define a macro Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -X9 -O0 -DTesting /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.F Successful compile: Source: program main #define dummy dummy #ifndef Testing fooey #endif end Defined make macro "FC_DEFINE_FLAG" to "-D" Popping language FC compilers: Fortran uses -D for defining macro ================================================================================ TEST checkFortranLibraries from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:716) TESTING: checkFortranLibraries from config.compilers(config/BuildSystem/config/compilers.py:716) Substitutes for FLIBS the libraries needed to link with Fortran This macro is intended to be used in those situations when it is necessary to mix, e.g. C++ and Fortran 77, source code into a single program or shared library. For example, if object files from a C++ and Fortran 77 compiler must be linked together, then the C++ compiler/linker must be used for linking (since special C++-ish things need to happen at link time like calling global constructors, instantiating templates, enabling exception support, etc.). However, the Fortran 77 intrinsic and run-time libraries must be linked in as well, but the C++ compiler/linker does not know how to add these Fortran 77 libraries. This code was translated from the autoconf macro which was packaged in its current form by Matthew D. Langston . However, nearly all of this macro came from the OCTAVE_FLIBS macro in octave-2.0.13/aclocal.m4, and full credit should go to John W. Eaton for writing this extremely useful macro. Pushing language FC Executing: mpifrt -V Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.F Successful compile: Source: program main end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest -v -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language FC compilers: Libraries needed to link Fortran code with the C linker: [] compilers: Libraries needed to link Fortran main with the C linker: [] compilers: Check that Fortran libraries can be used from C Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lpetsc-ufod4vtr9mqHvKIQiVAm Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest Popping language C compilers: Check that Fortran libraries can be used from C++ Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl -lpetsc-ufod4vtr9mqHvKIQiVAm Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lpetsc-ufod4vtr9mqHvKIQiVAm Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest Popping language Cxx compilers: Fortran libraries can be used from C++ ================================================================================ TEST checkFortranLinkingCxx from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:1062) TESTING: checkFortranLinkingCxx from config.compilers(config/BuildSystem/config/compilers.py:1062) Check that Fortran can be linked against C++ Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" extern "C" void d1chk_(void); void foo(void){d1chk_();} Popping language Cxx Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" extern "C" void d1chk_(void); void d1chk_(void){return;} Popping language Cxx Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.F Successful compile: Source: program main call d1chk() end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/cxxobj.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/confc.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/cxxobj.o:(.eh_frame+0x12): undefined reference to `__gxx_personality_v0' Popping language FC Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" extern "C" void d1chk_(void); void d1chk_(void){return;} Popping language Cxx Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.F Successful compile: Source: program main call d1chk() end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/cxxobj.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/confc.o -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language FC compilers: Fortran can link C++ functions using the C++ compiler libraries ================================================================================ TEST checkFortran90 from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:1097) TESTING: checkFortran90 from config.compilers(config/BuildSystem/config/compilers.py:1097) Determine whether the Fortran compiler handles F90 Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.F Successful compile: Source: program main INTEGER, PARAMETER :: int = SELECTED_INT_KIND(8) INTEGER (KIND=int) :: ierr ierr = 1 end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "USING_F90" to "1" Fortran compiler supports F90 Popping language FC ================================================================================ TEST checkFortran2003 from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:1110) TESTING: checkFortran2003 from config.compilers(config/BuildSystem/config/compilers.py:1110) Determine whether the Fortran compiler handles F2003 Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.F Successful compile: Source: program main use,intrinsic :: iso_c_binding Type(C_Ptr),Dimension(:),Pointer :: CArray character(kind=c_char),pointer :: nullc => null() character(kind=c_char,len=5),dimension(:),pointer::list1 allocate(list1(5)) CArray = (/(c_loc(list1(i)),i=1,5),c_loc(nullc)/) end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "USING_F2003" to "1" Fortran compiler supports F2003 Popping language FC ================================================================================ TEST checkFortran90Array from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:1130) TESTING: checkFortran90Array from config.compilers(config/BuildSystem/config/compilers.py:1130) Check for F90 array interfaces Executing: uname -s stdout: Linux Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include void f90arraytest_(void* a1, void* a2,void* a3, void* i) { printf("arrays [%p %p %p]\n",a1,a2,a3); fflush(stdout); return; } void f90ptrtest_(void* a1, void* a2,void* a3, void* i, void* p1 ,void* p2, void* p3) { printf("arrays [%p %p %p]\n",a1,a2,a3); if ((p1 == p3) && (p1 != p2)) { printf("pointers match! [%p %p] [%p]\n",p1,p3,p2); fflush(stdout); } else { printf("pointers do not match! [%p %p] [%p]\n",p1,p3,p2); fflush(stdout); exit(111); } return; } Popping language C Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.F Successful compile: Source: program main Interface Subroutine f90ptrtest(p1,p2,p3,i) integer, pointer :: p1(:,:) integer, pointer :: p2(:,:) integer, pointer :: p3(:,:) integer i End Subroutine End Interface integer, pointer :: ptr1(:,:),ptr2(:,:) integer, target :: array(6:8,9:21) integer in in = 25 ptr1 => array ptr2 => array call f90arraytest(ptr1,ptr2,ptr1,in) call f90ptrtest(ptr1,ptr2,ptr1,in) end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/fooobj.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest stdout: arrays [0x20000ac0 0x20000ac0 0x20000ac0] arrays [0x20000a60 0x20000a00 0x20000a60] pointers match! [0x20000a60 0x20000a60] [0x20000a00] Popping language FC Defined "HAVE_F90_2PTR_ARG" to "1" compilers: F90 compiler uses two arguments for array pointers ================================================================================ TEST checkFortranModuleInclude from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:1217) TESTING: checkFortranModuleInclude from config.compilers(config/BuildSystem/config/compilers.py:1217) Figures out what flag is used to specify the include path for Fortran modules Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.F Successful compile: Source: module configtest integer testint parameter (testint = 42) end module configtest Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/confdir -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.F Successful compile: Source: program main use configtest write(*,*) testint end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/confdir -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/configtest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl compilers: Fortran module include flag -I found Popping language FC ================================================================================ TEST checkFortranModuleOutput from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:1283) TESTING: checkFortranModuleOutput from config.compilers(config/BuildSystem/config/compilers.py:1283) Figures out what flag is used to specify the include path for Fortran modules Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -module /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/confdir -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.F Successful compile: Source: module configtest integer testint parameter (testint = 42) end module configtest compilers: Fortran module output flag -module failed Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -module:/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/confdir -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.F Successful compile: Source: module configtest integer testint parameter (testint = 42) end module configtest compilers: Fortran module output flag -module: failed Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -fmod=/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/confdir -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.F Possible ERROR while running compiler: stderr: frt: warning: Invalid suboption mod=/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/confdir specified for -f. Source: module configtest integer testint parameter (testint = 42) end module configtest compilers: Fortran module output flag -fmod= failed Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -J/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/confdir -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.F Possible ERROR while running compiler: stderr: frt: warning: -J/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/confdir is unrecognized option. This option is passed to the linker. Source: module configtest integer testint parameter (testint = 42) end module configtest compilers: Fortran module output flag -J failed Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -M/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/confdir -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers/conftest.F Successful compile: Source: module configtest integer testint parameter (testint = 42) end module configtest compilers: Fortran module output flag -M found Popping language FC ================================================================================ TEST setupFrameworkCompilers from config.compilers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/compilers.py:1437) TESTING: setupFrameworkCompilers from config.compilers(config/BuildSystem/config/compilers.py:1437) ================================================================================ TEST configureClosure from config.utilities.closure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/closure.py:18) TESTING: configureClosure from config.utilities.closure(config/BuildSystem/config/utilities/closure.py:18) Determine if Apple ^close syntax is supported in C Pushing language C All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure/conftest.c Possible ERROR while running compiler: exit code 512 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure/conftest.c", line 6: error: expected an identifier int (^closure)(int);; ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include int main() { int (^closure)(int);; return 0; } Compile failed inside link ================================================================================ TEST configureFortranCPP from PETSc.options.fortranCPP(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/fortranCPP.py:27) TESTING: configureFortranCPP from PETSc.options.fortranCPP(config/PETSc/options/fortranCPP.py:27) Handle case where Fortran cannot preprocess properly Defined make rule ".f.o .f90.o .f95.o" with dependencies "" and code ['${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FC_FLAGS} ${FFLAGS} -o $@ $<'] Defined make rule ".f.a" with dependencies "" and code ['${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FC_FLAGS} ${FFLAGS} $<', '-${AR} ${AR_FLAGS} ${LIBNAME} $*.o', '-${RM} $*.o'] Defined make rule ".F.o .F90.o .F95.o" with dependencies "" and code ['${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FC_FLAGS} ${FFLAGS} ${FCPPFLAGS} -o $@ $<'] Defined make rule ".F.a" with dependencies "" and code ['${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FC_FLAGS} ${FFLAGS} ${FCPPFLAGS} $<', '-${AR} ${AR_FLAGS} ${LIBNAME} $*.o', '-${RM} $*.o'] Defined "USE_FORTRAN_INTERFACES" to "1" ================================================================================ TEST checkStdC from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:105) TESTING: checkStdC from config.headers(config/BuildSystem/config/headers.py:105) Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include int main() { ; return 0; } Source: #include "confdefs.h" #include "conffix.h" #include Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/string.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/string.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 34 "/usr/include/string.h" extern void *memcpy (void * __dest, const void * __src, size_t __n) ; extern void *memmove (void *__dest, const void *__src, size_t __n) ; extern void *memccpy (void * __dest, const void * __src, int __c, size_t __n) ; extern void *memset (void *__s, int __c, size_t __n) ; extern int memcmp (const void *__s1, const void *__s2, size_t __n) ; extern void *memchr (const void *__s, int __c, size_t __n) ; #line 80 "/usr/include/string.h" extern char *strcpy (char * __dest, const char * __src) ; extern char *strncpy (char * __dest, const char * __src, size_t __n) ; extern char *strcat (char * __dest, const char * __src) ; extern char *strncat (char * __dest, const char * __src, size_t __n) ; extern int strcmp (const char *__s1, const char *__s2) ; extern int strncmp (const char *__s1, const char *__s2, size_t __n) ; extern int strcoll (const char *__s1, const char *__s2) ; extern size_t strxfrm (char * __dest, const char * __src, size_t __n) ; #line 127 "/usr/include/string.h" extern char *strdup (const char *__s) ; #line 164 "/usr/include/string.h" extern char *strchr (const char *__s, int __c) ; extern char *strrchr (const char *__s, int __c) ; #line 180 "/usr/include/string.h" extern size_t strcspn (const char *__s, const char *__reject) ; extern size_t strspn (const char *__s, const char *__accept) ; extern char *strpbrk (const char *__s, const char *__accept) ; extern char *strstr (const char *__haystack, const char *__needle) ; extern char *strtok (char * __s, const char * __delim) ; extern char *__strtok_r (char * __s, const char * __delim, char ** __save_ptr) ; extern char *strtok_r (char * __s, const char * __delim, char ** __save_ptr) ; #line 238 "/usr/include/string.h" extern size_t strlen (const char *__s) ; #line 252 "/usr/include/string.h" extern char *strerror (int __errnum) ; extern int __xpg_strerror_r (int __errnum, char *__buf, size_t __buflen) ; #line 285 "/usr/include/string.h" extern void __bzero (void *__s, size_t __n) ; extern void bcopy (const void *__src, void *__dest, size_t __n) ; extern void bzero (void *__s, size_t __n) ; extern int bcmp (const void *__s1, const void *__s2, size_t __n) ; extern char *index (const char *__s, int __c) ; extern char *rindex (const char *__s, int __c) ; extern int ffs (int __i) ; #line 329 "/usr/include/string.h" extern int strcasecmp (const char *__s1, const char *__s2) ; extern int strncasecmp (const char *__s1, const char *__s2, size_t __n) ; #line 350 "/usr/include/string.h" extern char *strsep (char ** __stringp, const char * __delim) ; #line 396 "/usr/include/string.h" #line 431 "/usr/include/string.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Source: #include "confdefs.h" #include "conffix.h" #include Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/stdlib.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/stdlib.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef int wchar_t; #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 34 "/usr/include/stdlib.h" #line 95 "/usr/include/stdlib.h" typedef struct { int quot; int rem; } div_t; typedef struct { long int quot; long int rem; } ldiv_t; typedef struct { long long int quot; long long int rem; } lldiv_t; extern size_t __ctype_get_mb_cur_max (void) ; extern double atof (const char *__nptr) ; extern int atoi (const char *__nptr) ; extern long int atol (const char *__nptr) ; extern long long int atoll (const char *__nptr) ; extern double strtod (const char * __nptr, char ** __endptr) ; extern float strtof (const char * __nptr, char ** __endptr) ; extern long double strtold (const char * __nptr, char ** __endptr) ; extern long int strtol (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long int strtoul (const char * __nptr, char ** __endptr, int __base) ; extern long long int strtoq (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long long int strtouq (const char * __nptr, char ** __endptr, int __base) ; extern long long int strtoll (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long long int strtoull (const char * __nptr, char ** __endptr, int __base) ; #line 274 "/usr/include/stdlib.h" #line 305 "/usr/include/stdlib.h" extern char *l64a (long int __n) ; extern long int a64l (const char *__s) ; #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; typedef char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 321 "/usr/include/stdlib.h" extern long int random (void) ; extern void srandom (unsigned int __seed) ; extern char *initstate (unsigned int __seed, char *__statebuf, size_t __statelen) ; extern char *setstate (char *__statebuf) ; struct random_data { int32_t *fptr; int32_t *rptr; int32_t *state; int rand_type; int rand_deg; int rand_sep; int32_t *end_ptr; }; extern int random_r (struct random_data * __buf, int32_t * __result) ; extern int srandom_r (unsigned int __seed, struct random_data *__buf) ; extern int initstate_r (unsigned int __seed, char * __statebuf, size_t __statelen, struct random_data * __buf) ; extern int setstate_r (char * __statebuf, struct random_data * __buf) ; extern int rand (void) ; extern void srand (unsigned int __seed) ; extern int rand_r (unsigned int *__seed) ; extern double drand48 (void) ; extern double erand48 (unsigned short int __xsubi[3]) ; extern long int lrand48 (void) ; extern long int nrand48 (unsigned short int __xsubi[3]) ; extern long int mrand48 (void) ; extern long int jrand48 (unsigned short int __xsubi[3]) ; extern void srand48 (long int __seedval) ; extern unsigned short int *seed48 (unsigned short int __seed16v[3]) ; extern void lcong48 (unsigned short int __param[7]) ; struct drand48_data { unsigned short int __x[3]; unsigned short int __old_x[3]; unsigned short int __c; unsigned short int __init; unsigned long long int __a; }; extern int drand48_r (struct drand48_data * __buffer, double * __result) ; extern int erand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, double * __result) ; extern int lrand48_r (struct drand48_data * __buffer, long int * __result) ; extern int nrand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, long int * __result) ; extern int mrand48_r (struct drand48_data * __buffer, long int * __result) ; extern int jrand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, long int * __result) ; extern int srand48_r (long int __seedval, struct drand48_data *__buffer) ; extern int seed48_r (unsigned short int __seed16v[3], struct drand48_data *__buffer) ; extern int lcong48_r (unsigned short int __param[7], struct drand48_data *__buffer) ; extern void *malloc (size_t __size) ; extern void *calloc (size_t __nmemb, size_t __size) ; extern void *realloc (void *__ptr, size_t __size) ; extern void free (void *__ptr) ; extern void cfree (void *__ptr) ; #line 1 "/usr/include/alloca.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/alloca.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 26 "/usr/include/alloca.h" extern void *alloca (size_t __size) ; #line 498 "/usr/include/stdlib.h" extern void *valloc (size_t __size) ; extern int posix_memalign (void **__memptr, size_t __alignment, size_t __size) ; extern void abort (void) ; extern int atexit (void (*__func) (void)) ; extern int on_exit (void (*__func) (int __status, void *__arg), void *__arg) ; extern void exit (int __status) ; extern void _Exit (int __status) ; extern char *getenv (const char *__name) ; extern char *__secure_getenv (const char *__name) ; extern int putenv (char *__string) ; extern int setenv (const char *__name, const char *__value, int __replace) ; extern int unsetenv (const char *__name) ; extern int clearenv (void) ; extern char *mktemp (char *__template) ; extern int mkstemp (char *__template) ; #line 607 "/usr/include/stdlib.h" extern char *mkdtemp (char *__template) ; #line 638 "/usr/include/stdlib.h" extern int system (const char *__command) ; #line 655 "/usr/include/stdlib.h" extern char *realpath (const char * __name, char * __resolved) ; typedef int (*__compar_fn_t) (const void *, const void *); extern void *bsearch (const void *__key, const void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; extern void qsort (void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; extern int abs (int __x) ; extern long int labs (long int __x) ; extern long long int llabs (long long int __x) ; extern div_t div (int __numer, int __denom) ; extern ldiv_t ldiv (long int __numer, long int __denom) ; extern lldiv_t lldiv (long long int __numer, long long int __denom) ; extern char *ecvt (double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *fcvt (double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *gcvt (double __value, int __ndigit, char *__buf) ; extern char *qecvt (long double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *qfcvt (long double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *qgcvt (long double __value, int __ndigit, char *__buf) ; extern int ecvt_r (double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int fcvt_r (double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int qecvt_r (long double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int qfcvt_r (long double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int mblen (const char *__s, size_t __n) ; extern int mbtowc (wchar_t * __pwc, const char * __s, size_t __n) ; extern int wctomb (char *__s, wchar_t __wchar) ; extern size_t mbstowcs (wchar_t * __pwcs, const char * __s, size_t __n) ; extern size_t wcstombs (char * __s, const wchar_t * __pwcs, size_t __n) ; extern int rpmatch (const char *__response) ; #line 820 "/usr/include/stdlib.h" extern int posix_openpt (int __oflag) ; #line 851 "/usr/include/stdlib.h" #line 862 "/usr/include/stdlib.h" extern int getloadavg (double __loadavg[], int __nelem) ; #line 879 "/usr/include/stdlib.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #define ISLOWER(c) ('a' <= (c) && (c) <= 'z') #define TOUPPER(c) (ISLOWER(c) ? 'A' + ((c) - 'a') : (c)) #define XOR(e, f) (((e) && !(f)) || (!(e) && (f))) int main() { int i; for(i = 0; i < 256; i++) if (XOR(islower(i), ISLOWER(i)) || toupper(i) != TOUPPER(i)) exit(2); exit(0); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest Defined "STDC_HEADERS" to "1" ================================================================================ TEST checkStat from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:138) TESTING: checkStat from config.headers(config/BuildSystem/config/headers.py:138) Checks whether stat file-mode macros are broken, and defines STAT_MACROS_BROKEN if they are Source: #include "confdefs.h" #include "conffix.h" #include #include #if defined(S_ISBLK) && defined(S_IFDIR) # if S_ISBLK (S_IFDIR) You lose. # endif #endif #if defined(S_ISBLK) && defined(S_IFCHR) # if S_ISBLK (S_IFCHR) You lose. # endif #endif #if defined(S_ISLNK) && defined(S_IFREG) # if S_ISLNK (S_IFREG) You lose. # endif #endif #if defined(S_ISSOCK) && defined(S_IFREG) # if S_ISSOCK (S_IFREG) You lose. # endif #endif Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; typedef char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 5 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/sys/stat.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/stat.h" #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 40 "/usr/include/sys/stat.h" #line 63 "/usr/include/sys/stat.h" #line 82 "/usr/include/sys/stat.h" #line 104 "/usr/include/sys/stat.h" #line 1 "/usr/include/bits/stat.h" struct stat { __dev_t st_dev; unsigned short int __pad1; __ino_t st_ino; __mode_t st_mode; __nlink_t st_nlink; __uid_t st_uid; __gid_t st_gid; __dev_t st_rdev; unsigned short int __pad2; __off_t st_size; __blksize_t st_blksize; __blkcnt_t st_blocks; struct timespec st_atim; struct timespec st_mtim; struct timespec st_ctim; #line 85 "/usr/include/bits/stat.h" unsigned long int __unused4; unsigned long int __unused5; }; #line 132 "/usr/include/bits/stat.h" #line 151 "/usr/include/bits/stat.h" #line 166 "/usr/include/bits/stat.h" #line 108 "/usr/include/sys/stat.h" #line 126 "/usr/include/sys/stat.h" #line 141 "/usr/include/sys/stat.h" extern int stat (const char * __file, struct stat * __buf) ; extern int fstat (int __fd, struct stat *__buf) ; #line 232 "/usr/include/sys/stat.h" #line 256 "/usr/include/sys/stat.h" extern int lstat (const char * __file, struct stat * __buf) ; #line 279 "/usr/include/sys/stat.h" extern int chmod (const char *__file, __mode_t __mode) ; extern int lchmod (const char *__file, __mode_t __mode) ; extern int fchmod (int __fd, __mode_t __mode) ; #line 304 "/usr/include/sys/stat.h" extern __mode_t umask (__mode_t __mask) ; extern int mkdir (const char *__path, __mode_t __mode) ; #line 328 "/usr/include/sys/stat.h" extern int mknod (const char *__path, __mode_t __mode, __dev_t __dev) ; #line 344 "/usr/include/sys/stat.h" extern int mkfifo (const char *__path, __mode_t __mode) ; #line 357 "/usr/include/sys/stat.h" #line 366 "/usr/include/sys/stat.h" #line 394 "/usr/include/sys/stat.h" extern int __fxstat (int __ver, int __fildes, struct stat *__stat_buf) ; extern int __xstat (int __ver, const char *__filename, struct stat *__stat_buf) ; extern int __lxstat (int __ver, const char *__filename, struct stat *__stat_buf) ; extern int __fxstatat (int __ver, int __fildes, const char *__filename, struct stat *__stat_buf, int __flag) ; #line 428 "/usr/include/sys/stat.h" #line 440 "/usr/include/sys/stat.h" extern int __xmknod (int __ver, const char *__path, __mode_t __mode, __dev_t *__dev) ; extern int __xmknodat (int __ver, int __fd, const char *__path, __mode_t __mode, __dev_t *__dev) ; #line 531 "/usr/include/sys/stat.h" #line 6 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" ================================================================================ TEST checkSysWait from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:173) TESTING: checkSysWait from config.headers(config/BuildSystem/config/headers.py:173) Check for POSIX.1 compatible sys/wait.h, and defines HAVE_SYS_WAIT_H if found Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #ifndef WEXITSTATUS #define WEXITSTATUS(stat_val) ((unsigned)(stat_val) >> 8) #endif #ifndef WIFEXITED #define WIFEXITED(stat_val) (((stat_val) & 255) == 0) #endif int main() { int s; wait (&s); s = WIFEXITED (s) ? WEXITSTATUS (s) : 1; ; return 0; } Defined "HAVE_SYS_WAIT_H" to "1" ================================================================================ TEST checkTime from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:195) TESTING: checkTime from config.headers(config/BuildSystem/config/headers.py:195) Checks if you can safely include both and , and if so defines TIME_WITH_SYS_TIME Checking for header: time.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 30 "/usr/include/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 40 "/usr/include/time.h" #line 1 "/usr/include/bits/time.h" #line 43 "/usr/include/bits/time.h" #line 44 "/usr/include/time.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 58 "/usr/include/time.h" typedef __clock_t clock_t; typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; struct timespec { __time_t tv_sec; long int tv_nsec; }; struct tm { int tm_sec; int tm_min; int tm_hour; int tm_mday; int tm_mon; int tm_year; int tm_wday; int tm_yday; int tm_isdst; long int tm_gmtoff; const char *tm_zone; }; struct itimerspec { struct timespec it_interval; struct timespec it_value; }; struct sigevent; typedef __pid_t pid_t; extern clock_t clock (void) ; extern time_t time (time_t *__timer) ; extern double difftime (time_t __time1, time_t __time0) ; extern time_t mktime (struct tm *__tp) ; extern size_t strftime (char * __s, size_t __maxsize, const char * __format, const struct tm * __tp) ; #line 212 "/usr/include/time.h" #line 227 "/usr/include/time.h" extern struct tm *gmtime (const time_t *__timer) ; extern struct tm *localtime (const time_t *__timer) ; extern struct tm *gmtime_r (const time_t * __timer, struct tm * __tp) ; extern struct tm *localtime_r (const time_t * __timer, struct tm * __tp) ; extern char *asctime (const struct tm *__tp) ; extern char *ctime (const time_t *__timer) ; extern char *asctime_r (const struct tm * __tp, char * __buf) ; extern char *ctime_r (const time_t * __timer, char * __buf) ; extern char *__tzname[2]; extern int __daylight; extern long int __timezone; extern char *tzname[2]; extern void tzset (void) ; extern int daylight; extern long int timezone; extern int stime (const time_t *__when) ; extern time_t timegm (struct tm *__tp) ; extern time_t timelocal (struct tm *__tp) ; extern int dysize (int __year) ; extern int nanosleep (const struct timespec *__requested_time, struct timespec *__remaining); extern int clock_getres (clockid_t __clock_id, struct timespec *__res) ; extern int clock_gettime (clockid_t __clock_id, struct timespec *__tp) ; extern int clock_settime (clockid_t __clock_id, const struct timespec *__tp) ; extern int clock_nanosleep (clockid_t __clock_id, int __flags, const struct timespec *__req, struct timespec *__rem); extern int clock_getcpuclockid (pid_t __pid, clockid_t *__clock_id) ; extern int timer_create (clockid_t __clock_id, struct sigevent * __evp, timer_t * __timerid) ; extern int timer_delete (timer_t __timerid) ; extern int timer_settime (timer_t __timerid, int __flags, const struct itimerspec * __value, struct itimerspec * __ovalue) ; extern int timer_gettime (timer_t __timerid, struct itimerspec *__value) ; extern int timer_getoverrun (timer_t __timerid) ; #line 400 "/usr/include/time.h" #line 415 "/usr/include/time.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_TIME_H" to "1" Checking for header: sys/time.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/sys/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 24 "/usr/include/sys/time.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 26 "/usr/include/sys/time.h" #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 28 "/usr/include/sys/time.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 30 "/usr/include/sys/time.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 32 "/usr/include/sys/time.h" #line 52 "/usr/include/sys/time.h" struct timezone { int tz_minuteswest; int tz_dsttime; }; typedef struct timezone * __timezone_ptr_t; extern int gettimeofday (struct timeval * __tv, __timezone_ptr_t __tz) ; extern int settimeofday (const struct timeval *__tv, const struct timezone *__tz) ; extern int adjtime (const struct timeval *__delta, struct timeval *__olddelta) ; enum __itimer_which { ITIMER_REAL = 0, ITIMER_VIRTUAL = 1, ITIMER_PROF = 2 }; struct itimerval { struct timeval it_interval; struct timeval it_value; }; typedef int __itimer_which_t; extern int getitimer (__itimer_which_t __which, struct itimerval *__value) ; extern int setitimer (__itimer_which_t __which, const struct itimerval * __new, struct itimerval * __old) ; extern int utimes (const char *__file, const struct timeval __tvp[2]) ; extern int lutimes (const char *__file, const struct timeval __tvp[2]) ; extern int futimes (int __fd, const struct timeval __tvp[2]) ; #line 159 "/usr/include/sys/time.h" #line 190 "/usr/include/sys/time.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_TIME_H" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include int main() { struct tm *tp = 0; if (tp); ; return 0; } Defined "TIME_WITH_SYS_TIME" to "1" ================================================================================ TEST checkMath from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:203) TESTING: checkMath from config.headers(config/BuildSystem/config/headers.py:203) Checks for the math headers and defines Checking for header: math.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/math.h" #line 1 "/usr/include/math.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 29 "/usr/include/math.h" #line 1 "/usr/include/bits/huge_val.h" #line 40 "/usr/include/bits/huge_val.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 42 "/usr/include/bits/huge_val.h" typedef union { unsigned char __c[8]; double __d; } __huge_val_t; #line 51 "/usr/include/bits/huge_val.h" static __huge_val_t __huge_val = { { 0x7f, 0xf0, 0, 0, 0, 0, 0, 0 } }; #line 35 "/usr/include/math.h" #line 1 "/usr/include/bits/huge_valf.h" #line 40 "/usr/include/bits/huge_valf.h" typedef union { unsigned char __c[4]; float __f; } __huge_valf_t; #line 49 "/usr/include/bits/huge_valf.h" static __huge_valf_t __huge_valf = { { 0x7f, 0x80, 0, 0 } }; #line 37 "/usr/include/math.h" #line 1 "/usr/include/bits/huge_vall.h" #line 34 "/usr/include/bits/huge_vall.h" typedef union { unsigned char __c[16]; long double __ld; } __huge_vall_t; #line 43 "/usr/include/bits/huge_vall.h" static __huge_vall_t __huge_vall = { { 0x7f, 0xff, 0,0,0,0,0,0,0,0,0,0,0,0,0,0 } }; #line 38 "/usr/include/math.h" #line 1 "/usr/include/bits/inf.h" #line 41 "/usr/include/math.h" #line 1 "/usr/include/bits/nan.h" #line 39 "/usr/include/bits/nan.h" #line 48 "/usr/include/bits/nan.h" static union { unsigned char __c[4]; float __d; } __nan_union = { { 0x7f, 0xc0, 0, 0 } }; #line 44 "/usr/include/math.h" #line 1 "/usr/include/bits/mathdef.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/mathdef.h" #line 47 "/usr/include/bits/mathdef.h" typedef double float_t; typedef double double_t; #line 48 "/usr/include/math.h" #line 66 "/usr/include/math.h" #line 1 "/usr/include/bits/mathcalls.h" extern double acos (double __x) ; extern double __acos (double __x) ; extern double asin (double __x) ; extern double __asin (double __x) ; extern double atan (double __x) ; extern double __atan (double __x) ; extern double atan2 (double __y, double __x) ; extern double __atan2 (double __y, double __x) ; extern double cos (double __x) ; extern double __cos (double __x) ; extern double sin (double __x) ; extern double __sin (double __x) ; extern double tan (double __x) ; extern double __tan (double __x) ; extern double cosh (double __x) ; extern double __cosh (double __x) ; extern double sinh (double __x) ; extern double __sinh (double __x) ; extern double tanh (double __x) ; extern double __tanh (double __x) ; extern double acosh (double __x) ; extern double __acosh (double __x) ; extern double asinh (double __x) ; extern double __asinh (double __x) ; extern double atanh (double __x) ; extern double __atanh (double __x) ; extern double exp (double __x) ; extern double __exp (double __x) ; extern double frexp (double __x, int *__exponent) ; extern double __frexp (double __x, int *__exponent) ; extern double ldexp (double __x, int __exponent) ; extern double __ldexp (double __x, int __exponent) ; extern double log (double __x) ; extern double __log (double __x) ; extern double log10 (double __x) ; extern double __log10 (double __x) ; extern double modf (double __x, double *__iptr) ; extern double __modf (double __x, double *__iptr) ; #line 125 "/usr/include/bits/mathcalls.h" extern double expm1 (double __x) ; extern double __expm1 (double __x) ; extern double log1p (double __x) ; extern double __log1p (double __x) ; extern double logb (double __x) ; extern double __logb (double __x) ; extern double exp2 (double __x) ; extern double __exp2 (double __x) ; extern double log2 (double __x) ; extern double __log2 (double __x) ; extern double pow (double __x, double __y) ; extern double __pow (double __x, double __y) ; extern double sqrt (double __x) ; extern double __sqrt (double __x) ; extern double hypot (double __x, double __y) ; extern double __hypot (double __x, double __y) ; extern double cbrt (double __x) ; extern double __cbrt (double __x) ; extern double ceil (double __x) ; extern double __ceil (double __x) ; extern double fabs (double __x) ; extern double __fabs (double __x) ; extern double floor (double __x) ; extern double __floor (double __x) ; extern double fmod (double __x, double __y) ; extern double __fmod (double __x, double __y) ; extern int __isinf (double __value) ; extern int __finite (double __value) ; extern int isinf (double __value) ; extern int finite (double __value) ; extern double drem (double __x, double __y) ; extern double __drem (double __x, double __y) ; extern double significand (double __x) ; extern double __significand (double __x) ; extern double copysign (double __x, double __y) ; extern double __copysign (double __x, double __y) ; extern double nan (const char *__tagb) ; extern double __nan (const char *__tagb) ; extern int __isnan (double __value) ; extern int isnan (double __value) ; extern double j0 (double) ; extern double __j0 (double) ; extern double j1 (double) ; extern double __j1 (double) ; extern double jn (int, double) ; extern double __jn (int, double) ; extern double y0 (double) ; extern double __y0 (double) ; extern double y1 (double) ; extern double __y1 (double) ; extern double yn (int, double) ; extern double __yn (int, double) ; extern double erf (double) ; extern double __erf (double) ; extern double erfc (double) ; extern double __erfc (double) ; extern double lgamma (double) ; extern double __lgamma (double) ; extern double tgamma (double) ; extern double __tgamma (double) ; extern double gamma (double) ; extern double __gamma (double) ; extern double lgamma_r (double, int *__signgamp) ; extern double __lgamma_r (double, int *__signgamp) ; extern double rint (double __x) ; extern double __rint (double __x) ; extern double nextafter (double __x, double __y) ; extern double __nextafter (double __x, double __y) ; extern double nexttoward (double __x, long double __y) ; extern double __nexttoward (double __x, long double __y) ; extern double remainder (double __x, double __y) ; extern double __remainder (double __x, double __y) ; extern double scalbn (double __x, int __n) ; extern double __scalbn (double __x, int __n) ; extern int ilogb (double __x) ; extern int __ilogb (double __x) ; extern double scalbln (double __x, long int __n) ; extern double __scalbln (double __x, long int __n) ; extern double nearbyint (double __x) ; extern double __nearbyint (double __x) ; extern double round (double __x) ; extern double __round (double __x) ; extern double trunc (double __x) ; extern double __trunc (double __x) ; extern double remquo (double __x, double __y, int *__quo) ; extern double __remquo (double __x, double __y, int *__quo) ; extern long int lrint (double __x) ; extern long int __lrint (double __x) ; extern long long int llrint (double __x) ; extern long long int __llrint (double __x) ; extern long int lround (double __x) ; extern long int __lround (double __x) ; extern long long int llround (double __x) ; extern long long int __llround (double __x) ; extern double fdim (double __x, double __y) ; extern double __fdim (double __x, double __y) ; extern double fmax (double __x, double __y) ; extern double __fmax (double __x, double __y) ; extern double fmin (double __x, double __y) ; extern double __fmin (double __x, double __y) ; extern int __fpclassify (double __value) ; extern int __signbit (double __value) ; extern double fma (double __x, double __y, double __z) ; extern double __fma (double __x, double __y, double __z) ; extern double scalb (double __x, double __n) ; extern double __scalb (double __x, double __n) ; #line 72 "/usr/include/math.h" #line 1 "/usr/include/bits/mathcalls.h" extern float acosf (float __x) ; extern float __acosf (float __x) ; extern float asinf (float __x) ; extern float __asinf (float __x) ; extern float atanf (float __x) ; extern float __atanf (float __x) ; extern float atan2f (float __y, float __x) ; extern float __atan2f (float __y, float __x) ; extern float cosf (float __x) ; extern float __cosf (float __x) ; extern float sinf (float __x) ; extern float __sinf (float __x) ; extern float tanf (float __x) ; extern float __tanf (float __x) ; extern float coshf (float __x) ; extern float __coshf (float __x) ; extern float sinhf (float __x) ; extern float __sinhf (float __x) ; extern float tanhf (float __x) ; extern float __tanhf (float __x) ; extern float acoshf (float __x) ; extern float __acoshf (float __x) ; extern float asinhf (float __x) ; extern float __asinhf (float __x) ; extern float atanhf (float __x) ; extern float __atanhf (float __x) ; extern float expf (float __x) ; extern float __expf (float __x) ; extern float frexpf (float __x, int *__exponent) ; extern float __frexpf (float __x, int *__exponent) ; extern float ldexpf (float __x, int __exponent) ; extern float __ldexpf (float __x, int __exponent) ; extern float logf (float __x) ; extern float __logf (float __x) ; extern float log10f (float __x) ; extern float __log10f (float __x) ; extern float modff (float __x, float *__iptr) ; extern float __modff (float __x, float *__iptr) ; #line 125 "/usr/include/bits/mathcalls.h" extern float expm1f (float __x) ; extern float __expm1f (float __x) ; extern float log1pf (float __x) ; extern float __log1pf (float __x) ; extern float logbf (float __x) ; extern float __logbf (float __x) ; extern float exp2f (float __x) ; extern float __exp2f (float __x) ; extern float log2f (float __x) ; extern float __log2f (float __x) ; extern float powf (float __x, float __y) ; extern float __powf (float __x, float __y) ; extern float sqrtf (float __x) ; extern float __sqrtf (float __x) ; extern float hypotf (float __x, float __y) ; extern float __hypotf (float __x, float __y) ; extern float cbrtf (float __x) ; extern float __cbrtf (float __x) ; extern float ceilf (float __x) ; extern float __ceilf (float __x) ; extern float fabsf (float __x) ; extern float __fabsf (float __x) ; extern float floorf (float __x) ; extern float __floorf (float __x) ; extern float fmodf (float __x, float __y) ; extern float __fmodf (float __x, float __y) ; extern int __isinff (float __value) ; extern int __finitef (float __value) ; extern int isinff (float __value) ; extern int finitef (float __value) ; extern float dremf (float __x, float __y) ; extern float __dremf (float __x, float __y) ; extern float significandf (float __x) ; extern float __significandf (float __x) ; extern float copysignf (float __x, float __y) ; extern float __copysignf (float __x, float __y) ; extern float nanf (const char *__tagb) ; extern float __nanf (const char *__tagb) ; extern int __isnanf (float __value) ; extern int isnanf (float __value) ; extern float j0f (float) ; extern float __j0f (float) ; extern float j1f (float) ; extern float __j1f (float) ; extern float jnf (int, float) ; extern float __jnf (int, float) ; extern float y0f (float) ; extern float __y0f (float) ; extern float y1f (float) ; extern float __y1f (float) ; extern float ynf (int, float) ; extern float __ynf (int, float) ; extern float erff (float) ; extern float __erff (float) ; extern float erfcf (float) ; extern float __erfcf (float) ; extern float lgammaf (float) ; extern float __lgammaf (float) ; extern float tgammaf (float) ; extern float __tgammaf (float) ; extern float gammaf (float) ; extern float __gammaf (float) ; extern float lgammaf_r (float, int *__signgamp) ; extern float __lgammaf_r (float, int *__signgamp) ; extern float rintf (float __x) ; extern float __rintf (float __x) ; extern float nextafterf (float __x, float __y) ; extern float __nextafterf (float __x, float __y) ; extern float nexttowardf (float __x, long double __y) ; extern float __nexttowardf (float __x, long double __y) ; extern float remainderf (float __x, float __y) ; extern float __remainderf (float __x, float __y) ; extern float scalbnf (float __x, int __n) ; extern float __scalbnf (float __x, int __n) ; extern int ilogbf (float __x) ; extern int __ilogbf (float __x) ; extern float scalblnf (float __x, long int __n) ; extern float __scalblnf (float __x, long int __n) ; extern float nearbyintf (float __x) ; extern float __nearbyintf (float __x) ; extern float roundf (float __x) ; extern float __roundf (float __x) ; extern float truncf (float __x) ; extern float __truncf (float __x) ; extern float remquof (float __x, float __y, int *__quo) ; extern float __remquof (float __x, float __y, int *__quo) ; extern long int lrintf (float __x) ; extern long int __lrintf (float __x) ; extern long long int llrintf (float __x) ; extern long long int __llrintf (float __x) ; extern long int lroundf (float __x) ; extern long int __lroundf (float __x) ; extern long long int llroundf (float __x) ; extern long long int __llroundf (float __x) ; extern float fdimf (float __x, float __y) ; extern float __fdimf (float __x, float __y) ; extern float fmaxf (float __x, float __y) ; extern float __fmaxf (float __x, float __y) ; extern float fminf (float __x, float __y) ; extern float __fminf (float __x, float __y) ; extern int __fpclassifyf (float __value) ; extern int __signbitf (float __value) ; extern float fmaf (float __x, float __y, float __z) ; extern float __fmaf (float __x, float __y, float __z) ; extern float scalbf (float __x, float __n) ; extern float __scalbf (float __x, float __n) ; #line 95 "/usr/include/math.h" #line 129 "/usr/include/math.h" #line 1 "/usr/include/bits/mathcalls.h" extern long double acosl (long double __x) ; extern long double __acosl (long double __x) ; extern long double asinl (long double __x) ; extern long double __asinl (long double __x) ; extern long double atanl (long double __x) ; extern long double __atanl (long double __x) ; extern long double atan2l (long double __y, long double __x) ; extern long double __atan2l (long double __y, long double __x) ; extern long double cosl (long double __x) ; extern long double __cosl (long double __x) ; extern long double sinl (long double __x) ; extern long double __sinl (long double __x) ; extern long double tanl (long double __x) ; extern long double __tanl (long double __x) ; extern long double coshl (long double __x) ; extern long double __coshl (long double __x) ; extern long double sinhl (long double __x) ; extern long double __sinhl (long double __x) ; extern long double tanhl (long double __x) ; extern long double __tanhl (long double __x) ; extern long double acoshl (long double __x) ; extern long double __acoshl (long double __x) ; extern long double asinhl (long double __x) ; extern long double __asinhl (long double __x) ; extern long double atanhl (long double __x) ; extern long double __atanhl (long double __x) ; extern long double expl (long double __x) ; extern long double __expl (long double __x) ; extern long double frexpl (long double __x, int *__exponent) ; extern long double __frexpl (long double __x, int *__exponent) ; extern long double ldexpl (long double __x, int __exponent) ; extern long double __ldexpl (long double __x, int __exponent) ; extern long double logl (long double __x) ; extern long double __logl (long double __x) ; extern long double log10l (long double __x) ; extern long double __log10l (long double __x) ; extern long double modfl (long double __x, long double *__iptr) ; extern long double __modfl (long double __x, long double *__iptr) ; #line 125 "/usr/include/bits/mathcalls.h" extern long double expm1l (long double __x) ; extern long double __expm1l (long double __x) ; extern long double log1pl (long double __x) ; extern long double __log1pl (long double __x) ; extern long double logbl (long double __x) ; extern long double __logbl (long double __x) ; extern long double exp2l (long double __x) ; extern long double __exp2l (long double __x) ; extern long double log2l (long double __x) ; extern long double __log2l (long double __x) ; extern long double powl (long double __x, long double __y) ; extern long double __powl (long double __x, long double __y) ; extern long double sqrtl (long double __x) ; extern long double __sqrtl (long double __x) ; extern long double hypotl (long double __x, long double __y) ; extern long double __hypotl (long double __x, long double __y) ; extern long double cbrtl (long double __x) ; extern long double __cbrtl (long double __x) ; extern long double ceill (long double __x) ; extern long double __ceill (long double __x) ; extern long double fabsl (long double __x) ; extern long double __fabsl (long double __x) ; extern long double floorl (long double __x) ; extern long double __floorl (long double __x) ; extern long double fmodl (long double __x, long double __y) ; extern long double __fmodl (long double __x, long double __y) ; extern int __isinfl (long double __value) ; extern int __finitel (long double __value) ; extern int isinfl (long double __value) ; extern int finitel (long double __value) ; extern long double dreml (long double __x, long double __y) ; extern long double __dreml (long double __x, long double __y) ; extern long double significandl (long double __x) ; extern long double __significandl (long double __x) ; extern long double copysignl (long double __x, long double __y) ; extern long double __copysignl (long double __x, long double __y) ; extern long double nanl (const char *__tagb) ; extern long double __nanl (const char *__tagb) ; extern int __isnanl (long double __value) ; extern int isnanl (long double __value) ; extern long double j0l (long double) ; extern long double __j0l (long double) ; extern long double j1l (long double) ; extern long double __j1l (long double) ; extern long double jnl (int, long double) ; extern long double __jnl (int, long double) ; extern long double y0l (long double) ; extern long double __y0l (long double) ; extern long double y1l (long double) ; extern long double __y1l (long double) ; extern long double ynl (int, long double) ; extern long double __ynl (int, long double) ; extern long double erfl (long double) ; extern long double __erfl (long double) ; extern long double erfcl (long double) ; extern long double __erfcl (long double) ; extern long double lgammal (long double) ; extern long double __lgammal (long double) ; extern long double tgammal (long double) ; extern long double __tgammal (long double) ; extern long double gammal (long double) ; extern long double __gammal (long double) ; extern long double lgammal_r (long double, int *__signgamp) ; extern long double __lgammal_r (long double, int *__signgamp) ; extern long double rintl (long double __x) ; extern long double __rintl (long double __x) ; extern long double nextafterl (long double __x, long double __y) ; extern long double __nextafterl (long double __x, long double __y) ; extern long double nexttowardl (long double __x, long double __y) ; extern long double __nexttowardl (long double __x, long double __y) ; extern long double remainderl (long double __x, long double __y) ; extern long double __remainderl (long double __x, long double __y) ; extern long double scalbnl (long double __x, int __n) ; extern long double __scalbnl (long double __x, int __n) ; extern int ilogbl (long double __x) ; extern int __ilogbl (long double __x) ; extern long double scalblnl (long double __x, long int __n) ; extern long double __scalblnl (long double __x, long int __n) ; extern long double nearbyintl (long double __x) ; extern long double __nearbyintl (long double __x) ; extern long double roundl (long double __x) ; extern long double __roundl (long double __x) ; extern long double truncl (long double __x) ; extern long double __truncl (long double __x) ; extern long double remquol (long double __x, long double __y, int *__quo) ; extern long double __remquol (long double __x, long double __y, int *__quo) ; extern long int lrintl (long double __x) ; extern long int __lrintl (long double __x) ; extern long long int llrintl (long double __x) ; extern long long int __llrintl (long double __x) ; extern long int lroundl (long double __x) ; extern long int __lroundl (long double __x) ; extern long long int llroundl (long double __x) ; extern long long int __llroundl (long double __x) ; extern long double fdiml (long double __x, long double __y) ; extern long double __fdiml (long double __x, long double __y) ; extern long double fmaxl (long double __x, long double __y) ; extern long double __fmaxl (long double __x, long double __y) ; extern long double fminl (long double __x, long double __y) ; extern long double __fminl (long double __x, long double __y) ; extern int __fpclassifyl (long double __value) ; extern int __signbitl (long double __value) ; extern long double fmal (long double __x, long double __y, long double __z) ; extern long double __fmal (long double __x, long double __y, long double __z) ; extern long double scalbl (long double __x, long double __n) ; extern long double __scalbl (long double __x, long double __n) ; #line 142 "/usr/include/math.h" extern int signgam; enum { FP_NAN, FP_INFINITE, FP_ZERO, FP_SUBNORMAL, FP_NORMAL }; #line 223 "/usr/include/math.h" #line 235 "/usr/include/math.h" #line 247 "/usr/include/math.h" #line 263 "/usr/include/math.h" #line 275 "/usr/include/math.h" typedef enum { _IEEE_ = -1, _SVID_, _XOPEN_, _POSIX_, _ISOC_ } _LIB_VERSION_TYPE; extern _LIB_VERSION_TYPE _LIB_VERSION; struct exception { int type; char *name; double arg1; double arg2; double retval; }; extern int matherr (struct exception *__exc); #line 334 "/usr/include/math.h" #line 346 "/usr/include/math.h" #line 364 "/usr/include/math.h" #line 383 "/usr/include/math.h" #line 406 "/usr/include/math.h" #line 422 "/usr/include/math.h" #line 430 "/usr/include/math.h" #line 438 "/usr/include/math.h" #line 446 "/usr/include/math.h" #line 454 "/usr/include/math.h" #line 462 "/usr/include/math.h" #line 3 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/math.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_MATH_H" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double pi = M_PI; if (pi); ; return 0; } Found math #defines, like M_PI ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/socket.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/sys/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/socket.h" #line 1 "/usr/include/sys/uio.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/sys/uio.h" #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; typedef char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 25 "/usr/include/sys/uio.h" #line 1 "/usr/include/bits/uio.h" struct iovec { void *iov_base; size_t iov_len; }; #line 30 "/usr/include/sys/uio.h" extern ssize_t readv (int __fd, const struct iovec *__iovec, int __count); extern ssize_t writev (int __fd, const struct iovec *__iovec, int __count); #line 29 "/usr/include/sys/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 31 "/usr/include/sys/socket.h" #line 1 "/usr/include/bits/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 31 "/usr/include/bits/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 7 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "/usr/include/bits/posix1_lim.h" #line 1 "/usr/include/bits/local_lim.h" #line 34 "/usr/include/bits/local_lim.h" #line 1 "/usr/include/linux/limits.h" #line 17 "/usr/include/linux/limits.h" #line 37 "/usr/include/bits/local_lim.h" #line 154 "/usr/include/bits/posix1_lim.h" #line 62 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "/usr/include/bits/posix2_lim.h" #line 87 "/usr/include/bits/posix2_lim.h" #line 66 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 33 "/usr/include/bits/socket.h" typedef __socklen_t socklen_t; enum __socket_type { SOCK_STREAM = 1, SOCK_DGRAM = 2, SOCK_RAW = 3, SOCK_RDM = 4, SOCK_SEQPACKET = 5, SOCK_PACKET = 10 }; #line 96 "/usr/include/bits/socket.h" #line 130 "/usr/include/bits/socket.h" #line 142 "/usr/include/bits/socket.h" #line 1 "/usr/include/bits/sockaddr.h" typedef unsigned short int sa_family_t; #line 148 "/usr/include/bits/socket.h" struct sockaddr { sa_family_t sa_family; char sa_data[14]; }; #line 166 "/usr/include/bits/socket.h" struct sockaddr_storage { sa_family_t ss_family; __uint64_t __ss_align; char __ss_padding[(128 - (2 * sizeof (__uint64_t)))]; }; enum { MSG_OOB = 0x01, MSG_PEEK = 0x02, MSG_DONTROUTE = 0x04, #line 189 "/usr/include/bits/socket.h" MSG_CTRUNC = 0x08, MSG_PROXY = 0x10, MSG_TRUNC = 0x20, MSG_DONTWAIT = 0x40, MSG_EOR = 0x80, MSG_WAITALL = 0x100, MSG_FIN = 0x200, MSG_SYN = 0x400, MSG_CONFIRM = 0x800, MSG_RST = 0x1000, MSG_ERRQUEUE = 0x2000, MSG_NOSIGNAL = 0x4000, MSG_MORE = 0x8000, MSG_CMSG_CLOEXEC = 0x40000000 }; struct msghdr { void *msg_name; socklen_t msg_namelen; struct iovec *msg_iov; size_t msg_iovlen; void *msg_control; size_t msg_controllen; int msg_flags; }; struct cmsghdr { size_t cmsg_len; int cmsg_level; int cmsg_type; unsigned char __cmsg_data []; }; #line 272 "/usr/include/bits/socket.h" extern struct cmsghdr *__cmsg_nxthdr (struct msghdr *__mhdr, struct cmsghdr *__cmsg) ; #line 297 "/usr/include/bits/socket.h" enum { SCM_RIGHTS = 0x01 , SCM_CREDENTIALS = 0x02 }; struct ucred { pid_t pid; uid_t uid; gid_t gid; }; #line 1 "/usr/include/asm/socket.h" #line 1 "/usr/include/asm-s64fx/socket.h" #line 1 "/usr/include/asm/sockios.h" #line 1 "/usr/include/asm-s64fx/sockios.h" #line 12 "/usr/include/asm-s64fx/sockios.h" #line 6 "/usr/include/asm/sockios.h" #line 6 "/usr/include/asm-s64fx/socket.h" #line 19 "/usr/include/asm-s64fx/socket.h" #line 26 "/usr/include/asm-s64fx/socket.h" #line 36 "/usr/include/asm-s64fx/socket.h" #line 6 "/usr/include/asm/socket.h" #line 321 "/usr/include/bits/socket.h" struct linger { int l_onoff; int l_linger; }; #line 37 "/usr/include/sys/socket.h" struct osockaddr { unsigned short int sa_family; unsigned char sa_data[14]; }; enum { SHUT_RD = 0, SHUT_WR, SHUT_RDWR }; #line 96 "/usr/include/sys/socket.h" extern int socket (int __domain, int __type, int __protocol) ; extern int socketpair (int __domain, int __type, int __protocol, int __fds[2]) ; extern int bind (int __fd, const struct sockaddr * __addr, socklen_t __len) ; extern int getsockname (int __fd, struct sockaddr * __addr, socklen_t * __len) ; extern int connect (int __fd, const struct sockaddr * __addr, socklen_t __len); extern int getpeername (int __fd, struct sockaddr * __addr, socklen_t * __len) ; extern ssize_t send (int __fd, const void *__buf, size_t __n, int __flags); extern ssize_t recv (int __fd, void *__buf, size_t __n, int __flags); extern ssize_t sendto (int __fd, const void *__buf, size_t __n, int __flags, const struct sockaddr * __addr, socklen_t __addr_len); extern ssize_t recvfrom (int __fd, void * __buf, size_t __n, int __flags, struct sockaddr * __addr, socklen_t * __addr_len); extern ssize_t sendmsg (int __fd, const struct msghdr *__message, int __flags); extern ssize_t recvmsg (int __fd, struct msghdr *__message, int __flags); extern int getsockopt (int __fd, int __level, int __optname, void * __optval, socklen_t * __optlen) ; extern int setsockopt (int __fd, int __level, int __optname, const void *__optval, socklen_t __optlen) ; extern int listen (int __fd, int __n) ; extern int accept (int __fd, struct sockaddr * __addr, socklen_t * __addr_len); extern int shutdown (int __fd, int __how) ; extern int sockatmark (int __fd) ; extern int isfdtype (int __fd, int __fdtype) ; #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_SOCKET_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/types.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; typedef char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_TYPES_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: malloc.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/malloc.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/malloc.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef long ptrdiff_t; #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef int wchar_t; #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 26 "/usr/include/malloc.h" #line 40 "/usr/include/malloc.h" extern void *malloc (size_t __size) ; extern void *calloc (size_t __nmemb, size_t __size) ; extern void *realloc (void *__ptr, size_t __size) ; extern void free (void *__ptr); extern void cfree (void *__ptr); extern void *memalign (size_t __alignment, size_t __size) ; extern void *valloc (size_t __size) ; extern void * pvalloc (size_t __size) ; extern void *(*__morecore) (ptrdiff_t __size); extern void *__default_morecore (ptrdiff_t __size) ; struct mallinfo { int arena; int ordblks; int smblks; int hblks; int hblkhd; int usmblks; int fsmblks; int uordblks; int fordblks; int keepcost; }; extern struct mallinfo mallinfo (void); #line 122 "/usr/include/malloc.h" #line 130 "/usr/include/malloc.h" extern int mallopt (int __param, int __val); extern int malloc_trim (size_t __pad); extern size_t malloc_usable_size (void *__ptr); extern void malloc_stats (void); extern void *malloc_get_state (void); extern int malloc_set_state (void *__ptr); extern void (*__malloc_initialize_hook) (void); extern void (*__free_hook) (void *__ptr, const void *); extern void *(*__malloc_hook) (size_t __size, const void *); extern void *(*__realloc_hook) (void *__ptr, size_t __size, const void *); extern void *(*__memalign_hook) (size_t __alignment, size_t __size, const void *); extern void (*__after_morecore_hook) (void); extern void __malloc_check_init (void); #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_MALLOC_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: time.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 30 "/usr/include/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 40 "/usr/include/time.h" #line 1 "/usr/include/bits/time.h" #line 43 "/usr/include/bits/time.h" #line 44 "/usr/include/time.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 58 "/usr/include/time.h" typedef __clock_t clock_t; typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; struct timespec { __time_t tv_sec; long int tv_nsec; }; struct tm { int tm_sec; int tm_min; int tm_hour; int tm_mday; int tm_mon; int tm_year; int tm_wday; int tm_yday; int tm_isdst; long int tm_gmtoff; const char *tm_zone; }; struct itimerspec { struct timespec it_interval; struct timespec it_value; }; struct sigevent; typedef __pid_t pid_t; extern clock_t clock (void) ; extern time_t time (time_t *__timer) ; extern double difftime (time_t __time1, time_t __time0) ; extern time_t mktime (struct tm *__tp) ; extern size_t strftime (char * __s, size_t __maxsize, const char * __format, const struct tm * __tp) ; #line 212 "/usr/include/time.h" #line 227 "/usr/include/time.h" extern struct tm *gmtime (const time_t *__timer) ; extern struct tm *localtime (const time_t *__timer) ; extern struct tm *gmtime_r (const time_t * __timer, struct tm * __tp) ; extern struct tm *localtime_r (const time_t * __timer, struct tm * __tp) ; extern char *asctime (const struct tm *__tp) ; extern char *ctime (const time_t *__timer) ; extern char *asctime_r (const struct tm * __tp, char * __buf) ; extern char *ctime_r (const time_t * __timer, char * __buf) ; extern char *__tzname[2]; extern int __daylight; extern long int __timezone; extern char *tzname[2]; extern void tzset (void) ; extern int daylight; extern long int timezone; extern int stime (const time_t *__when) ; extern time_t timegm (struct tm *__tp) ; extern time_t timelocal (struct tm *__tp) ; extern int dysize (int __year) ; extern int nanosleep (const struct timespec *__requested_time, struct timespec *__remaining); extern int clock_getres (clockid_t __clock_id, struct timespec *__res) ; extern int clock_gettime (clockid_t __clock_id, struct timespec *__tp) ; extern int clock_settime (clockid_t __clock_id, const struct timespec *__tp) ; extern int clock_nanosleep (clockid_t __clock_id, int __flags, const struct timespec *__req, struct timespec *__rem); extern int clock_getcpuclockid (pid_t __pid, clockid_t *__clock_id) ; extern int timer_create (clockid_t __clock_id, struct sigevent * __evp, timer_t * __timerid) ; extern int timer_delete (timer_t __timerid) ; extern int timer_settime (timer_t __timerid, int __flags, const struct itimerspec * __value, struct itimerspec * __ovalue) ; extern int timer_gettime (timer_t __timerid, struct itimerspec *__value) ; extern int timer_getoverrun (timer_t __timerid) ; #line 400 "/usr/include/time.h" #line 415 "/usr/include/time.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_TIME_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: Direct.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "Direct.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "Direct.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "Direct.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c".: ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: Ws2tcpip.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "Ws2tcpip.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "Ws2tcpip.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "Ws2tcpip.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c".: ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: endian.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_ENDIAN_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: ieeefp.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "ieeefp.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "ieeefp.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "ieeefp.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c".: ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: strings.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/strings.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/strings.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 30 "/usr/include/strings.h" extern int bcmp (const void *__s1, const void *__s2, size_t __n) ; extern void bcopy (const void *__src, void *__dest, size_t __n) ; extern void bzero (void *__s, size_t __n) ; extern int ffs (int __i) ; extern char *index (const char *__s, int __c) ; extern char *rindex (const char *__s, int __c) ; extern int strcasecmp (const char *__s1, const char *__s2) ; extern int strncasecmp (const char *__s1, const char *__s2, size_t __n) ; #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_STRINGS_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sched.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/sched.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 24 "/usr/include/sched.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 27 "/usr/include/sched.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 30 "/usr/include/sched.h" #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 33 "/usr/include/sched.h" #line 1 "/usr/include/bits/sched.h" #line 36 "/usr/include/bits/sched.h" #line 64 "/usr/include/bits/sched.h" struct sched_param { int __sched_priority; }; extern int clone (int (*__fn) (void *__arg), void *__child_stack, int __flags, void *__arg, ...) ; extern int unshare (int __flags) ; extern int sched_getcpu (void) ; struct __sched_param { int __sched_priority; }; typedef unsigned long int __cpu_mask; typedef struct { __cpu_mask __bits[1024 / (8 * sizeof (__cpu_mask))]; } cpu_set_t; #line 146 "/usr/include/bits/sched.h" #line 164 "/usr/include/bits/sched.h" #line 174 "/usr/include/bits/sched.h" extern int __sched_cpucount (size_t __setsize, const cpu_set_t *__setp) ; extern cpu_set_t *__sched_cpualloc (size_t __count) ; extern void __sched_cpufree (cpu_set_t *__set) ; #line 36 "/usr/include/sched.h" extern int sched_setparam (__pid_t __pid, const struct sched_param *__param) ; extern int sched_getparam (__pid_t __pid, struct sched_param *__param) ; extern int sched_setscheduler (__pid_t __pid, int __policy, const struct sched_param *__param) ; extern int sched_getscheduler (__pid_t __pid) ; extern int sched_yield (void) ; extern int sched_get_priority_max (int __algorithm) ; extern int sched_get_priority_min (int __algorithm) ; extern int sched_rr_get_interval (__pid_t __pid, struct timespec *__t) ; #line 117 "/usr/include/sched.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SCHED_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: cxxabi.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "cxxabi.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "cxxabi.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "cxxabi.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c".: ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/systeminfo.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "sys/systeminfo.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "sys/systeminfo.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "sys/systeminfo.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c".: ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: dos.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "dos.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "dos.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "dos.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c".: ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: WindowsX.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "WindowsX.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "WindowsX.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "WindowsX.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c".: ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/sysinfo.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/sys/sysinfo.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/sys/sysinfo.h" #line 1 "/usr/include/linux/kernel.h" struct sysinfo { long uptime; unsigned long loads[3]; unsigned long totalram; unsigned long freeram; unsigned long sharedram; unsigned long bufferram; unsigned long totalswap; unsigned long freeswap; unsigned short procs; unsigned short pad; unsigned long totalhigh; unsigned long freehigh; unsigned int mem_unit; char _f[20-2*sizeof(long)-sizeof(int)]; }; #line 26 "/usr/include/sys/sysinfo.h" extern int sysinfo (struct sysinfo *__info) ; extern int get_nprocs_conf (void) ; extern int get_nprocs (void) ; extern long int get_phys_pages (void) ; extern long int get_avphys_pages (void) ; #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_SYSINFO_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/wait.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/sys/wait.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/wait.h" #line 1 "/usr/include/signal.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 30 "/usr/include/signal.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 100 "/usr/include/bits/sigset.h" extern int __sigismember (const __sigset_t *, int); extern int __sigaddset (__sigset_t *, int); extern int __sigdelset (__sigset_t *, int); #line 124 "/usr/include/bits/sigset.h" #line 34 "/usr/include/signal.h" typedef __sig_atomic_t sig_atomic_t; typedef __sigset_t sigset_t; #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 58 "/usr/include/signal.h" #line 1 "/usr/include/bits/signum.h" #line 52 "/usr/include/bits/signum.h" #line 72 "/usr/include/bits/signum.h" #line 59 "/usr/include/signal.h" typedef __pid_t pid_t; typedef __uid_t uid_t; typedef void (*__sighandler_t) (int); extern __sighandler_t __sysv_signal (int __sig, __sighandler_t __handler) ; extern __sighandler_t signal (int __sig, __sighandler_t __handler) ; #line 104 "/usr/include/signal.h" #line 112 "/usr/include/signal.h" extern int kill (__pid_t __pid, int __sig) ; extern int killpg (__pid_t __pgrp, int __sig) ; extern int raise (int __sig) ; extern __sighandler_t ssignal (int __sig, __sighandler_t __handler) ; extern int gsignal (int __sig) ; extern void psignal (int __sig, const char *__s); extern int __sigpause (int __sig_or_mask, int __is_sig); #line 169 "/usr/include/signal.h" extern int sigblock (int __mask) ; extern int sigsetmask (int __mask) ; extern int siggetmask (void) ; typedef __sighandler_t sig_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 210 "/usr/include/signal.h" #line 1 "/usr/include/bits/siginfo.h" #line 1 "/usr/include/bits/wordsize.h" #line 26 "/usr/include/bits/siginfo.h" typedef union sigval { int sival_int; void *sival_ptr; } sigval_t; #line 50 "/usr/include/bits/siginfo.h" typedef struct siginfo { int si_signo; int si_errno; int si_code; union { int _pad[((128 / sizeof (int)) - 4)]; struct { __pid_t si_pid; __uid_t si_uid; } _kill; struct { int si_tid; int si_overrun; sigval_t si_sigval; } _timer; struct { __pid_t si_pid; __uid_t si_uid; sigval_t si_sigval; } _rt; struct { __pid_t si_pid; __uid_t si_uid; int si_status; __clock_t si_utime; __clock_t si_stime; } _sigchld; struct { void *si_addr; int si_trapno; } _sigfault; struct { int si_band; int si_fd; } _sigpoll; } _sifields; } siginfo_t; #line 127 "/usr/include/bits/siginfo.h" enum { SI_ASYNCNL = -60, SI_TKILL = -6, SI_SIGIO, SI_ASYNCIO, SI_MESGQ, SI_TIMER, SI_QUEUE, SI_USER, SI_KERNEL = 0x80 }; enum { ILL_ILLOPC = 1, ILL_ILLOPN, ILL_ILLADR, ILL_ILLTRP, ILL_PRVOPC, ILL_PRVREG, ILL_COPROC, ILL_BADSTK }; enum { FPE_INTDIV = 1, FPE_INTOVF, FPE_FLTDIV, FPE_FLTOVF, FPE_FLTUND, FPE_FLTRES, FPE_FLTINV, FPE_FLTSUB }; enum { SEGV_MAPERR = 1, SEGV_ACCERR }; enum { BUS_ADRALN = 1, BUS_ADRERR, BUS_OBJERR }; enum { TRAP_BRKPT = 1, TRAP_TRACE }; enum { CLD_EXITED = 1, CLD_KILLED, CLD_DUMPED, CLD_TRAPPED, CLD_STOPPED, CLD_CONTINUED }; enum { POLL_IN = 1, POLL_OUT, POLL_MSG, POLL_ERR, POLL_PRI, POLL_HUP }; enum { EMT_TAGOVF = 1 }; #line 281 "/usr/include/bits/siginfo.h" typedef struct sigevent { sigval_t sigev_value; int sigev_signo; int sigev_notify; union { int _pad[((64 / sizeof (int)) - 4)]; struct { void (*_function) (sigval_t); void *_attribute; } _sigev_thread; } _sigev_un; } sigevent_t; enum { SIGEV_SIGNAL = 0, SIGEV_NONE, SIGEV_THREAD, SIGEV_THREAD_ID = 4 }; #line 213 "/usr/include/signal.h" extern int sigemptyset (sigset_t *__set) ; extern int sigfillset (sigset_t *__set) ; extern int sigaddset (sigset_t *__set, int __signo) ; extern int sigdelset (sigset_t *__set, int __signo) ; extern int sigismember (const sigset_t *__set, int __signo) ; #line 243 "/usr/include/signal.h" #line 1 "/usr/include/bits/sigaction.h" struct sigaction { union { __sighandler_t sa_handler; void (*sa_sigaction) (int, siginfo_t *, void *); } __sigaction_handler; __sigset_t sa_mask; unsigned long sa_flags; void (*sa_restorer) (void); }; #line 66 "/usr/include/bits/sigaction.h" #line 247 "/usr/include/signal.h" extern int sigprocmask (int __how, const sigset_t * __set, sigset_t * __oset) ; extern int sigsuspend (const sigset_t *__set) ; extern int sigaction (int __sig, const struct sigaction * __act, struct sigaction * __oact) ; extern int sigpending (sigset_t *__set) ; extern int sigwait (const sigset_t * __set, int * __sig) ; extern int sigwaitinfo (const sigset_t * __set, siginfo_t * __info) ; extern int sigtimedwait (const sigset_t * __set, siginfo_t * __info, const struct timespec * __timeout) ; extern int sigqueue (__pid_t __pid, int __sig, const union sigval __val) ; extern const char *const _sys_siglist[65]; extern const char *const sys_siglist[65]; struct sigvec { __sighandler_t sv_handler; int sv_mask; int sv_flags; }; extern int sigvec (int __sig, const struct sigvec *__vec, struct sigvec *__ovec) ; #line 1 "/usr/include/bits/sigcontext.h" #line 1 "/usr/include/bits/wordsize.h" #line 24 "/usr/include/bits/sigcontext.h" #line 1 "/usr/include/stdint.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/stdint.h" #line 1 "/usr/include/bits/wchar.h" #line 28 "/usr/include/stdint.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/stdint.h" typedef signed char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char uint8_t; typedef unsigned short int uint16_t; typedef unsigned int uint32_t; typedef unsigned long int uint64_t; typedef signed char int_least8_t; typedef short int int_least16_t; typedef int int_least32_t; typedef long int int_least64_t; typedef unsigned char uint_least8_t; typedef unsigned short int uint_least16_t; typedef unsigned int uint_least32_t; typedef unsigned long int uint_least64_t; typedef signed char int_fast8_t; typedef long int int_fast16_t; typedef long int int_fast32_t; typedef long int int_fast64_t; #line 102 "/usr/include/stdint.h" typedef unsigned char uint_fast8_t; typedef unsigned long int uint_fast16_t; typedef unsigned long int uint_fast32_t; typedef unsigned long int uint_fast64_t; #line 115 "/usr/include/stdint.h" typedef long int intptr_t; typedef unsigned long int uintptr_t; #line 131 "/usr/include/stdint.h" typedef long int intmax_t; typedef unsigned long int uintmax_t; #line 143 "/usr/include/stdint.h" #line 156 "/usr/include/stdint.h" #line 205 "/usr/include/stdint.h" #line 215 "/usr/include/stdint.h" #line 226 "/usr/include/stdint.h" #line 238 "/usr/include/stdint.h" #line 259 "/usr/include/stdint.h" #line 298 "/usr/include/stdint.h" #line 308 "/usr/include/stdint.h" #line 317 "/usr/include/stdint.h" #line 25 "/usr/include/bits/sigcontext.h" #line 48 "/usr/include/bits/sigcontext.h" typedef struct { unsigned int si_float_regs [64]; unsigned long si_fsr; unsigned long si_gsr; unsigned long si_fprs; uint64_t si_xglob_regs[32]; uint32_t si_xfloat_regs[448]; uint64_t si_xasr; } __siginfo_fpu_t; struct sigcontext { char sigc_info[128]; struct { unsigned long u_regs[16]; unsigned long tstate; unsigned long tpc; unsigned long tnpc; unsigned int y; unsigned int fprs; } sigc_regs; __siginfo_fpu_t * sigc_fpu_save; uint64_t si_txar; uint64_t si_sccr; struct { void * ss_sp; int ss_flags; unsigned long ss_size; } sigc_stack; unsigned long sigc_mask; }; #line 334 "/usr/include/signal.h" extern int sigreturn (struct sigcontext *__scp) ; #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 344 "/usr/include/signal.h" extern int siginterrupt (int __sig, int __interrupt) ; #line 1 "/usr/include/bits/sigstack.h" struct sigstack { void *ss_sp; int ss_onstack; }; enum { SS_ONSTACK = 1, SS_DISABLE }; typedef struct sigaltstack { void *ss_sp; int ss_flags; size_t ss_size; } stack_t; #line 351 "/usr/include/signal.h" extern int sigstack (struct sigstack *__ss, struct sigstack *__oss) ; extern int sigaltstack (const struct sigaltstack * __ss, struct sigaltstack * __oss) ; #line 384 "/usr/include/signal.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 389 "/usr/include/signal.h" #line 1 "/usr/include/bits/sigthread.h" extern int pthread_sigmask (int __how, const __sigset_t * __newmask, __sigset_t * __oldmask); extern int pthread_kill (pthread_t __threadid, int __signo) ; #line 390 "/usr/include/signal.h" extern int __libc_current_sigrtmin (void) ; extern int __libc_current_sigrtmax (void) ; #line 32 "/usr/include/sys/wait.h" #line 1 "/usr/include/sys/resource.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/sys/resource.h" #line 1 "/usr/include/bits/resource.h" enum __rlimit_resource { RLIMIT_CPU = 0, RLIMIT_FSIZE = 1, RLIMIT_DATA = 2, RLIMIT_STACK = 3, RLIMIT_CORE = 4, __RLIMIT_RSS = 5, RLIMIT_NOFILE = 6, __RLIMIT_OFILE = RLIMIT_NOFILE, RLIMIT_AS = 9, __RLIMIT_NPROC = 7, __RLIMIT_MEMLOCK = 8, __RLIMIT_LOCKS = 10, __RLIMIT_SIGPENDING = 11, __RLIMIT_MSGQUEUE = 12, __RLIMIT_NICE = 13, __RLIMIT_RTPRIO = 14, __RLIMIT_NLIMITS = 15, __RLIM_NLIMITS = __RLIMIT_NLIMITS }; #line 135 "/usr/include/bits/resource.h" typedef __rlim_t rlim_t; #line 150 "/usr/include/bits/resource.h" struct rlimit { rlim_t rlim_cur; rlim_t rlim_max; }; #line 168 "/usr/include/bits/resource.h" enum __rusage_who { RUSAGE_SELF = 0, RUSAGE_CHILDREN = -1 }; #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 183 "/usr/include/bits/resource.h" struct rusage { struct timeval ru_utime; struct timeval ru_stime; long int ru_maxrss; long int ru_ixrss; long int ru_idrss; long int ru_isrss; long int ru_minflt; long int ru_majflt; long int ru_nswap; long int ru_inblock; long int ru_oublock; long int ru_msgsnd; long int ru_msgrcv; long int ru_nsignals; long int ru_nvcsw; long int ru_nivcsw; }; enum __priority_which { PRIO_PROCESS = 0, PRIO_PGRP = 1, PRIO_USER = 2 }; #line 26 "/usr/include/sys/resource.h" typedef __id_t id_t; typedef int __rlimit_resource_t; typedef int __rusage_who_t; typedef int __priority_which_t; extern int getrlimit (__rlimit_resource_t __resource, struct rlimit *__rlimits) ; #line 65 "/usr/include/sys/resource.h" extern int setrlimit (__rlimit_resource_t __resource, const struct rlimit *__rlimits) ; #line 85 "/usr/include/sys/resource.h" extern int getrusage (__rusage_who_t __who, struct rusage *__usage) ; extern int getpriority (__priority_which_t __which, id_t __who) ; extern int setpriority (__priority_which_t __which, id_t __who, int __prio) ; #line 33 "/usr/include/sys/wait.h" #line 1 "/usr/include/bits/waitflags.h" #line 39 "/usr/include/sys/wait.h" #line 52 "/usr/include/sys/wait.h" #line 70 "/usr/include/sys/wait.h" #line 78 "/usr/include/sys/wait.h" #line 1 "/usr/include/bits/waitstatus.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 66 "/usr/include/bits/waitstatus.h" union wait { int w_status; struct { #line 79 "/usr/include/bits/waitstatus.h" unsigned int:16; unsigned int __w_retcode:8; unsigned int __w_coredump:1; unsigned int __w_termsig:7; } __wait_terminated; struct { #line 93 "/usr/include/bits/waitstatus.h" unsigned int:16; unsigned int __w_stopsig:8; unsigned int __w_stopval:8; } __wait_stopped; }; #line 81 "/usr/include/sys/wait.h" #line 92 "/usr/include/sys/wait.h" #line 99 "/usr/include/sys/wait.h" typedef enum { P_ALL, P_PID, P_PGID } idtype_t; extern __pid_t wait (void * __stat_loc); extern __pid_t waitpid (__pid_t __pid, int *__stat_loc, int __options); #line 1 "/usr/include/bits/siginfo.h" #line 1 "/usr/include/bits/wordsize.h" #line 26 "/usr/include/bits/siginfo.h" #line 39 "/usr/include/bits/siginfo.h" #line 268 "/usr/include/bits/siginfo.h" #line 144 "/usr/include/sys/wait.h" extern int waitid (idtype_t __idtype, __id_t __id, siginfo_t *__infop, int __options); struct rusage; extern __pid_t wait3 (void * __stat_loc, int __options, struct rusage * __usage) ; extern __pid_t wait4 (__pid_t __pid, void * __stat_loc, int __options, struct rusage *__usage) ; #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_WAIT_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: stdlib.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/stdlib.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/stdlib.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef int wchar_t; #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 34 "/usr/include/stdlib.h" #line 95 "/usr/include/stdlib.h" typedef struct { int quot; int rem; } div_t; typedef struct { long int quot; long int rem; } ldiv_t; typedef struct { long long int quot; long long int rem; } lldiv_t; extern size_t __ctype_get_mb_cur_max (void) ; extern double atof (const char *__nptr) ; extern int atoi (const char *__nptr) ; extern long int atol (const char *__nptr) ; extern long long int atoll (const char *__nptr) ; extern double strtod (const char * __nptr, char ** __endptr) ; extern float strtof (const char * __nptr, char ** __endptr) ; extern long double strtold (const char * __nptr, char ** __endptr) ; extern long int strtol (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long int strtoul (const char * __nptr, char ** __endptr, int __base) ; extern long long int strtoq (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long long int strtouq (const char * __nptr, char ** __endptr, int __base) ; extern long long int strtoll (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long long int strtoull (const char * __nptr, char ** __endptr, int __base) ; #line 274 "/usr/include/stdlib.h" #line 305 "/usr/include/stdlib.h" extern char *l64a (long int __n) ; extern long int a64l (const char *__s) ; #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; typedef char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 321 "/usr/include/stdlib.h" extern long int random (void) ; extern void srandom (unsigned int __seed) ; extern char *initstate (unsigned int __seed, char *__statebuf, size_t __statelen) ; extern char *setstate (char *__statebuf) ; struct random_data { int32_t *fptr; int32_t *rptr; int32_t *state; int rand_type; int rand_deg; int rand_sep; int32_t *end_ptr; }; extern int random_r (struct random_data * __buf, int32_t * __result) ; extern int srandom_r (unsigned int __seed, struct random_data *__buf) ; extern int initstate_r (unsigned int __seed, char * __statebuf, size_t __statelen, struct random_data * __buf) ; extern int setstate_r (char * __statebuf, struct random_data * __buf) ; extern int rand (void) ; extern void srand (unsigned int __seed) ; extern int rand_r (unsigned int *__seed) ; extern double drand48 (void) ; extern double erand48 (unsigned short int __xsubi[3]) ; extern long int lrand48 (void) ; extern long int nrand48 (unsigned short int __xsubi[3]) ; extern long int mrand48 (void) ; extern long int jrand48 (unsigned short int __xsubi[3]) ; extern void srand48 (long int __seedval) ; extern unsigned short int *seed48 (unsigned short int __seed16v[3]) ; extern void lcong48 (unsigned short int __param[7]) ; struct drand48_data { unsigned short int __x[3]; unsigned short int __old_x[3]; unsigned short int __c; unsigned short int __init; unsigned long long int __a; }; extern int drand48_r (struct drand48_data * __buffer, double * __result) ; extern int erand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, double * __result) ; extern int lrand48_r (struct drand48_data * __buffer, long int * __result) ; extern int nrand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, long int * __result) ; extern int mrand48_r (struct drand48_data * __buffer, long int * __result) ; extern int jrand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, long int * __result) ; extern int srand48_r (long int __seedval, struct drand48_data *__buffer) ; extern int seed48_r (unsigned short int __seed16v[3], struct drand48_data *__buffer) ; extern int lcong48_r (unsigned short int __param[7], struct drand48_data *__buffer) ; extern void *malloc (size_t __size) ; extern void *calloc (size_t __nmemb, size_t __size) ; extern void *realloc (void *__ptr, size_t __size) ; extern void free (void *__ptr) ; extern void cfree (void *__ptr) ; #line 1 "/usr/include/alloca.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/alloca.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 26 "/usr/include/alloca.h" extern void *alloca (size_t __size) ; #line 498 "/usr/include/stdlib.h" extern void *valloc (size_t __size) ; extern int posix_memalign (void **__memptr, size_t __alignment, size_t __size) ; extern void abort (void) ; extern int atexit (void (*__func) (void)) ; extern int on_exit (void (*__func) (int __status, void *__arg), void *__arg) ; extern void exit (int __status) ; extern void _Exit (int __status) ; extern char *getenv (const char *__name) ; extern char *__secure_getenv (const char *__name) ; extern int putenv (char *__string) ; extern int setenv (const char *__name, const char *__value, int __replace) ; extern int unsetenv (const char *__name) ; extern int clearenv (void) ; extern char *mktemp (char *__template) ; extern int mkstemp (char *__template) ; #line 607 "/usr/include/stdlib.h" extern char *mkdtemp (char *__template) ; #line 638 "/usr/include/stdlib.h" extern int system (const char *__command) ; #line 655 "/usr/include/stdlib.h" extern char *realpath (const char * __name, char * __resolved) ; typedef int (*__compar_fn_t) (const void *, const void *); extern void *bsearch (const void *__key, const void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; extern void qsort (void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; extern int abs (int __x) ; extern long int labs (long int __x) ; extern long long int llabs (long long int __x) ; extern div_t div (int __numer, int __denom) ; extern ldiv_t ldiv (long int __numer, long int __denom) ; extern lldiv_t lldiv (long long int __numer, long long int __denom) ; extern char *ecvt (double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *fcvt (double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *gcvt (double __value, int __ndigit, char *__buf) ; extern char *qecvt (long double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *qfcvt (long double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *qgcvt (long double __value, int __ndigit, char *__buf) ; extern int ecvt_r (double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int fcvt_r (double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int qecvt_r (long double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int qfcvt_r (long double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int mblen (const char *__s, size_t __n) ; extern int mbtowc (wchar_t * __pwc, const char * __s, size_t __n) ; extern int wctomb (char *__s, wchar_t __wchar) ; extern size_t mbstowcs (wchar_t * __pwcs, const char * __s, size_t __n) ; extern size_t wcstombs (char * __s, const wchar_t * __pwcs, size_t __n) ; extern int rpmatch (const char *__response) ; #line 820 "/usr/include/stdlib.h" extern int posix_openpt (int __oflag) ; #line 851 "/usr/include/stdlib.h" #line 862 "/usr/include/stdlib.h" extern int getloadavg (double __loadavg[], int __nelem) ; #line 879 "/usr/include/stdlib.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_STDLIB_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: pthread.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/pthread.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 24 "/usr/include/pthread.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 25 "/usr/include/pthread.h" #line 1 "/usr/include/sched.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 24 "/usr/include/sched.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 27 "/usr/include/sched.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 30 "/usr/include/sched.h" #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 33 "/usr/include/sched.h" #line 1 "/usr/include/bits/sched.h" #line 36 "/usr/include/bits/sched.h" #line 64 "/usr/include/bits/sched.h" struct sched_param { int __sched_priority; }; extern int clone (int (*__fn) (void *__arg), void *__child_stack, int __flags, void *__arg, ...) ; extern int unshare (int __flags) ; extern int sched_getcpu (void) ; struct __sched_param { int __sched_priority; }; typedef unsigned long int __cpu_mask; typedef struct { __cpu_mask __bits[1024 / (8 * sizeof (__cpu_mask))]; } cpu_set_t; #line 146 "/usr/include/bits/sched.h" #line 164 "/usr/include/bits/sched.h" #line 174 "/usr/include/bits/sched.h" extern int __sched_cpucount (size_t __setsize, const cpu_set_t *__setp) ; extern cpu_set_t *__sched_cpualloc (size_t __count) ; extern void __sched_cpufree (cpu_set_t *__set) ; #line 36 "/usr/include/sched.h" extern int sched_setparam (__pid_t __pid, const struct sched_param *__param) ; extern int sched_getparam (__pid_t __pid, struct sched_param *__param) ; extern int sched_setscheduler (__pid_t __pid, int __policy, const struct sched_param *__param) ; extern int sched_getscheduler (__pid_t __pid) ; extern int sched_yield (void) ; extern int sched_get_priority_max (int __algorithm) ; extern int sched_get_priority_min (int __algorithm) ; extern int sched_rr_get_interval (__pid_t __pid, struct timespec *__t) ; #line 117 "/usr/include/sched.h" #line 26 "/usr/include/pthread.h" #line 1 "/usr/include/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 30 "/usr/include/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 40 "/usr/include/time.h" #line 1 "/usr/include/bits/time.h" #line 43 "/usr/include/bits/time.h" #line 44 "/usr/include/time.h" typedef __clock_t clock_t; typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" struct tm { int tm_sec; int tm_min; int tm_hour; int tm_mday; int tm_mon; int tm_year; int tm_wday; int tm_yday; int tm_isdst; long int tm_gmtoff; const char *tm_zone; }; struct itimerspec { struct timespec it_interval; struct timespec it_value; }; struct sigevent; typedef __pid_t pid_t; extern clock_t clock (void) ; extern time_t time (time_t *__timer) ; extern double difftime (time_t __time1, time_t __time0) ; extern time_t mktime (struct tm *__tp) ; extern size_t strftime (char * __s, size_t __maxsize, const char * __format, const struct tm * __tp) ; #line 212 "/usr/include/time.h" #line 227 "/usr/include/time.h" extern struct tm *gmtime (const time_t *__timer) ; extern struct tm *localtime (const time_t *__timer) ; extern struct tm *gmtime_r (const time_t * __timer, struct tm * __tp) ; extern struct tm *localtime_r (const time_t * __timer, struct tm * __tp) ; extern char *asctime (const struct tm *__tp) ; extern char *ctime (const time_t *__timer) ; extern char *asctime_r (const struct tm * __tp, char * __buf) ; extern char *ctime_r (const time_t * __timer, char * __buf) ; extern char *__tzname[2]; extern int __daylight; extern long int __timezone; extern char *tzname[2]; extern void tzset (void) ; extern int daylight; extern long int timezone; extern int stime (const time_t *__when) ; extern time_t timegm (struct tm *__tp) ; extern time_t timelocal (struct tm *__tp) ; extern int dysize (int __year) ; extern int nanosleep (const struct timespec *__requested_time, struct timespec *__remaining); extern int clock_getres (clockid_t __clock_id, struct timespec *__res) ; extern int clock_gettime (clockid_t __clock_id, struct timespec *__tp) ; extern int clock_settime (clockid_t __clock_id, const struct timespec *__tp) ; extern int clock_nanosleep (clockid_t __clock_id, int __flags, const struct timespec *__req, struct timespec *__rem); extern int clock_getcpuclockid (pid_t __pid, clockid_t *__clock_id) ; extern int timer_create (clockid_t __clock_id, struct sigevent * __evp, timer_t * __timerid) ; extern int timer_delete (timer_t __timerid) ; extern int timer_settime (timer_t __timerid, int __flags, const struct itimerspec * __value, struct itimerspec * __ovalue) ; extern int timer_gettime (timer_t __timerid, struct itimerspec *__value) ; extern int timer_getoverrun (timer_t __timerid) ; #line 400 "/usr/include/time.h" #line 415 "/usr/include/time.h" #line 27 "/usr/include/pthread.h" #line 1 "/usr/include/signal.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 30 "/usr/include/signal.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 34 "/usr/include/signal.h" #line 46 "/usr/include/signal.h" typedef __sigset_t sigset_t; #line 401 "/usr/include/signal.h" #line 30 "/usr/include/pthread.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 31 "/usr/include/pthread.h" #line 1 "/usr/include/bits/setjmp.h" #line 1 "/usr/include/bits/wordsize.h" #line 28 "/usr/include/bits/setjmp.h" typedef struct __sparc64_jmp_buf { struct __sparc64_jmp_buf *uc_link; unsigned long uc_flags; unsigned long uc_sigmask; struct __sparc64_jmp_buf_mcontext { unsigned long mc_gregs[53]; unsigned long mc_fp; unsigned long mc_i7; struct __sparc64_jmp_buf_fpu { union { unsigned int sregs[512]; unsigned long dregs[256]; long double qregs[128]; } mcfpu_fpregs; unsigned long mcfpu_fsr; unsigned long mcfpu_fprs; unsigned long mcfpu_gsr; unsigned long mcfpu_xasr; void *mcfpu_fq; unsigned char mcfpu_qcnt; unsigned char mcfpu_qentsz; unsigned char mcfpu_enab; } mc_fpregs; } uc_mcontext; } __jmp_buf[1]; #line 70 "/usr/include/bits/setjmp.h" #line 32 "/usr/include/pthread.h" #line 1 "/usr/include/bits/wordsize.h" #line 33 "/usr/include/pthread.h" enum { PTHREAD_CREATE_JOINABLE, PTHREAD_CREATE_DETACHED }; enum { PTHREAD_MUTEX_TIMED_NP, PTHREAD_MUTEX_RECURSIVE_NP, PTHREAD_MUTEX_ERRORCHECK_NP, PTHREAD_MUTEX_ADAPTIVE_NP #line 63 "/usr/include/pthread.h" }; #line 74 "/usr/include/pthread.h" #line 85 "/usr/include/pthread.h" #line 111 "/usr/include/pthread.h" enum { PTHREAD_RWLOCK_PREFER_READER_NP, PTHREAD_RWLOCK_PREFER_WRITER_NP, PTHREAD_RWLOCK_PREFER_WRITER_NONRECURSIVE_NP, PTHREAD_RWLOCK_DEFAULT_NP = PTHREAD_RWLOCK_PREFER_READER_NP }; #line 144 "/usr/include/pthread.h" enum { PTHREAD_INHERIT_SCHED, PTHREAD_EXPLICIT_SCHED }; enum { PTHREAD_SCOPE_SYSTEM, PTHREAD_SCOPE_PROCESS }; enum { PTHREAD_PROCESS_PRIVATE, PTHREAD_PROCESS_SHARED }; struct _pthread_cleanup_buffer { void (*__routine) (void *); void *__arg; int __canceltype; struct _pthread_cleanup_buffer *__prev; }; enum { PTHREAD_CANCEL_ENABLE, PTHREAD_CANCEL_DISABLE }; enum { PTHREAD_CANCEL_DEFERRED, PTHREAD_CANCEL_ASYNCHRONOUS }; extern int pthread_create (pthread_t * __newthread, const pthread_attr_t * __attr, void *(*__start_routine) (void *), void * __arg) ; extern void pthread_exit (void *__retval) ; extern int pthread_join (pthread_t __th, void **__thread_return); #line 258 "/usr/include/pthread.h" extern int pthread_detach (pthread_t __th) ; extern pthread_t pthread_self (void) ; extern int pthread_equal (pthread_t __thread1, pthread_t __thread2) ; extern int pthread_attr_init (pthread_attr_t *__attr) ; extern int pthread_attr_destroy (pthread_attr_t *__attr) ; extern int pthread_attr_getdetachstate (const pthread_attr_t *__attr, int *__detachstate) ; extern int pthread_attr_setdetachstate (pthread_attr_t *__attr, int __detachstate) ; extern int pthread_attr_getguardsize (const pthread_attr_t *__attr, size_t *__guardsize) ; extern int pthread_attr_setguardsize (pthread_attr_t *__attr, size_t __guardsize) ; extern int pthread_attr_getschedparam (const pthread_attr_t * __attr, struct sched_param * __param) ; extern int pthread_attr_setschedparam (pthread_attr_t * __attr, const struct sched_param * __param) ; extern int pthread_attr_getschedpolicy (const pthread_attr_t * __attr, int * __policy) ; extern int pthread_attr_setschedpolicy (pthread_attr_t *__attr, int __policy) ; extern int pthread_attr_getinheritsched (const pthread_attr_t * __attr, int * __inherit) ; extern int pthread_attr_setinheritsched (pthread_attr_t *__attr, int __inherit) ; extern int pthread_attr_getscope (const pthread_attr_t * __attr, int * __scope) ; extern int pthread_attr_setscope (pthread_attr_t *__attr, int __scope) ; extern int pthread_attr_getstackaddr (const pthread_attr_t * __attr, void ** __stackaddr) ; extern int pthread_attr_setstackaddr (pthread_attr_t *__attr, void *__stackaddr) ; extern int pthread_attr_getstacksize (const pthread_attr_t * __attr, size_t * __stacksize) ; extern int pthread_attr_setstacksize (pthread_attr_t *__attr, size_t __stacksize) ; extern int pthread_attr_getstack (const pthread_attr_t * __attr, void ** __stackaddr, size_t * __stacksize) ; extern int pthread_attr_setstack (pthread_attr_t *__attr, void *__stackaddr, size_t __stacksize) ; #line 407 "/usr/include/pthread.h" extern int pthread_setschedparam (pthread_t __target_thread, int __policy, const struct sched_param *__param) ; extern int pthread_getschedparam (pthread_t __target_thread, int * __policy, struct sched_param * __param) ; extern int pthread_setschedprio (pthread_t __target_thread, int __prio) ; #line 435 "/usr/include/pthread.h" #line 455 "/usr/include/pthread.h" extern int pthread_once (pthread_once_t *__once_control, void (*__init_routine) (void)) ; extern int pthread_setcancelstate (int __state, int *__oldstate); extern int pthread_setcanceltype (int __type, int *__oldtype); extern int pthread_cancel (pthread_t __th); extern void pthread_testcancel (void); typedef struct { struct { __jmp_buf __cancel_jmp_buf; int __mask_was_saved; } __cancel_jmp_buf[1]; void *__pad[4]; } __pthread_unwind_buf_t ; struct __pthread_cleanup_frame { void (*__cancel_routine) (void *); void *__cancel_arg; int __do_it; int __cancel_type; }; #line 629 "/usr/include/pthread.h" #line 652 "/usr/include/pthread.h" extern void __pthread_register_cancel (__pthread_unwind_buf_t *__buf) ; #line 663 "/usr/include/pthread.h" extern void __pthread_unregister_cancel (__pthread_unwind_buf_t *__buf) ; #line 701 "/usr/include/pthread.h" extern void __pthread_unwind_next (__pthread_unwind_buf_t *__buf) ; struct __jmp_buf_tag; extern int __sigsetjmp (struct __jmp_buf_tag *__env, int __savemask) ; extern int pthread_mutex_init (pthread_mutex_t *__mutex, const pthread_mutexattr_t *__mutexattr) ; extern int pthread_mutex_destroy (pthread_mutex_t *__mutex) ; extern int pthread_mutex_trylock (pthread_mutex_t *__mutex) ; extern int pthread_mutex_lock (pthread_mutex_t *__mutex) ; extern int pthread_mutex_timedlock (pthread_mutex_t * __mutex, const struct timespec * __abstime) ; extern int pthread_mutex_unlock (pthread_mutex_t *__mutex) ; #line 761 "/usr/include/pthread.h" extern int pthread_mutexattr_init (pthread_mutexattr_t *__attr) ; extern int pthread_mutexattr_destroy (pthread_mutexattr_t *__attr) ; extern int pthread_mutexattr_getpshared (const pthread_mutexattr_t * __attr, int * __pshared) ; extern int pthread_mutexattr_setpshared (pthread_mutexattr_t *__attr, int __pshared) ; #line 827 "/usr/include/pthread.h" #line 839 "/usr/include/pthread.h" extern int pthread_rwlock_init (pthread_rwlock_t * __rwlock, const pthread_rwlockattr_t * __attr) ; extern int pthread_rwlock_destroy (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlock_rdlock (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlock_tryrdlock (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlock_timedrdlock (pthread_rwlock_t * __rwlock, const struct timespec * __abstime) ; extern int pthread_rwlock_wrlock (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlock_trywrlock (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlock_timedwrlock (pthread_rwlock_t * __rwlock, const struct timespec * __abstime) ; extern int pthread_rwlock_unlock (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlockattr_init (pthread_rwlockattr_t *__attr) ; extern int pthread_rwlockattr_destroy (pthread_rwlockattr_t *__attr) ; extern int pthread_rwlockattr_getpshared (const pthread_rwlockattr_t * __attr, int * __pshared) ; extern int pthread_rwlockattr_setpshared (pthread_rwlockattr_t *__attr, int __pshared) ; extern int pthread_rwlockattr_getkind_np (const pthread_rwlockattr_t * __attr, int * __pref) ; extern int pthread_rwlockattr_setkind_np (pthread_rwlockattr_t *__attr, int __pref) ; extern int pthread_cond_init (pthread_cond_t * __cond, const pthread_condattr_t * __cond_attr) ; extern int pthread_cond_destroy (pthread_cond_t *__cond) ; extern int pthread_cond_signal (pthread_cond_t *__cond) ; extern int pthread_cond_broadcast (pthread_cond_t *__cond) ; extern int pthread_cond_wait (pthread_cond_t * __cond, pthread_mutex_t * __mutex) ; extern int pthread_cond_timedwait (pthread_cond_t * __cond, pthread_mutex_t * __mutex, const struct timespec * __abstime) ; extern int pthread_condattr_init (pthread_condattr_t *__attr) ; extern int pthread_condattr_destroy (pthread_condattr_t *__attr) ; extern int pthread_condattr_getpshared (const pthread_condattr_t * __attr, int * __pshared) ; extern int pthread_condattr_setpshared (pthread_condattr_t *__attr, int __pshared) ; extern int pthread_condattr_getclock (const pthread_condattr_t * __attr, __clockid_t * __clock_id) ; extern int pthread_condattr_setclock (pthread_condattr_t *__attr, __clockid_t __clock_id) ; extern int pthread_spin_init (pthread_spinlock_t *__lock, int __pshared) ; extern int pthread_spin_destroy (pthread_spinlock_t *__lock) ; extern int pthread_spin_lock (pthread_spinlock_t *__lock) ; extern int pthread_spin_trylock (pthread_spinlock_t *__lock) ; extern int pthread_spin_unlock (pthread_spinlock_t *__lock) ; extern int pthread_barrier_init (pthread_barrier_t * __barrier, const pthread_barrierattr_t * __attr, unsigned int __count) ; extern int pthread_barrier_destroy (pthread_barrier_t *__barrier) ; extern int pthread_barrier_wait (pthread_barrier_t *__barrier) ; extern int pthread_barrierattr_init (pthread_barrierattr_t *__attr) ; extern int pthread_barrierattr_destroy (pthread_barrierattr_t *__attr) ; extern int pthread_barrierattr_getpshared (const pthread_barrierattr_t * __attr, int * __pshared) ; extern int pthread_barrierattr_setpshared (pthread_barrierattr_t *__attr, int __pshared) ; extern int pthread_key_create (pthread_key_t *__key, void (*__destr_function) (void *)) ; extern int pthread_key_delete (pthread_key_t __key) ; extern void *pthread_getspecific (pthread_key_t __key) ; extern int pthread_setspecific (pthread_key_t __key, const void *__pointer) ; extern int pthread_getcpuclockid (pthread_t __thread_id, __clockid_t *__clock_id) ; extern int pthread_atfork (void (*__prepare) (void), void (*__parent) (void), void (*__child) (void)) ; #line 1116 "/usr/include/pthread.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_PTHREAD_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: setjmp.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/setjmp.h" #line 1 "/usr/include/setjmp.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/setjmp.h" #line 1 "/usr/include/bits/setjmp.h" #line 1 "/usr/include/bits/wordsize.h" #line 28 "/usr/include/bits/setjmp.h" typedef struct __sparc64_jmp_buf { struct __sparc64_jmp_buf *uc_link; unsigned long uc_flags; unsigned long uc_sigmask; struct __sparc64_jmp_buf_mcontext { unsigned long mc_gregs[53]; unsigned long mc_fp; unsigned long mc_i7; struct __sparc64_jmp_buf_fpu { union { unsigned int sregs[512]; unsigned long dregs[256]; long double qregs[128]; } mcfpu_fpregs; unsigned long mcfpu_fsr; unsigned long mcfpu_fprs; unsigned long mcfpu_gsr; unsigned long mcfpu_xasr; void *mcfpu_fq; unsigned char mcfpu_qcnt; unsigned char mcfpu_qentsz; unsigned char mcfpu_enab; } mc_fpregs; } uc_mcontext; } __jmp_buf[1]; #line 70 "/usr/include/bits/setjmp.h" #line 31 "/usr/include/setjmp.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 32 "/usr/include/setjmp.h" struct __jmp_buf_tag { __jmp_buf __jmpbuf; int __mask_was_saved; __sigset_t __saved_mask; }; typedef struct __jmp_buf_tag jmp_buf[1]; extern int setjmp (jmp_buf __env) ; extern int __sigsetjmp (struct __jmp_buf_tag __env[1], int __savemask) ; extern int _setjmp (struct __jmp_buf_tag __env[1]) ; #line 76 "/usr/include/setjmp.h" extern void longjmp (struct __jmp_buf_tag __env[1], int __val) ; extern void _longjmp (struct __jmp_buf_tag __env[1], int __val) ; typedef struct __jmp_buf_tag sigjmp_buf[1]; extern void siglongjmp (sigjmp_buf __env, int __val) ; #line 3 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/setjmp.h" #pragma unknown_control_flow(setjmp) #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(sigsetjmp) #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SETJMP_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/utsname.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/sys/utsname.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/sys/utsname.h" #line 1 "/usr/include/bits/utsname.h" #line 31 "/usr/include/sys/utsname.h" #line 47 "/usr/include/sys/utsname.h" struct utsname { char sysname[65]; char nodename[65]; char release[65]; char version[65]; char machine[65]; char __domainname[65]; }; extern int uname (struct utsname *__name) ; #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_UTSNAME_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: machine/endian.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "machine/endian.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "machine/endian.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "machine/endian.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c".: ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: limits.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 7 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "/usr/include/bits/posix1_lim.h" #line 1 "/usr/include/bits/local_lim.h" #line 34 "/usr/include/bits/local_lim.h" #line 1 "/usr/include/linux/limits.h" #line 17 "/usr/include/linux/limits.h" #line 37 "/usr/include/bits/local_lim.h" #line 154 "/usr/include/bits/posix1_lim.h" #line 62 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "/usr/include/bits/posix2_lim.h" #line 87 "/usr/include/bits/posix2_lim.h" #line 66 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_LIMITS_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: fcntl.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/fcntl.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/fcntl.h" #line 1 "/usr/include/bits/fcntl.h" #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; typedef char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 26 "/usr/include/bits/fcntl.h" #line 1 "/usr/include/bits/wordsize.h" #line 27 "/usr/include/bits/fcntl.h" #line 46 "/usr/include/bits/fcntl.h" #line 54 "/usr/include/bits/fcntl.h" #line 62 "/usr/include/bits/fcntl.h" #line 98 "/usr/include/bits/fcntl.h" #line 111 "/usr/include/bits/fcntl.h" #line 121 "/usr/include/bits/fcntl.h" #line 142 "/usr/include/bits/fcntl.h" #line 149 "/usr/include/bits/fcntl.h" #line 160 "/usr/include/bits/fcntl.h" struct flock { short int l_type; short int l_whence; __off_t l_start; __off_t l_len; __pid_t l_pid; short int __unused; }; #line 187 "/usr/include/bits/fcntl.h" #line 197 "/usr/include/bits/fcntl.h" #line 207 "/usr/include/bits/fcntl.h" #line 229 "/usr/include/bits/fcntl.h" #line 258 "/usr/include/bits/fcntl.h" #line 35 "/usr/include/fcntl.h" #line 51 "/usr/include/fcntl.h" #line 70 "/usr/include/fcntl.h" extern int fcntl (int __fd, int __cmd, ...); extern int open (const char *__file, int __oflag, ...) ; #line 97 "/usr/include/fcntl.h" #line 123 "/usr/include/fcntl.h" extern int creat (const char *__file, __mode_t __mode) ; #line 142 "/usr/include/fcntl.h" extern int lockf (int __fd, int __cmd, __off_t __len); #line 171 "/usr/include/fcntl.h" extern int posix_fadvise (int __fd, __off_t __offset, __off_t __len, int __advise) ; #line 191 "/usr/include/fcntl.h" extern int posix_fallocate (int __fd, __off_t __offset, __off_t __len); #line 212 "/usr/include/fcntl.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_FCNTL_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: string.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/string.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/string.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 34 "/usr/include/string.h" extern void *memcpy (void * __dest, const void * __src, size_t __n) ; extern void *memmove (void *__dest, const void *__src, size_t __n) ; extern void *memccpy (void * __dest, const void * __src, int __c, size_t __n) ; extern void *memset (void *__s, int __c, size_t __n) ; extern int memcmp (const void *__s1, const void *__s2, size_t __n) ; extern void *memchr (const void *__s, int __c, size_t __n) ; #line 80 "/usr/include/string.h" extern char *strcpy (char * __dest, const char * __src) ; extern char *strncpy (char * __dest, const char * __src, size_t __n) ; extern char *strcat (char * __dest, const char * __src) ; extern char *strncat (char * __dest, const char * __src, size_t __n) ; extern int strcmp (const char *__s1, const char *__s2) ; extern int strncmp (const char *__s1, const char *__s2, size_t __n) ; extern int strcoll (const char *__s1, const char *__s2) ; extern size_t strxfrm (char * __dest, const char * __src, size_t __n) ; #line 127 "/usr/include/string.h" extern char *strdup (const char *__s) ; #line 164 "/usr/include/string.h" extern char *strchr (const char *__s, int __c) ; extern char *strrchr (const char *__s, int __c) ; #line 180 "/usr/include/string.h" extern size_t strcspn (const char *__s, const char *__reject) ; extern size_t strspn (const char *__s, const char *__accept) ; extern char *strpbrk (const char *__s, const char *__accept) ; extern char *strstr (const char *__haystack, const char *__needle) ; extern char *strtok (char * __s, const char * __delim) ; extern char *__strtok_r (char * __s, const char * __delim, char ** __save_ptr) ; extern char *strtok_r (char * __s, const char * __delim, char ** __save_ptr) ; #line 238 "/usr/include/string.h" extern size_t strlen (const char *__s) ; #line 252 "/usr/include/string.h" extern char *strerror (int __errnum) ; extern int __xpg_strerror_r (int __errnum, char *__buf, size_t __buflen) ; #line 285 "/usr/include/string.h" extern void __bzero (void *__s, size_t __n) ; extern void bcopy (const void *__src, void *__dest, size_t __n) ; extern void bzero (void *__s, size_t __n) ; extern int bcmp (const void *__s1, const void *__s2, size_t __n) ; extern char *index (const char *__s, int __c) ; extern char *rindex (const char *__s, int __c) ; extern int ffs (int __i) ; #line 329 "/usr/include/string.h" extern int strcasecmp (const char *__s1, const char *__s2) ; extern int strncasecmp (const char *__s1, const char *__s2, size_t __n) ; #line 350 "/usr/include/string.h" extern char *strsep (char ** __stringp, const char * __delim) ; #line 396 "/usr/include/string.h" #line 431 "/usr/include/string.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_STRING_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/times.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/sys/times.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/sys/times.h" #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 58 "/usr/include/time.h" typedef __clock_t clock_t; #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 30 "/usr/include/sys/times.h" struct tms { clock_t tms_utime; clock_t tms_stime; clock_t tms_cutime; clock_t tms_cstime; }; extern clock_t times (struct tms *__buffer) ; #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_TIMES_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: io.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "io.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "io.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "io.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c".: ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: stdint.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/stdint.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/stdint.h" #line 1 "/usr/include/bits/wchar.h" #line 28 "/usr/include/stdint.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/stdint.h" typedef signed char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char uint8_t; typedef unsigned short int uint16_t; typedef unsigned int uint32_t; typedef unsigned long int uint64_t; typedef signed char int_least8_t; typedef short int int_least16_t; typedef int int_least32_t; typedef long int int_least64_t; typedef unsigned char uint_least8_t; typedef unsigned short int uint_least16_t; typedef unsigned int uint_least32_t; typedef unsigned long int uint_least64_t; typedef signed char int_fast8_t; typedef long int int_fast16_t; typedef long int int_fast32_t; typedef long int int_fast64_t; #line 102 "/usr/include/stdint.h" typedef unsigned char uint_fast8_t; typedef unsigned long int uint_fast16_t; typedef unsigned long int uint_fast32_t; typedef unsigned long int uint_fast64_t; #line 115 "/usr/include/stdint.h" typedef long int intptr_t; typedef unsigned long int uintptr_t; #line 131 "/usr/include/stdint.h" typedef long int intmax_t; typedef unsigned long int uintmax_t; #line 143 "/usr/include/stdint.h" #line 156 "/usr/include/stdint.h" #line 205 "/usr/include/stdint.h" #line 215 "/usr/include/stdint.h" #line 226 "/usr/include/stdint.h" #line 238 "/usr/include/stdint.h" #line 259 "/usr/include/stdint.h" #line 298 "/usr/include/stdint.h" #line 308 "/usr/include/stdint.h" #line 317 "/usr/include/stdint.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_STDINT_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: pwd.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/pwd.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/pwd.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 31 "/usr/include/pwd.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 34 "/usr/include/pwd.h" typedef __gid_t gid_t; typedef __uid_t uid_t; struct passwd { char *pw_name; char *pw_passwd; __uid_t pw_uid; __gid_t pw_gid; char *pw_gecos; char *pw_dir; char *pw_shell; }; #line 1 "/usr/include/stdio.h" #line 40 "/usr/include/stdio.h" struct _IO_FILE; typedef struct _IO_FILE FILE; #line 70 "/usr/include/stdio.h" #line 917 "/usr/include/stdio.h" #line 65 "/usr/include/pwd.h" extern void setpwent (void); extern void endpwent (void); extern struct passwd *getpwent (void); extern struct passwd *fgetpwent (FILE *__stream); extern int putpwent (const struct passwd * __p, FILE * __f); extern struct passwd *getpwuid (__uid_t __uid); extern struct passwd *getpwnam (const char *__name); extern int getpwent_r (struct passwd * __resultbuf, char * __buffer, size_t __buflen, struct passwd ** __result); extern int getpwuid_r (__uid_t __uid, struct passwd * __resultbuf, char * __buffer, size_t __buflen, struct passwd ** __result); extern int getpwnam_r (const char * __name, struct passwd * __resultbuf, char * __buffer, size_t __buflen, struct passwd ** __result); extern int fgetpwent_r (FILE * __stream, struct passwd * __resultbuf, char * __buffer, size_t __buflen, struct passwd ** __result); #line 183 "/usr/include/pwd.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_PWD_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: float.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/float.h" #line 65 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/float.h" #line 80 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/float.h" #line 91 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/float.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_FLOAT_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/param.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/sys/param.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 7 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "/usr/include/bits/posix1_lim.h" #line 1 "/usr/include/bits/local_lim.h" #line 34 "/usr/include/bits/local_lim.h" #line 1 "/usr/include/linux/limits.h" #line 17 "/usr/include/linux/limits.h" #line 37 "/usr/include/bits/local_lim.h" #line 154 "/usr/include/bits/posix1_lim.h" #line 62 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "/usr/include/bits/posix2_lim.h" #line 87 "/usr/include/bits/posix2_lim.h" #line 66 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 23 "/usr/include/sys/param.h" #line 1 "/usr/include/linux/param.h" #line 1 "/usr/include/asm/param.h" #line 1 "/usr/include/asm-s64fx/param.h" #line 6 "/usr/include/asm/param.h" #line 5 "/usr/include/linux/param.h" #line 25 "/usr/include/sys/param.h" #line 36 "/usr/include/sys/param.h" #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; typedef char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 43 "/usr/include/sys/param.h" #line 62 "/usr/include/sys/param.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_PARAM_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: netdb.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/netdb.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/netdb.h" #line 1 "/usr/include/netinet/in.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 24 "/usr/include/netinet/in.h" #line 1 "/usr/include/stdint.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/stdint.h" #line 1 "/usr/include/bits/wchar.h" #line 28 "/usr/include/stdint.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/stdint.h" typedef signed char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char uint8_t; typedef unsigned short int uint16_t; typedef unsigned int uint32_t; typedef unsigned long int uint64_t; typedef signed char int_least8_t; typedef short int int_least16_t; typedef int int_least32_t; typedef long int int_least64_t; typedef unsigned char uint_least8_t; typedef unsigned short int uint_least16_t; typedef unsigned int uint_least32_t; typedef unsigned long int uint_least64_t; typedef signed char int_fast8_t; typedef long int int_fast16_t; typedef long int int_fast32_t; typedef long int int_fast64_t; #line 102 "/usr/include/stdint.h" typedef unsigned char uint_fast8_t; typedef unsigned long int uint_fast16_t; typedef unsigned long int uint_fast32_t; typedef unsigned long int uint_fast64_t; #line 115 "/usr/include/stdint.h" typedef long int intptr_t; typedef unsigned long int uintptr_t; #line 131 "/usr/include/stdint.h" typedef long int intmax_t; typedef unsigned long int uintmax_t; #line 143 "/usr/include/stdint.h" #line 156 "/usr/include/stdint.h" #line 205 "/usr/include/stdint.h" #line 215 "/usr/include/stdint.h" #line 226 "/usr/include/stdint.h" #line 238 "/usr/include/stdint.h" #line 259 "/usr/include/stdint.h" #line 298 "/usr/include/stdint.h" #line 308 "/usr/include/stdint.h" #line 317 "/usr/include/stdint.h" #line 25 "/usr/include/netinet/in.h" #line 1 "/usr/include/sys/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/socket.h" #line 1 "/usr/include/sys/uio.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/sys/uio.h" #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; #line 172 "/usr/include/sys/types.h" typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 25 "/usr/include/sys/uio.h" #line 1 "/usr/include/bits/uio.h" struct iovec { void *iov_base; size_t iov_len; }; #line 30 "/usr/include/sys/uio.h" extern ssize_t readv (int __fd, const struct iovec *__iovec, int __count); extern ssize_t writev (int __fd, const struct iovec *__iovec, int __count); #line 29 "/usr/include/sys/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 31 "/usr/include/sys/socket.h" #line 1 "/usr/include/bits/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 31 "/usr/include/bits/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 7 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "/usr/include/bits/posix1_lim.h" #line 1 "/usr/include/bits/local_lim.h" #line 34 "/usr/include/bits/local_lim.h" #line 1 "/usr/include/linux/limits.h" #line 17 "/usr/include/linux/limits.h" #line 37 "/usr/include/bits/local_lim.h" #line 154 "/usr/include/bits/posix1_lim.h" #line 62 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "/usr/include/bits/posix2_lim.h" #line 87 "/usr/include/bits/posix2_lim.h" #line 66 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 33 "/usr/include/bits/socket.h" typedef __socklen_t socklen_t; enum __socket_type { SOCK_STREAM = 1, SOCK_DGRAM = 2, SOCK_RAW = 3, SOCK_RDM = 4, SOCK_SEQPACKET = 5, SOCK_PACKET = 10 }; #line 96 "/usr/include/bits/socket.h" #line 130 "/usr/include/bits/socket.h" #line 142 "/usr/include/bits/socket.h" #line 1 "/usr/include/bits/sockaddr.h" typedef unsigned short int sa_family_t; #line 148 "/usr/include/bits/socket.h" struct sockaddr { sa_family_t sa_family; char sa_data[14]; }; #line 166 "/usr/include/bits/socket.h" struct sockaddr_storage { sa_family_t ss_family; __uint64_t __ss_align; char __ss_padding[(128 - (2 * sizeof (__uint64_t)))]; }; enum { MSG_OOB = 0x01, MSG_PEEK = 0x02, MSG_DONTROUTE = 0x04, #line 189 "/usr/include/bits/socket.h" MSG_CTRUNC = 0x08, MSG_PROXY = 0x10, MSG_TRUNC = 0x20, MSG_DONTWAIT = 0x40, MSG_EOR = 0x80, MSG_WAITALL = 0x100, MSG_FIN = 0x200, MSG_SYN = 0x400, MSG_CONFIRM = 0x800, MSG_RST = 0x1000, MSG_ERRQUEUE = 0x2000, MSG_NOSIGNAL = 0x4000, MSG_MORE = 0x8000, MSG_CMSG_CLOEXEC = 0x40000000 }; struct msghdr { void *msg_name; socklen_t msg_namelen; struct iovec *msg_iov; size_t msg_iovlen; void *msg_control; size_t msg_controllen; int msg_flags; }; struct cmsghdr { size_t cmsg_len; int cmsg_level; int cmsg_type; unsigned char __cmsg_data []; }; #line 272 "/usr/include/bits/socket.h" extern struct cmsghdr *__cmsg_nxthdr (struct msghdr *__mhdr, struct cmsghdr *__cmsg) ; #line 297 "/usr/include/bits/socket.h" enum { SCM_RIGHTS = 0x01 , SCM_CREDENTIALS = 0x02 }; struct ucred { pid_t pid; uid_t uid; gid_t gid; }; #line 1 "/usr/include/asm/socket.h" #line 1 "/usr/include/asm-s64fx/socket.h" #line 1 "/usr/include/asm/sockios.h" #line 1 "/usr/include/asm-s64fx/sockios.h" #line 12 "/usr/include/asm-s64fx/sockios.h" #line 6 "/usr/include/asm/sockios.h" #line 6 "/usr/include/asm-s64fx/socket.h" #line 19 "/usr/include/asm-s64fx/socket.h" #line 26 "/usr/include/asm-s64fx/socket.h" #line 36 "/usr/include/asm-s64fx/socket.h" #line 6 "/usr/include/asm/socket.h" #line 321 "/usr/include/bits/socket.h" struct linger { int l_onoff; int l_linger; }; #line 37 "/usr/include/sys/socket.h" struct osockaddr { unsigned short int sa_family; unsigned char sa_data[14]; }; enum { SHUT_RD = 0, SHUT_WR, SHUT_RDWR }; #line 96 "/usr/include/sys/socket.h" extern int socket (int __domain, int __type, int __protocol) ; extern int socketpair (int __domain, int __type, int __protocol, int __fds[2]) ; extern int bind (int __fd, const struct sockaddr * __addr, socklen_t __len) ; extern int getsockname (int __fd, struct sockaddr * __addr, socklen_t * __len) ; extern int connect (int __fd, const struct sockaddr * __addr, socklen_t __len); extern int getpeername (int __fd, struct sockaddr * __addr, socklen_t * __len) ; extern ssize_t send (int __fd, const void *__buf, size_t __n, int __flags); extern ssize_t recv (int __fd, void *__buf, size_t __n, int __flags); extern ssize_t sendto (int __fd, const void *__buf, size_t __n, int __flags, const struct sockaddr * __addr, socklen_t __addr_len); extern ssize_t recvfrom (int __fd, void * __buf, size_t __n, int __flags, struct sockaddr * __addr, socklen_t * __addr_len); extern ssize_t sendmsg (int __fd, const struct msghdr *__message, int __flags); extern ssize_t recvmsg (int __fd, struct msghdr *__message, int __flags); extern int getsockopt (int __fd, int __level, int __optname, void * __optval, socklen_t * __optlen) ; extern int setsockopt (int __fd, int __level, int __optname, const void *__optval, socklen_t __optlen) ; extern int listen (int __fd, int __n) ; extern int accept (int __fd, struct sockaddr * __addr, socklen_t * __addr_len); extern int shutdown (int __fd, int __how) ; extern int sockatmark (int __fd) ; extern int isfdtype (int __fd, int __fdtype) ; #line 26 "/usr/include/netinet/in.h" enum { IPPROTO_IP = 0, IPPROTO_HOPOPTS = 0, IPPROTO_ICMP = 1, IPPROTO_IGMP = 2, IPPROTO_IPIP = 4, IPPROTO_TCP = 6, IPPROTO_EGP = 8, IPPROTO_PUP = 12, IPPROTO_UDP = 17, IPPROTO_IDP = 22, IPPROTO_TP = 29, IPPROTO_IPV6 = 41, IPPROTO_ROUTING = 43, IPPROTO_FRAGMENT = 44, IPPROTO_RSVP = 46, IPPROTO_GRE = 47, IPPROTO_ESP = 50, IPPROTO_AH = 51, IPPROTO_ICMPV6 = 58, IPPROTO_NONE = 59, IPPROTO_DSTOPTS = 60, IPPROTO_MTP = 92, IPPROTO_ENCAP = 98, IPPROTO_PIM = 103, IPPROTO_COMP = 108, IPPROTO_SCTP = 132, IPPROTO_RAW = 255, IPPROTO_MAX }; typedef uint16_t in_port_t; enum { IPPORT_ECHO = 7, IPPORT_DISCARD = 9, IPPORT_SYSTAT = 11, IPPORT_DAYTIME = 13, IPPORT_NETSTAT = 15, IPPORT_FTP = 21, IPPORT_TELNET = 23, IPPORT_SMTP = 25, IPPORT_TIMESERVER = 37, IPPORT_NAMESERVER = 42, IPPORT_WHOIS = 43, IPPORT_MTP = 57, IPPORT_TFTP = 69, IPPORT_RJE = 77, IPPORT_FINGER = 79, IPPORT_TTYLINK = 87, IPPORT_SUPDUP = 95, IPPORT_EXECSERVER = 512, IPPORT_LOGINSERVER = 513, IPPORT_CMDSERVER = 514, IPPORT_EFSSERVER = 520, IPPORT_BIFFUDP = 512, IPPORT_WHOSERVER = 513, IPPORT_ROUTESERVER = 520, IPPORT_RESERVED = 1024, IPPORT_USERRESERVED = 5000 }; typedef uint32_t in_addr_t; struct in_addr { in_addr_t s_addr; }; struct in6_addr { union { uint8_t u6_addr8[16]; uint16_t u6_addr16[8]; uint32_t u6_addr32[4]; } in6_u; }; extern const struct in6_addr in6addr_any; extern const struct in6_addr in6addr_loopback; struct sockaddr_in { sa_family_t sin_family; in_port_t sin_port; struct in_addr sin_addr; unsigned char sin_zero[sizeof (struct sockaddr) - (sizeof (unsigned short int)) - sizeof (in_port_t) - sizeof (struct in_addr)]; }; struct sockaddr_in6 { sa_family_t sin6_family; in_port_t sin6_port; uint32_t sin6_flowinfo; struct in6_addr sin6_addr; uint32_t sin6_scope_id; }; struct ip_mreq { struct in_addr imr_multiaddr; struct in_addr imr_interface; }; struct ip_mreq_source { struct in_addr imr_multiaddr; struct in_addr imr_interface; struct in_addr imr_sourceaddr; }; struct ipv6_mreq { struct in6_addr ipv6mr_multiaddr; unsigned int ipv6mr_interface; }; struct group_req { uint32_t gr_interface; struct sockaddr_storage gr_group; }; struct group_source_req { uint32_t gsr_interface; struct sockaddr_storage gsr_group; struct sockaddr_storage gsr_source; }; struct ip_msfilter { struct in_addr imsf_multiaddr; struct in_addr imsf_interface; uint32_t imsf_fmode; uint32_t imsf_numsrc; struct in_addr imsf_slist[1]; }; struct group_filter { uint32_t gf_interface; struct sockaddr_storage gf_group; uint32_t gf_fmode; uint32_t gf_numsrc; struct sockaddr_storage gf_slist[1]; }; #line 1 "/usr/include/bits/in.h" #line 53 "/usr/include/bits/in.h" #line 65 "/usr/include/bits/in.h" struct ip_opts { struct in_addr ip_dst; char ip_opts[40]; }; struct ip_mreqn { struct in_addr imr_multiaddr; struct in_addr imr_address; int imr_ifindex; }; struct in_pktinfo { int ipi_ifindex; struct in_addr ipi_spec_dst; struct in_addr ipi_addr; }; #line 115 "/usr/include/bits/in.h" #line 135 "/usr/include/bits/in.h" #line 147 "/usr/include/bits/in.h" #line 344 "/usr/include/netinet/in.h" extern uint32_t ntohl (uint32_t __netlong) ; extern uint16_t ntohs (uint16_t __netshort) ; extern uint32_t htonl (uint32_t __hostlong) ; extern uint16_t htons (uint16_t __hostshort) ; #line 1 "/usr/include/bits/byteswap.h" static unsigned short int __bswap_16 (unsigned short int __bsx) { return ((((__bsx) >> 8) & 0xffu) | (((__bsx) & 0xffu) << 8)); } static unsigned int __bswap_32 (unsigned int __bsx) { return ((((__bsx) & 0xff000000u) >> 24) | (((__bsx) & 0x00ff0000u) >> 8) | (((__bsx) & 0x0000ff00u) << 8) | (((__bsx) & 0x000000ffu) << 24)); } #line 86 "/usr/include/bits/byteswap.h" #line 364 "/usr/include/netinet/in.h" #line 385 "/usr/include/netinet/in.h" extern int bindresvport (int __sockfd, struct sockaddr_in *__sock_in) ; extern int bindresvport6 (int __sockfd, struct sockaddr_in6 *__sock_in) ; struct in6_pktinfo { struct in6_addr ipi6_addr; unsigned int ipi6_ifindex; }; struct ip6_mtuinfo { struct sockaddr_in6 ip6m_addr; uint32_t ip6m_mtu; }; #line 548 "/usr/include/netinet/in.h" #line 29 "/usr/include/netdb.h" #line 1 "/usr/include/rpc/netdb.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 40 "/usr/include/rpc/netdb.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 43 "/usr/include/rpc/netdb.h" struct rpcent { char *r_name; char **r_aliases; int r_number; }; extern void setrpcent (int __stayopen) ; extern void endrpcent (void) ; extern struct rpcent *getrpcbyname (const char *__name) ; extern struct rpcent *getrpcbynumber (int __number) ; extern struct rpcent *getrpcent (void) ; extern int getrpcbyname_r (const char *__name, struct rpcent *__result_buf, char *__buffer, size_t __buflen, struct rpcent **__result) ; extern int getrpcbynumber_r (int __number, struct rpcent *__result_buf, char *__buffer, size_t __buflen, struct rpcent **__result) ; extern int getrpcent_r (struct rpcent *__result_buf, char *__buffer, size_t __buflen, struct rpcent **__result) ; #line 34 "/usr/include/netdb.h" #line 42 "/usr/include/netdb.h" #line 1 "/usr/include/bits/netdb.h" struct netent { char *n_name; char **n_aliases; int n_addrtype; uint32_t n_net; }; #line 44 "/usr/include/netdb.h" #line 52 "/usr/include/netdb.h" extern int *__h_errno_location (void) ; #line 75 "/usr/include/netdb.h" extern void herror (const char *__str) ; extern const char *hstrerror (int __err_num) ; struct hostent { char *h_name; char **h_aliases; int h_addrtype; int h_length; char **h_addr_list; }; extern void sethostent (int __stay_open); extern void endhostent (void); extern struct hostent *gethostent (void); extern struct hostent *gethostbyaddr (const void *__addr, __socklen_t __len, int __type); extern struct hostent *gethostbyname (const char *__name); extern struct hostent *gethostbyname2 (const char *__name, int __af); extern int gethostent_r (struct hostent * __result_buf, char * __buf, size_t __buflen, struct hostent ** __result, int * __h_errnop); extern int gethostbyaddr_r (const void * __addr, __socklen_t __len, int __type, struct hostent * __result_buf, char * __buf, size_t __buflen, struct hostent ** __result, int * __h_errnop); extern int gethostbyname_r (const char * __name, struct hostent * __result_buf, char * __buf, size_t __buflen, struct hostent ** __result, int * __h_errnop); extern int gethostbyname2_r (const char * __name, int __af, struct hostent * __result_buf, char * __buf, size_t __buflen, struct hostent ** __result, int * __h_errnop); extern void setnetent (int __stay_open); extern void endnetent (void); extern struct netent *getnetent (void); extern struct netent *getnetbyaddr (uint32_t __net, int __type); extern struct netent *getnetbyname (const char *__name); extern int getnetent_r (struct netent * __result_buf, char * __buf, size_t __buflen, struct netent ** __result, int * __h_errnop); extern int getnetbyaddr_r (uint32_t __net, int __type, struct netent * __result_buf, char * __buf, size_t __buflen, struct netent ** __result, int * __h_errnop); extern int getnetbyname_r (const char * __name, struct netent * __result_buf, char * __buf, size_t __buflen, struct netent ** __result, int * __h_errnop); struct servent { char *s_name; char **s_aliases; int s_port; char *s_proto; }; extern void setservent (int __stay_open); extern void endservent (void); extern struct servent *getservent (void); extern struct servent *getservbyname (const char *__name, const char *__proto); extern struct servent *getservbyport (int __port, const char *__proto); extern int getservent_r (struct servent * __result_buf, char * __buf, size_t __buflen, struct servent ** __result); extern int getservbyname_r (const char * __name, const char * __proto, struct servent * __result_buf, char * __buf, size_t __buflen, struct servent ** __result); extern int getservbyport_r (int __port, const char * __proto, struct servent * __result_buf, char * __buf, size_t __buflen, struct servent ** __result); struct protoent { char *p_name; char **p_aliases; int p_proto; }; extern void setprotoent (int __stay_open); extern void endprotoent (void); extern struct protoent *getprotoent (void); extern struct protoent *getprotobyname (const char *__name); extern struct protoent *getprotobynumber (int __proto); extern int getprotoent_r (struct protoent * __result_buf, char * __buf, size_t __buflen, struct protoent ** __result); extern int getprotobyname_r (const char * __name, struct protoent * __result_buf, char * __buf, size_t __buflen, struct protoent ** __result); extern int getprotobynumber_r (int __proto, struct protoent * __result_buf, char * __buf, size_t __buflen, struct protoent ** __result); extern int setnetgrent (const char *__netgroup); extern void endnetgrent (void); extern int getnetgrent (char ** __hostp, char ** __userp, char ** __domainp); extern int innetgr (const char *__netgroup, const char *__host, const char *__user, const char *domain); extern int getnetgrent_r (char ** __hostp, char ** __userp, char ** __domainp, char * __buffer, size_t __buflen); extern int rcmd (char ** __ahost, unsigned short int __rport, const char * __locuser, const char * __remuser, const char * __cmd, int * __fd2p); extern int rcmd_af (char ** __ahost, unsigned short int __rport, const char * __locuser, const char * __remuser, const char * __cmd, int * __fd2p, sa_family_t __af); extern int rexec (char ** __ahost, int __rport, const char * __name, const char * __pass, const char * __cmd, int * __fd2p); extern int rexec_af (char ** __ahost, int __rport, const char * __name, const char * __pass, const char * __cmd, int * __fd2p, sa_family_t __af); extern int ruserok (const char *__rhost, int __suser, const char *__remuser, const char *__locuser); extern int ruserok_af (const char *__rhost, int __suser, const char *__remuser, const char *__locuser, sa_family_t __af); extern int rresvport (int *__alport); extern int rresvport_af (int *__alport, sa_family_t __af); struct addrinfo { int ai_flags; int ai_family; int ai_socktype; int ai_protocol; socklen_t ai_addrlen; struct sockaddr *ai_addr; char *ai_canonname; struct addrinfo *ai_next; }; #line 567 "/usr/include/netdb.h" #line 587 "/usr/include/netdb.h" #line 609 "/usr/include/netdb.h" #line 625 "/usr/include/netdb.h" extern int getaddrinfo (const char * __name, const char * __service, const struct addrinfo * __req, struct addrinfo ** __pai); extern void freeaddrinfo (struct addrinfo *__ai) ; extern const char *gai_strerror (int __ecode) ; extern int getnameinfo (const struct sockaddr * __sa, socklen_t __salen, char * __host, socklen_t __hostlen, char * __serv, socklen_t __servlen, unsigned int __flags); #line 681 "/usr/include/netdb.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_NETDB_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: search.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/search.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 24 "/usr/include/search.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 27 "/usr/include/search.h" #line 42 "/usr/include/search.h" extern void insque (void *__elem, void *__prev) ; extern void remque (void *__elem) ; typedef int (*__compar_fn_t) (const void *, const void *); typedef enum { FIND, ENTER } ACTION; typedef struct entry { char *key; void *data; } ENTRY; struct _ENTRY; extern ENTRY *hsearch (ENTRY __item, ACTION __action) ; extern int hcreate (size_t __nel) ; extern void hdestroy (void) ; #line 114 "/usr/include/search.h" typedef enum { preorder, postorder, endorder, leaf } VISIT; extern void *tsearch (const void *__key, void **__rootp, __compar_fn_t __compar); extern void *tfind (const void *__key, void *const *__rootp, __compar_fn_t __compar); extern void *tdelete (const void * __key, void ** __rootp, __compar_fn_t __compar); typedef void (*__action_fn_t) (const void *__nodep, VISIT __value, int __level); extern void twalk (const void *__root, __action_fn_t __action); #line 163 "/usr/include/search.h" extern void *lfind (const void *__key, const void *__base, size_t *__nmemb, size_t __size, __compar_fn_t __compar); extern void *lsearch (const void *__key, void *__base, size_t *__nmemb, size_t __size, __compar_fn_t __compar); #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SEARCH_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: mathimf.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "mathimf.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "mathimf.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "mathimf.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c".: ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/procfs.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/sys/procfs.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/sys/procfs.h" #line 1 "/usr/include/signal.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 30 "/usr/include/signal.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 100 "/usr/include/bits/sigset.h" extern int __sigismember (const __sigset_t *, int); extern int __sigaddset (__sigset_t *, int); extern int __sigdelset (__sigset_t *, int); #line 124 "/usr/include/bits/sigset.h" #line 34 "/usr/include/signal.h" typedef __sig_atomic_t sig_atomic_t; typedef __sigset_t sigset_t; #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 58 "/usr/include/signal.h" #line 1 "/usr/include/bits/signum.h" #line 52 "/usr/include/bits/signum.h" #line 72 "/usr/include/bits/signum.h" #line 59 "/usr/include/signal.h" typedef __pid_t pid_t; typedef __uid_t uid_t; typedef void (*__sighandler_t) (int); extern __sighandler_t __sysv_signal (int __sig, __sighandler_t __handler) ; extern __sighandler_t signal (int __sig, __sighandler_t __handler) ; #line 104 "/usr/include/signal.h" #line 112 "/usr/include/signal.h" extern int kill (__pid_t __pid, int __sig) ; extern int killpg (__pid_t __pgrp, int __sig) ; extern int raise (int __sig) ; extern __sighandler_t ssignal (int __sig, __sighandler_t __handler) ; extern int gsignal (int __sig) ; extern void psignal (int __sig, const char *__s); extern int __sigpause (int __sig_or_mask, int __is_sig); #line 169 "/usr/include/signal.h" extern int sigblock (int __mask) ; extern int sigsetmask (int __mask) ; extern int siggetmask (void) ; typedef __sighandler_t sig_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 210 "/usr/include/signal.h" #line 1 "/usr/include/bits/siginfo.h" #line 1 "/usr/include/bits/wordsize.h" #line 26 "/usr/include/bits/siginfo.h" typedef union sigval { int sival_int; void *sival_ptr; } sigval_t; #line 50 "/usr/include/bits/siginfo.h" typedef struct siginfo { int si_signo; int si_errno; int si_code; union { int _pad[((128 / sizeof (int)) - 4)]; struct { __pid_t si_pid; __uid_t si_uid; } _kill; struct { int si_tid; int si_overrun; sigval_t si_sigval; } _timer; struct { __pid_t si_pid; __uid_t si_uid; sigval_t si_sigval; } _rt; struct { __pid_t si_pid; __uid_t si_uid; int si_status; __clock_t si_utime; __clock_t si_stime; } _sigchld; struct { void *si_addr; int si_trapno; } _sigfault; struct { int si_band; int si_fd; } _sigpoll; } _sifields; } siginfo_t; #line 127 "/usr/include/bits/siginfo.h" enum { SI_ASYNCNL = -60, SI_TKILL = -6, SI_SIGIO, SI_ASYNCIO, SI_MESGQ, SI_TIMER, SI_QUEUE, SI_USER, SI_KERNEL = 0x80 }; enum { ILL_ILLOPC = 1, ILL_ILLOPN, ILL_ILLADR, ILL_ILLTRP, ILL_PRVOPC, ILL_PRVREG, ILL_COPROC, ILL_BADSTK }; enum { FPE_INTDIV = 1, FPE_INTOVF, FPE_FLTDIV, FPE_FLTOVF, FPE_FLTUND, FPE_FLTRES, FPE_FLTINV, FPE_FLTSUB }; enum { SEGV_MAPERR = 1, SEGV_ACCERR }; enum { BUS_ADRALN = 1, BUS_ADRERR, BUS_OBJERR }; enum { TRAP_BRKPT = 1, TRAP_TRACE }; enum { CLD_EXITED = 1, CLD_KILLED, CLD_DUMPED, CLD_TRAPPED, CLD_STOPPED, CLD_CONTINUED }; enum { POLL_IN = 1, POLL_OUT, POLL_MSG, POLL_ERR, POLL_PRI, POLL_HUP }; enum { EMT_TAGOVF = 1 }; #line 281 "/usr/include/bits/siginfo.h" typedef struct sigevent { sigval_t sigev_value; int sigev_signo; int sigev_notify; union { int _pad[((64 / sizeof (int)) - 4)]; struct { void (*_function) (sigval_t); void *_attribute; } _sigev_thread; } _sigev_un; } sigevent_t; enum { SIGEV_SIGNAL = 0, SIGEV_NONE, SIGEV_THREAD, SIGEV_THREAD_ID = 4 }; #line 213 "/usr/include/signal.h" extern int sigemptyset (sigset_t *__set) ; extern int sigfillset (sigset_t *__set) ; extern int sigaddset (sigset_t *__set, int __signo) ; extern int sigdelset (sigset_t *__set, int __signo) ; extern int sigismember (const sigset_t *__set, int __signo) ; #line 243 "/usr/include/signal.h" #line 1 "/usr/include/bits/sigaction.h" struct sigaction { union { __sighandler_t sa_handler; void (*sa_sigaction) (int, siginfo_t *, void *); } __sigaction_handler; __sigset_t sa_mask; unsigned long sa_flags; void (*sa_restorer) (void); }; #line 66 "/usr/include/bits/sigaction.h" #line 247 "/usr/include/signal.h" extern int sigprocmask (int __how, const sigset_t * __set, sigset_t * __oset) ; extern int sigsuspend (const sigset_t *__set) ; extern int sigaction (int __sig, const struct sigaction * __act, struct sigaction * __oact) ; extern int sigpending (sigset_t *__set) ; extern int sigwait (const sigset_t * __set, int * __sig) ; extern int sigwaitinfo (const sigset_t * __set, siginfo_t * __info) ; extern int sigtimedwait (const sigset_t * __set, siginfo_t * __info, const struct timespec * __timeout) ; extern int sigqueue (__pid_t __pid, int __sig, const union sigval __val) ; extern const char *const _sys_siglist[65]; extern const char *const sys_siglist[65]; struct sigvec { __sighandler_t sv_handler; int sv_mask; int sv_flags; }; extern int sigvec (int __sig, const struct sigvec *__vec, struct sigvec *__ovec) ; #line 1 "/usr/include/bits/sigcontext.h" #line 1 "/usr/include/bits/wordsize.h" #line 24 "/usr/include/bits/sigcontext.h" #line 1 "/usr/include/stdint.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/stdint.h" #line 1 "/usr/include/bits/wchar.h" #line 28 "/usr/include/stdint.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/stdint.h" typedef signed char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char uint8_t; typedef unsigned short int uint16_t; typedef unsigned int uint32_t; typedef unsigned long int uint64_t; typedef signed char int_least8_t; typedef short int int_least16_t; typedef int int_least32_t; typedef long int int_least64_t; typedef unsigned char uint_least8_t; typedef unsigned short int uint_least16_t; typedef unsigned int uint_least32_t; typedef unsigned long int uint_least64_t; typedef signed char int_fast8_t; typedef long int int_fast16_t; typedef long int int_fast32_t; typedef long int int_fast64_t; #line 102 "/usr/include/stdint.h" typedef unsigned char uint_fast8_t; typedef unsigned long int uint_fast16_t; typedef unsigned long int uint_fast32_t; typedef unsigned long int uint_fast64_t; #line 115 "/usr/include/stdint.h" typedef long int intptr_t; typedef unsigned long int uintptr_t; #line 131 "/usr/include/stdint.h" typedef long int intmax_t; typedef unsigned long int uintmax_t; #line 143 "/usr/include/stdint.h" #line 156 "/usr/include/stdint.h" #line 205 "/usr/include/stdint.h" #line 215 "/usr/include/stdint.h" #line 226 "/usr/include/stdint.h" #line 238 "/usr/include/stdint.h" #line 259 "/usr/include/stdint.h" #line 298 "/usr/include/stdint.h" #line 308 "/usr/include/stdint.h" #line 317 "/usr/include/stdint.h" #line 25 "/usr/include/bits/sigcontext.h" #line 48 "/usr/include/bits/sigcontext.h" typedef struct { unsigned int si_float_regs [64]; unsigned long si_fsr; unsigned long si_gsr; unsigned long si_fprs; uint64_t si_xglob_regs[32]; uint32_t si_xfloat_regs[448]; uint64_t si_xasr; } __siginfo_fpu_t; struct sigcontext { char sigc_info[128]; struct { unsigned long u_regs[16]; unsigned long tstate; unsigned long tpc; unsigned long tnpc; unsigned int y; unsigned int fprs; } sigc_regs; __siginfo_fpu_t * sigc_fpu_save; uint64_t si_txar; uint64_t si_sccr; struct { void * ss_sp; int ss_flags; unsigned long ss_size; } sigc_stack; unsigned long sigc_mask; }; #line 334 "/usr/include/signal.h" extern int sigreturn (struct sigcontext *__scp) ; #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 344 "/usr/include/signal.h" extern int siginterrupt (int __sig, int __interrupt) ; #line 1 "/usr/include/bits/sigstack.h" struct sigstack { void *ss_sp; int ss_onstack; }; enum { SS_ONSTACK = 1, SS_DISABLE }; typedef struct sigaltstack { void *ss_sp; int ss_flags; size_t ss_size; } stack_t; #line 351 "/usr/include/signal.h" extern int sigstack (struct sigstack *__ss, struct sigstack *__oss) ; extern int sigaltstack (const struct sigaltstack * __ss, struct sigaltstack * __oss) ; #line 384 "/usr/include/signal.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 389 "/usr/include/signal.h" #line 1 "/usr/include/bits/sigthread.h" extern int pthread_sigmask (int __how, const __sigset_t * __newmask, __sigset_t * __oldmask); extern int pthread_kill (pthread_t __threadid, int __signo) ; #line 390 "/usr/include/signal.h" extern int __libc_current_sigrtmin (void) ; extern int __libc_current_sigrtmax (void) ; #line 28 "/usr/include/sys/procfs.h" #line 1 "/usr/include/sys/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 24 "/usr/include/sys/time.h" #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 28 "/usr/include/sys/time.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 30 "/usr/include/sys/time.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" #line 35 "/usr/include/bits/sigset.h" #line 35 "/usr/include/sys/select.h" #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 32 "/usr/include/sys/time.h" #line 52 "/usr/include/sys/time.h" struct timezone { int tz_minuteswest; int tz_dsttime; }; typedef struct timezone * __timezone_ptr_t; extern int gettimeofday (struct timeval * __tv, __timezone_ptr_t __tz) ; extern int settimeofday (const struct timeval *__tv, const struct timezone *__tz) ; extern int adjtime (const struct timeval *__delta, struct timeval *__olddelta) ; enum __itimer_which { ITIMER_REAL = 0, ITIMER_VIRTUAL = 1, ITIMER_PROF = 2 }; struct itimerval { struct timeval it_interval; struct timeval it_value; }; typedef int __itimer_which_t; extern int getitimer (__itimer_which_t __which, struct itimerval *__value) ; extern int setitimer (__itimer_which_t __which, const struct itimerval * __new, struct itimerval * __old) ; extern int utimes (const char *__file, const struct timeval __tvp[2]) ; extern int lutimes (const char *__file, const struct timeval __tvp[2]) ; extern int futimes (int __fd, const struct timeval __tvp[2]) ; #line 159 "/usr/include/sys/time.h" #line 190 "/usr/include/sys/time.h" #line 29 "/usr/include/sys/procfs.h" #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; #line 172 "/usr/include/sys/types.h" typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 30 "/usr/include/sys/procfs.h" #line 1 "/usr/include/sys/ucontext.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/sys/ucontext.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/sys/ucontext.h" #line 82 "/usr/include/sys/ucontext.h" typedef unsigned long mc_greg_t; typedef mc_greg_t mc_gregset_t[53]; struct mc_fq { unsigned long *mcfq_addr; unsigned int mcfq_insn; }; struct mc_fpu { union { unsigned int sregs[512]; unsigned long dregs[256]; long double qregs[128]; } mcfpu_fregs; unsigned long mcfpu_fsr; unsigned long mcfpu_fprs; unsigned long mcfpu_gsr; unsigned long mcfpu_xasr; struct mc_fq *mcfpu_fq; unsigned char mcfpu_qcnt; unsigned char mcfpu_qentsz; unsigned char mcfpu_enab; unsigned char pad[5]; }; typedef struct mc_fpu mc_fpu_t; typedef struct { mc_gregset_t mc_gregs; mc_greg_t mc_fp; mc_greg_t mc_i7; mc_fpu_t mc_fpregs; } mcontext_t; typedef struct ucontext { struct ucontext *uc_link; unsigned long uc_flags; unsigned long __uc_sigmask; mcontext_t uc_mcontext; stack_t uc_stack; __sigset_t uc_sigmask; } ucontext_t; #line 186 "/usr/include/sys/ucontext.h" typedef long greg_t; #line 211 "/usr/include/sys/ucontext.h" typedef greg_t gregset_t[21]; struct rwindow { greg_t rw_local[8]; greg_t rw_in[8]; }; typedef struct gwindows { int wbcnt; int *spbuf[31]; struct rwindow wbuf[31]; } gwindows_t; struct fpq { unsigned long *fpq_addr; unsigned long fpq_instr; }; struct fq { union { double whole; struct fpq fpq; } FQu; }; typedef struct fpu { union { unsigned fpu_regs[512]; double fpu_dregs[256]; long double fpu_qregs[128]; } fpu_fr; struct fq *fpu_q; unsigned long fpu_fsr; unsigned char fpu_qcnt; unsigned char fpu_q_entrysize; unsigned char fpu_en; unsigned long fpu_xasr; } fpregset_t; #line 31 "/usr/include/sys/procfs.h" #line 1 "/usr/include/sys/user.h" struct sunos_regs { unsigned int psr, pc, npc, y; unsigned int regs[15]; }; struct sunos_fpqueue { unsigned int *addr; unsigned int inst; }; struct sunos_fp { union { unsigned int regs[32]; double reg_dbls[16]; } fregs; unsigned int fsr; unsigned int flags; unsigned int extra; unsigned int fpq_count; struct sunos_fpqueue fpq[16]; }; struct sunos_fpu { struct sunos_fp fpstatus; }; struct user { unsigned int magic; unsigned int len; struct sunos_regs regs; struct { unsigned char a_dynamic :1; unsigned char a_toolversion :7; unsigned char a_machtype; unsigned short a_info; unsigned int a_text; unsigned int a_data; unsigned int a_bss; unsigned int a_syms; unsigned int a_entry; unsigned int a_trsize; unsigned int a_drsize; } uexec; int signal; size_t u_tsize; size_t u_dsize; size_t u_ssize; char u_comm[17]; struct sunos_fpu fpu; unsigned int sigcode; }; #line 32 "/usr/include/sys/procfs.h" #line 1 "/usr/include/bits/wordsize.h" #line 33 "/usr/include/sys/procfs.h" typedef struct { unsigned long pr_regs[32]; unsigned long pr_fsr; unsigned long pr_gsr; unsigned long pr_fprs; } elf_fpregset_t; #line 68 "/usr/include/sys/procfs.h" typedef unsigned long elf_greg_t; typedef elf_greg_t elf_gregset_t[36]; struct elf_siginfo { int si_signo; int si_code; int si_errno; }; struct elf_prstatus { struct elf_siginfo pr_info; short int pr_cursig; unsigned long int pr_sigpend; unsigned long int pr_sighold; __pid_t pr_pid; __pid_t pr_ppid; __pid_t pr_pgrp; __pid_t pr_sid; struct timeval pr_utime; struct timeval pr_stime; struct timeval pr_cutime; struct timeval pr_cstime; elf_gregset_t pr_reg; int pr_fpvalid; }; struct elf_prpsinfo { char pr_state; char pr_sname; char pr_zomb; char pr_nice; unsigned long int pr_flag; unsigned int pr_uid; unsigned int pr_gid; int pr_pid, pr_ppid, pr_pgrp, pr_sid; char pr_fname[16]; char pr_psargs[(80)]; }; typedef void *psaddr_t; typedef elf_gregset_t prgregset_t; typedef elf_fpregset_t prfpregset_t; #line 1 "/usr/include/xos_sft/asm/xreg.h" struct xregs { uint64_t xregs[32]; uint64_t txar; uint64_t sccr; uint64_t watchpoint; uint64_t dcucr; uint64_t rsv[12]; }; struct xfpregs { uint64_t xfpregs[224]; uint64_t xasr; uint64_t fprs; }; #line 136 "/usr/include/sys/procfs.h" typedef struct xregs prxgregset_t; typedef struct xfpregs prxfpregset_t; typedef __pid_t lwpid_t; typedef struct elf_prstatus prstatus_t; typedef struct elf_prpsinfo prpsinfo_t; typedef struct { union { unsigned int pr_regs[32]; double pr_dregs[16]; } pr_fr; unsigned int __unused; unsigned int pr_fsr; unsigned char pr_qcnt; unsigned char pr_q_entrysize; unsigned char pr_en; unsigned int pr_q[64]; } elf_fpregset_t32; typedef unsigned int elf_greg_t32; typedef elf_greg_t32 elf_gregset_t32[38]; struct elf_prstatus32 { struct elf_siginfo pr_info; short int pr_cursig; unsigned int pr_sigpend; unsigned int pr_sighold; __pid_t pr_pid; __pid_t pr_ppid; __pid_t pr_pgrp; __pid_t pr_sid; struct { int tv_sec, tv_usec; } pr_utime, pr_stime, pr_cutime, pr_cstime; elf_gregset_t32 pr_reg; int pr_fpvalid; }; struct elf_prpsinfo32 { char pr_state; char pr_sname; char pr_zomb; char pr_nice; unsigned int pr_flag; unsigned short int pr_uid; unsigned short int pr_gid; int pr_pid, pr_ppid, pr_pgrp, pr_sid; char pr_fname[16]; char pr_psargs[(80)]; }; typedef elf_gregset_t32 prgregset32_t; typedef elf_fpregset_t32 prfpregset32_t; typedef struct elf_prstatus32 prstatus32_t; typedef struct elf_prpsinfo32 prpsinfo32_t; #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_PROCFS_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/resource.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/sys/resource.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/sys/resource.h" #line 1 "/usr/include/bits/resource.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 26 "/usr/include/bits/resource.h" enum __rlimit_resource { RLIMIT_CPU = 0, RLIMIT_FSIZE = 1, RLIMIT_DATA = 2, RLIMIT_STACK = 3, RLIMIT_CORE = 4, __RLIMIT_RSS = 5, RLIMIT_NOFILE = 6, __RLIMIT_OFILE = RLIMIT_NOFILE, RLIMIT_AS = 9, __RLIMIT_NPROC = 7, __RLIMIT_MEMLOCK = 8, __RLIMIT_LOCKS = 10, __RLIMIT_SIGPENDING = 11, __RLIMIT_MSGQUEUE = 12, __RLIMIT_NICE = 13, __RLIMIT_RTPRIO = 14, __RLIMIT_NLIMITS = 15, __RLIM_NLIMITS = __RLIMIT_NLIMITS }; #line 135 "/usr/include/bits/resource.h" typedef __rlim_t rlim_t; #line 150 "/usr/include/bits/resource.h" struct rlimit { rlim_t rlim_cur; rlim_t rlim_max; }; #line 168 "/usr/include/bits/resource.h" enum __rusage_who { RUSAGE_SELF = 0, RUSAGE_CHILDREN = -1 }; #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 183 "/usr/include/bits/resource.h" struct rusage { struct timeval ru_utime; struct timeval ru_stime; long int ru_maxrss; long int ru_ixrss; long int ru_idrss; long int ru_isrss; long int ru_minflt; long int ru_majflt; long int ru_nswap; long int ru_inblock; long int ru_oublock; long int ru_msgsnd; long int ru_msgrcv; long int ru_nsignals; long int ru_nvcsw; long int ru_nivcsw; }; enum __priority_which { PRIO_PROCESS = 0, PRIO_PGRP = 1, PRIO_USER = 2 }; #line 26 "/usr/include/sys/resource.h" typedef __id_t id_t; typedef int __rlimit_resource_t; typedef int __rusage_who_t; typedef int __priority_which_t; extern int getrlimit (__rlimit_resource_t __resource, struct rlimit *__rlimits) ; #line 65 "/usr/include/sys/resource.h" extern int setrlimit (__rlimit_resource_t __resource, const struct rlimit *__rlimits) ; #line 85 "/usr/include/sys/resource.h" extern int getrusage (__rusage_who_t __who, struct rusage *__usage) ; extern int getpriority (__priority_which_t __which, id_t __who) ; extern int setpriority (__priority_which_t __which, id_t __who, int __prio) ; #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_RESOURCE_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: unistd.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/unistd.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/unistd.h" #line 66 "/usr/include/unistd.h" #line 1 "/usr/include/bits/posix_opt.h" #line 174 "/usr/include/unistd.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 189 "/usr/include/unistd.h" typedef __ssize_t ssize_t; #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 198 "/usr/include/unistd.h" typedef __gid_t gid_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 224 "/usr/include/unistd.h" typedef __useconds_t useconds_t; typedef __pid_t pid_t; typedef __intptr_t intptr_t; typedef __socklen_t socklen_t; extern int access (const char *__name, int __type) ; #line 270 "/usr/include/unistd.h" #line 278 "/usr/include/unistd.h" extern __off_t lseek (int __fd, __off_t __offset, int __whence) ; #line 315 "/usr/include/unistd.h" extern int close (int __fd); extern ssize_t read (int __fd, void *__buf, size_t __nbytes) ; extern ssize_t write (int __fd, const void *__buf, size_t __n) ; #line 379 "/usr/include/unistd.h" extern int pipe (int __pipedes[2]) ; extern unsigned int alarm (unsigned int __seconds) ; extern unsigned int sleep (unsigned int __seconds); extern __useconds_t ualarm (__useconds_t __value, __useconds_t __interval) ; extern int usleep (__useconds_t __useconds); extern int pause (void); extern int chown (const char *__file, __uid_t __owner, __gid_t __group) ; extern int fchown (int __fd, __uid_t __owner, __gid_t __group) ; extern int lchown (const char *__file, __uid_t __owner, __gid_t __group) ; #line 455 "/usr/include/unistd.h" extern int chdir (const char *__path) ; extern int fchdir (int __fd) ; extern char *getcwd (char *__buf, size_t __size) ; #line 479 "/usr/include/unistd.h" extern char *getwd (char *__buf) ; extern int dup (int __fd) ; extern int dup2 (int __fd, int __fd2) ; extern char **__environ; extern int execve (const char *__path, char *const __argv[], char *const __envp[]) ; #line 513 "/usr/include/unistd.h" extern int execv (const char *__path, char *const __argv[]) ; extern int execle (const char *__path, const char *__arg, ...) ; extern int execl (const char *__path, const char *__arg, ...) ; extern int execvp (const char *__file, char *const __argv[]) ; extern int execlp (const char *__file, const char *__arg, ...) ; extern int nice (int __inc) ; extern void _exit (int __status) ; #line 1 "/usr/include/bits/confname.h" enum { _PC_LINK_MAX, _PC_MAX_CANON, _PC_MAX_INPUT, _PC_NAME_MAX, _PC_PATH_MAX, _PC_PIPE_BUF, _PC_CHOWN_RESTRICTED, _PC_NO_TRUNC, _PC_VDISABLE, _PC_SYNC_IO, _PC_ASYNC_IO, _PC_PRIO_IO, _PC_SOCK_MAXBUF, _PC_FILESIZEBITS, _PC_REC_INCR_XFER_SIZE, _PC_REC_MAX_XFER_SIZE, _PC_REC_MIN_XFER_SIZE, _PC_REC_XFER_ALIGN, _PC_ALLOC_SIZE_MIN, _PC_SYMLINK_MAX, _PC_2_SYMLINKS }; enum { _SC_ARG_MAX, _SC_CHILD_MAX, _SC_CLK_TCK, _SC_NGROUPS_MAX, _SC_OPEN_MAX, _SC_STREAM_MAX, _SC_TZNAME_MAX, _SC_JOB_CONTROL, _SC_SAVED_IDS, _SC_REALTIME_SIGNALS, _SC_PRIORITY_SCHEDULING, _SC_TIMERS, _SC_ASYNCHRONOUS_IO, _SC_PRIORITIZED_IO, _SC_SYNCHRONIZED_IO, _SC_FSYNC, _SC_MAPPED_FILES, _SC_MEMLOCK, _SC_MEMLOCK_RANGE, _SC_MEMORY_PROTECTION, _SC_MESSAGE_PASSING, _SC_SEMAPHORES, _SC_SHARED_MEMORY_OBJECTS, _SC_AIO_LISTIO_MAX, _SC_AIO_MAX, _SC_AIO_PRIO_DELTA_MAX, _SC_DELAYTIMER_MAX, _SC_MQ_OPEN_MAX, _SC_MQ_PRIO_MAX, _SC_VERSION, _SC_PAGESIZE, _SC_RTSIG_MAX, _SC_SEM_NSEMS_MAX, _SC_SEM_VALUE_MAX, _SC_SIGQUEUE_MAX, _SC_TIMER_MAX, _SC_BC_BASE_MAX, _SC_BC_DIM_MAX, _SC_BC_SCALE_MAX, _SC_BC_STRING_MAX, _SC_COLL_WEIGHTS_MAX, _SC_EQUIV_CLASS_MAX, _SC_EXPR_NEST_MAX, _SC_LINE_MAX, _SC_RE_DUP_MAX, _SC_CHARCLASS_NAME_MAX, _SC_2_VERSION, _SC_2_C_BIND, _SC_2_C_DEV, _SC_2_FORT_DEV, _SC_2_FORT_RUN, _SC_2_SW_DEV, _SC_2_LOCALEDEF, _SC_PII, _SC_PII_XTI, _SC_PII_SOCKET, _SC_PII_INTERNET, _SC_PII_OSI, _SC_POLL, _SC_SELECT, _SC_UIO_MAXIOV, _SC_IOV_MAX = _SC_UIO_MAXIOV, _SC_PII_INTERNET_STREAM, _SC_PII_INTERNET_DGRAM, _SC_PII_OSI_COTS, _SC_PII_OSI_CLTS, _SC_PII_OSI_M, _SC_T_IOV_MAX, _SC_THREADS, _SC_THREAD_SAFE_FUNCTIONS, _SC_GETGR_R_SIZE_MAX, _SC_GETPW_R_SIZE_MAX, _SC_LOGIN_NAME_MAX, _SC_TTY_NAME_MAX, _SC_THREAD_DESTRUCTOR_ITERATIONS, _SC_THREAD_KEYS_MAX, _SC_THREAD_STACK_MIN, _SC_THREAD_THREADS_MAX, _SC_THREAD_ATTR_STACKADDR, _SC_THREAD_ATTR_STACKSIZE, _SC_THREAD_PRIORITY_SCHEDULING, _SC_THREAD_PRIO_INHERIT, _SC_THREAD_PRIO_PROTECT, _SC_THREAD_PROCESS_SHARED, _SC_NPROCESSORS_CONF, _SC_NPROCESSORS_ONLN, _SC_PHYS_PAGES, _SC_AVPHYS_PAGES, _SC_ATEXIT_MAX, _SC_PASS_MAX, _SC_XOPEN_VERSION, _SC_XOPEN_XCU_VERSION, _SC_XOPEN_UNIX, _SC_XOPEN_CRYPT, _SC_XOPEN_ENH_I18N, _SC_XOPEN_SHM, _SC_2_CHAR_TERM, _SC_2_C_VERSION, _SC_2_UPE, _SC_XOPEN_XPG2, _SC_XOPEN_XPG3, _SC_XOPEN_XPG4, _SC_CHAR_BIT, _SC_CHAR_MAX, _SC_CHAR_MIN, _SC_INT_MAX, _SC_INT_MIN, _SC_LONG_BIT, _SC_WORD_BIT, _SC_MB_LEN_MAX, _SC_NZERO, _SC_SSIZE_MAX, _SC_SCHAR_MAX, _SC_SCHAR_MIN, _SC_SHRT_MAX, _SC_SHRT_MIN, _SC_UCHAR_MAX, _SC_UINT_MAX, _SC_ULONG_MAX, _SC_USHRT_MAX, _SC_NL_ARGMAX, _SC_NL_LANGMAX, _SC_NL_MSGMAX, _SC_NL_NMAX, _SC_NL_SETMAX, _SC_NL_TEXTMAX, _SC_XBS5_ILP32_OFF32, _SC_XBS5_ILP32_OFFBIG, _SC_XBS5_LP64_OFF64, _SC_XBS5_LPBIG_OFFBIG, _SC_XOPEN_LEGACY, _SC_XOPEN_REALTIME, _SC_XOPEN_REALTIME_THREADS, _SC_ADVISORY_INFO, _SC_BARRIERS, _SC_BASE, _SC_C_LANG_SUPPORT, _SC_C_LANG_SUPPORT_R, _SC_CLOCK_SELECTION, _SC_CPUTIME, _SC_THREAD_CPUTIME, _SC_DEVICE_IO, _SC_DEVICE_SPECIFIC, _SC_DEVICE_SPECIFIC_R, _SC_FD_MGMT, _SC_FIFO, _SC_PIPE, _SC_FILE_ATTRIBUTES, _SC_FILE_LOCKING, _SC_FILE_SYSTEM, _SC_MONOTONIC_CLOCK, _SC_MULTI_PROCESS, _SC_SINGLE_PROCESS, _SC_NETWORKING, _SC_READER_WRITER_LOCKS, _SC_SPIN_LOCKS, _SC_REGEXP, _SC_REGEX_VERSION, _SC_SHELL, _SC_SIGNALS, _SC_SPAWN, _SC_SPORADIC_SERVER, _SC_THREAD_SPORADIC_SERVER, _SC_SYSTEM_DATABASE, _SC_SYSTEM_DATABASE_R, _SC_TIMEOUTS, _SC_TYPED_MEMORY_OBJECTS, _SC_USER_GROUPS, _SC_USER_GROUPS_R, _SC_2_PBS, _SC_2_PBS_ACCOUNTING, _SC_2_PBS_LOCATE, _SC_2_PBS_MESSAGE, _SC_2_PBS_TRACK, _SC_SYMLOOP_MAX, _SC_STREAMS, _SC_2_PBS_CHECKPOINT, _SC_V6_ILP32_OFF32, _SC_V6_ILP32_OFFBIG, _SC_V6_LP64_OFF64, _SC_V6_LPBIG_OFFBIG, _SC_HOST_NAME_MAX, _SC_TRACE, _SC_TRACE_EVENT_FILTER, _SC_TRACE_INHERIT, _SC_TRACE_LOG, _SC_LEVEL1_ICACHE_SIZE, _SC_LEVEL1_ICACHE_ASSOC, _SC_LEVEL1_ICACHE_LINESIZE, _SC_LEVEL1_DCACHE_SIZE, _SC_LEVEL1_DCACHE_ASSOC, _SC_LEVEL1_DCACHE_LINESIZE, _SC_LEVEL2_CACHE_SIZE, _SC_LEVEL2_CACHE_ASSOC, _SC_LEVEL2_CACHE_LINESIZE, _SC_LEVEL3_CACHE_SIZE, _SC_LEVEL3_CACHE_ASSOC, _SC_LEVEL3_CACHE_LINESIZE, _SC_LEVEL4_CACHE_SIZE, _SC_LEVEL4_CACHE_ASSOC, _SC_LEVEL4_CACHE_LINESIZE, _SC_IPV6 = _SC_LEVEL1_ICACHE_SIZE + 50, _SC_RAW_SOCKETS }; enum { _CS_PATH, _CS_V6_WIDTH_RESTRICTED_ENVS, _CS_GNU_LIBC_VERSION, _CS_GNU_LIBPTHREAD_VERSION, _CS_LFS_CFLAGS = 1000, _CS_LFS_LDFLAGS, _CS_LFS_LIBS, _CS_LFS_LINTFLAGS, _CS_LFS64_CFLAGS, _CS_LFS64_LDFLAGS, _CS_LFS64_LIBS, _CS_LFS64_LINTFLAGS, _CS_XBS5_ILP32_OFF32_CFLAGS = 1100, _CS_XBS5_ILP32_OFF32_LDFLAGS, _CS_XBS5_ILP32_OFF32_LIBS, _CS_XBS5_ILP32_OFF32_LINTFLAGS, _CS_XBS5_ILP32_OFFBIG_CFLAGS, _CS_XBS5_ILP32_OFFBIG_LDFLAGS, _CS_XBS5_ILP32_OFFBIG_LIBS, _CS_XBS5_ILP32_OFFBIG_LINTFLAGS, _CS_XBS5_LP64_OFF64_CFLAGS, _CS_XBS5_LP64_OFF64_LDFLAGS, _CS_XBS5_LP64_OFF64_LIBS, _CS_XBS5_LP64_OFF64_LINTFLAGS, _CS_XBS5_LPBIG_OFFBIG_CFLAGS, _CS_XBS5_LPBIG_OFFBIG_LDFLAGS, _CS_XBS5_LPBIG_OFFBIG_LIBS, _CS_XBS5_LPBIG_OFFBIG_LINTFLAGS, _CS_POSIX_V6_ILP32_OFF32_CFLAGS, _CS_POSIX_V6_ILP32_OFF32_LDFLAGS, _CS_POSIX_V6_ILP32_OFF32_LIBS, _CS_POSIX_V6_ILP32_OFF32_LINTFLAGS, _CS_POSIX_V6_ILP32_OFFBIG_CFLAGS, _CS_POSIX_V6_ILP32_OFFBIG_LDFLAGS, _CS_POSIX_V6_ILP32_OFFBIG_LIBS, _CS_POSIX_V6_ILP32_OFFBIG_LINTFLAGS, _CS_POSIX_V6_LP64_OFF64_CFLAGS, _CS_POSIX_V6_LP64_OFF64_LDFLAGS, _CS_POSIX_V6_LP64_OFF64_LIBS, _CS_POSIX_V6_LP64_OFF64_LINTFLAGS, _CS_POSIX_V6_LPBIG_OFFBIG_CFLAGS, _CS_POSIX_V6_LPBIG_OFFBIG_LDFLAGS, _CS_POSIX_V6_LPBIG_OFFBIG_LIBS, _CS_POSIX_V6_LPBIG_OFFBIG_LINTFLAGS }; #line 555 "/usr/include/unistd.h" extern long int pathconf (const char *__path, int __name) ; extern long int fpathconf (int __fd, int __name) ; extern long int sysconf (int __name) ; extern size_t confstr (int __name, char *__buf, size_t __len) ; extern __pid_t getpid (void) ; extern __pid_t getppid (void) ; extern __pid_t getpgrp (void) ; #line 589 "/usr/include/unistd.h" extern __pid_t __getpgid (__pid_t __pid) ; extern int setpgid (__pid_t __pid, __pid_t __pgid) ; extern int setpgrp (void) ; #line 630 "/usr/include/unistd.h" extern __pid_t setsid (void) ; extern __uid_t getuid (void) ; extern __uid_t geteuid (void) ; extern __gid_t getgid (void) ; extern __gid_t getegid (void) ; extern int getgroups (int __size, __gid_t __list[]) ; extern int setuid (__uid_t __uid) ; extern int setreuid (__uid_t __ruid, __uid_t __euid) ; extern int seteuid (__uid_t __uid) ; extern int setgid (__gid_t __gid) ; extern int setregid (__gid_t __rgid, __gid_t __egid) ; extern int setegid (__gid_t __gid) ; #line 718 "/usr/include/unistd.h" extern __pid_t fork (void) ; extern __pid_t vfork (void) ; extern char *ttyname (int __fd) ; extern int ttyname_r (int __fd, char *__buf, size_t __buflen) ; extern int isatty (int __fd) ; extern int ttyslot (void) ; extern int link (const char *__from, const char *__to) ; #line 766 "/usr/include/unistd.h" extern int symlink (const char *__from, const char *__to) ; extern ssize_t readlink (const char * __path, char * __buf, size_t __len) ; #line 790 "/usr/include/unistd.h" extern int unlink (const char *__name) ; extern int rmdir (const char *__path) ; extern __pid_t tcgetpgrp (int __fd) ; extern int tcsetpgrp (int __fd, __pid_t __pgrp_id) ; extern char *getlogin (void); extern int getlogin_r (char *__name, size_t __name_len) ; extern int setlogin (const char *__name) ; #line 1 "/usr/include/getopt.h" #line 48 "/usr/include/getopt.h" extern char *optarg; extern int optind; extern int opterr; extern int optopt; #line 122 "/usr/include/getopt.h" extern int getopt (int ___argc, char *const *___argv, const char *__shortopts) ; #line 169 "/usr/include/getopt.h" #line 838 "/usr/include/unistd.h" extern int gethostname (char *__name, size_t __len) ; extern int sethostname (const char *__name, size_t __len) ; extern int sethostid (long int __id) ; extern int getdomainname (char *__name, size_t __len) ; extern int setdomainname (const char *__name, size_t __len) ; extern int vhangup (void) ; extern int revoke (const char *__file) ; extern int profil (unsigned short int *__sample_buffer, size_t __size, size_t __offset, unsigned int __scale) ; extern int acct (const char *__name) ; extern char *getusershell (void) ; extern void endusershell (void) ; extern void setusershell (void) ; extern int daemon (int __nochdir, int __noclose) ; extern int chroot (const char *__path) ; extern char *getpass (const char *__prompt) ; extern int fsync (int __fd); extern long int gethostid (void); extern void sync (void) ; extern int getpagesize (void) ; extern int getdtablesize (void) ; extern int truncate (const char *__file, __off_t __length) ; #line 963 "/usr/include/unistd.h" extern int ftruncate (int __fd, __off_t __length) ; #line 982 "/usr/include/unistd.h" extern int brk (void *__addr) ; extern void *sbrk (intptr_t __delta) ; extern long int syscall (long int __sysno, ...) ; extern int lockf (int __fd, int __cmd, __off_t __len) ; #line 1047 "/usr/include/unistd.h" #line 1061 "/usr/include/unistd.h" extern int fdatasync (int __fildes); #line 1088 "/usr/include/unistd.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_UNISTD_H" to "1" ================================================================================ TEST check from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: netinet/in.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/netinet/in.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 24 "/usr/include/netinet/in.h" #line 1 "/usr/include/stdint.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/stdint.h" #line 1 "/usr/include/bits/wchar.h" #line 28 "/usr/include/stdint.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/stdint.h" typedef signed char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char uint8_t; typedef unsigned short int uint16_t; typedef unsigned int uint32_t; typedef unsigned long int uint64_t; typedef signed char int_least8_t; typedef short int int_least16_t; typedef int int_least32_t; typedef long int int_least64_t; typedef unsigned char uint_least8_t; typedef unsigned short int uint_least16_t; typedef unsigned int uint_least32_t; typedef unsigned long int uint_least64_t; typedef signed char int_fast8_t; typedef long int int_fast16_t; typedef long int int_fast32_t; typedef long int int_fast64_t; #line 102 "/usr/include/stdint.h" typedef unsigned char uint_fast8_t; typedef unsigned long int uint_fast16_t; typedef unsigned long int uint_fast32_t; typedef unsigned long int uint_fast64_t; #line 115 "/usr/include/stdint.h" typedef long int intptr_t; typedef unsigned long int uintptr_t; #line 131 "/usr/include/stdint.h" typedef long int intmax_t; typedef unsigned long int uintmax_t; #line 143 "/usr/include/stdint.h" #line 156 "/usr/include/stdint.h" #line 205 "/usr/include/stdint.h" #line 215 "/usr/include/stdint.h" #line 226 "/usr/include/stdint.h" #line 238 "/usr/include/stdint.h" #line 259 "/usr/include/stdint.h" #line 298 "/usr/include/stdint.h" #line 308 "/usr/include/stdint.h" #line 317 "/usr/include/stdint.h" #line 25 "/usr/include/netinet/in.h" #line 1 "/usr/include/sys/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/socket.h" #line 1 "/usr/include/sys/uio.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/sys/uio.h" #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; #line 172 "/usr/include/sys/types.h" typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 25 "/usr/include/sys/uio.h" #line 1 "/usr/include/bits/uio.h" struct iovec { void *iov_base; size_t iov_len; }; #line 30 "/usr/include/sys/uio.h" extern ssize_t readv (int __fd, const struct iovec *__iovec, int __count); extern ssize_t writev (int __fd, const struct iovec *__iovec, int __count); #line 29 "/usr/include/sys/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 31 "/usr/include/sys/socket.h" #line 1 "/usr/include/bits/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 31 "/usr/include/bits/socket.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 7 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "/usr/include/bits/posix1_lim.h" #line 1 "/usr/include/bits/local_lim.h" #line 34 "/usr/include/bits/local_lim.h" #line 1 "/usr/include/linux/limits.h" #line 17 "/usr/include/linux/limits.h" #line 37 "/usr/include/bits/local_lim.h" #line 154 "/usr/include/bits/posix1_lim.h" #line 62 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 1 "/usr/include/bits/posix2_lim.h" #line 87 "/usr/include/bits/posix2_lim.h" #line 66 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/limits.h" #line 33 "/usr/include/bits/socket.h" typedef __socklen_t socklen_t; enum __socket_type { SOCK_STREAM = 1, SOCK_DGRAM = 2, SOCK_RAW = 3, SOCK_RDM = 4, SOCK_SEQPACKET = 5, SOCK_PACKET = 10 }; #line 96 "/usr/include/bits/socket.h" #line 130 "/usr/include/bits/socket.h" #line 142 "/usr/include/bits/socket.h" #line 1 "/usr/include/bits/sockaddr.h" typedef unsigned short int sa_family_t; #line 148 "/usr/include/bits/socket.h" struct sockaddr { sa_family_t sa_family; char sa_data[14]; }; #line 166 "/usr/include/bits/socket.h" struct sockaddr_storage { sa_family_t ss_family; __uint64_t __ss_align; char __ss_padding[(128 - (2 * sizeof (__uint64_t)))]; }; enum { MSG_OOB = 0x01, MSG_PEEK = 0x02, MSG_DONTROUTE = 0x04, #line 189 "/usr/include/bits/socket.h" MSG_CTRUNC = 0x08, MSG_PROXY = 0x10, MSG_TRUNC = 0x20, MSG_DONTWAIT = 0x40, MSG_EOR = 0x80, MSG_WAITALL = 0x100, MSG_FIN = 0x200, MSG_SYN = 0x400, MSG_CONFIRM = 0x800, MSG_RST = 0x1000, MSG_ERRQUEUE = 0x2000, MSG_NOSIGNAL = 0x4000, MSG_MORE = 0x8000, MSG_CMSG_CLOEXEC = 0x40000000 }; struct msghdr { void *msg_name; socklen_t msg_namelen; struct iovec *msg_iov; size_t msg_iovlen; void *msg_control; size_t msg_controllen; int msg_flags; }; struct cmsghdr { size_t cmsg_len; int cmsg_level; int cmsg_type; unsigned char __cmsg_data []; }; #line 272 "/usr/include/bits/socket.h" extern struct cmsghdr *__cmsg_nxthdr (struct msghdr *__mhdr, struct cmsghdr *__cmsg) ; #line 297 "/usr/include/bits/socket.h" enum { SCM_RIGHTS = 0x01 , SCM_CREDENTIALS = 0x02 }; struct ucred { pid_t pid; uid_t uid; gid_t gid; }; #line 1 "/usr/include/asm/socket.h" #line 1 "/usr/include/asm-s64fx/socket.h" #line 1 "/usr/include/asm/sockios.h" #line 1 "/usr/include/asm-s64fx/sockios.h" #line 12 "/usr/include/asm-s64fx/sockios.h" #line 6 "/usr/include/asm/sockios.h" #line 6 "/usr/include/asm-s64fx/socket.h" #line 19 "/usr/include/asm-s64fx/socket.h" #line 26 "/usr/include/asm-s64fx/socket.h" #line 36 "/usr/include/asm-s64fx/socket.h" #line 6 "/usr/include/asm/socket.h" #line 321 "/usr/include/bits/socket.h" struct linger { int l_onoff; int l_linger; }; #line 37 "/usr/include/sys/socket.h" struct osockaddr { unsigned short int sa_family; unsigned char sa_data[14]; }; enum { SHUT_RD = 0, SHUT_WR, SHUT_RDWR }; #line 96 "/usr/include/sys/socket.h" extern int socket (int __domain, int __type, int __protocol) ; extern int socketpair (int __domain, int __type, int __protocol, int __fds[2]) ; extern int bind (int __fd, const struct sockaddr * __addr, socklen_t __len) ; extern int getsockname (int __fd, struct sockaddr * __addr, socklen_t * __len) ; extern int connect (int __fd, const struct sockaddr * __addr, socklen_t __len); extern int getpeername (int __fd, struct sockaddr * __addr, socklen_t * __len) ; extern ssize_t send (int __fd, const void *__buf, size_t __n, int __flags); extern ssize_t recv (int __fd, void *__buf, size_t __n, int __flags); extern ssize_t sendto (int __fd, const void *__buf, size_t __n, int __flags, const struct sockaddr * __addr, socklen_t __addr_len); extern ssize_t recvfrom (int __fd, void * __buf, size_t __n, int __flags, struct sockaddr * __addr, socklen_t * __addr_len); extern ssize_t sendmsg (int __fd, const struct msghdr *__message, int __flags); extern ssize_t recvmsg (int __fd, struct msghdr *__message, int __flags); extern int getsockopt (int __fd, int __level, int __optname, void * __optval, socklen_t * __optlen) ; extern int setsockopt (int __fd, int __level, int __optname, const void *__optval, socklen_t __optlen) ; extern int listen (int __fd, int __n) ; extern int accept (int __fd, struct sockaddr * __addr, socklen_t * __addr_len); extern int shutdown (int __fd, int __how) ; extern int sockatmark (int __fd) ; extern int isfdtype (int __fd, int __fdtype) ; #line 26 "/usr/include/netinet/in.h" enum { IPPROTO_IP = 0, IPPROTO_HOPOPTS = 0, IPPROTO_ICMP = 1, IPPROTO_IGMP = 2, IPPROTO_IPIP = 4, IPPROTO_TCP = 6, IPPROTO_EGP = 8, IPPROTO_PUP = 12, IPPROTO_UDP = 17, IPPROTO_IDP = 22, IPPROTO_TP = 29, IPPROTO_IPV6 = 41, IPPROTO_ROUTING = 43, IPPROTO_FRAGMENT = 44, IPPROTO_RSVP = 46, IPPROTO_GRE = 47, IPPROTO_ESP = 50, IPPROTO_AH = 51, IPPROTO_ICMPV6 = 58, IPPROTO_NONE = 59, IPPROTO_DSTOPTS = 60, IPPROTO_MTP = 92, IPPROTO_ENCAP = 98, IPPROTO_PIM = 103, IPPROTO_COMP = 108, IPPROTO_SCTP = 132, IPPROTO_RAW = 255, IPPROTO_MAX }; typedef uint16_t in_port_t; enum { IPPORT_ECHO = 7, IPPORT_DISCARD = 9, IPPORT_SYSTAT = 11, IPPORT_DAYTIME = 13, IPPORT_NETSTAT = 15, IPPORT_FTP = 21, IPPORT_TELNET = 23, IPPORT_SMTP = 25, IPPORT_TIMESERVER = 37, IPPORT_NAMESERVER = 42, IPPORT_WHOIS = 43, IPPORT_MTP = 57, IPPORT_TFTP = 69, IPPORT_RJE = 77, IPPORT_FINGER = 79, IPPORT_TTYLINK = 87, IPPORT_SUPDUP = 95, IPPORT_EXECSERVER = 512, IPPORT_LOGINSERVER = 513, IPPORT_CMDSERVER = 514, IPPORT_EFSSERVER = 520, IPPORT_BIFFUDP = 512, IPPORT_WHOSERVER = 513, IPPORT_ROUTESERVER = 520, IPPORT_RESERVED = 1024, IPPORT_USERRESERVED = 5000 }; typedef uint32_t in_addr_t; struct in_addr { in_addr_t s_addr; }; struct in6_addr { union { uint8_t u6_addr8[16]; uint16_t u6_addr16[8]; uint32_t u6_addr32[4]; } in6_u; }; extern const struct in6_addr in6addr_any; extern const struct in6_addr in6addr_loopback; struct sockaddr_in { sa_family_t sin_family; in_port_t sin_port; struct in_addr sin_addr; unsigned char sin_zero[sizeof (struct sockaddr) - (sizeof (unsigned short int)) - sizeof (in_port_t) - sizeof (struct in_addr)]; }; struct sockaddr_in6 { sa_family_t sin6_family; in_port_t sin6_port; uint32_t sin6_flowinfo; struct in6_addr sin6_addr; uint32_t sin6_scope_id; }; struct ip_mreq { struct in_addr imr_multiaddr; struct in_addr imr_interface; }; struct ip_mreq_source { struct in_addr imr_multiaddr; struct in_addr imr_interface; struct in_addr imr_sourceaddr; }; struct ipv6_mreq { struct in6_addr ipv6mr_multiaddr; unsigned int ipv6mr_interface; }; struct group_req { uint32_t gr_interface; struct sockaddr_storage gr_group; }; struct group_source_req { uint32_t gsr_interface; struct sockaddr_storage gsr_group; struct sockaddr_storage gsr_source; }; struct ip_msfilter { struct in_addr imsf_multiaddr; struct in_addr imsf_interface; uint32_t imsf_fmode; uint32_t imsf_numsrc; struct in_addr imsf_slist[1]; }; struct group_filter { uint32_t gf_interface; struct sockaddr_storage gf_group; uint32_t gf_fmode; uint32_t gf_numsrc; struct sockaddr_storage gf_slist[1]; }; #line 1 "/usr/include/bits/in.h" #line 53 "/usr/include/bits/in.h" #line 65 "/usr/include/bits/in.h" struct ip_opts { struct in_addr ip_dst; char ip_opts[40]; }; struct ip_mreqn { struct in_addr imr_multiaddr; struct in_addr imr_address; int imr_ifindex; }; struct in_pktinfo { int ipi_ifindex; struct in_addr ipi_spec_dst; struct in_addr ipi_addr; }; #line 115 "/usr/include/bits/in.h" #line 135 "/usr/include/bits/in.h" #line 147 "/usr/include/bits/in.h" #line 344 "/usr/include/netinet/in.h" extern uint32_t ntohl (uint32_t __netlong) ; extern uint16_t ntohs (uint16_t __netshort) ; extern uint32_t htonl (uint32_t __hostlong) ; extern uint16_t htons (uint16_t __hostshort) ; #line 1 "/usr/include/bits/byteswap.h" static unsigned short int __bswap_16 (unsigned short int __bsx) { return ((((__bsx) >> 8) & 0xffu) | (((__bsx) & 0xffu) << 8)); } static unsigned int __bswap_32 (unsigned int __bsx) { return ((((__bsx) & 0xff000000u) >> 24) | (((__bsx) & 0x00ff0000u) >> 8) | (((__bsx) & 0x0000ff00u) << 8) | (((__bsx) & 0x000000ffu) << 24)); } #line 86 "/usr/include/bits/byteswap.h" #line 364 "/usr/include/netinet/in.h" #line 385 "/usr/include/netinet/in.h" extern int bindresvport (int __sockfd, struct sockaddr_in *__sock_in) ; extern int bindresvport6 (int __sockfd, struct sockaddr_in6 *__sock_in) ; struct in6_pktinfo { struct in6_addr ipi6_addr; unsigned int ipi6_ifindex; }; struct ip6_mtuinfo { struct sockaddr_in6 ip6m_addr; uint32_t ip6m_mtu; }; #line 548 "/usr/include/netinet/in.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_NETINET_IN_H" to "1" ================================================================================ TEST checkRecursiveMacros from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:218) TESTING: checkRecursiveMacros from config.headers(config/BuildSystem/config/headers.py:218) Checks that the preprocessor allows recursive macros, and if not defines HAVE_BROKEN_RECURSIVE_MACRO Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" void a(int i, int j) {} #define a(b) a(b,__LINE__) int main() { a(0); ; return 0; } ================================================================================ TEST configureCacheDetails from config.utilities.cacheDetails(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/cacheDetails.py:78) TESTING: configureCacheDetails from config.utilities.cacheDetails(config/BuildSystem/config/utilities/cacheDetails.py:78) Try to determine the size and associativity of the cache. Pushing language C All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include long getconf_LEVEL1_DCACHE_SIZE() { long val = sysconf(_SC_LEVEL1_DCACHE_SIZE); return (16 <= val && val <= 2147483647) ? val : 32768; } int main() { ; return 0; } Popping language C Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include long getconf_LEVEL1_DCACHE_SIZE() { long val = sysconf(_SC_LEVEL1_DCACHE_SIZE); return (16 <= val && val <= 2147483647) ? val : 32768; } int main() { FILE *output = fopen("conftestval","w"); if (!output) return 1; fprintf(output,"%ld",getconf_LEVEL1_DCACHE_SIZE()); fclose(output);; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest Popping language C Defined "LEVEL1_DCACHE_SIZE" to "32768" Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include long getconf_LEVEL1_DCACHE_LINESIZE() { long val = sysconf(_SC_LEVEL1_DCACHE_LINESIZE); return (16 <= val && val <= 2147483647) ? val : 32; } int main() { FILE *output = fopen("conftestval","w"); if (!output) return 1; fprintf(output,"%ld",getconf_LEVEL1_DCACHE_LINESIZE()); fclose(output);; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest Popping language C Defined "LEVEL1_DCACHE_LINESIZE" to "32" Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include long getconf_LEVEL1_DCACHE_ASSOC() { long val = sysconf(_SC_LEVEL1_DCACHE_ASSOC); return (0 <= val && val <= 2147483647) ? val : 2; } int main() { FILE *output = fopen("conftestval","w"); if (!output) return 1; fprintf(output,"%ld",getconf_LEVEL1_DCACHE_ASSOC()); fclose(output);; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails/conftest Popping language C Defined "LEVEL1_DCACHE_ASSOC" to "0" ================================================================================ TEST check_siginfo_t from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:46) TESTING: check_siginfo_t from config.types(config/BuildSystem/config/types.py:46) Checks if siginfo_t exists in signal.h. This check is for windows, and C89 check. Checking for type: siginfo_t All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c", line 13: warning: variable "a" was declared but never referenced siginfo_t a;; ^ Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { siginfo_t a;; return 0; } siginfo_t found Defined "HAVE_SIGINFO_T" to "1" ================================================================================ TEST check__int64 from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:52) TESTING: check__int64 from config.types(config/BuildSystem/config/types.py:52) Checks if __int64 exists. This is primarily for windows. Checking for type: __int64 Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Possible ERROR while running compiler: exit code 512 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c", line 13: error: identifier "__int64" is undefined __int64 a;; ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { __int64 a;; return 0; } __int64 found ================================================================================ TEST checkSizeTypes from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:58) TESTING: checkSizeTypes from config.types(config/BuildSystem/config/types.py:58) Checks for types associated with sizes, such as size_t. Checking for type: size_t Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c", line 13: warning: variable "a" was declared but never referenced size_t a;; ^ Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { size_t a;; return 0; } size_t found ================================================================================ TEST checkFileTypes from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:68) TESTING: checkFileTypes from config.types(config/BuildSystem/config/types.py:68) Checks for types associated with files, such as mode_t, off_t, etc. Checking for type: mode_t Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c", line 13: warning: variable "a" was declared but never referenced mode_t a;; ^ Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { mode_t a;; return 0; } mode_t found Checking for type: off_t Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c", line 13: warning: variable "a" was declared but never referenced off_t a;; ^ Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { off_t a;; return 0; } off_t found ================================================================================ TEST checkIntegerTypes from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:63) TESTING: checkIntegerTypes from config.types(config/BuildSystem/config/types.py:63) Checks for types associated with integers, such as int32_t. Checking for type: int32_t Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c", line 13: warning: variable "a" was declared but never referenced int32_t a;; ^ Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { int32_t a;; return 0; } int32_t found ================================================================================ TEST checkPID from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:74) TESTING: checkPID from config.types(config/BuildSystem/config/types.py:74) Checks for pid_t, and defines it if necessary Checking for type: pid_t Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c", line 13: warning: variable "a" was declared but never referenced pid_t a;; ^ Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { pid_t a;; return 0; } pid_t found ================================================================================ TEST checkUID from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:78) TESTING: checkUID from config.types(config/BuildSystem/config/types.py:78) Checks for uid_t and gid_t, and defines them if necessary Source: #include "confdefs.h" #include "conffix.h" #include Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c" #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; typedef char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c" ================================================================================ TEST checkSignal from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:85) TESTING: checkSignal from config.types(config/BuildSystem/config/types.py:85) Checks the return type of signal() and defines RETSIGTYPE to that type name Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #ifdef signal #undef signal #endif #ifdef __cplusplus extern "C" void (*signal (int, void(*)(int)))(int); #else void (*signal())(); #endif int main() { ; return 0; } Defined "RETSIGTYPE" to "void" ================================================================================ TEST checkC99Complex from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:106) TESTING: checkC99Complex from config.types(config/BuildSystem/config/types.py:106) Check for complex numbers in in C99 std Note that since PETSc source code uses _Complex we test specifically for that, not complex Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c", line 6: warning: variable "x" was set but never used double _Complex x; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { double _Complex x; x = I; ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c", line 6: warning: variable "x" was set but never used double _Complex x; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { double _Complex x; x = I; ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_C99_COMPLEX" to "1" ================================================================================ TEST checkCxxComplex from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:117) TESTING: checkCxxComplex from config.types(config/BuildSystem/config/types.py:117) Check for complex numbers in namespace std Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { std::complex x; ; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_CXX_COMPLEX" to "1" Popping language Cxx ================================================================================ TEST checkFortranKind from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:138) TESTING: checkFortranKind from config.types(config/BuildSystem/config/types.py:138) Checks whether selected_int_kind etc work USE_FORTRANKIND Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.F Possible ERROR while running compiler: stderr: Fortran diagnostic messages: program name(main) jwd2006i-i "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.F", line 3: 'i' is declared but never referenced. jwd2006i-i "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.F", line 4: 'd' is declared but never referenced. Source: program main integer(kind=selected_int_kind(10)) i real(kind=selected_real_kind(10)) d end Defined "USE_FORTRANKIND" to "1" Popping language FC ================================================================================ TEST checkConst from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:150) TESTING: checkConst from config.types(config/BuildSystem/config/types.py:150) Checks for working const, and if not found defines it to empty string Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c", line 25: warning: variable "x" is used before its value is set if (x[0]); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c", line 30: warning: variable "t" is used before its value is set *t++ = 0; ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c", line 46: warning: variable "b" is used before its value is set struct s *b; b->j = 5; ^ Source: #include "confdefs.h" #include "conffix.h" int main() { /* Ultrix mips cc rejects this. */ typedef int charset[2]; const charset x; /* SunOS 4.1.1 cc rejects this. */ char const *const *ccp; char **p; /* NEC SVR4.0.2 mips cc rejects this. */ struct point {int x, y;}; static struct point const zero = {0,0}; /* AIX XL C 1.02.0.0 rejects this. It does not let you subtract one const X* pointer from another in an arm of an if-expression whose if-part is not a constant expression */ const char *g = "string"; ccp = &g + (g ? g-g : 0); /* HPUX 7.0 cc rejects these. */ ++ccp; p = (char**) ccp; ccp = (char const *const *) p; /* This section avoids unused variable warnings */ if (zero.x); if (x[0]); { /* SCO 3.2v4 cc rejects this. */ char *t; char const *s = 0 ? (char *) 0 : (char const *) 0; *t++ = 0; if (*s); } { /* Someone thinks the Sun supposedly-ANSI compiler will reject this. */ int x[] = {25, 17}; const int *foo = &x[0]; ++foo; } { /* Sun SC1.0 ANSI compiler rejects this -- but not the above. */ typedef const int *iptr; iptr p = 0; ++p; } { /* AIX XL C 1.02.0.0 rejects this saying "k.c", line 2.27: 1506-025 (S) Operand must be a modifiable lvalue. */ struct s { int j; const int *ap[3]; }; struct s *b; b->j = 5; } { /* ULTRIX-32 V3.1 (Rev 9) vcc rejects this */ const int foo = 10; /* Get rid of unused variable warning */ if (foo); } ; return 0; } ================================================================================ TEST checkEndian from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:206) TESTING: checkEndian from config.types(config/BuildSystem/config/types.py:206) If the machine is big endian, defines WORDS_BIGENDIAN Defined "WORDS_BIGENDIAN" to "1" ================================================================================ TEST checkSizeof from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:259) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:259) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: char Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(char)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Popping language C Defined "SIZEOF_CHAR" to "1" ================================================================================ TEST checkSizeof from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:259) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:259) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: void * Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(void *)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Popping language C Defined "SIZEOF_VOID_P" to "8" ================================================================================ TEST checkSizeof from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:259) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:259) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: short Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(short)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Popping language C Defined "SIZEOF_SHORT" to "2" ================================================================================ TEST checkSizeof from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:259) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:259) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: int Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(int)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Popping language C Defined "SIZEOF_INT" to "4" ================================================================================ TEST checkSizeof from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:259) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:259) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: long Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(long)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Popping language C Defined "SIZEOF_LONG" to "8" ================================================================================ TEST checkSizeof from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:259) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:259) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: long long Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(long long)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Popping language C Defined "SIZEOF_LONG_LONG" to "8" ================================================================================ TEST checkSizeof from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:259) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:259) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: float Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(float)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Popping language C Defined "SIZEOF_FLOAT" to "4" ================================================================================ TEST checkSizeof from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:259) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:259) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: double Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(double)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Popping language C Defined "SIZEOF_DOUBLE" to "8" ================================================================================ TEST checkSizeof from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:259) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:259) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: size_t Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(size_t)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Popping language C Defined "SIZEOF_SIZE_T" to "8" ================================================================================ TEST checkBitsPerByte from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:310) TESTING: checkBitsPerByte from config.types(config/BuildSystem/config/types.py:310) Determine the nubmer of bits per byte and define BITS_PER_BYTE Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #if STDC_HEADERS #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); char val[2]; int i = 0; if (!f) exit(1); val[0]='\1'; val[1]='\0'; while(val[0]) {val[0] <<= 1; i++;} fprintf(f, "%d\n", i); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Defined "BITS_PER_BYTE" to "8" ================================================================================ TEST checkVisibility from config.types(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/types.py:356) TESTING: checkVisibility from config.types(config/BuildSystem/config/types.py:356) ================================================================================ TEST configureMemAlign from PETSc.options.memAlign(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/memAlign.py:30) TESTING: configureMemAlign from PETSc.options.memAlign(config/PETSc/options/memAlign.py:30) Choose alignment Defined "MEMALIGN" to "16" Memory alignment is 16 ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [socket] in library ['socket', 'nsl'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char socket(); static void _check_socket() { socket(); } int main() { _check_socket();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -lsocket -lnsl -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lsocket Popping language C ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [handle_sigfpes] in library ['fpe'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char handle_sigfpes(); static void _check_handle_sigfpes() { handle_sigfpes(); } int main() { _check_handle_sigfpes();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -lfpe -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lfpe Popping language C ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [socket] in library ['socket', 'nsl'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char socket(); static void _check_socket() { socket(); } int main() { _check_socket();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -lsocket -lnsl -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lsocket Popping language C ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [handle_sigfpes] in library ['fpe'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char handle_sigfpes(); static void _check_handle_sigfpes() { handle_sigfpes(); } int main() { _check_handle_sigfpes();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -lfpe -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lfpe Popping language C ================================================================================ TEST checkMath from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:251) TESTING: checkMath from config.libraries(config/BuildSystem/config/libraries.py:251) Check for sin() in libm, the math library Checking for functions [sin floor log10 pow] in library [''] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c", line 5: warning: variable "y" was set but never used static void _check_sin() { double x = 0,y; y = sin(x); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c", line 8: warning: variable "y" was set but never used static void _check_floor() { double x = 0,y; y = floor(x); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c", line 11: warning: variable "y" was set but never used static void _check_log10() { double x = 0,y; y = log10(x); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c", line 14: warning: variable "y" was set but never used static void _check_pow() { double x = 0,y ; y = pow(x, x); ^ Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double sin(double); static void _check_sin() { double x = 0,y; y = sin(x); ; } double floor(double); static void _check_floor() { double x = 0,y; y = floor(x); ; } double log10(double); static void _check_log10() { double x = 0,y; y = log10(x); ; } double pow(double, double); static void _check_pow() { double x = 0,y ; y = pow(x, x); ; } int main() { _check_sin(); _check_floor(); _check_log10(); _check_pow();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Math functions are linked in by default ================================================================================ TEST checkMathErf from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:267) TESTING: checkMathErf from config.libraries(config/BuildSystem/config/libraries.py:267) Check for erf() in libm, the math library Checking for functions [erf] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c", line 5: warning: variable "y" was set but never used static void _check_erf() { double x = 0,y; y = erf(x); ^ Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double erf(double); static void _check_erf() { double x = 0,y; y = erf(x); ; } int main() { _check_erf();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C erf() found Defined "HAVE_ERF" to "1" ================================================================================ TEST checkMathTgamma from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:276) TESTING: checkMathTgamma from config.libraries(config/BuildSystem/config/libraries.py:276) Check for tgama() in libm, the math library Checking for functions [tgamma] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c", line 5: warning: variable "y" was set but never used static void _check_tgamma() { double x = 0,y; y = tgamma(x); ^ Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double tgamma(double); static void _check_tgamma() { double x = 0,y; y = tgamma(x); ; } int main() { _check_tgamma();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C tgamma() found Defined "HAVE_TGAMMA" to "1" ================================================================================ TEST checkMathFenv from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:285) TESTING: checkMathFenv from config.libraries(config/BuildSystem/config/libraries.py:285) Checks if can be used with FE_DFL_ENV Checking for functions [fesetenv] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_fesetenv() { fesetenv(FE_DFL_ENV);; } int main() { _check_fesetenv();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Defined "HAVE_FENV_H" to "1" ================================================================================ TEST checkMathLog2 from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:293) TESTING: checkMathLog2 from config.libraries(config/BuildSystem/config/libraries.py:293) Check for log2() in libm, the math library Checking for functions [log2] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c", line 5: warning: variable "y" was set but never used static void _check_log2() { double x = 1,y; y = log2(x); ^ Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double log2(double); static void _check_log2() { double x = 1,y; y = log2(x); ; } int main() { _check_log2();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C log2() found Defined "HAVE_LOG2" to "1" ================================================================================ TEST checkCompression from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:302) TESTING: checkCompression from config.libraries(config/BuildSystem/config/libraries.py:302) Check for libz, the compression library Checking for functions [compress uncompress] in library [''] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c", line 5: warning: variable "ret" was set but never used static void _check_compress() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = compress(dest, &destLen, source, sourceLen); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c", line 8: warning: variable "ret" was set but never used static void _check_uncompress() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = uncompress(dest, &destLen, source, sourceLen); ^ Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ int compress(char *dest, unsigned long *destLen, const char *source, unsigned long sourceLen); static void _check_compress() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = compress(dest, &destLen, source, sourceLen); ; } int uncompress(char *dest, unsigned long *destLen, const char *source, unsigned long sourceLen); static void _check_uncompress() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = uncompress(dest, &destLen, source, sourceLen); ; } int main() { _check_compress(); _check_uncompress();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o: In function `_check_compress': conftest.c:(.text+0x48): undefined reference to `compress' /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o: In function `_check_uncompress': conftest.c:(.text+0xa8): undefined reference to `uncompress' Popping language C Checking for functions [compress uncompress] in library ['z'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c", line 5: warning: variable "ret" was set but never used static void _check_compress() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = compress(dest, &destLen, source, sourceLen); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c", line 8: warning: variable "ret" was set but never used static void _check_uncompress() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = uncompress(dest, &destLen, source, sourceLen); ^ Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ int compress(char *dest, unsigned long *destLen, const char *source, unsigned long sourceLen); static void _check_compress() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = compress(dest, &destLen, source, sourceLen); ; } int uncompress(char *dest, unsigned long *destLen, const char *source, unsigned long sourceLen); static void _check_uncompress() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = uncompress(dest, &destLen, source, sourceLen); ; } int main() { _check_compress(); _check_uncompress();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -lz -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_LIBZ" to "1" Popping language C Using libz for the compression library ================================================================================ TEST checkRealtime from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:323) TESTING: checkRealtime from config.libraries(config/BuildSystem/config/libraries.py:323) Check for presence of clock_gettime() in realtime library (POSIX Realtime extensions) Checking for functions [clock_gettime] in library [''] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_clock_gettime() { struct timespec tp; clock_gettime(CLOCK_REALTIME,&tp);; } int main() { _check_clock_gettime();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C realtime functions are linked in by default ================================================================================ TEST checkDynamic from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:339) TESTING: checkDynamic from config.libraries(config/BuildSystem/config/libraries.py:339) Check for the header and libraries necessary for dynamic library manipulation Checking for functions [dlopen] in library ['dl'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dlopen(); static void _check_dlopen() { dlopen(); } int main() { _check_dlopen();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ldl -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_LIBDL" to "1" Popping language C Checking for header: dlfcn.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/dlfcn.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/dlfcn.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 27 "/usr/include/dlfcn.h" #line 1 "/usr/include/bits/dlfcn.h" #line 30 "/usr/include/dlfcn.h" #line 52 "/usr/include/dlfcn.h" extern void *dlopen (const char *__file, int __mode) ; extern int dlclose (void *__handle) ; extern void *dlsym (void * __handle, const char * __name) ; #line 80 "/usr/include/dlfcn.h" extern char *dlerror (void) ; #line 188 "/usr/include/dlfcn.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_DLFCN_H" to "1" ================================================================================ TEST configureLibraryOptions from PETSc.options.libraryOptions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/libraryOptions.py:37) TESTING: configureLibraryOptions from PETSc.options.libraryOptions(config/PETSc/options/libraryOptions.py:37) Sets PETSC_USE_DEBUG, PETSC_USE_INFO, PETSC_USE_LOG, PETSC_USE_CTABLE and PETSC_USE_FORTRAN_KERNELS Defined "USE_LOG" to "1" Defined "USE_DEBUG" to "1" Defined "USE_INFO" to "1" Defined "USE_CTABLE" to "1" **********Checking if running on BGL/IBM detected Checking for functions [bgl_perfctr_void] in library [''] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char bgl_perfctr_void(); static void _check_bgl_perfctr_void() { bgl_perfctr_void(); } int main() { _check_bgl_perfctr_void();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o: In function `_check_bgl_perfctr_void': conftest.c:(.text+0x4): undefined reference to `bgl_perfctr_void' Popping language C Checking for functions [ADIOI_BGL_Open] in library [''] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ADIOI_BGL_Open(); static void _check_ADIOI_BGL_Open() { ADIOI_BGL_Open(); } int main() { _check_ADIOI_BGL_Open();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o: In function `_check_ADIOI_BGL_Open': conftest.c:(.text+0x4): undefined reference to `ADIOI_BGL_Open' Popping language C *********BGL/IBM test failure Defined "USE_BACKWARD_LOOP" to "1" Defined "Alignx(a,b)" to " " ================================================================================ TEST configureISColorValueType from PETSc.options.libraryOptions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/libraryOptions.py:87) TESTING: configureISColorValueType from PETSc.options.libraryOptions(config/PETSc/options/libraryOptions.py:87) Sets PETSC_IS_COLOR_VALUE_TYPE, MPIU_COLORING_VALUE, IS_COLORING_MAX required by ISColor Defined "MPIU_COLORING_VALUE" to "MPI_UNSIGNED_SHORT" Defined "IS_COLORING_MAX" to "65535" Defined "IS_COLOR_VALUE_TYPE" to "short" Defined "IS_COLOR_VALUE_TYPE_SIZE" to "PETSC_SIZEOF_SHORT" ================================================================================ TEST configureCPURelax from config.atomics(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/atomics.py:17) TESTING: configureCPURelax from config.atomics(config/BuildSystem/config/atomics.py:17) Definitions for cpu relax assembly instructions All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics/conftest.c Possible ERROR while running compiler: exit code 256 stderr: .//FCCatRurp.s: Assembler messages: .//FCCatRurp.s:15: Error: Unknown opcode: `rep' Source: #include "confdefs.h" #include "conffix.h" int main() { asm volatile("rep; nop" ::: "memory");; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics/conftest.c Possible ERROR while running compiler: exit code 512 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics/conftest.c", line 5: error: identifier "HMT_low" is undefined do { HMT_low; HMT_medium; __asm__ __volatile__ ("":::"memory"); } while (0); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics/conftest.c", line 5: error: identifier "HMT_medium" is undefined do { HMT_low; HMT_medium; __asm__ __volatile__ ("":::"memory"); } while (0); ^ 2 errors detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics/conftest.c". Source: #include "confdefs.h" #include "conffix.h" int main() { do { HMT_low; HMT_medium; __asm__ __volatile__ ("":::"memory"); } while (0); return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { __asm__ __volatile__ ("":::"memory");; return 0; } Defined "CPU_RELAX()" to "__asm__ __volatile__ ("":::"memory")" ================================================================================ TEST configureMemoryBarriers from config.atomics(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/atomics.py:36) TESTING: configureMemoryBarriers from config.atomics(config/BuildSystem/config/atomics.py:36) Definitions for memory barrier instructions Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics/conftest.c Possible ERROR while running compiler: exit code 256 stderr: .//FCC5GwppX.s: Assembler messages: .//FCC5GwppX.s:15: Error: Unknown opcode: `mfence' Source: #include "confdefs.h" #include "conffix.h" int main() { asm volatile("mfence":::"memory"); return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics/conftest.c Possible ERROR while running compiler: exit code 256 stderr: .//FCCmdgpR2.s: Assembler messages: .//FCCmdgpR2.s:15: Error: Unknown opcode: `lfence' Source: #include "confdefs.h" #include "conffix.h" int main() { asm volatile("lfence":::"memory"); return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics/conftest.c Possible ERROR while running compiler: exit code 256 stderr: .//FCCmd2Nae.s: Assembler messages: .//FCCmd2Nae.s:15: Error: Unknown opcode: `sfence' Source: #include "confdefs.h" #include "conffix.h" int main() { asm volatile("sfence":::"memory"); return 0; } ================================================================================ TEST checkMemcmp from config.functions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/functions.py:110) TESTING: checkMemcmp from config.functions(config/BuildSystem/config/functions.py:110) Check for 8-bit clean memcmp Making executable to test memcmp() All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include void exit(int); int main() { char c0 = 0x40; char c1 = (char) 0x80; char c2 = (char) 0x81; exit(memcmp(&c0, &c2, 1) < 0 && memcmp(&c1, &c2, 1) < 0 ? 0 : 1); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest ================================================================================ TEST checkSysinfo from config.functions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/functions.py:135) TESTING: checkSysinfo from config.functions(config/BuildSystem/config/functions.py:135) Check whether sysinfo takes three arguments, and if it does define HAVE_SYSINFO_3ARG Checking for functions [sysinfo] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sysinfo(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_sysinfo) || defined (__stub___sysinfo) sysinfo_will_always_fail_with_ENOSYS(); #else sysinfo(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_SYSINFO" to "1" Checking for header: linux/kernel.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/linux/kernel.h" struct sysinfo { long uptime; unsigned long loads[3]; unsigned long totalram; unsigned long freeram; unsigned long sharedram; unsigned long bufferram; unsigned long totalswap; unsigned long freeswap; unsigned short procs; unsigned short pad; unsigned long totalhigh; unsigned long freehigh; unsigned int mem_unit; char _f[20-2*sizeof(long)-sizeof(int)]; }; #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_LINUX_KERNEL_H" to "1" Checking for header: sys/sysinfo.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/sys/sysinfo.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/sys/sysinfo.h" #line 1 "/usr/include/linux/kernel.h" struct sysinfo { long uptime; unsigned long loads[3]; unsigned long totalram; unsigned long freeram; unsigned long sharedram; unsigned long bufferram; unsigned long totalswap; unsigned long freeswap; unsigned short procs; unsigned short pad; unsigned long totalhigh; unsigned long freehigh; unsigned int mem_unit; char _f[20-2*sizeof(long)-sizeof(int)]; }; #line 26 "/usr/include/sys/sysinfo.h" extern int sysinfo (struct sysinfo *__info) ; extern int get_nprocs_conf (void) ; extern int get_nprocs (void) ; extern long int get_phys_pages (void) ; extern long int get_avphys_pages (void) ; #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_SYSINFO_H" to "1" Checking for header: sys/systeminfo.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "sys/systeminfo.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "sys/systeminfo.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "sys/systeminfo.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c".: Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c", line 13: catastrophic error: #error directive: "Cannot check sysinfo without special headers" # error "Cannot check sysinfo without special headers" ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" #ifdef HAVE_LINUX_KERNEL_H # include # include # ifdef HAVE_SYS_SYSINFO_H # include # endif #elif defined(HAVE_SYS_SYSTEMINFO_H) # include #else # error "Cannot check sysinfo without special headers" #endif int main() { char buf[10]; long count=10; sysinfo(1, buf, count); ; return 0; } Compile failed inside link ================================================================================ TEST checkVPrintf from config.functions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/functions.py:158) TESTING: checkVPrintf from config.functions(config/BuildSystem/config/functions.py:158) Checks whether vprintf requires a char * last argument, and if it does defines HAVE_VPRINTF_CHAR Checking for functions [vprintf] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char vprintf(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_vprintf) || defined (__stub___vprintf) vprintf_will_always_fail_with_ENOSYS(); #else vprintf(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_VPRINTF" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c", line 8: warning: variable "Argp" is used before its value is set vprintf( "%d", Argp ); ^ Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { va_list Argp; vprintf( "%d", Argp ); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl ================================================================================ TEST checkVFPrintf from config.functions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/functions.py:165) TESTING: checkVFPrintf from config.functions(config/BuildSystem/config/functions.py:165) Checks whether vfprintf requires a char * last argument, and if it does defines HAVE_VFPRINTF_CHAR Checking for functions [vfprintf] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char vfprintf(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_vfprintf) || defined (__stub___vfprintf) vfprintf_will_always_fail_with_ENOSYS(); #else vfprintf(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_VFPRINTF" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c", line 8: warning: variable "Argp" is used before its value is set vfprintf(stdout, "%d", Argp ); ^ Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { va_list Argp; vfprintf(stdout, "%d", Argp ); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl ================================================================================ TEST checkVSNPrintf from config.functions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/functions.py:172) TESTING: checkVSNPrintf from config.functions(config/BuildSystem/config/functions.py:172) Checks whether vsnprintf requires a char * last argument, and if it does defines HAVE_VSNPRINTF_CHAR Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { _vsnprintf(0,0,0,0); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o: In function `main': conftest.c:(.text+0x34): undefined reference to `_vsnprintf' Checking for functions [vsnprintf] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char vsnprintf(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_vsnprintf) || defined (__stub___vsnprintf) vsnprintf_will_always_fail_with_ENOSYS(); #else vsnprintf(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_VSNPRINTF" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c", line 8: warning: variable "Argp" is used before its value is set vsnprintf(str,5, "%d", Argp ); ^ Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { va_list Argp;char str[6]; vsnprintf(str,5, "%d", Argp ); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl ================================================================================ TEST checkNanosleep from config.functions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/functions.py:206) TESTING: checkNanosleep from config.functions(config/BuildSystem/config/functions.py:206) Check for functional nanosleep() - as time.h behaves differently for different compiler flags - like -std=c89 Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { struct timespec tp; tp.tv_sec = 0; tp.tv_nsec = (long)(1e9); nanosleep(&tp,0); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_NANOSLEEP" to "1" ================================================================================ TEST checkSignalHandlerType from config.functions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/functions.py:182) TESTING: checkSignalHandlerType from config.functions(config/BuildSystem/config/functions.py:182) Checks the type of C++ signals handlers, and defines SIGNAL_CAST to the correct value Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include static void myhandler(int sig) {} int main() { signal(SIGFPE,myhandler); ; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "SIGNAL_CAST" to " " Popping language Cxx ================================================================================ TEST checkFreeReturnType from config.functions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/functions.py:192) TESTING: checkFreeReturnType from config.functions(config/BuildSystem/config/functions.py:192) Checks whether free returns void or int, and defines HAVE_FREE_RETURN_INT Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Possible ERROR while running compiler: exit code 512 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c", line 6: warning: variable "p" is used before its value is set int ierr; void *p; ierr = free(p); return 0; ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c", line 6: error: a value of type "void" cannot be assigned to an entity of type "int" int ierr; void *p; ierr = free(p); return 0; ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c", line 8: warning: statement is unreachable return 0; ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c", line 6: warning: variable "ierr" was set but never used int ierr; void *p; ierr = free(p); return 0; ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include int main() { int ierr; void *p; ierr = free(p); return 0; ; return 0; } Compile failed inside link ================================================================================ TEST checkVariableArgumentLists from config.functions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/functions.py:198) TESTING: checkVariableArgumentLists from config.functions(config/BuildSystem/config/functions.py:198) Checks whether the variable argument list functionality is working Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c", line 7: warning: variable "l2" is used before its value is set va_copy(l1, l2); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c", line 10: warning: statement is unreachable return 0; ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c", line 6: warning: variable "l1" was set but never used va_list l1, l2; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { va_list l1, l2; va_copy(l1, l2); return 0; ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_VA_COPY" to "1" ================================================================================ TEST checkClassify from config.functions(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/functions.py:89) TESTING: checkClassify from config.functions(config/BuildSystem/config/functions.py:89) Recursive decompose to rapidly classify functions as found or missing To confirm that a function is missing, we require a compile/link failure with only that function in a compilation unit. In contrast, we can confirm that many functions are present by compiling them all together in a large compilation unit. We optimistically compile everything together, then trim all functions that were named in the error message and bisect the result. The trimming is only an optimization to increase the likelihood of a big-batch compile succeeding; we do not rely on the compiler naming missing functions. Checking for functions [rand getdomainname _sleep snprintf realpath dlsym bzero _getcwd getwd uname _lseek sleep _access lseek usleep dlclose gethostname clock get_nprocs access _snprintf dlerror mkstemp fork getpagesize sbreak memalign sigset getcwd gethostbyname gettimeofday readlink _set_output_format PXFGETARG sigaction strcasecmp dlopen drand48 socket memmove signal popen getrusage times time sysctlbyname stricmp] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char rand(); char getdomainname(); char _sleep(); char snprintf(); char realpath(); char dlsym(); char bzero(); char _getcwd(); char getwd(); char uname(); char _lseek(); char sleep(); char _access(); char lseek(); char usleep(); char dlclose(); char gethostname(); char clock(); char get_nprocs(); char access(); char _snprintf(); char dlerror(); char mkstemp(); char fork(); char getpagesize(); char sbreak(); char memalign(); char sigset(); char getcwd(); char gethostbyname(); char gettimeofday(); char readlink(); char _set_output_format(); char PXFGETARG(); char sigaction(); char strcasecmp(); char dlopen(); char drand48(); char socket(); char memmove(); char signal(); char popen(); char getrusage(); char times(); char time(); char sysctlbyname(); char stricmp(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_rand) || defined (__stub___rand) rand_will_always_fail_with_ENOSYS(); #else rand(); #endif #if defined (__stub_getdomainname) || defined (__stub___getdomainname) getdomainname_will_always_fail_with_ENOSYS(); #else getdomainname(); #endif #if defined (__stub__sleep) || defined (__stub____sleep) _sleep_will_always_fail_with_ENOSYS(); #else _sleep(); #endif #if defined (__stub_snprintf) || defined (__stub___snprintf) snprintf_will_always_fail_with_ENOSYS(); #else snprintf(); #endif #if defined (__stub_realpath) || defined (__stub___realpath) realpath_will_always_fail_with_ENOSYS(); #else realpath(); #endif #if defined (__stub_dlsym) || defined (__stub___dlsym) dlsym_will_always_fail_with_ENOSYS(); #else dlsym(); #endif #if defined (__stub_bzero) || defined (__stub___bzero) bzero_will_always_fail_with_ENOSYS(); #else bzero(); #endif #if defined (__stub__getcwd) || defined (__stub____getcwd) _getcwd_will_always_fail_with_ENOSYS(); #else _getcwd(); #endif #if defined (__stub_getwd) || defined (__stub___getwd) getwd_will_always_fail_with_ENOSYS(); #else getwd(); #endif #if defined (__stub_uname) || defined (__stub___uname) uname_will_always_fail_with_ENOSYS(); #else uname(); #endif #if defined (__stub__lseek) || defined (__stub____lseek) _lseek_will_always_fail_with_ENOSYS(); #else _lseek(); #endif #if defined (__stub_sleep) || defined (__stub___sleep) sleep_will_always_fail_with_ENOSYS(); #else sleep(); #endif #if defined (__stub__access) || defined (__stub____access) _access_will_always_fail_with_ENOSYS(); #else _access(); #endif #if defined (__stub_lseek) || defined (__stub___lseek) lseek_will_always_fail_with_ENOSYS(); #else lseek(); #endif #if defined (__stub_usleep) || defined (__stub___usleep) usleep_will_always_fail_with_ENOSYS(); #else usleep(); #endif #if defined (__stub_dlclose) || defined (__stub___dlclose) dlclose_will_always_fail_with_ENOSYS(); #else dlclose(); #endif #if defined (__stub_gethostname) || defined (__stub___gethostname) gethostname_will_always_fail_with_ENOSYS(); #else gethostname(); #endif #if defined (__stub_clock) || defined (__stub___clock) clock_will_always_fail_with_ENOSYS(); #else clock(); #endif #if defined (__stub_get_nprocs) || defined (__stub___get_nprocs) get_nprocs_will_always_fail_with_ENOSYS(); #else get_nprocs(); #endif #if defined (__stub_access) || defined (__stub___access) access_will_always_fail_with_ENOSYS(); #else access(); #endif #if defined (__stub__snprintf) || defined (__stub____snprintf) _snprintf_will_always_fail_with_ENOSYS(); #else _snprintf(); #endif #if defined (__stub_dlerror) || defined (__stub___dlerror) dlerror_will_always_fail_with_ENOSYS(); #else dlerror(); #endif #if defined (__stub_mkstemp) || defined (__stub___mkstemp) mkstemp_will_always_fail_with_ENOSYS(); #else mkstemp(); #endif #if defined (__stub_fork) || defined (__stub___fork) fork_will_always_fail_with_ENOSYS(); #else fork(); #endif #if defined (__stub_getpagesize) || defined (__stub___getpagesize) getpagesize_will_always_fail_with_ENOSYS(); #else getpagesize(); #endif #if defined (__stub_sbreak) || defined (__stub___sbreak) sbreak_will_always_fail_with_ENOSYS(); #else sbreak(); #endif #if defined (__stub_memalign) || defined (__stub___memalign) memalign_will_always_fail_with_ENOSYS(); #else memalign(); #endif #if defined (__stub_sigset) || defined (__stub___sigset) sigset_will_always_fail_with_ENOSYS(); #else sigset(); #endif #if defined (__stub_getcwd) || defined (__stub___getcwd) getcwd_will_always_fail_with_ENOSYS(); #else getcwd(); #endif #if defined (__stub_gethostbyname) || defined (__stub___gethostbyname) gethostbyname_will_always_fail_with_ENOSYS(); #else gethostbyname(); #endif #if defined (__stub_gettimeofday) || defined (__stub___gettimeofday) gettimeofday_will_always_fail_with_ENOSYS(); #else gettimeofday(); #endif #if defined (__stub_readlink) || defined (__stub___readlink) readlink_will_always_fail_with_ENOSYS(); #else readlink(); #endif #if defined (__stub__set_output_format) || defined (__stub____set_output_format) _set_output_format_will_always_fail_with_ENOSYS(); #else _set_output_format(); #endif #if defined (__stub_PXFGETARG) || defined (__stub___PXFGETARG) PXFGETARG_will_always_fail_with_ENOSYS(); #else PXFGETARG(); #endif #if defined (__stub_sigaction) || defined (__stub___sigaction) sigaction_will_always_fail_with_ENOSYS(); #else sigaction(); #endif #if defined (__stub_strcasecmp) || defined (__stub___strcasecmp) strcasecmp_will_always_fail_with_ENOSYS(); #else strcasecmp(); #endif #if defined (__stub_dlopen) || defined (__stub___dlopen) dlopen_will_always_fail_with_ENOSYS(); #else dlopen(); #endif #if defined (__stub_drand48) || defined (__stub___drand48) drand48_will_always_fail_with_ENOSYS(); #else drand48(); #endif #if defined (__stub_socket) || defined (__stub___socket) socket_will_always_fail_with_ENOSYS(); #else socket(); #endif #if defined (__stub_memmove) || defined (__stub___memmove) memmove_will_always_fail_with_ENOSYS(); #else memmove(); #endif #if defined (__stub_signal) || defined (__stub___signal) signal_will_always_fail_with_ENOSYS(); #else signal(); #endif #if defined (__stub_popen) || defined (__stub___popen) popen_will_always_fail_with_ENOSYS(); #else popen(); #endif #if defined (__stub_getrusage) || defined (__stub___getrusage) getrusage_will_always_fail_with_ENOSYS(); #else getrusage(); #endif #if defined (__stub_times) || defined (__stub___times) times_will_always_fail_with_ENOSYS(); #else times(); #endif #if defined (__stub_time) || defined (__stub___time) time_will_always_fail_with_ENOSYS(); #else time(); #endif #if defined (__stub_sysctlbyname) || defined (__stub___sysctlbyname) sysctlbyname_will_always_fail_with_ENOSYS(); #else sysctlbyname(); #endif #if defined (__stub_stricmp) || defined (__stub___stricmp) stricmp_will_always_fail_with_ENOSYS(); #else stricmp(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o: In function `main': conftest.c:(.text+0x64): warning: the `getwd' function is dangerous and should not be used. conftest.c:(.text+0x1c): undefined reference to `_sleep' conftest.c:(.text+0x58): undefined reference to `_getcwd' conftest.c:(.text+0x7c): undefined reference to `_lseek' conftest.c:(.text+0x94): undefined reference to `_access' conftest.c:(.text+0xf4): undefined reference to `_snprintf' conftest.c:(.text+0x130): undefined reference to `sbreak' conftest.c:(.text+0x184): undefined reference to `_set_output_format' conftest.c:(.text+0x190): undefined reference to `PXFGETARG' conftest.c:(.text+0x220): undefined reference to `sysctlbyname' conftest.c:(.text+0x22c): undefined reference to `stricmp' Checking for functions [rand getdomainname realpath dlsym bzero uname usleep dlclose gethostname clock get_nprocs dlerror mkstemp fork getpagesize] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char rand(); char getdomainname(); char realpath(); char dlsym(); char bzero(); char uname(); char usleep(); char dlclose(); char gethostname(); char clock(); char get_nprocs(); char dlerror(); char mkstemp(); char fork(); char getpagesize(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_rand) || defined (__stub___rand) rand_will_always_fail_with_ENOSYS(); #else rand(); #endif #if defined (__stub_getdomainname) || defined (__stub___getdomainname) getdomainname_will_always_fail_with_ENOSYS(); #else getdomainname(); #endif #if defined (__stub_realpath) || defined (__stub___realpath) realpath_will_always_fail_with_ENOSYS(); #else realpath(); #endif #if defined (__stub_dlsym) || defined (__stub___dlsym) dlsym_will_always_fail_with_ENOSYS(); #else dlsym(); #endif #if defined (__stub_bzero) || defined (__stub___bzero) bzero_will_always_fail_with_ENOSYS(); #else bzero(); #endif #if defined (__stub_uname) || defined (__stub___uname) uname_will_always_fail_with_ENOSYS(); #else uname(); #endif #if defined (__stub_usleep) || defined (__stub___usleep) usleep_will_always_fail_with_ENOSYS(); #else usleep(); #endif #if defined (__stub_dlclose) || defined (__stub___dlclose) dlclose_will_always_fail_with_ENOSYS(); #else dlclose(); #endif #if defined (__stub_gethostname) || defined (__stub___gethostname) gethostname_will_always_fail_with_ENOSYS(); #else gethostname(); #endif #if defined (__stub_clock) || defined (__stub___clock) clock_will_always_fail_with_ENOSYS(); #else clock(); #endif #if defined (__stub_get_nprocs) || defined (__stub___get_nprocs) get_nprocs_will_always_fail_with_ENOSYS(); #else get_nprocs(); #endif #if defined (__stub_dlerror) || defined (__stub___dlerror) dlerror_will_always_fail_with_ENOSYS(); #else dlerror(); #endif #if defined (__stub_mkstemp) || defined (__stub___mkstemp) mkstemp_will_always_fail_with_ENOSYS(); #else mkstemp(); #endif #if defined (__stub_fork) || defined (__stub___fork) fork_will_always_fail_with_ENOSYS(); #else fork(); #endif #if defined (__stub_getpagesize) || defined (__stub___getpagesize) getpagesize_will_always_fail_with_ENOSYS(); #else getpagesize(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_RAND" to "1" Defined "HAVE_GETDOMAINNAME" to "1" Defined "HAVE_REALPATH" to "1" Defined "HAVE_DLSYM" to "1" Defined "HAVE_BZERO" to "1" Defined "HAVE_UNAME" to "1" Defined "HAVE_USLEEP" to "1" Defined "HAVE_DLCLOSE" to "1" Defined "HAVE_GETHOSTNAME" to "1" Defined "HAVE_CLOCK" to "1" Defined "HAVE_GET_NPROCS" to "1" Defined "HAVE_DLERROR" to "1" Defined "HAVE_MKSTEMP" to "1" Defined "HAVE_FORK" to "1" Defined "HAVE_GETPAGESIZE" to "1" Checking for functions [memalign sigset gethostbyname gettimeofday readlink sigaction strcasecmp dlopen drand48 socket memmove signal popen getrusage times time] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char memalign(); char sigset(); char gethostbyname(); char gettimeofday(); char readlink(); char sigaction(); char strcasecmp(); char dlopen(); char drand48(); char socket(); char memmove(); char signal(); char popen(); char getrusage(); char times(); char time(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_memalign) || defined (__stub___memalign) memalign_will_always_fail_with_ENOSYS(); #else memalign(); #endif #if defined (__stub_sigset) || defined (__stub___sigset) sigset_will_always_fail_with_ENOSYS(); #else sigset(); #endif #if defined (__stub_gethostbyname) || defined (__stub___gethostbyname) gethostbyname_will_always_fail_with_ENOSYS(); #else gethostbyname(); #endif #if defined (__stub_gettimeofday) || defined (__stub___gettimeofday) gettimeofday_will_always_fail_with_ENOSYS(); #else gettimeofday(); #endif #if defined (__stub_readlink) || defined (__stub___readlink) readlink_will_always_fail_with_ENOSYS(); #else readlink(); #endif #if defined (__stub_sigaction) || defined (__stub___sigaction) sigaction_will_always_fail_with_ENOSYS(); #else sigaction(); #endif #if defined (__stub_strcasecmp) || defined (__stub___strcasecmp) strcasecmp_will_always_fail_with_ENOSYS(); #else strcasecmp(); #endif #if defined (__stub_dlopen) || defined (__stub___dlopen) dlopen_will_always_fail_with_ENOSYS(); #else dlopen(); #endif #if defined (__stub_drand48) || defined (__stub___drand48) drand48_will_always_fail_with_ENOSYS(); #else drand48(); #endif #if defined (__stub_socket) || defined (__stub___socket) socket_will_always_fail_with_ENOSYS(); #else socket(); #endif #if defined (__stub_memmove) || defined (__stub___memmove) memmove_will_always_fail_with_ENOSYS(); #else memmove(); #endif #if defined (__stub_signal) || defined (__stub___signal) signal_will_always_fail_with_ENOSYS(); #else signal(); #endif #if defined (__stub_popen) || defined (__stub___popen) popen_will_always_fail_with_ENOSYS(); #else popen(); #endif #if defined (__stub_getrusage) || defined (__stub___getrusage) getrusage_will_always_fail_with_ENOSYS(); #else getrusage(); #endif #if defined (__stub_times) || defined (__stub___times) times_will_always_fail_with_ENOSYS(); #else times(); #endif #if defined (__stub_time) || defined (__stub___time) time_will_always_fail_with_ENOSYS(); #else time(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_MEMALIGN" to "1" Defined "HAVE_SIGSET" to "1" Defined "HAVE_GETHOSTBYNAME" to "1" Defined "HAVE_GETTIMEOFDAY" to "1" Defined "HAVE_READLINK" to "1" Defined "HAVE_SIGACTION" to "1" Defined "HAVE_STRCASECMP" to "1" Defined "HAVE_DLOPEN" to "1" Defined "HAVE_DRAND48" to "1" Defined "HAVE_SOCKET" to "1" Defined "HAVE_MEMMOVE" to "1" Defined "HAVE_SIGNAL" to "1" Defined "HAVE_POPEN" to "1" Defined "HAVE_GETRUSAGE" to "1" Defined "HAVE_TIMES" to "1" Defined "HAVE_TIME" to "1" Checking for functions [_sleep] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _sleep(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__sleep) || defined (__stub____sleep) _sleep_will_always_fail_with_ENOSYS(); #else _sleep(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `_sleep' Checking for functions [snprintf] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char snprintf(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_snprintf) || defined (__stub___snprintf) snprintf_will_always_fail_with_ENOSYS(); #else snprintf(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_SNPRINTF" to "1" Checking for functions [_getcwd] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _getcwd(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__getcwd) || defined (__stub____getcwd) _getcwd_will_always_fail_with_ENOSYS(); #else _getcwd(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `_getcwd' Checking for functions [getwd] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getwd(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_getwd) || defined (__stub___getwd) getwd_will_always_fail_with_ENOSYS(); #else getwd(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): warning: the `getwd' function is dangerous and should not be used. Defined "HAVE_GETWD" to "1" Checking for functions [_lseek] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _lseek(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__lseek) || defined (__stub____lseek) _lseek_will_always_fail_with_ENOSYS(); #else _lseek(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `_lseek' Checking for functions [sleep] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sleep(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_sleep) || defined (__stub___sleep) sleep_will_always_fail_with_ENOSYS(); #else sleep(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_SLEEP" to "1" Checking for functions [_access] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _access(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__access) || defined (__stub____access) _access_will_always_fail_with_ENOSYS(); #else _access(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `_access' Checking for functions [lseek] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char lseek(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_lseek) || defined (__stub___lseek) lseek_will_always_fail_with_ENOSYS(); #else lseek(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_LSEEK" to "1" Checking for functions [access] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char access(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_access) || defined (__stub___access) access_will_always_fail_with_ENOSYS(); #else access(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_ACCESS" to "1" Checking for functions [_snprintf] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _snprintf(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__snprintf) || defined (__stub____snprintf) _snprintf_will_always_fail_with_ENOSYS(); #else _snprintf(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `_snprintf' Checking for functions [sbreak] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sbreak(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_sbreak) || defined (__stub___sbreak) sbreak_will_always_fail_with_ENOSYS(); #else sbreak(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `sbreak' Checking for functions [getcwd] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getcwd(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_getcwd) || defined (__stub___getcwd) getcwd_will_always_fail_with_ENOSYS(); #else getcwd(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_GETCWD" to "1" Checking for functions [_set_output_format] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _set_output_format(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__set_output_format) || defined (__stub____set_output_format) _set_output_format_will_always_fail_with_ENOSYS(); #else _set_output_format(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `_set_output_format' Checking for functions [PXFGETARG] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char PXFGETARG(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_PXFGETARG) || defined (__stub___PXFGETARG) PXFGETARG_will_always_fail_with_ENOSYS(); #else PXFGETARG(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `PXFGETARG' Checking for functions [sysctlbyname] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sysctlbyname(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_sysctlbyname) || defined (__stub___sysctlbyname) sysctlbyname_will_always_fail_with_ENOSYS(); #else sysctlbyname(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `sysctlbyname' Checking for functions [stricmp] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char stricmp(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_stricmp) || defined (__stub___stricmp) stricmp_will_always_fail_with_ENOSYS(); #else stricmp(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `stricmp' ================================================================================ TEST configureMemorySize from config.utilities.getResidentSetSize(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/getResidentSetSize.py:31) TESTING: configureMemorySize from config.utilities.getResidentSetSize(config/BuildSystem/config/utilities/getResidentSetSize.py:31) Try to determine how to measure the memory usage Defined "USE_PROC_FOR_SIZE" to "1" Using /proc for PetscMemoryGetCurrentUsage() ================================================================================ TEST configureFortranCommandLine from config.utilities.fortranCommandLine(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/fortranCommandLine.py:27) TESTING: configureFortranCommandLine from config.utilities.fortranCommandLine(config/BuildSystem/config/utilities/fortranCommandLine.py:27) Check for the mechanism to retrieve command line arguments in Fortran Pushing language FC Checking for functions [] in library [''] [] Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.F Possible ERROR while running compiler: stderr: Fortran diagnostic messages: program name(main) jwd2005i-w "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.F", line 4: 'i' is used but never set. Source: program main integer i character*(80) arg call get_command_argument(i,arg) end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language FC Defined "HAVE_FORTRAN_GET_COMMAND_ARGUMENT" to "1" Popping language FC Pushing language C Checking for functions [get_command_argument_] in library [''] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char get_command_argument_(); static void _check_get_command_argument_() { get_command_argument_(); } int main() { _check_get_command_argument_();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o: In function `_check_get_command_argument_': conftest.c:(.text+0x4): undefined reference to `get_command_argument_' Popping language C Checking for functions [getarg_] in library [''] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char getarg_(); static void _check_getarg_() { getarg_(); } int main() { _check_getarg_();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o: In function `_check_getarg_': conftest.c:(.text+0x4): undefined reference to `getarg_' Popping language C Checking for functions [ipxfargc_] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char ipxfargc_(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_ipxfargc_) || defined (__stub___ipxfargc_) ipxfargc__will_always_fail_with_ENOSYS(); #else ipxfargc_(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `ipxfargc_' Checking for functions [f90_unix_MP_iargc] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char f90_unix_MP_iargc(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_f90_unix_MP_iargc) || defined (__stub___f90_unix_MP_iargc) f90_unix_MP_iargc_will_always_fail_with_ENOSYS(); #else f90_unix_MP_iargc(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `f90_unix_MP_iargc' Checking for functions [PXFGETARG] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char PXFGETARG(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_PXFGETARG) || defined (__stub___PXFGETARG) PXFGETARG_will_always_fail_with_ENOSYS(); #else PXFGETARG(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `PXFGETARG' Checking for functions [iargc_] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char iargc_(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_iargc_) || defined (__stub___iargc_) iargc__will_always_fail_with_ENOSYS(); #else iargc_(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `iargc_' Checking for functions [GETARG at 16] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Possible ERROR while running compiler: exit code 512 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c", line 13: error: unrecognized token char GETARG at 16(); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c", line 13: error: expected a ";" char GETARG at 16(); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c", line 21: error: unrecognized token #if defined (__stub_GETARG at 16) || defined (__stub___GETARG at 16) ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c", line 21: error: expected a ")" #if defined (__stub_GETARG at 16) || defined (__stub___GETARG at 16) ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c", line 21: error: extra text after expected end of preprocessing directive #if defined (__stub_GETARG at 16) || defined (__stub___GETARG at 16) ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c", line 24: error: unrecognized token GETARG at 16(); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c", line 24: warning: expression has no effect GETARG at 16(); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c", line 24: error: expected a ";" GETARG at 16(); ^ 7 errors detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c". Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char GETARG at 16(); #ifdef __cplusplus } #endif int main() { #if defined (__stub_GETARG at 16) || defined (__stub___GETARG at 16) GETARG at 16_will_always_fail_with_ENOSYS(); #else GETARG at 16(); #endif ; return 0; } Compile failed inside link Checking for functions [_gfortran_iargc] Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully no other prototypes since they would conflict with our 'char funcname()' declaration below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ #ifdef __cplusplus extern "C" { #endif /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _gfortran_iargc(); #ifdef __cplusplus } #endif int main() { #if defined (__stub__gfortran_iargc) || defined (__stub____gfortran_iargc) _gfortran_iargc_will_always_fail_with_ENOSYS(); #else _gfortran_iargc(); #endif ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions/conftest.o: In function `main': conftest.c:(.text+0x4): undefined reference to `_gfortran_iargc' Popping language C ================================================================================ TEST configureFeatureTestMacros from config.utilities.featureTestMacros(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/featureTestMacros.py:13) TESTING: configureFeatureTestMacros from config.utilities.featureTestMacros(config/BuildSystem/config/utilities/featureTestMacros.py:13) Checks if certain feature test macros are support All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros/conftest.c", line 4: catastrophic error: cannot open source file "sysctl.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" #define _POSIX_C_SOURCE 200112L #include int main() { ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #define _BSD_SOURCE #include int main() { ; return 0; } Defined "_BSD_SOURCE" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #define _DEFAULT_SOURCE #include int main() { ; return 0; } Defined "_DEFAULT_SOURCE" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #define _GNU_SOURCE #include int main() { cpu_set_t mset; CPU_ZERO(&mset);; return 0; } Defined "_GNU_SOURCE" to "1" ================================================================================ TEST configureMissingDefines from config.utilities.missing(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/missing.py:57) TESTING: configureMissingDefines from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:57) Checks for limits All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_LIMITS_H #include #endif int main() { int i=INT_MAX; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_FLOAT_H #include #endif int main() { double d=DBL_MAX; if (d); ; return 0; } ================================================================================ TEST configureMissingUtypeTypedefs from config.utilities.missing(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/missing.py:67) TESTING: configureMissingUtypeTypedefs from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:67) Checks if u_short is undefined Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c", line 6: warning: variable "foo" was declared but never referenced u_short foo; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { u_short foo; ; return 0; } ================================================================================ TEST configureMissingFunctions from config.utilities.missing(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/missing.py:73) TESTING: configureMissingFunctions from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:73) Checks for SOCKETS ================================================================================ TEST configureMissingSignals from config.utilities.missing(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/missing.py:93) TESTING: configureMissingSignals from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:93) Check for missing signals, and define MISSING_ if necessary Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGABRT; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGALRM; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGBUS; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGCHLD; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGCONT; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGFPE; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGHUP; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGILL; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGINT; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGKILL; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGPIPE; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGQUIT; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGSEGV; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGSTOP; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGSYS; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGTERM; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGTRAP; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGTSTP; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGURG; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGUSR1; if (i); ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGUSR2; if (i); ; return 0; } ================================================================================ TEST configureMissingGetdomainnamePrototype from config.utilities.missing(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/missing.py:110) TESTING: configureMissingGetdomainnamePrototype from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:110) Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #if !defined(_BSD_SOURCE) #define _BSD_SOURCE #endif #if !defined(_DEFAULT_SOURCE) #define _DEFAULT_SOURCE #endif #if !defined(_GNU_SOURCE) #define _GNU_SOURCE #endif #ifdef PETSC_HAVE_UNISTD_H #include #endif #ifdef PETSC_HAVE_NETDB_H #include #endif int main() { int (*getdomainname_ptr)(char*,size_t) = getdomainname; char test[10]; if (getdomainname_ptr(test,10)) return 1; ; return 0; } Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #if !defined(_BSD_SOURCE) #define _BSD_SOURCE #endif #if !defined(_DEFAULT_SOURCE) #define _DEFAULT_SOURCE #endif #if !defined(_GNU_SOURCE) #define _GNU_SOURCE #endif #ifdef PETSC_HAVE_UNISTD_H #include #endif #ifdef PETSC_HAVE_NETDB_H #include #endif int main() { int (*getdomainname_ptr)(char*,size_t) = getdomainname; char test[10]; if (getdomainname_ptr(test,10)) return 1; ; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language Cxx ================================================================================ TEST configureMissingSrandPrototype from config.utilities.missing(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/missing.py:135) TESTING: configureMissingSrandPrototype from config.utilities.missing(config/BuildSystem/config/utilities/missing.py:135) Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #if !defined(_BSD_SOURCE) #define _BSD_SOURCE #endif #if !defined(_DEFAULT_SOURCE) #define _DEFAULT_SOURCE #endif #if !defined(_GNU_SOURCE) #define _GNU_SOURCE #endif #ifdef PETSC_HAVE_STDLIB_H #include #endif int main() { double (*drand48_ptr)(void) = drand48; void (*srand48_ptr)(long int) = srand48; long int seed=10; srand48_ptr(seed); if (drand48_ptr() > 0.5) return 1; ; return 0; } Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #if !defined(_BSD_SOURCE) #define _BSD_SOURCE #endif #if !defined(_DEFAULT_SOURCE) #define _DEFAULT_SOURCE #endif #if !defined(_GNU_SOURCE) #define _GNU_SOURCE #endif #ifdef PETSC_HAVE_STDLIB_H #include #endif int main() { double (*drand48_ptr)(void) = drand48; void (*srand48_ptr)(long int) = srand48; long int seed=10; srand48_ptr(seed); if (drand48_ptr() > 0.5) return 1; ; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language Cxx ================================================================================ TEST configureFPTrap from config.utilities.FPTrap(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/utilities/FPTrap.py:27) TESTING: configureFPTrap from config.utilities.FPTrap(config/BuildSystem/config/utilities/FPTrap.py:27) Checking the handling of floating point traps Checking for header: sigfpe.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "sigfpe.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "sigfpe.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "sigfpe.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c".: Checking for header: fpxcp.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "fpxcp.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "fpxcp.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "fpxcp.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c".: Checking for header: floatingpoint.h Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "floatingpoint.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "floatingpoint.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "floatingpoint.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c".: ================================================================================ TEST configureMkdir from config.programs(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/programs.py:22) TESTING: configureMkdir from config.programs(config/BuildSystem/config/programs.py:22) Make sure we can have mkdir automatically make intermediate directories Checking for program /opt/FJSVtclang/check/mkdir...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/mkdir...not found Checking for program /opt/kusu/bin/mkdir...not found Checking for program /opt/kusu/sbin/mkdir...not found Checking for program /usr/pgsql-9.0/bin/mkdir...not found Checking for program /usr/local/bin/mkdir...not found Checking for program /bin/mkdir...found Executing: /bin/mkdir -p .conftest/tmp Adding -p flag to /bin/mkdir -p to automatically create directories Defined make macro "MKDIR" to "/bin/mkdir -p" ================================================================================ TEST configureAutoreconf from config.programs(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/programs.py:44) TESTING: configureAutoreconf from config.programs(config/BuildSystem/config/programs.py:44) Check for autoreconf Checking for program /opt/FJSVtclang/check/autoreconf...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/autoreconf...not found Checking for program /opt/kusu/bin/autoreconf...not found Checking for program /opt/kusu/sbin/autoreconf...not found Checking for program /usr/pgsql-9.0/bin/autoreconf...not found Checking for program /usr/local/bin/autoreconf...not found Checking for program /bin/autoreconf...not found Checking for program /usr/bin/autoreconf...found All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.programs Executing: cd /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.programs/autoconfdir&&/usr/bin/autoreconf autoreconf test successful! ================================================================================ TEST configurePrograms from config.programs(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/programs.py:66) TESTING: configurePrograms from config.programs(config/BuildSystem/config/programs.py:66) Check for the programs needed to build and run PETSc Checking for program /opt/FJSVtclang/check/sh...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/sh...not found Checking for program /opt/kusu/bin/sh...not found Checking for program /opt/kusu/sbin/sh...not found Checking for program /usr/pgsql-9.0/bin/sh...not found Checking for program /usr/local/bin/sh...not found Checking for program /bin/sh...found Defined make macro "SHELL" to "/bin/sh" Checking for program /opt/FJSVtclang/check/sed...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/sed...not found Checking for program /opt/kusu/bin/sed...not found Checking for program /opt/kusu/sbin/sed...not found Checking for program /usr/pgsql-9.0/bin/sed...not found Checking for program /usr/local/bin/sed...not found Checking for program /bin/sed...found Defined make macro "SED" to "/bin/sed" Executing: /bin/sed -i s/sed/sd/g "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.programs/sed1" Adding SEDINPLACE cmd: /bin/sed -i Defined make macro "SEDINPLACE" to "/bin/sed -i" Checking for program /opt/FJSVtclang/check/mv...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/mv...not found Checking for program /opt/kusu/bin/mv...not found Checking for program /opt/kusu/sbin/mv...not found Checking for program /usr/pgsql-9.0/bin/mv...not found Checking for program /usr/local/bin/mv...not found Checking for program /bin/mv...found Defined make macro "MV" to "/bin/mv" Checking for program /opt/FJSVtclang/check/cp...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/cp...not found Checking for program /opt/kusu/bin/cp...not found Checking for program /opt/kusu/sbin/cp...not found Checking for program /usr/pgsql-9.0/bin/cp...not found Checking for program /usr/local/bin/cp...not found Checking for program /bin/cp...found Defined make macro "CP" to "/bin/cp" Checking for program /opt/FJSVtclang/check/grep...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/grep...not found Checking for program /opt/kusu/bin/grep...not found Checking for program /opt/kusu/sbin/grep...not found Checking for program /usr/pgsql-9.0/bin/grep...not found Checking for program /usr/local/bin/grep...not found Checking for program /bin/grep...found Defined make macro "GREP" to "/bin/grep" Checking for program /opt/FJSVtclang/check/rm...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/rm...not found Checking for program /opt/kusu/bin/rm...not found Checking for program /opt/kusu/sbin/rm...not found Checking for program /usr/pgsql-9.0/bin/rm...not found Checking for program /usr/local/bin/rm...not found Checking for program /bin/rm...found Defined make macro "RM" to "/bin/rm -f" Checking for program /opt/FJSVtclang/check/diff...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/diff...not found Checking for program /opt/kusu/bin/diff...not found Checking for program /opt/kusu/sbin/diff...not found Checking for program /usr/pgsql-9.0/bin/diff...not found Checking for program /usr/local/bin/diff...not found Checking for program /bin/diff...not found Checking for program /usr/bin/diff...found Executing: "/usr/bin/diff" -w "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.programs/diff1" "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.programs/diff2" Defined make macro "DIFF" to "/usr/bin/diff -w" Checking for program /usr/ucb/ps...not found Checking for program /usr/usb/ps...not found Checking for program /home/hp150306/t00196/ps...not found Checking for program /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/bin/win32fe/ps...not found Checking for program /opt/FJSVtclang/check/gzip...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/gzip...not found Checking for program /opt/kusu/bin/gzip...not found Checking for program /opt/kusu/sbin/gzip...not found Checking for program /usr/pgsql-9.0/bin/gzip...not found Checking for program /usr/local/bin/gzip...not found Checking for program /bin/gzip...found Defined make macro "GZIP" to "/bin/gzip" Defined "HAVE_GZIP" to "1" Defined make macro "PYTHON" to "/usr/bin/python" ================================================================================ TEST configureMake from config.packages.make(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/make.py:66) TESTING: configureMake from config.packages.make(config/BuildSystem/config/packages/make.py:66) Check for user specified make - or gmake, make Checking for program /opt/FJSVtclang/check/gmake...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/gmake...not found Checking for program /opt/kusu/bin/gmake...not found Checking for program /opt/kusu/sbin/gmake...not found Checking for program /usr/pgsql-9.0/bin/gmake...not found Checking for program /usr/local/bin/gmake...not found Checking for program /bin/gmake...not found Checking for program /usr/bin/gmake...found Defined make macro "MAKE" to "/usr/bin/gmake" ================================================================================ TEST configureCheckGNUMake from config.packages.make(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/make.py:84) TESTING: configureCheckGNUMake from config.packages.make(config/BuildSystem/config/packages/make.py:84) Check for GNU make Executing: /usr/bin/gmake --version stdout: GNU Make 3.81 Copyright (C) 2006 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. This program built for sparc64-unknown-linux-gnu Defined make macro "MAKE_IS_GNUMAKE" to "1" Defined make rule "libc" with dependencies "${LIBNAME}(${OBJSC})" and code [] Defined make rule "libcxx" with dependencies "${LIBNAME}(${OBJSCXX})" and code [] Defined make rule "libcu" with dependencies "${LIBNAME}(${OBJSCU})" and code [] Defined make rule "libf" with dependencies "${OBJSF}" and code -${AR} ${AR_FLAGS} ${LIBNAME} ${OBJSF} ================================================================================ TEST configureMakeNP from config.packages.make(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/make.py:119) TESTING: configureMakeNP from config.packages.make(config/BuildSystem/config/packages/make.py:119) check no of cores on the build machine [perhaps to do make '-j ncores'] module multiprocessing found 8 cores: using make_np = 7 Defined make macro "MAKE_NP" to "7" Defined make macro "OMAKE_PRINTDIR " to "/usr/bin/gmake --print-directory" Defined make macro "OMAKE" to "/usr/bin/gmake --no-print-directory" ================================================================================ TEST alternateConfigureLibrary from config.packages.OpenMPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.OpenMPI(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.MPICH(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.MPICH(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default Pushing language C ================================================================================ TEST configureLibrary from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:476) TESTING: configureLibrary from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:476) Calls the regular package configureLibrary and then does an additional test needed by MPI ================================================================================== Checking for a functional MPI Checking for library in Compiler specific search MPI: [] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [MPI_Init MPI_Comm_create] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Init(); static void _check_MPI_Init() { MPI_Init(); } char MPI_Comm_create(); static void _check_MPI_Comm_create() { MPI_Comm_create(); } int main() { _check_MPI_Init(); _check_MPI_Comm_create();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Checking for headers Compiler specific search MPI: [] Pushing language C ================================================================================ TEST checkInclude from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['mpi.h'] in [] Checking include with compiler flags var CPPFLAGS [] Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 212 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef long ptrdiff_t; #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef int wchar_t; #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 225 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 1 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi_portable_platform.h" #line 343 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi_portable_platform.h" #line 386 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi_portable_platform.h" #line 258 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 278 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" typedef ptrdiff_t MPI_Aint; typedef long long MPI_Offset; typedef struct ompi_communicator_t *MPI_Comm; typedef struct ompi_datatype_t *MPI_Datatype; typedef struct ompi_errhandler_t *MPI_Errhandler; typedef struct ompi_file_t *MPI_File; typedef struct ompi_group_t *MPI_Group; typedef struct ompi_info_t *MPI_Info; typedef struct ompi_op_t *MPI_Op; typedef struct ompi_request_t *MPI_Request; typedef struct ompi_message_t *MPI_Message; typedef struct ompi_status_public_t MPI_Status; typedef struct ompi_win_t *MPI_Win; #pragma pack(4) struct ompi_status_public_t { int MPI_SOURCE; int MPI_TAG; int MPI_ERROR; unsigned long _cancelled : 1; unsigned long _ucount : 63; }; #pragma pack() typedef struct ompi_status_public_t ompi_status_public_t; typedef int (MPI_Copy_function)(MPI_Comm, int, void *, void *, void *, int *); typedef int (MPI_Delete_function)(MPI_Comm, int, void *, void *); typedef int (MPI_Datarep_extent_function)(MPI_Datatype, MPI_Aint *, void *); typedef int (MPI_Datarep_conversion_function)(void *, MPI_Datatype, int, void *, MPI_Offset, void *); typedef void (MPI_Comm_errhandler_function)(MPI_Comm *, int *, ...); typedef MPI_Comm_errhandler_function MPI_Comm_errhandler_fn ; typedef void (ompi_file_errhandler_fn)(MPI_File *, int *, ...); typedef ompi_file_errhandler_fn MPI_File_errhandler_fn ; typedef ompi_file_errhandler_fn MPI_File_errhandler_function; typedef void (MPI_Win_errhandler_function)(MPI_Win *, int *, ...); typedef MPI_Win_errhandler_function MPI_Win_errhandler_fn ; typedef void (MPI_Handler_function)(MPI_Comm *, int *, ...); typedef void (MPI_User_function)(void *, void *, int *, MPI_Datatype *); typedef int (MPI_Comm_copy_attr_function)(MPI_Comm, int, void *, void *, void *, int *); typedef int (MPI_Comm_delete_attr_function)(MPI_Comm, int, void *, void *); typedef int (MPI_Type_copy_attr_function)(MPI_Datatype, int, void *, void *, void *, int *); typedef int (MPI_Type_delete_attr_function)(MPI_Datatype, int, void *, void *); typedef int (MPI_Win_copy_attr_function)(MPI_Win, int, void *, void *, void *, int *); typedef int (MPI_Win_delete_attr_function)(MPI_Win, int, void *, void *); typedef int (MPI_Grequest_query_function)(void *, MPI_Status *); typedef int (MPI_Grequest_free_function)(void *); typedef int (MPI_Grequest_cancel_function)(void *, int); #line 432 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 453 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 469 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" enum { MPI_TAG_UB, MPI_HOST, MPI_IO, MPI_WTIME_IS_GLOBAL, MPI_APPNUM, MPI_LASTUSEDCODE, MPI_UNIVERSE_SIZE, MPI_WIN_BASE, MPI_WIN_SIZE, MPI_WIN_DISP_UNIT, IMPI_CLIENT_SIZE, IMPI_CLIENT_COLOR, IMPI_HOST_SIZE, IMPI_HOST_COLOR }; #line 582 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" enum { MPI_IDENT, MPI_CONGRUENT, MPI_SIMILAR, MPI_UNEQUAL }; enum { MPI_THREAD_SINGLE, MPI_THREAD_FUNNELED, MPI_THREAD_SERIALIZED, MPI_THREAD_MULTIPLE }; enum { MPI_COMBINER_NAMED, MPI_COMBINER_DUP, MPI_COMBINER_CONTIGUOUS, MPI_COMBINER_VECTOR, MPI_COMBINER_HVECTOR_INTEGER, MPI_COMBINER_HVECTOR, MPI_COMBINER_INDEXED, MPI_COMBINER_HINDEXED_INTEGER, MPI_COMBINER_HINDEXED, MPI_COMBINER_INDEXED_BLOCK, MPI_COMBINER_STRUCT_INTEGER, MPI_COMBINER_STRUCT, MPI_COMBINER_SUBARRAY, MPI_COMBINER_DARRAY, MPI_COMBINER_F90_REAL, MPI_COMBINER_F90_COMPLEX, MPI_COMBINER_F90_INTEGER, MPI_COMBINER_RESIZED, MPI_COMBINER_HINDEXED_BLOCK }; #line 649 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" int OMPI_C_MPI_TYPE_NULL_DELETE_FN( MPI_Datatype datatype, int type_keyval, void* attribute_val_out, void* extra_state ); int OMPI_C_MPI_TYPE_NULL_COPY_FN( MPI_Datatype datatype, int type_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); int OMPI_C_MPI_TYPE_DUP_FN( MPI_Datatype datatype, int type_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); int OMPI_C_MPI_COMM_NULL_DELETE_FN( MPI_Comm comm, int comm_keyval, void* attribute_val_out, void* extra_state ); int OMPI_C_MPI_COMM_NULL_COPY_FN( MPI_Comm comm, int comm_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); int OMPI_C_MPI_COMM_DUP_FN( MPI_Comm comm, int comm_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); int OMPI_C_MPI_NULL_DELETE_FN( MPI_Comm comm, int comm_keyval, void* attribute_val_out, void* extra_state ) ; int OMPI_C_MPI_NULL_COPY_FN( MPI_Comm comm, int comm_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ) ; int OMPI_C_MPI_DUP_FN( MPI_Comm comm, int comm_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ) ; int OMPI_C_MPI_WIN_NULL_DELETE_FN( MPI_Win window, int win_keyval, void* attribute_val_out, void* extra_state ); int OMPI_C_MPI_WIN_NULL_COPY_FN( MPI_Win window, int win_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); int OMPI_C_MPI_WIN_DUP_FN( MPI_Win window, int win_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); extern struct ompi_predefined_communicator_t ompi_mpi_comm_world; extern struct ompi_predefined_communicator_t ompi_mpi_comm_self; extern struct ompi_predefined_communicator_t ompi_mpi_comm_null; extern struct ompi_predefined_group_t ompi_mpi_group_empty; extern struct ompi_predefined_group_t ompi_mpi_group_null; extern struct ompi_predefined_request_t ompi_request_null; extern struct ompi_predefined_message_t ompi_message_null; extern struct ompi_predefined_message_t ompi_message_no_proc; extern struct ompi_predefined_op_t ompi_mpi_op_null; extern struct ompi_predefined_op_t ompi_mpi_op_min; extern struct ompi_predefined_op_t ompi_mpi_op_max; extern struct ompi_predefined_op_t ompi_mpi_op_sum; extern struct ompi_predefined_op_t ompi_mpi_op_prod; extern struct ompi_predefined_op_t ompi_mpi_op_land; extern struct ompi_predefined_op_t ompi_mpi_op_band; extern struct ompi_predefined_op_t ompi_mpi_op_lor; extern struct ompi_predefined_op_t ompi_mpi_op_bor; extern struct ompi_predefined_op_t ompi_mpi_op_lxor; extern struct ompi_predefined_op_t ompi_mpi_op_bxor; extern struct ompi_predefined_op_t ompi_mpi_op_maxloc; extern struct ompi_predefined_op_t ompi_mpi_op_minloc; extern struct ompi_predefined_op_t ompi_mpi_op_replace; extern struct ompi_predefined_datatype_t ompi_mpi_datatype_null; extern struct ompi_predefined_datatype_t ompi_mpi_lb ; extern struct ompi_predefined_datatype_t ompi_mpi_ub ; extern struct ompi_predefined_datatype_t ompi_mpi_char; extern struct ompi_predefined_datatype_t ompi_mpi_signed_char; extern struct ompi_predefined_datatype_t ompi_mpi_unsigned_char; extern struct ompi_predefined_datatype_t ompi_mpi_byte; extern struct ompi_predefined_datatype_t ompi_mpi_short; extern struct ompi_predefined_datatype_t ompi_mpi_unsigned_short; extern struct ompi_predefined_datatype_t ompi_mpi_int; extern struct ompi_predefined_datatype_t ompi_mpi_unsigned; extern struct ompi_predefined_datatype_t ompi_mpi_long; extern struct ompi_predefined_datatype_t ompi_mpi_unsigned_long; extern struct ompi_predefined_datatype_t ompi_mpi_long_long_int; extern struct ompi_predefined_datatype_t ompi_mpi_unsigned_long_long; extern struct ompi_predefined_datatype_t ompi_mpi_float; extern struct ompi_predefined_datatype_t ompi_mpi_double; extern struct ompi_predefined_datatype_t ompi_mpi_long_double; extern struct ompi_predefined_datatype_t ompi_mpi_wchar; extern struct ompi_predefined_datatype_t ompi_mpi_packed; extern struct ompi_predefined_datatype_t ompi_mpi_cxx_bool; extern struct ompi_predefined_datatype_t ompi_mpi_cxx_cplex; extern struct ompi_predefined_datatype_t ompi_mpi_cxx_dblcplex; extern struct ompi_predefined_datatype_t ompi_mpi_cxx_ldblcplex; extern struct ompi_predefined_datatype_t ompi_mpi_logic; extern struct ompi_predefined_datatype_t ompi_mpi_character; extern struct ompi_predefined_datatype_t ompi_mpi_integer; extern struct ompi_predefined_datatype_t ompi_mpi_real; extern struct ompi_predefined_datatype_t ompi_mpi_dblprec; extern struct ompi_predefined_datatype_t ompi_mpi_cplex; extern struct ompi_predefined_datatype_t ompi_mpi_dblcplex; extern struct ompi_predefined_datatype_t ompi_mpi_ldblcplex; extern struct ompi_predefined_datatype_t ompi_mpi_2int; extern struct ompi_predefined_datatype_t ompi_mpi_2integer; extern struct ompi_predefined_datatype_t ompi_mpi_2real; extern struct ompi_predefined_datatype_t ompi_mpi_2dblprec; extern struct ompi_predefined_datatype_t ompi_mpi_2cplex; extern struct ompi_predefined_datatype_t ompi_mpi_2dblcplex; extern struct ompi_predefined_datatype_t ompi_mpi_float_int; extern struct ompi_predefined_datatype_t ompi_mpi_double_int; extern struct ompi_predefined_datatype_t ompi_mpi_longdbl_int; extern struct ompi_predefined_datatype_t ompi_mpi_short_int; extern struct ompi_predefined_datatype_t ompi_mpi_long_int; extern struct ompi_predefined_datatype_t ompi_mpi_logical1; extern struct ompi_predefined_datatype_t ompi_mpi_logical2; extern struct ompi_predefined_datatype_t ompi_mpi_logical4; extern struct ompi_predefined_datatype_t ompi_mpi_logical8; extern struct ompi_predefined_datatype_t ompi_mpi_integer1; extern struct ompi_predefined_datatype_t ompi_mpi_integer2; extern struct ompi_predefined_datatype_t ompi_mpi_integer4; extern struct ompi_predefined_datatype_t ompi_mpi_integer8; extern struct ompi_predefined_datatype_t ompi_mpi_integer16; extern struct ompi_predefined_datatype_t ompi_mpi_real2; extern struct ompi_predefined_datatype_t ompi_mpi_real4; extern struct ompi_predefined_datatype_t ompi_mpi_real8; extern struct ompi_predefined_datatype_t ompi_mpi_real16; extern struct ompi_predefined_datatype_t ompi_mpi_complex8; extern struct ompi_predefined_datatype_t ompi_mpi_complex16; extern struct ompi_predefined_datatype_t ompi_mpi_complex32; extern struct ompi_predefined_datatype_t ompi_mpi_int8_t; extern struct ompi_predefined_datatype_t ompi_mpi_uint8_t; extern struct ompi_predefined_datatype_t ompi_mpi_int16_t; extern struct ompi_predefined_datatype_t ompi_mpi_uint16_t; extern struct ompi_predefined_datatype_t ompi_mpi_int32_t; extern struct ompi_predefined_datatype_t ompi_mpi_uint32_t; extern struct ompi_predefined_datatype_t ompi_mpi_int64_t; extern struct ompi_predefined_datatype_t ompi_mpi_uint64_t; extern struct ompi_predefined_datatype_t ompi_mpi_aint; extern struct ompi_predefined_datatype_t ompi_mpi_offset; extern struct ompi_predefined_datatype_t ompi_mpi_c_bool; extern struct ompi_predefined_datatype_t ompi_mpi_c_complex; extern struct ompi_predefined_datatype_t ompi_mpi_c_float_complex; extern struct ompi_predefined_datatype_t ompi_mpi_c_double_complex; extern struct ompi_predefined_datatype_t ompi_mpi_c_long_double_complex; extern struct ompi_predefined_errhandler_t ompi_mpi_errhandler_null; extern struct ompi_predefined_errhandler_t ompi_mpi_errors_are_fatal; extern struct ompi_predefined_errhandler_t ompi_mpi_errors_return; extern struct ompi_predefined_win_t ompi_mpi_win_null; extern struct ompi_predefined_file_t ompi_mpi_file_null; extern struct ompi_predefined_info_t ompi_mpi_info_null; extern int *MPI_F_STATUS_IGNORE; extern int *MPI_F_STATUSES_IGNORE; #line 921 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 954 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 1011 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 1038 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" int MPI_Abort(MPI_Comm comm, int errorcode); int MPI_Accumulate(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Op op, MPI_Win win); int MPI_Add_error_class(int *errorclass); int MPI_Add_error_code(int errorclass, int *errorcode); int MPI_Add_error_string(int errorcode, char *string); int MPI_Address(void *location, MPI_Aint *address) ; int MPI_Allgather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm); int MPI_Iallgather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int MPI_Allgatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, MPI_Comm comm); int MPI_Iallgatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int MPI_Alloc_mem(MPI_Aint size, MPI_Info info, void *baseptr); int MPI_Allreduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int MPI_Iallreduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int MPI_Alltoall(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm); int MPI_Ialltoall(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int MPI_Alltoallv(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype recvtype, MPI_Comm comm); int MPI_Ialltoallv(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int MPI_Alltoallw(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype *sendtypes, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype *recvtypes, MPI_Comm comm); int MPI_Ialltoallw(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype *sendtypes, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype *recvtypes, MPI_Comm comm, MPI_Request *request); int MPI_Attr_delete(MPI_Comm comm, int keyval) ; int MPI_Attr_get(MPI_Comm comm, int keyval, void *attribute_val, int *flag) ; int MPI_Attr_put(MPI_Comm comm, int keyval, void *attribute_val) ; int MPI_Barrier(MPI_Comm comm); int MPI_Ibarrier(MPI_Comm comm, MPI_Request *request); int MPI_Bcast(void *buffer, int count, MPI_Datatype datatype, int root, MPI_Comm comm); int MPI_Bsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int MPI_Ibcast(void *buffer, int count, MPI_Datatype datatype, int root, MPI_Comm comm, MPI_Request *request); int MPI_Bsend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Buffer_attach(void *buffer, int size); int MPI_Buffer_detach(void *buffer, int *size); int MPI_Cancel(MPI_Request *request); int MPI_Cart_coords(MPI_Comm comm, int rank, int maxdims, int *coords); int MPI_Cart_create(MPI_Comm old_comm, int ndims, int *dims, int *periods, int reorder, MPI_Comm *comm_cart); int MPI_Cart_get(MPI_Comm comm, int maxdims, int *dims, int *periods, int *coords); int MPI_Cart_map(MPI_Comm comm, int ndims, int *dims, int *periods, int *newrank); int MPI_Cart_rank(MPI_Comm comm, int *coords, int *rank); int MPI_Cart_shift(MPI_Comm comm, int direction, int disp, int *rank_source, int *rank_dest); int MPI_Cart_sub(MPI_Comm comm, int *remain_dims, MPI_Comm *new_comm); int MPI_Cartdim_get(MPI_Comm comm, int *ndims); int MPI_Close_port(char *port_name); int MPI_Comm_accept(char *port_name, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *newcomm); int MPI_Comm_c2f(MPI_Comm comm); int MPI_Comm_call_errhandler(MPI_Comm comm, int errorcode); int MPI_Comm_compare(MPI_Comm comm1, MPI_Comm comm2, int *result); int MPI_Comm_connect(char *port_name, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *newcomm); int MPI_Comm_create_errhandler(MPI_Comm_errhandler_function *function, MPI_Errhandler *errhandler); int MPI_Comm_create_keyval(MPI_Comm_copy_attr_function *comm_copy_attr_fn, MPI_Comm_delete_attr_function *comm_delete_attr_fn, int *comm_keyval, void *extra_state); int MPI_Comm_create(MPI_Comm comm, MPI_Group group, MPI_Comm *newcomm); int MPI_Comm_delete_attr(MPI_Comm comm, int comm_keyval); int MPI_Comm_disconnect(MPI_Comm *comm); int MPI_Comm_dup(MPI_Comm comm, MPI_Comm *newcomm); MPI_Comm MPI_Comm_f2c(int comm); int MPI_Comm_free_keyval(int *comm_keyval); int MPI_Comm_free(MPI_Comm *comm); int MPI_Comm_get_attr(MPI_Comm comm, int comm_keyval, void *attribute_val, int *flag); int MPI_Dist_graph_create(MPI_Comm comm_old, int n, int nodes[], int degrees[], int targets[], int weights[], MPI_Info info, int reorder, MPI_Comm * newcomm); int MPI_Dist_graph_create_adjacent(MPI_Comm comm_old, int indegree, int sources[], int sourceweights[], int outdegree, int destinations[], int destweights[], MPI_Info info, int reorder, MPI_Comm *comm_dist_graph); int MPI_Dist_graph_neighbors(MPI_Comm comm, int maxindegree, int sources[], int sourceweights[], int maxoutdegree, int destinations[], int destweights[]); int MPI_Dist_graph_neighbors_count(MPI_Comm comm, int *inneighbors, int *outneighbors, int *weighted); int MPI_Comm_get_errhandler(MPI_Comm comm, MPI_Errhandler *erhandler); int MPI_Comm_get_name(MPI_Comm comm, char *comm_name, int *resultlen); int MPI_Comm_get_parent(MPI_Comm *parent); int MPI_Comm_group(MPI_Comm comm, MPI_Group *group); int MPI_Comm_join(int fd, MPI_Comm *intercomm); int MPI_Comm_rank(MPI_Comm comm, int *rank); int MPI_Comm_remote_group(MPI_Comm comm, MPI_Group *group); int MPI_Comm_remote_size(MPI_Comm comm, int *size); int MPI_Comm_set_attr(MPI_Comm comm, int comm_keyval, void *attribute_val); int MPI_Comm_set_errhandler(MPI_Comm comm, MPI_Errhandler errhandler); int MPI_Comm_set_name(MPI_Comm comm, char *comm_name); int MPI_Comm_size(MPI_Comm comm, int *size); int MPI_Comm_spawn(char *command, char **argv, int maxprocs, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *intercomm, int *array_of_errcodes); int MPI_Comm_spawn_multiple(int count, char **array_of_commands, char ***array_of_argv, int *array_of_maxprocs, MPI_Info *array_of_info, int root, MPI_Comm comm, MPI_Comm *intercomm, int *array_of_errcodes); int MPI_Comm_split(MPI_Comm comm, int color, int key, MPI_Comm *newcomm); int MPI_Comm_test_inter(MPI_Comm comm, int *flag); int MPI_Dims_create(int nnodes, int ndims, int *dims); int MPI_Errhandler_c2f(MPI_Errhandler errhandler); int MPI_Errhandler_create(MPI_Handler_function *function, MPI_Errhandler *errhandler) ; MPI_Errhandler MPI_Errhandler_f2c(int errhandler); int MPI_Errhandler_free(MPI_Errhandler *errhandler); int MPI_Errhandler_get(MPI_Comm comm, MPI_Errhandler *errhandler) ; int MPI_Errhandler_set(MPI_Comm comm, MPI_Errhandler errhandler) ; int MPI_Error_class(int errorcode, int *errorclass); int MPI_Error_string(int errorcode, char *string, int *resultlen); int MPI_Exscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int MPI_Iexscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int MPI_File_c2f(MPI_File file); MPI_File MPI_File_f2c(int file); int MPI_File_call_errhandler(MPI_File fh, int errorcode); int MPI_File_create_errhandler(MPI_File_errhandler_function *function, MPI_Errhandler *errhandler); int MPI_File_set_errhandler( MPI_File file, MPI_Errhandler errhandler); int MPI_File_get_errhandler( MPI_File file, MPI_Errhandler *errhandler); int MPI_File_open(MPI_Comm comm, char *filename, int amode, MPI_Info info, MPI_File *fh); int MPI_File_close(MPI_File *fh); int MPI_File_delete(char *filename, MPI_Info info); int MPI_File_set_size(MPI_File fh, MPI_Offset size); int MPI_File_preallocate(MPI_File fh, MPI_Offset size); int MPI_File_get_size(MPI_File fh, MPI_Offset *size); int MPI_File_get_group(MPI_File fh, MPI_Group *group); int MPI_File_get_amode(MPI_File fh, int *amode); int MPI_File_set_info(MPI_File fh, MPI_Info info); int MPI_File_get_info(MPI_File fh, MPI_Info *info_used); int MPI_File_set_view(MPI_File fh, MPI_Offset disp, MPI_Datatype etype, MPI_Datatype filetype, char *datarep, MPI_Info info); int MPI_File_get_view(MPI_File fh, MPI_Offset *disp, MPI_Datatype *etype, MPI_Datatype *filetype, char *datarep); int MPI_File_read_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_read_at_all(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write_at_all(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_iread_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_iwrite_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_read(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_read_all(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write_all(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_iread(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_iwrite(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_seek(MPI_File fh, MPI_Offset offset, int whence); int MPI_File_get_position(MPI_File fh, MPI_Offset *offset); int MPI_File_get_byte_offset(MPI_File fh, MPI_Offset offset, MPI_Offset *disp); int MPI_File_read_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_iread_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_iwrite_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_read_ordered(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write_ordered(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_seek_shared(MPI_File fh, MPI_Offset offset, int whence); int MPI_File_get_position_shared(MPI_File fh, MPI_Offset *offset); int MPI_File_read_at_all_begin(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype); int MPI_File_read_at_all_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_write_at_all_begin(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype); int MPI_File_write_at_all_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_read_all_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int MPI_File_read_all_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_write_all_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int MPI_File_write_all_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_read_ordered_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int MPI_File_read_ordered_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_write_ordered_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int MPI_File_write_ordered_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_get_type_extent(MPI_File fh, MPI_Datatype datatype, MPI_Aint *extent); int MPI_File_set_atomicity(MPI_File fh, int flag); int MPI_File_get_atomicity(MPI_File fh, int *flag); int MPI_File_sync(MPI_File fh); int MPI_Finalize(void); int MPI_Finalized(int *flag); int MPI_Free_mem(void *base); int MPI_Gather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int MPI_Igather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int MPI_Gatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, int root, MPI_Comm comm); int MPI_Igatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int MPI_Get_address(void *location, MPI_Aint *address); int MPI_Get_count(MPI_Status *status, MPI_Datatype datatype, int *count); int MPI_Get_elements(MPI_Status *status, MPI_Datatype datatype, int *count); int MPI_Get(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Win win); int MPI_Get_processor_name(char *name, int *resultlen); int MPI_Get_version(int *version, int *subversion); int MPI_Graph_create(MPI_Comm comm_old, int nnodes, int *index, int *edges, int reorder, MPI_Comm *comm_graph); int MPI_Graph_get(MPI_Comm comm, int maxindex, int maxedges, int *index, int *edges); int MPI_Graph_map(MPI_Comm comm, int nnodes, int *index, int *edges, int *newrank); int MPI_Graph_neighbors_count(MPI_Comm comm, int rank, int *nneighbors); int MPI_Graph_neighbors(MPI_Comm comm, int rank, int maxneighbors, int *neighbors); int MPI_Graphdims_get(MPI_Comm comm, int *nnodes, int *nedges); int MPI_Grequest_complete(MPI_Request request); int MPI_Grequest_start(MPI_Grequest_query_function *query_fn, MPI_Grequest_free_function *free_fn, MPI_Grequest_cancel_function *cancel_fn, void *extra_state, MPI_Request *request); int MPI_Group_c2f(MPI_Group group); int MPI_Group_compare(MPI_Group group1, MPI_Group group2, int *result); int MPI_Group_difference(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int MPI_Group_excl(MPI_Group group, int n, int *ranks, MPI_Group *newgroup); MPI_Group MPI_Group_f2c(int group); int MPI_Group_free(MPI_Group *group); int MPI_Group_incl(MPI_Group group, int n, int *ranks, MPI_Group *newgroup); int MPI_Group_intersection(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int MPI_Group_range_excl(MPI_Group group, int n, int ranges[][3], MPI_Group *newgroup); int MPI_Group_range_incl(MPI_Group group, int n, int ranges[][3], MPI_Group *newgroup); int MPI_Group_rank(MPI_Group group, int *rank); int MPI_Group_size(MPI_Group group, int *size); int MPI_Group_translate_ranks(MPI_Group group1, int n, int *ranks1, MPI_Group group2, int *ranks2); int MPI_Group_union(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int MPI_Ibsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Improbe(int source, int tag, MPI_Comm comm, int *flag, MPI_Message *message, MPI_Status *status); int MPI_Imrecv(void *buf, int count, MPI_Datatype type, MPI_Message *message, MPI_Request *request); int MPI_Info_c2f(MPI_Info info); int MPI_Info_create(MPI_Info *info); int MPI_Info_delete(MPI_Info info, char *key); int MPI_Info_dup(MPI_Info info, MPI_Info *newinfo); MPI_Info MPI_Info_f2c(int info); int MPI_Info_free(MPI_Info *info); int MPI_Info_get(MPI_Info info, char *key, int valuelen, char *value, int *flag); int MPI_Info_get_nkeys(MPI_Info info, int *nkeys); int MPI_Info_get_nthkey(MPI_Info info, int n, char *key); int MPI_Info_get_valuelen(MPI_Info info, char *key, int *valuelen, int *flag); int MPI_Info_set(MPI_Info info, char *key, char *value); int MPI_Init(int *argc, char ***argv); int MPI_Initialized(int *flag); int MPI_Init_thread(int *argc, char ***argv, int required, int *provided); int MPI_Intercomm_create(MPI_Comm local_comm, int local_leader, MPI_Comm bridge_comm, int remote_leader, int tag, MPI_Comm *newintercomm); int MPI_Intercomm_merge(MPI_Comm intercomm, int high, MPI_Comm *newintercomm); int MPI_Iprobe(int source, int tag, MPI_Comm comm, int *flag, MPI_Status *status); int MPI_Irecv(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Irsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Isend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Issend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Is_thread_main(int *flag); int MPI_Keyval_create(MPI_Copy_function *copy_fn, MPI_Delete_function *delete_fn, int *keyval, void *extra_state) ; int MPI_Keyval_free(int *keyval) ; int MPI_Lookup_name(char *service_name, MPI_Info info, char *port_name); int MPI_Message_c2f(MPI_Message message); MPI_Message MPI_Message_f2c(int message); int MPI_Mprobe(int source, int tag, MPI_Comm comm, MPI_Message *message, MPI_Status *status); int MPI_Mrecv(void *buf, int count, MPI_Datatype type, MPI_Message *message, MPI_Status *status); int MPI_Op_c2f(MPI_Op op); int MPI_Op_commutative(MPI_Op op, int *commute); int MPI_Op_create(MPI_User_function *function, int commute, MPI_Op *op); int MPI_Open_port(MPI_Info info, char *port_name); MPI_Op MPI_Op_f2c(int op); int MPI_Op_free(MPI_Op *op); int MPI_Pack_external(char *datarep, void *inbuf, int incount, MPI_Datatype datatype, void *outbuf, MPI_Aint outsize, MPI_Aint *position); int MPI_Pack_external_size(char *datarep, int incount, MPI_Datatype datatype, MPI_Aint *size); int MPI_Pack(void *inbuf, int incount, MPI_Datatype datatype, void *outbuf, int outsize, int *position, MPI_Comm comm); int MPI_Pack_size(int incount, MPI_Datatype datatype, MPI_Comm comm, int *size); int MPI_Pcontrol(const int level, ...); int MPI_Probe(int source, int tag, MPI_Comm comm, MPI_Status *status); int MPI_Publish_name(char *service_name, MPI_Info info, char *port_name); int MPI_Put(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Win win); int MPI_Query_thread(int *provided); int MPI_Recv_init(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Recv(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Status *status); int MPI_Reduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, int root, MPI_Comm comm); int MPI_Ireduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, int root, MPI_Comm comm, MPI_Request *request); int MPI_Reduce_local(void *inbuf, void *inoutbuf, int count, MPI_Datatype datatype, MPI_Op op); int MPI_Reduce_scatter(void *sendbuf, void *recvbuf, int *recvcounts, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int MPI_Ireduce_scatter(void *sendbuf, void *recvbuf, int *recvcounts, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int MPI_Reduce_scatter_block(void *sendbuf, void *recvbuf, int recvcount, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int MPI_Ireduce_scatter_block(void *sendbuf, void *recvbuf, int recvcount, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int MPI_Register_datarep(char *datarep, MPI_Datarep_conversion_function *read_conversion_fn, MPI_Datarep_conversion_function *write_conversion_fn, MPI_Datarep_extent_function *dtype_file_extent_fn, void *extra_state); int MPI_Request_c2f(MPI_Request request); MPI_Request MPI_Request_f2c(int request); int MPI_Request_free(MPI_Request *request); int MPI_Request_get_status(MPI_Request request, int *flag, MPI_Status *status); int MPI_Rsend(void *ibuf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int MPI_Rsend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Scan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int MPI_Iscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int MPI_Scatter(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int MPI_Iscatter(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int MPI_Scatterv(void *sendbuf, int *sendcounts, int *displs, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int MPI_Iscatterv(void *sendbuf, int *sendcounts, int *displs, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int MPI_Send_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Send(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int MPI_Sendrecv(void *sendbuf, int sendcount, MPI_Datatype sendtype, int dest, int sendtag, void *recvbuf, int recvcount, MPI_Datatype recvtype, int source, int recvtag, MPI_Comm comm, MPI_Status *status); int MPI_Sendrecv_replace(void * buf, int count, MPI_Datatype datatype, int dest, int sendtag, int source, int recvtag, MPI_Comm comm, MPI_Status *status); int MPI_Ssend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Ssend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int MPI_Start(MPI_Request *request); int MPI_Startall(int count, MPI_Request *array_of_requests); int MPI_Status_c2f(MPI_Status *c_status, int *f_status); int MPI_Status_f2c(int *f_status, MPI_Status *c_status); int MPI_Status_set_cancelled(MPI_Status *status, int flag); int MPI_Status_set_elements(MPI_Status *status, MPI_Datatype datatype, int count); int MPI_Testall(int count, MPI_Request array_of_requests[], int *flag, MPI_Status array_of_statuses[]); int MPI_Testany(int count, MPI_Request array_of_requests[], int *index, int *flag, MPI_Status *status); int MPI_Test(MPI_Request *request, int *flag, MPI_Status *status); int MPI_Test_cancelled(MPI_Status *status, int *flag); int MPI_Testsome(int incount, MPI_Request array_of_requests[], int *outcount, int array_of_indices[], MPI_Status array_of_statuses[]); int MPI_Topo_test(MPI_Comm comm, int *status); int MPI_Type_c2f(MPI_Datatype datatype); int MPI_Type_commit(MPI_Datatype *type); int MPI_Type_contiguous(int count, MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_darray(int size, int rank, int ndims, int gsize_array[], int distrib_array[], int darg_array[], int psize_array[], int order, MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_f90_complex(int p, int r, MPI_Datatype *newtype); int MPI_Type_create_f90_integer(int r, MPI_Datatype *newtype); int MPI_Type_create_f90_real(int p, int r, MPI_Datatype *newtype); int MPI_Type_create_hindexed(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_hvector(int count, int blocklength, MPI_Aint stride, MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_keyval(MPI_Type_copy_attr_function *type_copy_attr_fn, MPI_Type_delete_attr_function *type_delete_attr_fn, int *type_keyval, void *extra_state); int MPI_Type_create_indexed_block(int count, int blocklength, int array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_struct(int count, int array_of_block_lengths[], MPI_Aint array_of_displacements[], MPI_Datatype array_of_types[], MPI_Datatype *newtype); int MPI_Type_create_subarray(int ndims, int size_array[], int subsize_array[], int start_array[], int order, MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_resized(MPI_Datatype oldtype, MPI_Aint lb, MPI_Aint extent, MPI_Datatype *newtype); int MPI_Type_delete_attr(MPI_Datatype type, int type_keyval); int MPI_Type_dup(MPI_Datatype type, MPI_Datatype *newtype); int MPI_Type_extent(MPI_Datatype type, MPI_Aint *extent) ; int MPI_Type_free(MPI_Datatype *type); int MPI_Type_free_keyval(int *type_keyval); MPI_Datatype MPI_Type_f2c(int datatype); int MPI_Type_get_attr(MPI_Datatype type, int type_keyval, void *attribute_val, int *flag); int MPI_Type_get_contents(MPI_Datatype mtype, int max_integers, int max_addresses, int max_datatypes, int array_of_integers[], MPI_Aint array_of_addresses[], MPI_Datatype array_of_datatypes[]); int MPI_Type_get_envelope(MPI_Datatype type, int *num_integers, int *num_addresses, int *num_datatypes, int *combiner); int MPI_Type_get_extent(MPI_Datatype type, MPI_Aint *lb, MPI_Aint *extent); int MPI_Type_get_name(MPI_Datatype type, char *type_name, int *resultlen); int MPI_Type_get_true_extent(MPI_Datatype datatype, MPI_Aint *true_lb, MPI_Aint *true_extent); int MPI_Type_hindexed(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype) ; int MPI_Type_hvector(int count, int blocklength, MPI_Aint stride, MPI_Datatype oldtype, MPI_Datatype *newtype) ; int MPI_Type_indexed(int count, int array_of_blocklengths[], int array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_lb(MPI_Datatype type, MPI_Aint *lb) ; int MPI_Type_match_size(int typeclass, int size, MPI_Datatype *type); int MPI_Type_set_attr(MPI_Datatype type, int type_keyval, void *attr_val); int MPI_Type_set_name(MPI_Datatype type, char *type_name); int MPI_Type_size(MPI_Datatype type, int *size); int MPI_Type_struct(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype array_of_types[], MPI_Datatype *newtype) ; int MPI_Type_ub(MPI_Datatype mtype, MPI_Aint *ub) ; int MPI_Type_vector(int count, int blocklength, int stride, MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Unpack(void *inbuf, int insize, int *position, void *outbuf, int outcount, MPI_Datatype datatype, MPI_Comm comm); int MPI_Unpublish_name(char *service_name, MPI_Info info, char *port_name); int MPI_Unpack_external (char *datarep, void *inbuf, MPI_Aint insize, MPI_Aint *position, void *outbuf, int outcount, MPI_Datatype datatype); int MPI_Waitall(int count, MPI_Request *array_of_requests, MPI_Status *array_of_statuses); int MPI_Waitany(int count, MPI_Request *array_of_requests, int *index, MPI_Status *status); int MPI_Wait(MPI_Request *request, MPI_Status *status); int MPI_Waitsome(int incount, MPI_Request *array_of_requests, int *outcount, int *array_of_indices, MPI_Status *array_of_statuses); int MPI_Win_c2f(MPI_Win win); int MPI_Win_call_errhandler(MPI_Win win, int errorcode); int MPI_Win_complete(MPI_Win win); int MPI_Win_create(void *base, MPI_Aint size, int disp_unit, MPI_Info info, MPI_Comm comm, MPI_Win *win); int MPI_Win_create_errhandler(MPI_Win_errhandler_function *function, MPI_Errhandler *errhandler); int MPI_Win_create_keyval(MPI_Win_copy_attr_function *win_copy_attr_fn, MPI_Win_delete_attr_function *win_delete_attr_fn, int *win_keyval, void *extra_state); int MPI_Win_delete_attr(MPI_Win win, int win_keyval); MPI_Win MPI_Win_f2c(int win); int MPI_Win_fence(int assert, MPI_Win win); int MPI_Win_free(MPI_Win *win); int MPI_Win_free_keyval(int *win_keyval); int MPI_Win_get_attr(MPI_Win win, int win_keyval, void *attribute_val, int *flag); int MPI_Win_get_errhandler(MPI_Win win, MPI_Errhandler *errhandler); int MPI_Win_get_group(MPI_Win win, MPI_Group *group); int MPI_Win_get_name(MPI_Win win, char *win_name, int *resultlen); int MPI_Win_lock(int lock_type, int rank, int assert, MPI_Win win); int MPI_Win_post(MPI_Group group, int assert, MPI_Win win); int MPI_Win_set_attr(MPI_Win win, int win_keyval, void *attribute_val); int MPI_Win_set_errhandler(MPI_Win win, MPI_Errhandler errhandler); int MPI_Win_set_name(MPI_Win win, char *win_name); int MPI_Win_start(MPI_Group group, int assert, MPI_Win win); int MPI_Win_test(MPI_Win win, int *flag); int MPI_Win_unlock(int rank, MPI_Win win); int MPI_Win_wait(MPI_Win win); double MPI_Wtick(void); double MPI_Wtime(void); int PMPI_Abort(MPI_Comm comm, int errorcode); int PMPI_Accumulate(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Op op, MPI_Win win); int PMPI_Add_error_class(int *errorclass); int PMPI_Add_error_code(int errorclass, int *errorcode); int PMPI_Add_error_string(int errorcode, char *string); int PMPI_Address(void *location, MPI_Aint *address) ; int PMPI_Allgather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm); int PMPI_Iallgather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int PMPI_Allgatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, MPI_Comm comm); int PMPI_Iallgatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int PMPI_Alloc_mem(MPI_Aint size, MPI_Info info, void *baseptr); int PMPI_Allreduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int PMPI_Iallreduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int PMPI_Alltoall(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm); int PMPI_Ialltoall(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int PMPI_Alltoallv(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype recvtype, MPI_Comm comm); int PMPI_Ialltoallv(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int PMPI_Alltoallw(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype *sendtypes, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype *recvtypes, MPI_Comm comm); int PMPI_Ialltoallw(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype *sendtypes, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype *recvtypes, MPI_Comm comm, MPI_Request *request); int PMPI_Attr_delete(MPI_Comm comm, int keyval) ; int PMPI_Attr_get(MPI_Comm comm, int keyval, void *attribute_val, int *flag) ; int PMPI_Dist_graph_create(MPI_Comm comm_old, int n, int nodes[], int degrees[], int targets[], int weights[], MPI_Info info, int reorder, MPI_Comm * newcomm); int PMPI_Dist_graph_create_adjacent(MPI_Comm comm_old, int indegree, int sources[], int sourceweights[], int outdegree, int destinations[], int destweights[], MPI_Info info, int reorder, MPI_Comm *comm_dist_graph); int PMPI_Dist_graph_neighbors(MPI_Comm comm, int maxindegree, int sources[], int sourceweights[], int maxoutdegree, int destinations[], int destweights[]); int PMPI_Dist_graph_neighbors_count(MPI_Comm comm, int *inneighbors, int *outneighbors, int *weighted); int PMPI_Attr_put(MPI_Comm comm, int keyval, void *attribute_val) ; int PMPI_Barrier(MPI_Comm comm); int PMPI_Ibarrier(MPI_Comm comm, MPI_Request *request); int PMPI_Bcast(void *buffer, int count, MPI_Datatype datatype, int root, MPI_Comm comm); int PMPI_Ibcast(void *buffer, int count, MPI_Datatype datatype, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Bsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int PMPI_Bsend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Buffer_attach(void *buffer, int size); int PMPI_Buffer_detach(void *buffer, int *size); int PMPI_Cancel(MPI_Request *request); int PMPI_Cart_coords(MPI_Comm comm, int rank, int maxdims, int *coords); int PMPI_Cart_create(MPI_Comm old_comm, int ndims, int *dims, int *periods, int reorder, MPI_Comm *comm_cart); int PMPI_Cart_get(MPI_Comm comm, int maxdims, int *dims, int *periods, int *coords); int PMPI_Cart_map(MPI_Comm comm, int ndims, int *dims, int *periods, int *newrank); int PMPI_Cart_rank(MPI_Comm comm, int *coords, int *rank); int PMPI_Cart_shift(MPI_Comm comm, int direction, int disp, int *rank_source, int *rank_dest); int PMPI_Cart_sub(MPI_Comm comm, int *remain_dims, MPI_Comm *new_comm); int PMPI_Cartdim_get(MPI_Comm comm, int *ndims); int PMPI_Close_port(char *port_name); int PMPI_Comm_accept(char *port_name, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *newcomm); int PMPI_Comm_c2f(MPI_Comm comm); int PMPI_Comm_call_errhandler(MPI_Comm comm, int errorcode); int PMPI_Comm_compare(MPI_Comm comm1, MPI_Comm comm2, int *result); int PMPI_Comm_connect(char *port_name, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *newcomm); int PMPI_Comm_create_errhandler(MPI_Comm_errhandler_function *function, MPI_Errhandler *errhandler); int PMPI_Comm_create_keyval(MPI_Comm_copy_attr_function *comm_copy_attr_fn, MPI_Comm_delete_attr_function *comm_delete_attr_fn, int *comm_keyval, void *extra_state); int PMPI_Comm_create(MPI_Comm comm, MPI_Group group, MPI_Comm *newcomm); int PMPI_Comm_delete_attr(MPI_Comm comm, int comm_keyval); int PMPI_Comm_disconnect(MPI_Comm *comm); int PMPI_Comm_dup(MPI_Comm comm, MPI_Comm *newcomm); MPI_Comm PMPI_Comm_f2c(int comm); int PMPI_Comm_free_keyval(int *comm_keyval); int PMPI_Comm_free(MPI_Comm *comm); int PMPI_Comm_get_attr(MPI_Comm comm, int comm_keyval, void *attribute_val, int *flag); int PMPI_Comm_get_errhandler(MPI_Comm comm, MPI_Errhandler *erhandler); int PMPI_Comm_get_name(MPI_Comm comm, char *comm_name, int *resultlen); int PMPI_Comm_get_parent(MPI_Comm *parent); int PMPI_Comm_group(MPI_Comm comm, MPI_Group *group); int PMPI_Comm_join(int fd, MPI_Comm *intercomm); int PMPI_Comm_rank(MPI_Comm comm, int *rank); int PMPI_Comm_remote_group(MPI_Comm comm, MPI_Group *group); int PMPI_Comm_remote_size(MPI_Comm comm, int *size); int PMPI_Comm_set_attr(MPI_Comm comm, int comm_keyval, void *attribute_val); int PMPI_Comm_set_errhandler(MPI_Comm comm, MPI_Errhandler errhandler); int PMPI_Comm_set_name(MPI_Comm comm, char *comm_name); int PMPI_Comm_size(MPI_Comm comm, int *size); int PMPI_Comm_spawn(char *command, char **argv, int maxprocs, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *intercomm, int *array_of_errcodes); int PMPI_Comm_spawn_multiple(int count, char **array_of_commands, char ***array_of_argv, int *array_of_maxprocs, MPI_Info *array_of_info, int root, MPI_Comm comm, MPI_Comm *intercomm, int *array_of_errcodes); int PMPI_Comm_split(MPI_Comm comm, int color, int key, MPI_Comm *newcomm); int PMPI_Comm_test_inter(MPI_Comm comm, int *flag); int PMPI_Dims_create(int nnodes, int ndims, int *dims); int PMPI_Errhandler_c2f(MPI_Errhandler errhandler); int PMPI_Errhandler_create(MPI_Handler_function *function, MPI_Errhandler *errhandler) ; MPI_Errhandler PMPI_Errhandler_f2c(int errhandler); int PMPI_Errhandler_free(MPI_Errhandler *errhandler); int PMPI_Errhandler_get(MPI_Comm comm, MPI_Errhandler *errhandler) ; int PMPI_Errhandler_set(MPI_Comm comm, MPI_Errhandler errhandler) ; int PMPI_Error_class(int errorcode, int *errorclass); int PMPI_Error_string(int errorcode, char *string, int *resultlen); int PMPI_Exscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int PMPI_Iexscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int PMPI_File_c2f(MPI_File file); MPI_File PMPI_File_f2c(int file); int PMPI_File_call_errhandler(MPI_File fh, int errorcode); int PMPI_File_create_errhandler(MPI_File_errhandler_function *function, MPI_Errhandler *errhandler); int PMPI_File_set_errhandler( MPI_File file, MPI_Errhandler errhandler); int PMPI_File_get_errhandler( MPI_File file, MPI_Errhandler *errhandler); int PMPI_File_open(MPI_Comm comm, char *filename, int amode, MPI_Info info, MPI_File *fh); int PMPI_File_close(MPI_File *fh); int PMPI_File_delete(char *filename, MPI_Info info); int PMPI_File_set_size(MPI_File fh, MPI_Offset size); int PMPI_File_preallocate(MPI_File fh, MPI_Offset size); int PMPI_File_get_size(MPI_File fh, MPI_Offset *size); int PMPI_File_get_group(MPI_File fh, MPI_Group *group); int PMPI_File_get_amode(MPI_File fh, int *amode); int PMPI_File_set_info(MPI_File fh, MPI_Info info); int PMPI_File_get_info(MPI_File fh, MPI_Info *info_used); int PMPI_File_set_view(MPI_File fh, MPI_Offset disp, MPI_Datatype etype, MPI_Datatype filetype, char *datarep, MPI_Info info); int PMPI_File_get_view(MPI_File fh, MPI_Offset *disp, MPI_Datatype *etype, MPI_Datatype *filetype, char *datarep); int PMPI_File_read_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_read_at_all(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write_at_all(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_iread_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_iwrite_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_read(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_read_all(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write_all(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_iread(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_iwrite(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_seek(MPI_File fh, MPI_Offset offset, int whence); int PMPI_File_get_position(MPI_File fh, MPI_Offset *offset); int PMPI_File_get_byte_offset(MPI_File fh, MPI_Offset offset, MPI_Offset *disp); int PMPI_File_read_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_iread_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_iwrite_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_read_ordered(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write_ordered(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_seek_shared(MPI_File fh, MPI_Offset offset, int whence); int PMPI_File_get_position_shared(MPI_File fh, MPI_Offset *offset); int PMPI_File_read_at_all_begin(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype); int PMPI_File_read_at_all_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_write_at_all_begin(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype); int PMPI_File_write_at_all_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_read_all_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int PMPI_File_read_all_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_write_all_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int PMPI_File_write_all_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_read_ordered_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int PMPI_File_read_ordered_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_write_ordered_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int PMPI_File_write_ordered_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_get_type_extent(MPI_File fh, MPI_Datatype datatype, MPI_Aint *extent); int PMPI_File_set_atomicity(MPI_File fh, int flag); int PMPI_File_get_atomicity(MPI_File fh, int *flag); int PMPI_File_sync(MPI_File fh); int PMPI_Finalize(void); int PMPI_Finalized(int *flag); int PMPI_Free_mem(void *base); int PMPI_Gather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int PMPI_Igather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Gatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, int root, MPI_Comm comm); int PMPI_Igatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Get_address(void *location, MPI_Aint *address); int PMPI_Get_count(MPI_Status *status, MPI_Datatype datatype, int *count); int PMPI_Get_elements(MPI_Status *status, MPI_Datatype datatype, int *count); int PMPI_Get(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Win win); int PMPI_Get_processor_name(char *name, int *resultlen); int PMPI_Get_version(int *version, int *subversion); int PMPI_Graph_create(MPI_Comm comm_old, int nnodes, int *index, int *edges, int reorder, MPI_Comm *comm_graph); int PMPI_Graph_get(MPI_Comm comm, int maxindex, int maxedges, int *index, int *edges); int PMPI_Graph_map(MPI_Comm comm, int nnodes, int *index, int *edges, int *newrank); int PMPI_Graph_neighbors_count(MPI_Comm comm, int rank, int *nneighbors); int PMPI_Graph_neighbors(MPI_Comm comm, int rank, int maxneighbors, int *neighbors); int PMPI_Graphdims_get(MPI_Comm comm, int *nnodes, int *nedges); int PMPI_Grequest_complete(MPI_Request request); int PMPI_Grequest_start(MPI_Grequest_query_function *query_fn, MPI_Grequest_free_function *free_fn, MPI_Grequest_cancel_function *cancel_fn, void *extra_state, MPI_Request *request); int PMPI_Group_c2f(MPI_Group group); int PMPI_Group_compare(MPI_Group group1, MPI_Group group2, int *result); int PMPI_Group_difference(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int PMPI_Group_excl(MPI_Group group, int n, int *ranks, MPI_Group *newgroup); MPI_Group PMPI_Group_f2c(int group); int PMPI_Group_free(MPI_Group *group); int PMPI_Group_incl(MPI_Group group, int n, int *ranks, MPI_Group *newgroup); int PMPI_Group_intersection(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int PMPI_Group_range_excl(MPI_Group group, int n, int ranges[][3], MPI_Group *newgroup); int PMPI_Group_range_incl(MPI_Group group, int n, int ranges[][3], MPI_Group *newgroup); int PMPI_Group_rank(MPI_Group group, int *rank); int PMPI_Group_size(MPI_Group group, int *size); int PMPI_Group_translate_ranks(MPI_Group group1, int n, int *ranks1, MPI_Group group2, int *ranks2); int PMPI_Group_union(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int PMPI_Ibsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Improbe(int source, int tag, MPI_Comm comm, int *flag, MPI_Message *message, MPI_Status *status); int PMPI_Imrecv(void *buf, int count, MPI_Datatype type, MPI_Message *message, MPI_Request *request); int PMPI_Info_c2f(MPI_Info info); int PMPI_Info_create(MPI_Info *info); int PMPI_Info_delete(MPI_Info info, char *key); int PMPI_Info_dup(MPI_Info info, MPI_Info *newinfo); MPI_Info PMPI_Info_f2c(int info); int PMPI_Info_free(MPI_Info *info); int PMPI_Info_get(MPI_Info info, char *key, int valuelen, char *value, int *flag); int PMPI_Info_get_nkeys(MPI_Info info, int *nkeys); int PMPI_Info_get_nthkey(MPI_Info info, int n, char *key); int PMPI_Info_get_valuelen(MPI_Info info, char *key, int *valuelen, int *flag); int PMPI_Info_set(MPI_Info info, char *key, char *value); int PMPI_Init(int *argc, char ***argv); int PMPI_Initialized(int *flag); int PMPI_Init_thread(int *argc, char ***argv, int required, int *provided); int PMPI_Intercomm_create(MPI_Comm local_comm, int local_leader, MPI_Comm bridge_comm, int remote_leader, int tag, MPI_Comm *newintercomm); int PMPI_Intercomm_merge(MPI_Comm intercomm, int high, MPI_Comm *newintercomm); int PMPI_Iprobe(int source, int tag, MPI_Comm comm, int *flag, MPI_Status *status); int PMPI_Irecv(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Irsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Isend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Issend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Is_thread_main(int *flag); int PMPI_Keyval_create(MPI_Copy_function *copy_fn, MPI_Delete_function *delete_fn, int *keyval, void *extra_state) ; int PMPI_Keyval_free(int *keyval) ; int PMPI_Lookup_name(char *service_name, MPI_Info info, char *port_name); int PMPI_Message_c2f(MPI_Message message); MPI_Message PMPI_Message_f2c(int message); int PMPI_Mprobe(int source, int tag, MPI_Comm comm, MPI_Message *message, MPI_Status *status); int PMPI_Mrecv(void *buf, int count, MPI_Datatype type, MPI_Message *message, MPI_Status *status); int PMPI_Op_c2f(MPI_Op op); int PMPI_Op_commutative(MPI_Op op, int *commute); int PMPI_Op_create(MPI_User_function *function, int commute, MPI_Op *op); int PMPI_Open_port(MPI_Info info, char *port_name); MPI_Op PMPI_Op_f2c(int op); int PMPI_Op_free(MPI_Op *op); int PMPI_Pack_external(char *datarep, void *inbuf, int incount, MPI_Datatype datatype, void *outbuf, MPI_Aint outsize, MPI_Aint *position); int PMPI_Pack_external_size(char *datarep, int incount, MPI_Datatype datatype, MPI_Aint *size); int PMPI_Pack(void *inbuf, int incount, MPI_Datatype datatype, void *outbuf, int outsize, int *position, MPI_Comm comm); int PMPI_Pack_size(int incount, MPI_Datatype datatype, MPI_Comm comm, int *size); int PMPI_Pcontrol(const int level, ...); int PMPI_Probe(int source, int tag, MPI_Comm comm, MPI_Status *status); int PMPI_Publish_name(char *service_name, MPI_Info info, char *port_name); int PMPI_Put(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Win win); int PMPI_Query_thread(int *provided); int PMPI_Recv_init(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Recv(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Status *status); int PMPI_Reduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, int root, MPI_Comm comm); int PMPI_Ireduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Reduce_local(void *inbuf, void *inoutbuf, int count, MPI_Datatype datatype, MPI_Op); int PMPI_Reduce_scatter(void *sendbuf, void *recvbuf, int *recvcounts, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int PMPI_Ireduce_scatter(void *sendbuf, void *recvbuf, int *recvcounts, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int PMPI_Reduce_scatter_block(void *sendbuf, void *recvbuf, int recvcount, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int PMPI_Ireduce_scatter_block(void *sendbuf, void *recvbuf, int recvcount, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int PMPI_Register_datarep(char *datarep, MPI_Datarep_conversion_function *read_conversion_fn, MPI_Datarep_conversion_function *write_conversion_fn, MPI_Datarep_extent_function *dtype_file_extent_fn, void *extra_state); int PMPI_Request_c2f(MPI_Request request); MPI_Request PMPI_Request_f2c(int request); int PMPI_Request_free(MPI_Request *request); int PMPI_Request_get_status(MPI_Request request, int *flag, MPI_Status *status); int PMPI_Rsend(void *ibuf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int PMPI_Rsend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Scan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int PMPI_Iscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int PMPI_Scatter(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int PMPI_Iscatter(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Scatterv(void *sendbuf, int *sendcounts, int *displs, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int PMPI_Iscatterv(void *sendbuf, int *sendcounts, int *displs, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Send_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Send(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int PMPI_Sendrecv(void *sendbuf, int sendcount, MPI_Datatype sendtype, int dest, int sendtag, void *recvbuf, int recvcount, MPI_Datatype recvtype, int source, int recvtag, MPI_Comm comm, MPI_Status *status); int PMPI_Sendrecv_replace(void * buf, int count, MPI_Datatype datatype, int dest, int sendtag, int source, int recvtag, MPI_Comm comm, MPI_Status *status); int PMPI_Ssend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Ssend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int PMPI_Start(MPI_Request *request); int PMPI_Startall(int count, MPI_Request *array_of_requests); int PMPI_Status_c2f(MPI_Status *c_status, int *f_status); int PMPI_Status_f2c(int *f_status, MPI_Status *c_status); int PMPI_Status_set_cancelled(MPI_Status *status, int flag); int PMPI_Status_set_elements(MPI_Status *status, MPI_Datatype datatype, int count); int PMPI_Testall(int count, MPI_Request array_of_requests[], int *flag, MPI_Status array_of_statuses[]); int PMPI_Testany(int count, MPI_Request array_of_requests[], int *index, int *flag, MPI_Status *status); int PMPI_Test(MPI_Request *request, int *flag, MPI_Status *status); int PMPI_Test_cancelled(MPI_Status *status, int *flag); int PMPI_Testsome(int incount, MPI_Request array_of_requests[], int *outcount, int array_of_indices[], MPI_Status array_of_statuses[]); int PMPI_Topo_test(MPI_Comm comm, int *status); int PMPI_Type_c2f(MPI_Datatype datatype); int PMPI_Type_commit(MPI_Datatype *type); int PMPI_Type_contiguous(int count, MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_darray(int size, int rank, int ndims, int gsize_array[], int distrib_array[], int darg_array[], int psize_array[], int order, MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_f90_complex(int p, int r, MPI_Datatype *newtype); int PMPI_Type_create_f90_integer(int r, MPI_Datatype *newtype); int PMPI_Type_create_f90_real(int p, int r, MPI_Datatype *newtype); int PMPI_Type_create_hindexed(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_hvector(int count, int blocklength, MPI_Aint stride, MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_keyval(MPI_Type_copy_attr_function *type_copy_attr_fn, MPI_Type_delete_attr_function *type_delete_attr_fn, int *type_keyval, void *extra_state); int PMPI_Type_create_indexed_block(int count, int blocklength, int array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_struct(int count, int array_of_block_lengths[], MPI_Aint array_of_displacements[], MPI_Datatype array_of_types[], MPI_Datatype *newtype); int PMPI_Type_create_subarray(int ndims, int size_array[], int subsize_array[], int start_array[], int order, MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_resized(MPI_Datatype oldtype, MPI_Aint lb, MPI_Aint extent, MPI_Datatype *newtype); int PMPI_Type_delete_attr(MPI_Datatype type, int type_keyval); int PMPI_Type_dup(MPI_Datatype type, MPI_Datatype *newtype); int PMPI_Type_extent(MPI_Datatype type, MPI_Aint *extent) ; int PMPI_Type_free(MPI_Datatype *type); int PMPI_Type_free_keyval(int *type_keyval); MPI_Datatype PMPI_Type_f2c(int datatype); int PMPI_Type_get_attr(MPI_Datatype type, int type_keyval, void *attribute_val, int *flag); int PMPI_Type_get_contents(MPI_Datatype mtype, int max_integers, int max_addresses, int max_datatypes, int array_of_integers[], MPI_Aint array_of_addresses[], MPI_Datatype array_of_datatypes[]); int PMPI_Type_get_envelope(MPI_Datatype type, int *num_integers, int *num_addresses, int *num_datatypes, int *combiner); int PMPI_Type_get_extent(MPI_Datatype type, MPI_Aint *lb, MPI_Aint *extent); int PMPI_Type_get_name(MPI_Datatype type, char *type_name, int *resultlen); int PMPI_Type_get_true_extent(MPI_Datatype datatype, MPI_Aint *true_lb, MPI_Aint *true_extent); int PMPI_Type_hindexed(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype) ; int PMPI_Type_hvector(int count, int blocklength, MPI_Aint stride, MPI_Datatype oldtype, MPI_Datatype *newtype) ; int PMPI_Type_indexed(int count, int array_of_blocklengths[], int array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_lb(MPI_Datatype type, MPI_Aint *lb) ; int PMPI_Type_match_size(int typeclass, int size, MPI_Datatype *type); int PMPI_Type_set_attr(MPI_Datatype type, int type_keyval, void *attr_val); int PMPI_Type_set_name(MPI_Datatype type, char *type_name); int PMPI_Type_size(MPI_Datatype type, int *size); int PMPI_Type_struct(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype array_of_types[], MPI_Datatype *newtype) ; int PMPI_Type_ub(MPI_Datatype mtype, MPI_Aint *ub) ; int PMPI_Type_vector(int count, int blocklength, int stride, MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Unpack(void *inbuf, int insize, int *position, void *outbuf, int outcount, MPI_Datatype datatype, MPI_Comm comm); int PMPI_Unpublish_name(char *service_name, MPI_Info info, char *port_name); int PMPI_Unpack_external (char *datarep, void *inbuf, MPI_Aint insize, MPI_Aint *position, void *outbuf, int outcount, MPI_Datatype datatype); int PMPI_Waitall(int count, MPI_Request *array_of_requests, MPI_Status *array_of_statuses); int PMPI_Waitany(int count, MPI_Request *array_of_requests, int *index, MPI_Status *status); int PMPI_Wait(MPI_Request *request, MPI_Status *status); int PMPI_Waitsome(int incount, MPI_Request *array_of_requests, int *outcount, int *array_of_indices, MPI_Status *array_of_statuses); int PMPI_Win_c2f(MPI_Win win); int PMPI_Win_call_errhandler(MPI_Win win, int errorcode); int PMPI_Win_complete(MPI_Win win); int PMPI_Win_create(void *base, MPI_Aint size, int disp_unit, MPI_Info info, MPI_Comm comm, MPI_Win *win); int PMPI_Win_create_errhandler(MPI_Win_errhandler_function *function, MPI_Errhandler *errhandler); int PMPI_Win_create_keyval(MPI_Win_copy_attr_function *win_copy_attr_fn, MPI_Win_delete_attr_function *win_delete_attr_fn, int *win_keyval, void *extra_state); int PMPI_Win_delete_attr(MPI_Win win, int win_keyval); MPI_Win PMPI_Win_f2c(int win); int PMPI_Win_fence(int assert, MPI_Win win); int PMPI_Win_free(MPI_Win *win); int PMPI_Win_free_keyval(int *win_keyval); int PMPI_Win_get_attr(MPI_Win win, int win_keyval, void *attribute_val, int *flag); int PMPI_Win_get_errhandler(MPI_Win win, MPI_Errhandler *errhandler); int PMPI_Win_get_group(MPI_Win win, MPI_Group *group); int PMPI_Win_get_name(MPI_Win win, char *win_name, int *resultlen); int PMPI_Win_lock(int lock_type, int rank, int assert, MPI_Win win); int PMPI_Win_post(MPI_Group group, int assert, MPI_Win win); int PMPI_Win_set_attr(MPI_Win win, int win_keyval, void *attribute_val); int PMPI_Win_set_errhandler(MPI_Win win, MPI_Errhandler errhandler); int PMPI_Win_set_name(MPI_Win win, char *win_name); int PMPI_Win_start(MPI_Group group, int assert, MPI_Win win); int PMPI_Win_test(MPI_Win win, int *flag); int PMPI_Win_unlock(int rank, MPI_Win win); int PMPI_Win_wait(MPI_Win win); double PMPI_Wtick(void); double PMPI_Wtime(void); #line 2281 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Found header files ['mpi.h'] in [] Popping language C ================================================================================ TEST configureConversion from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:212) TESTING: configureConversion from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:212) Check for the functions which convert communicators between C and Fortran - Define HAVE_MPI_COMM_F2C and HAVE_MPI_COMM_C2F if they are present - Some older MPI 1 implementations are missing these All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { if (MPI_Comm_f2c((MPI_Fint)0)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_MPI_COMM_F2C" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { if (MPI_Comm_c2f(MPI_COMM_WORLD)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_MPI_COMM_C2F" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c", line 6: warning: variable "a" was declared but never referenced MPI_Fint a; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_Fint a; ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_MPI_FINT" to "1" ================================================================================ TEST configureMPI2 from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:180) TESTING: configureMPI2 from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:180) Check for functions added to the interface in MPI-2 Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int flag;if (MPI_Finalized(&flag)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_MPI_FINALIZED" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { if (MPI_Allreduce(MPI_IN_PLACE,0, 1, MPI_INT, MPI_SUM, MPI_COMM_SELF)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_MPI_IN_PLACE" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c", line 6: warning: a value of type "int" cannot be used to initialize an entity of type "MPI_Datatype" int count=2; int blocklens[2]={0,1}; MPI_Aint indices[2]={0,1}; MPI_Datatype old_types[2]={0,1}; MPI_Datatype *newtype = 0; ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c", line 6: warning: conversion of nonzero integer to pointer int count=2; int blocklens[2]={0,1}; MPI_Aint indices[2]={0,1}; MPI_Datatype old_types[2]={0,1}; MPI_Datatype *newtype = 0; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { int count=2; int blocklens[2]={0,1}; MPI_Aint indices[2]={0,1}; MPI_Datatype old_types[2]={0,1}; MPI_Datatype *newtype = 0; if (MPI_Type_create_struct(count, blocklens, indices, old_types, newtype)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_Comm_errhandler_fn * p_err_fun = 0; MPI_Errhandler * p_errhandler = 0; if (MPI_Comm_create_errhandler(p_err_fun,p_errhandler)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { if (MPI_Comm_set_errhandler(MPI_COMM_WORLD,MPI_ERRORS_RETURN)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl ================================================================================ TEST configureTypes from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:232) TESTING: configureTypes from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:232) Checking for MPI types Checking for size of type: MPI_Comm Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif #define MPICH_IGNORE_CXX_SEEK #define MPICH_SKIP_MPICXX 1 #define OMPI_SKIP_MPICXX 1 #include int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(MPI_Comm)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Popping language C Defined "SIZEOF_MPI_COMM" to "8" Checking for size of type: MPI_Fint Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif #define MPICH_IGNORE_CXX_SEEK #define MPICH_SKIP_MPICXX 1 #define OMPI_SKIP_MPICXX 1 #include int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(MPI_Fint)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest Popping language C Defined "SIZEOF_MPI_FINT" to "4" ================================================================================ TEST configureMPITypes from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:244) TESTING: configureMPITypes from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:244) Checking for MPI Datatype handles Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif #include int main() { MPI_Aint size; int ierr; MPI_Init(0,0); ierr = MPI_Type_extent(MPI_LONG_DOUBLE, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif #include int main() { MPI_Aint size; int ierr; MPI_Init(0,0); ierr = MPI_Type_extent(MPI_LONG_DOUBLE, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest ERROR while running executable: Could not execute "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest": [o05-037:09371] [mpi::ess-ple::jrm-init-failure] [[INVALID],INVALID] Error caused by PLE. [errno:26674688] [o05-037:09371] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_errmgr_base_error_abort+0x84) [0xffffffff10e58404] [o05-037:09371] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0 [0xffffffff10e5b220] [o05-037:09371] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_init+0x120) [0xffffffff10e1aa60] [o05-037:09371] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(ompi_mpi_init+0x228) [0xffffffff10bfbe28] [o05-037:09371] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(MPI_Init+0x144) [0xffffffff10c2c804] [o05-037:09371] /opt/FJSVtclang/GM-1.2.0-20/lib64/libtrtmet_c.so.1(MPI_Init+0x2c) [0xffffffff0015d668] [o05-037:09371] /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest(main+0x14) [0x100d14] [o05-037:09371] /lib64/libc.so.6(__libc_start_main+0x194) [0xffffffff1261b81c] [o05-037:09371] /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest [0x100bac] [o05-037:09371] [mpi::ess-ple::init-failure] [[INVALID],INVALID] PLE is not yet initialized. Popping language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif #include int main() { MPI_Aint size; int ierr; MPI_Init(0,0); ierr = MPI_Type_extent(MPI_INT64_T, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif #include int main() { MPI_Aint size; int ierr; MPI_Init(0,0); ierr = MPI_Type_extent(MPI_INT64_T, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest ERROR while running executable: Could not execute "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest": [o05-037:09400] [mpi::ess-ple::jrm-init-failure] [[INVALID],INVALID] Error caused by PLE. [errno:26674688] [o05-037:09400] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_errmgr_base_error_abort+0x84) [0xffffffff10e58404] [o05-037:09400] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0 [0xffffffff10e5b220] [o05-037:09400] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_init+0x120) [0xffffffff10e1aa60] [o05-037:09400] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(ompi_mpi_init+0x228) [0xffffffff10bfbe28] [o05-037:09400] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(MPI_Init+0x144) [0xffffffff10c2c804] [o05-037:09400] /opt/FJSVtclang/GM-1.2.0-20/lib64/libtrtmet_c.so.1(MPI_Init+0x2c) [0xffffffff0015d668] [o05-037:09400] /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest(main+0x14) [0x100d14] [o05-037:09400] /lib64/libc.so.6(__libc_start_main+0x194) [0xffffffff1261b81c] [o05-037:09400] /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest [0x100bac] [o05-037:09400] [mpi::ess-ple::init-failure] [[INVALID],INVALID] PLE is not yet initialized. Popping language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif #include int main() { MPI_Aint size; int ierr; MPI_Init(0,0); ierr = MPI_Type_extent(MPI_C_DOUBLE_COMPLEX, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif #include int main() { MPI_Aint size; int ierr; MPI_Init(0,0); ierr = MPI_Type_extent(MPI_C_DOUBLE_COMPLEX, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest ERROR while running executable: Could not execute "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest": [o05-037:09429] [mpi::ess-ple::jrm-init-failure] [[INVALID],INVALID] Error caused by PLE. [errno:26674688] [o05-037:09429] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_errmgr_base_error_abort+0x84) [0xffffffff10e58404] [o05-037:09429] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0 [0xffffffff10e5b220] [o05-037:09429] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_init+0x120) [0xffffffff10e1aa60] [o05-037:09429] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(ompi_mpi_init+0x228) [0xffffffff10bfbe28] [o05-037:09429] /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(MPI_Init+0x144) [0xffffffff10c2c804] [o05-037:09429] /opt/FJSVtclang/GM-1.2.0-20/lib64/libtrtmet_c.so.1(MPI_Init+0x2c) [0xffffffff0015d668] [o05-037:09429] /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest(main+0x14) [0x100d14] [o05-037:09429] /lib64/libc.so.6(__libc_start_main+0x194) [0xffffffff1261b81c] [o05-037:09429] /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest [0x100bac] [o05-037:09429] [mpi::ess-ple::init-failure] [[INVALID],INVALID] PLE is not yet initialized. Popping language C ================================================================================ TEST configureMissingPrototypes from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:318) TESTING: configureMissingPrototypes from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:318) Checks for missing prototypes, which it adds to petscfix.h ================================================================================ TEST SGIMPICheck from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:337) TESTING: SGIMPICheck from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:337) Returns true if SGI MPI is used Checking for functions [MPI_SGI_barrier] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_SGI_barrier(); static void _check_MPI_SGI_barrier() { MPI_SGI_barrier(); } int main() { _check_MPI_SGI_barrier();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o: In function `_check_MPI_SGI_barrier': conftest.c:(.text+0x4): undefined reference to `MPI_SGI_barrier' Popping language C SGI MPI test failure ================================================================================ TEST CxxMPICheck from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:347) TESTING: CxxMPICheck from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:347) Make sure C++ can compile and link Pushing language Cxx Checking for header mpi.h Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { ; return 0; } Checking for C++ MPI_Finalize() Checking for functions [MPI_Finalize] in library [] [] Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.cc Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.cc", line 5: warning: variable "ierr" was set but never used static void _check_MPI_Finalize() { int ierr; ^ Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_MPI_Finalize() { int ierr; ierr = MPI_Finalize();; } int main() { _check_MPI_Finalize();; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language Cxx Popping language Cxx ================================================================================ TEST FortranMPICheck from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:365) TESTING: FortranMPICheck from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:365) Make sure fortran include [mpif.h] and library symbols are found Pushing language FC Checking for header mpif.h Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.F Successful compile: Source: program main #include "mpif.h" end Checking for fortran mpi_init() Checking for functions [] in library [] [] Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.F Successful compile: Source: program main #include "mpif.h" integer ierr call mpi_init(ierr) end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language FC Checking for mpi.mod Checking for functions [] in library [] [] Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.F Successful compile: Source: program main use mpi integer ierr,rank call mpi_init(ierr) call mpi_comm_rank(MPI_COMM_WORLD,rank,ierr) end Pushing language FC Popping language FC Executing: mpifrt -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -X9 -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language FC Defined "HAVE_MPI_F90MODULE" to "1" Popping language FC ================================================================================ TEST configureIO from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:390) TESTING: configureIO from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:390) Check for the functions in MPI/IO - Define HAVE_MPIIO if they are present - Some older MPI 1 implementations are missing these Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_Aint lb, extent; if (MPI_Type_get_extent(MPI_INT, &lb, &extent)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c", line 9: warning: variable "fh" is used before its value is set if (MPI_File_write_all(fh, buf, 1, MPI_INT, &status)); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c", line 9: warning: variable "buf" is used before its value is set if (MPI_File_write_all(fh, buf, 1, MPI_INT, &status)); ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_File fh; void *buf; MPI_Status status; if (MPI_File_write_all(fh, buf, 1, MPI_INT, &status)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c", line 9: warning: variable "fh" is used before its value is set if (MPI_File_read_all(fh, buf, 1, MPI_INT, &status)); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c", line 9: warning: variable "buf" is used before its value is set if (MPI_File_read_all(fh, buf, 1, MPI_INT, &status)); ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_File fh; void *buf; MPI_Status status; if (MPI_File_read_all(fh, buf, 1, MPI_INT, &status)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c", line 9: warning: variable "fh" is used before its value is set if (MPI_File_set_view(fh, disp, MPI_INT, MPI_INT, "", info)); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c", line 9: warning: variable "disp" is used before its value is set if (MPI_File_set_view(fh, disp, MPI_INT, MPI_INT, "", info)); ^ "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c", line 9: warning: variable "info" is used before its value is set if (MPI_File_set_view(fh, disp, MPI_INT, MPI_INT, "", info)); ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_File fh; MPI_Offset disp; MPI_Info info; if (MPI_File_set_view(fh, disp, MPI_INT, MPI_INT, "", info)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c", line 8: warning: variable "info" is used before its value is set if (MPI_File_open(MPI_COMM_SELF, "", 0, info, &fh)); ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_File fh; MPI_Info info; if (MPI_File_open(MPI_COMM_SELF, "", 0, info, &fh)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c", line 7: warning: variable "info" was declared but never referenced MPI_Info info; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_File fh; MPI_Info info; if (MPI_File_close(&fh)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_MPIIO" to "1" ================================================================================ TEST findMPIInc from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:452) TESTING: findMPIInc from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:452) Find MPI include paths from "mpicc -show" Executing: mpifcc -show stdout: /opt/FJSVtclang/GM-1.2.0-20/bin/fcc -Kident_mpi -mt -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lm -lnsl -lutil compilers: Checking arg /opt/FJSVtclang/GM-1.2.0-20/bin/fcc compilers: Checking arg -Kident_mpi compilers: Checking arg -mt compilers: Checking arg -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu compilers: Found include directory: /opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu compilers: Checking arg -L/opt/FJSVpxtof/sparc64fx/lib64 compilers: Checking arg -L/opt/FJSVtclang/GM-1.2.0-20/lib64 compilers: Checking arg -lmpi compilers: Checking arg -ltofucom compilers: Checking arg -ltofutop compilers: Checking arg -lm compilers: Checking arg -lnsl compilers: Checking arg -lutil ================================================================================ TEST checkMPICHorOpenMPI from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:427) TESTING: checkMPICHorOpenMPI from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:427) Determine if MPICH_NUMVERSION or OMPI_MAJOR_VERSION exist in mpi.h Used for consistency checking of MPI installation at compile time Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Possible ERROR while running compiler: exit code 512 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c", line 4: error: identifier "MPICH_NUMVERSION" is undefined int mpich_ver = MPICH_NUMVERSION; ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include int mpich_ver = MPICH_NUMVERSION; int main() { ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int ompi_major = OMPI_MAJOR_VERSION; int ompi_minor = OMPI_MINOR_VERSION; int ompi_release = OMPI_RELEASE_VERSION; int main() { ; return 0; } Source: #include "confdefs.h" #include "conffix.h" #include int ompi_major = OMPI_MAJOR_VERSION; int ompi_minor = OMPI_MINOR_VERSION; int ompi_release = OMPI_RELEASE_VERSION; Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c" #line 1 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 212 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef long ptrdiff_t; #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef int wchar_t; #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 225 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 1 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi_portable_platform.h" #line 343 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi_portable_platform.h" #line 386 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi_portable_platform.h" #line 258 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 278 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" typedef ptrdiff_t MPI_Aint; typedef long long MPI_Offset; typedef struct ompi_communicator_t *MPI_Comm; typedef struct ompi_datatype_t *MPI_Datatype; typedef struct ompi_errhandler_t *MPI_Errhandler; typedef struct ompi_file_t *MPI_File; typedef struct ompi_group_t *MPI_Group; typedef struct ompi_info_t *MPI_Info; typedef struct ompi_op_t *MPI_Op; typedef struct ompi_request_t *MPI_Request; typedef struct ompi_message_t *MPI_Message; typedef struct ompi_status_public_t MPI_Status; typedef struct ompi_win_t *MPI_Win; #pragma pack(4) struct ompi_status_public_t { int MPI_SOURCE; int MPI_TAG; int MPI_ERROR; unsigned long _cancelled : 1; unsigned long _ucount : 63; }; #pragma pack() typedef struct ompi_status_public_t ompi_status_public_t; typedef int (MPI_Copy_function)(MPI_Comm, int, void *, void *, void *, int *); typedef int (MPI_Delete_function)(MPI_Comm, int, void *, void *); typedef int (MPI_Datarep_extent_function)(MPI_Datatype, MPI_Aint *, void *); typedef int (MPI_Datarep_conversion_function)(void *, MPI_Datatype, int, void *, MPI_Offset, void *); typedef void (MPI_Comm_errhandler_function)(MPI_Comm *, int *, ...); typedef MPI_Comm_errhandler_function MPI_Comm_errhandler_fn ; typedef void (ompi_file_errhandler_fn)(MPI_File *, int *, ...); typedef ompi_file_errhandler_fn MPI_File_errhandler_fn ; typedef ompi_file_errhandler_fn MPI_File_errhandler_function; typedef void (MPI_Win_errhandler_function)(MPI_Win *, int *, ...); typedef MPI_Win_errhandler_function MPI_Win_errhandler_fn ; typedef void (MPI_Handler_function)(MPI_Comm *, int *, ...); typedef void (MPI_User_function)(void *, void *, int *, MPI_Datatype *); typedef int (MPI_Comm_copy_attr_function)(MPI_Comm, int, void *, void *, void *, int *); typedef int (MPI_Comm_delete_attr_function)(MPI_Comm, int, void *, void *); typedef int (MPI_Type_copy_attr_function)(MPI_Datatype, int, void *, void *, void *, int *); typedef int (MPI_Type_delete_attr_function)(MPI_Datatype, int, void *, void *); typedef int (MPI_Win_copy_attr_function)(MPI_Win, int, void *, void *, void *, int *); typedef int (MPI_Win_delete_attr_function)(MPI_Win, int, void *, void *); typedef int (MPI_Grequest_query_function)(void *, MPI_Status *); typedef int (MPI_Grequest_free_function)(void *); typedef int (MPI_Grequest_cancel_function)(void *, int); #line 432 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 453 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 469 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" enum { MPI_TAG_UB, MPI_HOST, MPI_IO, MPI_WTIME_IS_GLOBAL, MPI_APPNUM, MPI_LASTUSEDCODE, MPI_UNIVERSE_SIZE, MPI_WIN_BASE, MPI_WIN_SIZE, MPI_WIN_DISP_UNIT, IMPI_CLIENT_SIZE, IMPI_CLIENT_COLOR, IMPI_HOST_SIZE, IMPI_HOST_COLOR }; #line 582 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" enum { MPI_IDENT, MPI_CONGRUENT, MPI_SIMILAR, MPI_UNEQUAL }; enum { MPI_THREAD_SINGLE, MPI_THREAD_FUNNELED, MPI_THREAD_SERIALIZED, MPI_THREAD_MULTIPLE }; enum { MPI_COMBINER_NAMED, MPI_COMBINER_DUP, MPI_COMBINER_CONTIGUOUS, MPI_COMBINER_VECTOR, MPI_COMBINER_HVECTOR_INTEGER, MPI_COMBINER_HVECTOR, MPI_COMBINER_INDEXED, MPI_COMBINER_HINDEXED_INTEGER, MPI_COMBINER_HINDEXED, MPI_COMBINER_INDEXED_BLOCK, MPI_COMBINER_STRUCT_INTEGER, MPI_COMBINER_STRUCT, MPI_COMBINER_SUBARRAY, MPI_COMBINER_DARRAY, MPI_COMBINER_F90_REAL, MPI_COMBINER_F90_COMPLEX, MPI_COMBINER_F90_INTEGER, MPI_COMBINER_RESIZED, MPI_COMBINER_HINDEXED_BLOCK }; #line 649 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" int OMPI_C_MPI_TYPE_NULL_DELETE_FN( MPI_Datatype datatype, int type_keyval, void* attribute_val_out, void* extra_state ); int OMPI_C_MPI_TYPE_NULL_COPY_FN( MPI_Datatype datatype, int type_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); int OMPI_C_MPI_TYPE_DUP_FN( MPI_Datatype datatype, int type_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); int OMPI_C_MPI_COMM_NULL_DELETE_FN( MPI_Comm comm, int comm_keyval, void* attribute_val_out, void* extra_state ); int OMPI_C_MPI_COMM_NULL_COPY_FN( MPI_Comm comm, int comm_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); int OMPI_C_MPI_COMM_DUP_FN( MPI_Comm comm, int comm_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); int OMPI_C_MPI_NULL_DELETE_FN( MPI_Comm comm, int comm_keyval, void* attribute_val_out, void* extra_state ) ; int OMPI_C_MPI_NULL_COPY_FN( MPI_Comm comm, int comm_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ) ; int OMPI_C_MPI_DUP_FN( MPI_Comm comm, int comm_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ) ; int OMPI_C_MPI_WIN_NULL_DELETE_FN( MPI_Win window, int win_keyval, void* attribute_val_out, void* extra_state ); int OMPI_C_MPI_WIN_NULL_COPY_FN( MPI_Win window, int win_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); int OMPI_C_MPI_WIN_DUP_FN( MPI_Win window, int win_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); extern struct ompi_predefined_communicator_t ompi_mpi_comm_world; extern struct ompi_predefined_communicator_t ompi_mpi_comm_self; extern struct ompi_predefined_communicator_t ompi_mpi_comm_null; extern struct ompi_predefined_group_t ompi_mpi_group_empty; extern struct ompi_predefined_group_t ompi_mpi_group_null; extern struct ompi_predefined_request_t ompi_request_null; extern struct ompi_predefined_message_t ompi_message_null; extern struct ompi_predefined_message_t ompi_message_no_proc; extern struct ompi_predefined_op_t ompi_mpi_op_null; extern struct ompi_predefined_op_t ompi_mpi_op_min; extern struct ompi_predefined_op_t ompi_mpi_op_max; extern struct ompi_predefined_op_t ompi_mpi_op_sum; extern struct ompi_predefined_op_t ompi_mpi_op_prod; extern struct ompi_predefined_op_t ompi_mpi_op_land; extern struct ompi_predefined_op_t ompi_mpi_op_band; extern struct ompi_predefined_op_t ompi_mpi_op_lor; extern struct ompi_predefined_op_t ompi_mpi_op_bor; extern struct ompi_predefined_op_t ompi_mpi_op_lxor; extern struct ompi_predefined_op_t ompi_mpi_op_bxor; extern struct ompi_predefined_op_t ompi_mpi_op_maxloc; extern struct ompi_predefined_op_t ompi_mpi_op_minloc; extern struct ompi_predefined_op_t ompi_mpi_op_replace; extern struct ompi_predefined_datatype_t ompi_mpi_datatype_null; extern struct ompi_predefined_datatype_t ompi_mpi_lb ; extern struct ompi_predefined_datatype_t ompi_mpi_ub ; extern struct ompi_predefined_datatype_t ompi_mpi_char; extern struct ompi_predefined_datatype_t ompi_mpi_signed_char; extern struct ompi_predefined_datatype_t ompi_mpi_unsigned_char; extern struct ompi_predefined_datatype_t ompi_mpi_byte; extern struct ompi_predefined_datatype_t ompi_mpi_short; extern struct ompi_predefined_datatype_t ompi_mpi_unsigned_short; extern struct ompi_predefined_datatype_t ompi_mpi_int; extern struct ompi_predefined_datatype_t ompi_mpi_unsigned; extern struct ompi_predefined_datatype_t ompi_mpi_long; extern struct ompi_predefined_datatype_t ompi_mpi_unsigned_long; extern struct ompi_predefined_datatype_t ompi_mpi_long_long_int; extern struct ompi_predefined_datatype_t ompi_mpi_unsigned_long_long; extern struct ompi_predefined_datatype_t ompi_mpi_float; extern struct ompi_predefined_datatype_t ompi_mpi_double; extern struct ompi_predefined_datatype_t ompi_mpi_long_double; extern struct ompi_predefined_datatype_t ompi_mpi_wchar; extern struct ompi_predefined_datatype_t ompi_mpi_packed; extern struct ompi_predefined_datatype_t ompi_mpi_cxx_bool; extern struct ompi_predefined_datatype_t ompi_mpi_cxx_cplex; extern struct ompi_predefined_datatype_t ompi_mpi_cxx_dblcplex; extern struct ompi_predefined_datatype_t ompi_mpi_cxx_ldblcplex; extern struct ompi_predefined_datatype_t ompi_mpi_logic; extern struct ompi_predefined_datatype_t ompi_mpi_character; extern struct ompi_predefined_datatype_t ompi_mpi_integer; extern struct ompi_predefined_datatype_t ompi_mpi_real; extern struct ompi_predefined_datatype_t ompi_mpi_dblprec; extern struct ompi_predefined_datatype_t ompi_mpi_cplex; extern struct ompi_predefined_datatype_t ompi_mpi_dblcplex; extern struct ompi_predefined_datatype_t ompi_mpi_ldblcplex; extern struct ompi_predefined_datatype_t ompi_mpi_2int; extern struct ompi_predefined_datatype_t ompi_mpi_2integer; extern struct ompi_predefined_datatype_t ompi_mpi_2real; extern struct ompi_predefined_datatype_t ompi_mpi_2dblprec; extern struct ompi_predefined_datatype_t ompi_mpi_2cplex; extern struct ompi_predefined_datatype_t ompi_mpi_2dblcplex; extern struct ompi_predefined_datatype_t ompi_mpi_float_int; extern struct ompi_predefined_datatype_t ompi_mpi_double_int; extern struct ompi_predefined_datatype_t ompi_mpi_longdbl_int; extern struct ompi_predefined_datatype_t ompi_mpi_short_int; extern struct ompi_predefined_datatype_t ompi_mpi_long_int; extern struct ompi_predefined_datatype_t ompi_mpi_logical1; extern struct ompi_predefined_datatype_t ompi_mpi_logical2; extern struct ompi_predefined_datatype_t ompi_mpi_logical4; extern struct ompi_predefined_datatype_t ompi_mpi_logical8; extern struct ompi_predefined_datatype_t ompi_mpi_integer1; extern struct ompi_predefined_datatype_t ompi_mpi_integer2; extern struct ompi_predefined_datatype_t ompi_mpi_integer4; extern struct ompi_predefined_datatype_t ompi_mpi_integer8; extern struct ompi_predefined_datatype_t ompi_mpi_integer16; extern struct ompi_predefined_datatype_t ompi_mpi_real2; extern struct ompi_predefined_datatype_t ompi_mpi_real4; extern struct ompi_predefined_datatype_t ompi_mpi_real8; extern struct ompi_predefined_datatype_t ompi_mpi_real16; extern struct ompi_predefined_datatype_t ompi_mpi_complex8; extern struct ompi_predefined_datatype_t ompi_mpi_complex16; extern struct ompi_predefined_datatype_t ompi_mpi_complex32; extern struct ompi_predefined_datatype_t ompi_mpi_int8_t; extern struct ompi_predefined_datatype_t ompi_mpi_uint8_t; extern struct ompi_predefined_datatype_t ompi_mpi_int16_t; extern struct ompi_predefined_datatype_t ompi_mpi_uint16_t; extern struct ompi_predefined_datatype_t ompi_mpi_int32_t; extern struct ompi_predefined_datatype_t ompi_mpi_uint32_t; extern struct ompi_predefined_datatype_t ompi_mpi_int64_t; extern struct ompi_predefined_datatype_t ompi_mpi_uint64_t; extern struct ompi_predefined_datatype_t ompi_mpi_aint; extern struct ompi_predefined_datatype_t ompi_mpi_offset; extern struct ompi_predefined_datatype_t ompi_mpi_c_bool; extern struct ompi_predefined_datatype_t ompi_mpi_c_complex; extern struct ompi_predefined_datatype_t ompi_mpi_c_float_complex; extern struct ompi_predefined_datatype_t ompi_mpi_c_double_complex; extern struct ompi_predefined_datatype_t ompi_mpi_c_long_double_complex; extern struct ompi_predefined_errhandler_t ompi_mpi_errhandler_null; extern struct ompi_predefined_errhandler_t ompi_mpi_errors_are_fatal; extern struct ompi_predefined_errhandler_t ompi_mpi_errors_return; extern struct ompi_predefined_win_t ompi_mpi_win_null; extern struct ompi_predefined_file_t ompi_mpi_file_null; extern struct ompi_predefined_info_t ompi_mpi_info_null; extern int *MPI_F_STATUS_IGNORE; extern int *MPI_F_STATUSES_IGNORE; #line 921 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 954 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 1011 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 1038 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" int MPI_Abort(MPI_Comm comm, int errorcode); int MPI_Accumulate(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Op op, MPI_Win win); int MPI_Add_error_class(int *errorclass); int MPI_Add_error_code(int errorclass, int *errorcode); int MPI_Add_error_string(int errorcode, char *string); int MPI_Address(void *location, MPI_Aint *address) ; int MPI_Allgather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm); int MPI_Iallgather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int MPI_Allgatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, MPI_Comm comm); int MPI_Iallgatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int MPI_Alloc_mem(MPI_Aint size, MPI_Info info, void *baseptr); int MPI_Allreduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int MPI_Iallreduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int MPI_Alltoall(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm); int MPI_Ialltoall(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int MPI_Alltoallv(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype recvtype, MPI_Comm comm); int MPI_Ialltoallv(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int MPI_Alltoallw(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype *sendtypes, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype *recvtypes, MPI_Comm comm); int MPI_Ialltoallw(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype *sendtypes, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype *recvtypes, MPI_Comm comm, MPI_Request *request); int MPI_Attr_delete(MPI_Comm comm, int keyval) ; int MPI_Attr_get(MPI_Comm comm, int keyval, void *attribute_val, int *flag) ; int MPI_Attr_put(MPI_Comm comm, int keyval, void *attribute_val) ; int MPI_Barrier(MPI_Comm comm); int MPI_Ibarrier(MPI_Comm comm, MPI_Request *request); int MPI_Bcast(void *buffer, int count, MPI_Datatype datatype, int root, MPI_Comm comm); int MPI_Bsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int MPI_Ibcast(void *buffer, int count, MPI_Datatype datatype, int root, MPI_Comm comm, MPI_Request *request); int MPI_Bsend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Buffer_attach(void *buffer, int size); int MPI_Buffer_detach(void *buffer, int *size); int MPI_Cancel(MPI_Request *request); int MPI_Cart_coords(MPI_Comm comm, int rank, int maxdims, int *coords); int MPI_Cart_create(MPI_Comm old_comm, int ndims, int *dims, int *periods, int reorder, MPI_Comm *comm_cart); int MPI_Cart_get(MPI_Comm comm, int maxdims, int *dims, int *periods, int *coords); int MPI_Cart_map(MPI_Comm comm, int ndims, int *dims, int *periods, int *newrank); int MPI_Cart_rank(MPI_Comm comm, int *coords, int *rank); int MPI_Cart_shift(MPI_Comm comm, int direction, int disp, int *rank_source, int *rank_dest); int MPI_Cart_sub(MPI_Comm comm, int *remain_dims, MPI_Comm *new_comm); int MPI_Cartdim_get(MPI_Comm comm, int *ndims); int MPI_Close_port(char *port_name); int MPI_Comm_accept(char *port_name, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *newcomm); int MPI_Comm_c2f(MPI_Comm comm); int MPI_Comm_call_errhandler(MPI_Comm comm, int errorcode); int MPI_Comm_compare(MPI_Comm comm1, MPI_Comm comm2, int *result); int MPI_Comm_connect(char *port_name, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *newcomm); int MPI_Comm_create_errhandler(MPI_Comm_errhandler_function *function, MPI_Errhandler *errhandler); int MPI_Comm_create_keyval(MPI_Comm_copy_attr_function *comm_copy_attr_fn, MPI_Comm_delete_attr_function *comm_delete_attr_fn, int *comm_keyval, void *extra_state); int MPI_Comm_create(MPI_Comm comm, MPI_Group group, MPI_Comm *newcomm); int MPI_Comm_delete_attr(MPI_Comm comm, int comm_keyval); int MPI_Comm_disconnect(MPI_Comm *comm); int MPI_Comm_dup(MPI_Comm comm, MPI_Comm *newcomm); MPI_Comm MPI_Comm_f2c(int comm); int MPI_Comm_free_keyval(int *comm_keyval); int MPI_Comm_free(MPI_Comm *comm); int MPI_Comm_get_attr(MPI_Comm comm, int comm_keyval, void *attribute_val, int *flag); int MPI_Dist_graph_create(MPI_Comm comm_old, int n, int nodes[], int degrees[], int targets[], int weights[], MPI_Info info, int reorder, MPI_Comm * newcomm); int MPI_Dist_graph_create_adjacent(MPI_Comm comm_old, int indegree, int sources[], int sourceweights[], int outdegree, int destinations[], int destweights[], MPI_Info info, int reorder, MPI_Comm *comm_dist_graph); int MPI_Dist_graph_neighbors(MPI_Comm comm, int maxindegree, int sources[], int sourceweights[], int maxoutdegree, int destinations[], int destweights[]); int MPI_Dist_graph_neighbors_count(MPI_Comm comm, int *inneighbors, int *outneighbors, int *weighted); int MPI_Comm_get_errhandler(MPI_Comm comm, MPI_Errhandler *erhandler); int MPI_Comm_get_name(MPI_Comm comm, char *comm_name, int *resultlen); int MPI_Comm_get_parent(MPI_Comm *parent); int MPI_Comm_group(MPI_Comm comm, MPI_Group *group); int MPI_Comm_join(int fd, MPI_Comm *intercomm); int MPI_Comm_rank(MPI_Comm comm, int *rank); int MPI_Comm_remote_group(MPI_Comm comm, MPI_Group *group); int MPI_Comm_remote_size(MPI_Comm comm, int *size); int MPI_Comm_set_attr(MPI_Comm comm, int comm_keyval, void *attribute_val); int MPI_Comm_set_errhandler(MPI_Comm comm, MPI_Errhandler errhandler); int MPI_Comm_set_name(MPI_Comm comm, char *comm_name); int MPI_Comm_size(MPI_Comm comm, int *size); int MPI_Comm_spawn(char *command, char **argv, int maxprocs, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *intercomm, int *array_of_errcodes); int MPI_Comm_spawn_multiple(int count, char **array_of_commands, char ***array_of_argv, int *array_of_maxprocs, MPI_Info *array_of_info, int root, MPI_Comm comm, MPI_Comm *intercomm, int *array_of_errcodes); int MPI_Comm_split(MPI_Comm comm, int color, int key, MPI_Comm *newcomm); int MPI_Comm_test_inter(MPI_Comm comm, int *flag); int MPI_Dims_create(int nnodes, int ndims, int *dims); int MPI_Errhandler_c2f(MPI_Errhandler errhandler); int MPI_Errhandler_create(MPI_Handler_function *function, MPI_Errhandler *errhandler) ; MPI_Errhandler MPI_Errhandler_f2c(int errhandler); int MPI_Errhandler_free(MPI_Errhandler *errhandler); int MPI_Errhandler_get(MPI_Comm comm, MPI_Errhandler *errhandler) ; int MPI_Errhandler_set(MPI_Comm comm, MPI_Errhandler errhandler) ; int MPI_Error_class(int errorcode, int *errorclass); int MPI_Error_string(int errorcode, char *string, int *resultlen); int MPI_Exscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int MPI_Iexscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int MPI_File_c2f(MPI_File file); MPI_File MPI_File_f2c(int file); int MPI_File_call_errhandler(MPI_File fh, int errorcode); int MPI_File_create_errhandler(MPI_File_errhandler_function *function, MPI_Errhandler *errhandler); int MPI_File_set_errhandler( MPI_File file, MPI_Errhandler errhandler); int MPI_File_get_errhandler( MPI_File file, MPI_Errhandler *errhandler); int MPI_File_open(MPI_Comm comm, char *filename, int amode, MPI_Info info, MPI_File *fh); int MPI_File_close(MPI_File *fh); int MPI_File_delete(char *filename, MPI_Info info); int MPI_File_set_size(MPI_File fh, MPI_Offset size); int MPI_File_preallocate(MPI_File fh, MPI_Offset size); int MPI_File_get_size(MPI_File fh, MPI_Offset *size); int MPI_File_get_group(MPI_File fh, MPI_Group *group); int MPI_File_get_amode(MPI_File fh, int *amode); int MPI_File_set_info(MPI_File fh, MPI_Info info); int MPI_File_get_info(MPI_File fh, MPI_Info *info_used); int MPI_File_set_view(MPI_File fh, MPI_Offset disp, MPI_Datatype etype, MPI_Datatype filetype, char *datarep, MPI_Info info); int MPI_File_get_view(MPI_File fh, MPI_Offset *disp, MPI_Datatype *etype, MPI_Datatype *filetype, char *datarep); int MPI_File_read_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_read_at_all(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write_at_all(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_iread_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_iwrite_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_read(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_read_all(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write_all(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_iread(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_iwrite(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_seek(MPI_File fh, MPI_Offset offset, int whence); int MPI_File_get_position(MPI_File fh, MPI_Offset *offset); int MPI_File_get_byte_offset(MPI_File fh, MPI_Offset offset, MPI_Offset *disp); int MPI_File_read_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_iread_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_iwrite_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int MPI_File_read_ordered(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_write_ordered(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int MPI_File_seek_shared(MPI_File fh, MPI_Offset offset, int whence); int MPI_File_get_position_shared(MPI_File fh, MPI_Offset *offset); int MPI_File_read_at_all_begin(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype); int MPI_File_read_at_all_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_write_at_all_begin(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype); int MPI_File_write_at_all_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_read_all_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int MPI_File_read_all_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_write_all_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int MPI_File_write_all_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_read_ordered_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int MPI_File_read_ordered_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_write_ordered_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int MPI_File_write_ordered_end(MPI_File fh, void *buf, MPI_Status *status); int MPI_File_get_type_extent(MPI_File fh, MPI_Datatype datatype, MPI_Aint *extent); int MPI_File_set_atomicity(MPI_File fh, int flag); int MPI_File_get_atomicity(MPI_File fh, int *flag); int MPI_File_sync(MPI_File fh); int MPI_Finalize(void); int MPI_Finalized(int *flag); int MPI_Free_mem(void *base); int MPI_Gather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int MPI_Igather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int MPI_Gatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, int root, MPI_Comm comm); int MPI_Igatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int MPI_Get_address(void *location, MPI_Aint *address); int MPI_Get_count(MPI_Status *status, MPI_Datatype datatype, int *count); int MPI_Get_elements(MPI_Status *status, MPI_Datatype datatype, int *count); int MPI_Get(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Win win); int MPI_Get_processor_name(char *name, int *resultlen); int MPI_Get_version(int *version, int *subversion); int MPI_Graph_create(MPI_Comm comm_old, int nnodes, int *index, int *edges, int reorder, MPI_Comm *comm_graph); int MPI_Graph_get(MPI_Comm comm, int maxindex, int maxedges, int *index, int *edges); int MPI_Graph_map(MPI_Comm comm, int nnodes, int *index, int *edges, int *newrank); int MPI_Graph_neighbors_count(MPI_Comm comm, int rank, int *nneighbors); int MPI_Graph_neighbors(MPI_Comm comm, int rank, int maxneighbors, int *neighbors); int MPI_Graphdims_get(MPI_Comm comm, int *nnodes, int *nedges); int MPI_Grequest_complete(MPI_Request request); int MPI_Grequest_start(MPI_Grequest_query_function *query_fn, MPI_Grequest_free_function *free_fn, MPI_Grequest_cancel_function *cancel_fn, void *extra_state, MPI_Request *request); int MPI_Group_c2f(MPI_Group group); int MPI_Group_compare(MPI_Group group1, MPI_Group group2, int *result); int MPI_Group_difference(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int MPI_Group_excl(MPI_Group group, int n, int *ranks, MPI_Group *newgroup); MPI_Group MPI_Group_f2c(int group); int MPI_Group_free(MPI_Group *group); int MPI_Group_incl(MPI_Group group, int n, int *ranks, MPI_Group *newgroup); int MPI_Group_intersection(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int MPI_Group_range_excl(MPI_Group group, int n, int ranges[][3], MPI_Group *newgroup); int MPI_Group_range_incl(MPI_Group group, int n, int ranges[][3], MPI_Group *newgroup); int MPI_Group_rank(MPI_Group group, int *rank); int MPI_Group_size(MPI_Group group, int *size); int MPI_Group_translate_ranks(MPI_Group group1, int n, int *ranks1, MPI_Group group2, int *ranks2); int MPI_Group_union(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int MPI_Ibsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Improbe(int source, int tag, MPI_Comm comm, int *flag, MPI_Message *message, MPI_Status *status); int MPI_Imrecv(void *buf, int count, MPI_Datatype type, MPI_Message *message, MPI_Request *request); int MPI_Info_c2f(MPI_Info info); int MPI_Info_create(MPI_Info *info); int MPI_Info_delete(MPI_Info info, char *key); int MPI_Info_dup(MPI_Info info, MPI_Info *newinfo); MPI_Info MPI_Info_f2c(int info); int MPI_Info_free(MPI_Info *info); int MPI_Info_get(MPI_Info info, char *key, int valuelen, char *value, int *flag); int MPI_Info_get_nkeys(MPI_Info info, int *nkeys); int MPI_Info_get_nthkey(MPI_Info info, int n, char *key); int MPI_Info_get_valuelen(MPI_Info info, char *key, int *valuelen, int *flag); int MPI_Info_set(MPI_Info info, char *key, char *value); int MPI_Init(int *argc, char ***argv); int MPI_Initialized(int *flag); int MPI_Init_thread(int *argc, char ***argv, int required, int *provided); int MPI_Intercomm_create(MPI_Comm local_comm, int local_leader, MPI_Comm bridge_comm, int remote_leader, int tag, MPI_Comm *newintercomm); int MPI_Intercomm_merge(MPI_Comm intercomm, int high, MPI_Comm *newintercomm); int MPI_Iprobe(int source, int tag, MPI_Comm comm, int *flag, MPI_Status *status); int MPI_Irecv(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Irsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Isend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Issend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Is_thread_main(int *flag); int MPI_Keyval_create(MPI_Copy_function *copy_fn, MPI_Delete_function *delete_fn, int *keyval, void *extra_state) ; int MPI_Keyval_free(int *keyval) ; int MPI_Lookup_name(char *service_name, MPI_Info info, char *port_name); int MPI_Message_c2f(MPI_Message message); MPI_Message MPI_Message_f2c(int message); int MPI_Mprobe(int source, int tag, MPI_Comm comm, MPI_Message *message, MPI_Status *status); int MPI_Mrecv(void *buf, int count, MPI_Datatype type, MPI_Message *message, MPI_Status *status); int MPI_Op_c2f(MPI_Op op); int MPI_Op_commutative(MPI_Op op, int *commute); int MPI_Op_create(MPI_User_function *function, int commute, MPI_Op *op); int MPI_Open_port(MPI_Info info, char *port_name); MPI_Op MPI_Op_f2c(int op); int MPI_Op_free(MPI_Op *op); int MPI_Pack_external(char *datarep, void *inbuf, int incount, MPI_Datatype datatype, void *outbuf, MPI_Aint outsize, MPI_Aint *position); int MPI_Pack_external_size(char *datarep, int incount, MPI_Datatype datatype, MPI_Aint *size); int MPI_Pack(void *inbuf, int incount, MPI_Datatype datatype, void *outbuf, int outsize, int *position, MPI_Comm comm); int MPI_Pack_size(int incount, MPI_Datatype datatype, MPI_Comm comm, int *size); int MPI_Pcontrol(const int level, ...); int MPI_Probe(int source, int tag, MPI_Comm comm, MPI_Status *status); int MPI_Publish_name(char *service_name, MPI_Info info, char *port_name); int MPI_Put(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Win win); int MPI_Query_thread(int *provided); int MPI_Recv_init(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Recv(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Status *status); int MPI_Reduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, int root, MPI_Comm comm); int MPI_Ireduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, int root, MPI_Comm comm, MPI_Request *request); int MPI_Reduce_local(void *inbuf, void *inoutbuf, int count, MPI_Datatype datatype, MPI_Op op); int MPI_Reduce_scatter(void *sendbuf, void *recvbuf, int *recvcounts, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int MPI_Ireduce_scatter(void *sendbuf, void *recvbuf, int *recvcounts, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int MPI_Reduce_scatter_block(void *sendbuf, void *recvbuf, int recvcount, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int MPI_Ireduce_scatter_block(void *sendbuf, void *recvbuf, int recvcount, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int MPI_Register_datarep(char *datarep, MPI_Datarep_conversion_function *read_conversion_fn, MPI_Datarep_conversion_function *write_conversion_fn, MPI_Datarep_extent_function *dtype_file_extent_fn, void *extra_state); int MPI_Request_c2f(MPI_Request request); MPI_Request MPI_Request_f2c(int request); int MPI_Request_free(MPI_Request *request); int MPI_Request_get_status(MPI_Request request, int *flag, MPI_Status *status); int MPI_Rsend(void *ibuf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int MPI_Rsend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Scan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int MPI_Iscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int MPI_Scatter(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int MPI_Iscatter(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int MPI_Scatterv(void *sendbuf, int *sendcounts, int *displs, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int MPI_Iscatterv(void *sendbuf, int *sendcounts, int *displs, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int MPI_Send_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Send(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int MPI_Sendrecv(void *sendbuf, int sendcount, MPI_Datatype sendtype, int dest, int sendtag, void *recvbuf, int recvcount, MPI_Datatype recvtype, int source, int recvtag, MPI_Comm comm, MPI_Status *status); int MPI_Sendrecv_replace(void * buf, int count, MPI_Datatype datatype, int dest, int sendtag, int source, int recvtag, MPI_Comm comm, MPI_Status *status); int MPI_Ssend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int MPI_Ssend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int MPI_Start(MPI_Request *request); int MPI_Startall(int count, MPI_Request *array_of_requests); int MPI_Status_c2f(MPI_Status *c_status, int *f_status); int MPI_Status_f2c(int *f_status, MPI_Status *c_status); int MPI_Status_set_cancelled(MPI_Status *status, int flag); int MPI_Status_set_elements(MPI_Status *status, MPI_Datatype datatype, int count); int MPI_Testall(int count, MPI_Request array_of_requests[], int *flag, MPI_Status array_of_statuses[]); int MPI_Testany(int count, MPI_Request array_of_requests[], int *index, int *flag, MPI_Status *status); int MPI_Test(MPI_Request *request, int *flag, MPI_Status *status); int MPI_Test_cancelled(MPI_Status *status, int *flag); int MPI_Testsome(int incount, MPI_Request array_of_requests[], int *outcount, int array_of_indices[], MPI_Status array_of_statuses[]); int MPI_Topo_test(MPI_Comm comm, int *status); int MPI_Type_c2f(MPI_Datatype datatype); int MPI_Type_commit(MPI_Datatype *type); int MPI_Type_contiguous(int count, MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_darray(int size, int rank, int ndims, int gsize_array[], int distrib_array[], int darg_array[], int psize_array[], int order, MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_f90_complex(int p, int r, MPI_Datatype *newtype); int MPI_Type_create_f90_integer(int r, MPI_Datatype *newtype); int MPI_Type_create_f90_real(int p, int r, MPI_Datatype *newtype); int MPI_Type_create_hindexed(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_hvector(int count, int blocklength, MPI_Aint stride, MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_keyval(MPI_Type_copy_attr_function *type_copy_attr_fn, MPI_Type_delete_attr_function *type_delete_attr_fn, int *type_keyval, void *extra_state); int MPI_Type_create_indexed_block(int count, int blocklength, int array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_struct(int count, int array_of_block_lengths[], MPI_Aint array_of_displacements[], MPI_Datatype array_of_types[], MPI_Datatype *newtype); int MPI_Type_create_subarray(int ndims, int size_array[], int subsize_array[], int start_array[], int order, MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_create_resized(MPI_Datatype oldtype, MPI_Aint lb, MPI_Aint extent, MPI_Datatype *newtype); int MPI_Type_delete_attr(MPI_Datatype type, int type_keyval); int MPI_Type_dup(MPI_Datatype type, MPI_Datatype *newtype); int MPI_Type_extent(MPI_Datatype type, MPI_Aint *extent) ; int MPI_Type_free(MPI_Datatype *type); int MPI_Type_free_keyval(int *type_keyval); MPI_Datatype MPI_Type_f2c(int datatype); int MPI_Type_get_attr(MPI_Datatype type, int type_keyval, void *attribute_val, int *flag); int MPI_Type_get_contents(MPI_Datatype mtype, int max_integers, int max_addresses, int max_datatypes, int array_of_integers[], MPI_Aint array_of_addresses[], MPI_Datatype array_of_datatypes[]); int MPI_Type_get_envelope(MPI_Datatype type, int *num_integers, int *num_addresses, int *num_datatypes, int *combiner); int MPI_Type_get_extent(MPI_Datatype type, MPI_Aint *lb, MPI_Aint *extent); int MPI_Type_get_name(MPI_Datatype type, char *type_name, int *resultlen); int MPI_Type_get_true_extent(MPI_Datatype datatype, MPI_Aint *true_lb, MPI_Aint *true_extent); int MPI_Type_hindexed(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype) ; int MPI_Type_hvector(int count, int blocklength, MPI_Aint stride, MPI_Datatype oldtype, MPI_Datatype *newtype) ; int MPI_Type_indexed(int count, int array_of_blocklengths[], int array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Type_lb(MPI_Datatype type, MPI_Aint *lb) ; int MPI_Type_match_size(int typeclass, int size, MPI_Datatype *type); int MPI_Type_set_attr(MPI_Datatype type, int type_keyval, void *attr_val); int MPI_Type_set_name(MPI_Datatype type, char *type_name); int MPI_Type_size(MPI_Datatype type, int *size); int MPI_Type_struct(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype array_of_types[], MPI_Datatype *newtype) ; int MPI_Type_ub(MPI_Datatype mtype, MPI_Aint *ub) ; int MPI_Type_vector(int count, int blocklength, int stride, MPI_Datatype oldtype, MPI_Datatype *newtype); int MPI_Unpack(void *inbuf, int insize, int *position, void *outbuf, int outcount, MPI_Datatype datatype, MPI_Comm comm); int MPI_Unpublish_name(char *service_name, MPI_Info info, char *port_name); int MPI_Unpack_external (char *datarep, void *inbuf, MPI_Aint insize, MPI_Aint *position, void *outbuf, int outcount, MPI_Datatype datatype); int MPI_Waitall(int count, MPI_Request *array_of_requests, MPI_Status *array_of_statuses); int MPI_Waitany(int count, MPI_Request *array_of_requests, int *index, MPI_Status *status); int MPI_Wait(MPI_Request *request, MPI_Status *status); int MPI_Waitsome(int incount, MPI_Request *array_of_requests, int *outcount, int *array_of_indices, MPI_Status *array_of_statuses); int MPI_Win_c2f(MPI_Win win); int MPI_Win_call_errhandler(MPI_Win win, int errorcode); int MPI_Win_complete(MPI_Win win); int MPI_Win_create(void *base, MPI_Aint size, int disp_unit, MPI_Info info, MPI_Comm comm, MPI_Win *win); int MPI_Win_create_errhandler(MPI_Win_errhandler_function *function, MPI_Errhandler *errhandler); int MPI_Win_create_keyval(MPI_Win_copy_attr_function *win_copy_attr_fn, MPI_Win_delete_attr_function *win_delete_attr_fn, int *win_keyval, void *extra_state); int MPI_Win_delete_attr(MPI_Win win, int win_keyval); MPI_Win MPI_Win_f2c(int win); int MPI_Win_fence(int assert, MPI_Win win); int MPI_Win_free(MPI_Win *win); int MPI_Win_free_keyval(int *win_keyval); int MPI_Win_get_attr(MPI_Win win, int win_keyval, void *attribute_val, int *flag); int MPI_Win_get_errhandler(MPI_Win win, MPI_Errhandler *errhandler); int MPI_Win_get_group(MPI_Win win, MPI_Group *group); int MPI_Win_get_name(MPI_Win win, char *win_name, int *resultlen); int MPI_Win_lock(int lock_type, int rank, int assert, MPI_Win win); int MPI_Win_post(MPI_Group group, int assert, MPI_Win win); int MPI_Win_set_attr(MPI_Win win, int win_keyval, void *attribute_val); int MPI_Win_set_errhandler(MPI_Win win, MPI_Errhandler errhandler); int MPI_Win_set_name(MPI_Win win, char *win_name); int MPI_Win_start(MPI_Group group, int assert, MPI_Win win); int MPI_Win_test(MPI_Win win, int *flag); int MPI_Win_unlock(int rank, MPI_Win win); int MPI_Win_wait(MPI_Win win); double MPI_Wtick(void); double MPI_Wtime(void); int PMPI_Abort(MPI_Comm comm, int errorcode); int PMPI_Accumulate(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Op op, MPI_Win win); int PMPI_Add_error_class(int *errorclass); int PMPI_Add_error_code(int errorclass, int *errorcode); int PMPI_Add_error_string(int errorcode, char *string); int PMPI_Address(void *location, MPI_Aint *address) ; int PMPI_Allgather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm); int PMPI_Iallgather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int PMPI_Allgatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, MPI_Comm comm); int PMPI_Iallgatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int PMPI_Alloc_mem(MPI_Aint size, MPI_Info info, void *baseptr); int PMPI_Allreduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int PMPI_Iallreduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int PMPI_Alltoall(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm); int PMPI_Ialltoall(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int PMPI_Alltoallv(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype recvtype, MPI_Comm comm); int PMPI_Ialltoallv(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype recvtype, MPI_Comm comm, MPI_Request *request); int PMPI_Alltoallw(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype *sendtypes, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype *recvtypes, MPI_Comm comm); int PMPI_Ialltoallw(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype *sendtypes, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype *recvtypes, MPI_Comm comm, MPI_Request *request); int PMPI_Attr_delete(MPI_Comm comm, int keyval) ; int PMPI_Attr_get(MPI_Comm comm, int keyval, void *attribute_val, int *flag) ; int PMPI_Dist_graph_create(MPI_Comm comm_old, int n, int nodes[], int degrees[], int targets[], int weights[], MPI_Info info, int reorder, MPI_Comm * newcomm); int PMPI_Dist_graph_create_adjacent(MPI_Comm comm_old, int indegree, int sources[], int sourceweights[], int outdegree, int destinations[], int destweights[], MPI_Info info, int reorder, MPI_Comm *comm_dist_graph); int PMPI_Dist_graph_neighbors(MPI_Comm comm, int maxindegree, int sources[], int sourceweights[], int maxoutdegree, int destinations[], int destweights[]); int PMPI_Dist_graph_neighbors_count(MPI_Comm comm, int *inneighbors, int *outneighbors, int *weighted); int PMPI_Attr_put(MPI_Comm comm, int keyval, void *attribute_val) ; int PMPI_Barrier(MPI_Comm comm); int PMPI_Ibarrier(MPI_Comm comm, MPI_Request *request); int PMPI_Bcast(void *buffer, int count, MPI_Datatype datatype, int root, MPI_Comm comm); int PMPI_Ibcast(void *buffer, int count, MPI_Datatype datatype, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Bsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int PMPI_Bsend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Buffer_attach(void *buffer, int size); int PMPI_Buffer_detach(void *buffer, int *size); int PMPI_Cancel(MPI_Request *request); int PMPI_Cart_coords(MPI_Comm comm, int rank, int maxdims, int *coords); int PMPI_Cart_create(MPI_Comm old_comm, int ndims, int *dims, int *periods, int reorder, MPI_Comm *comm_cart); int PMPI_Cart_get(MPI_Comm comm, int maxdims, int *dims, int *periods, int *coords); int PMPI_Cart_map(MPI_Comm comm, int ndims, int *dims, int *periods, int *newrank); int PMPI_Cart_rank(MPI_Comm comm, int *coords, int *rank); int PMPI_Cart_shift(MPI_Comm comm, int direction, int disp, int *rank_source, int *rank_dest); int PMPI_Cart_sub(MPI_Comm comm, int *remain_dims, MPI_Comm *new_comm); int PMPI_Cartdim_get(MPI_Comm comm, int *ndims); int PMPI_Close_port(char *port_name); int PMPI_Comm_accept(char *port_name, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *newcomm); int PMPI_Comm_c2f(MPI_Comm comm); int PMPI_Comm_call_errhandler(MPI_Comm comm, int errorcode); int PMPI_Comm_compare(MPI_Comm comm1, MPI_Comm comm2, int *result); int PMPI_Comm_connect(char *port_name, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *newcomm); int PMPI_Comm_create_errhandler(MPI_Comm_errhandler_function *function, MPI_Errhandler *errhandler); int PMPI_Comm_create_keyval(MPI_Comm_copy_attr_function *comm_copy_attr_fn, MPI_Comm_delete_attr_function *comm_delete_attr_fn, int *comm_keyval, void *extra_state); int PMPI_Comm_create(MPI_Comm comm, MPI_Group group, MPI_Comm *newcomm); int PMPI_Comm_delete_attr(MPI_Comm comm, int comm_keyval); int PMPI_Comm_disconnect(MPI_Comm *comm); int PMPI_Comm_dup(MPI_Comm comm, MPI_Comm *newcomm); MPI_Comm PMPI_Comm_f2c(int comm); int PMPI_Comm_free_keyval(int *comm_keyval); int PMPI_Comm_free(MPI_Comm *comm); int PMPI_Comm_get_attr(MPI_Comm comm, int comm_keyval, void *attribute_val, int *flag); int PMPI_Comm_get_errhandler(MPI_Comm comm, MPI_Errhandler *erhandler); int PMPI_Comm_get_name(MPI_Comm comm, char *comm_name, int *resultlen); int PMPI_Comm_get_parent(MPI_Comm *parent); int PMPI_Comm_group(MPI_Comm comm, MPI_Group *group); int PMPI_Comm_join(int fd, MPI_Comm *intercomm); int PMPI_Comm_rank(MPI_Comm comm, int *rank); int PMPI_Comm_remote_group(MPI_Comm comm, MPI_Group *group); int PMPI_Comm_remote_size(MPI_Comm comm, int *size); int PMPI_Comm_set_attr(MPI_Comm comm, int comm_keyval, void *attribute_val); int PMPI_Comm_set_errhandler(MPI_Comm comm, MPI_Errhandler errhandler); int PMPI_Comm_set_name(MPI_Comm comm, char *comm_name); int PMPI_Comm_size(MPI_Comm comm, int *size); int PMPI_Comm_spawn(char *command, char **argv, int maxprocs, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *intercomm, int *array_of_errcodes); int PMPI_Comm_spawn_multiple(int count, char **array_of_commands, char ***array_of_argv, int *array_of_maxprocs, MPI_Info *array_of_info, int root, MPI_Comm comm, MPI_Comm *intercomm, int *array_of_errcodes); int PMPI_Comm_split(MPI_Comm comm, int color, int key, MPI_Comm *newcomm); int PMPI_Comm_test_inter(MPI_Comm comm, int *flag); int PMPI_Dims_create(int nnodes, int ndims, int *dims); int PMPI_Errhandler_c2f(MPI_Errhandler errhandler); int PMPI_Errhandler_create(MPI_Handler_function *function, MPI_Errhandler *errhandler) ; MPI_Errhandler PMPI_Errhandler_f2c(int errhandler); int PMPI_Errhandler_free(MPI_Errhandler *errhandler); int PMPI_Errhandler_get(MPI_Comm comm, MPI_Errhandler *errhandler) ; int PMPI_Errhandler_set(MPI_Comm comm, MPI_Errhandler errhandler) ; int PMPI_Error_class(int errorcode, int *errorclass); int PMPI_Error_string(int errorcode, char *string, int *resultlen); int PMPI_Exscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int PMPI_Iexscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int PMPI_File_c2f(MPI_File file); MPI_File PMPI_File_f2c(int file); int PMPI_File_call_errhandler(MPI_File fh, int errorcode); int PMPI_File_create_errhandler(MPI_File_errhandler_function *function, MPI_Errhandler *errhandler); int PMPI_File_set_errhandler( MPI_File file, MPI_Errhandler errhandler); int PMPI_File_get_errhandler( MPI_File file, MPI_Errhandler *errhandler); int PMPI_File_open(MPI_Comm comm, char *filename, int amode, MPI_Info info, MPI_File *fh); int PMPI_File_close(MPI_File *fh); int PMPI_File_delete(char *filename, MPI_Info info); int PMPI_File_set_size(MPI_File fh, MPI_Offset size); int PMPI_File_preallocate(MPI_File fh, MPI_Offset size); int PMPI_File_get_size(MPI_File fh, MPI_Offset *size); int PMPI_File_get_group(MPI_File fh, MPI_Group *group); int PMPI_File_get_amode(MPI_File fh, int *amode); int PMPI_File_set_info(MPI_File fh, MPI_Info info); int PMPI_File_get_info(MPI_File fh, MPI_Info *info_used); int PMPI_File_set_view(MPI_File fh, MPI_Offset disp, MPI_Datatype etype, MPI_Datatype filetype, char *datarep, MPI_Info info); int PMPI_File_get_view(MPI_File fh, MPI_Offset *disp, MPI_Datatype *etype, MPI_Datatype *filetype, char *datarep); int PMPI_File_read_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_read_at_all(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write_at_all(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_iread_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_iwrite_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_read(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_read_all(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write_all(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_iread(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_iwrite(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_seek(MPI_File fh, MPI_Offset offset, int whence); int PMPI_File_get_position(MPI_File fh, MPI_Offset *offset); int PMPI_File_get_byte_offset(MPI_File fh, MPI_Offset offset, MPI_Offset *disp); int PMPI_File_read_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_iread_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_iwrite_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); int PMPI_File_read_ordered(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_write_ordered(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); int PMPI_File_seek_shared(MPI_File fh, MPI_Offset offset, int whence); int PMPI_File_get_position_shared(MPI_File fh, MPI_Offset *offset); int PMPI_File_read_at_all_begin(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype); int PMPI_File_read_at_all_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_write_at_all_begin(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype); int PMPI_File_write_at_all_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_read_all_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int PMPI_File_read_all_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_write_all_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int PMPI_File_write_all_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_read_ordered_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int PMPI_File_read_ordered_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_write_ordered_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); int PMPI_File_write_ordered_end(MPI_File fh, void *buf, MPI_Status *status); int PMPI_File_get_type_extent(MPI_File fh, MPI_Datatype datatype, MPI_Aint *extent); int PMPI_File_set_atomicity(MPI_File fh, int flag); int PMPI_File_get_atomicity(MPI_File fh, int *flag); int PMPI_File_sync(MPI_File fh); int PMPI_Finalize(void); int PMPI_Finalized(int *flag); int PMPI_Free_mem(void *base); int PMPI_Gather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int PMPI_Igather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Gatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, int root, MPI_Comm comm); int PMPI_Igatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Get_address(void *location, MPI_Aint *address); int PMPI_Get_count(MPI_Status *status, MPI_Datatype datatype, int *count); int PMPI_Get_elements(MPI_Status *status, MPI_Datatype datatype, int *count); int PMPI_Get(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Win win); int PMPI_Get_processor_name(char *name, int *resultlen); int PMPI_Get_version(int *version, int *subversion); int PMPI_Graph_create(MPI_Comm comm_old, int nnodes, int *index, int *edges, int reorder, MPI_Comm *comm_graph); int PMPI_Graph_get(MPI_Comm comm, int maxindex, int maxedges, int *index, int *edges); int PMPI_Graph_map(MPI_Comm comm, int nnodes, int *index, int *edges, int *newrank); int PMPI_Graph_neighbors_count(MPI_Comm comm, int rank, int *nneighbors); int PMPI_Graph_neighbors(MPI_Comm comm, int rank, int maxneighbors, int *neighbors); int PMPI_Graphdims_get(MPI_Comm comm, int *nnodes, int *nedges); int PMPI_Grequest_complete(MPI_Request request); int PMPI_Grequest_start(MPI_Grequest_query_function *query_fn, MPI_Grequest_free_function *free_fn, MPI_Grequest_cancel_function *cancel_fn, void *extra_state, MPI_Request *request); int PMPI_Group_c2f(MPI_Group group); int PMPI_Group_compare(MPI_Group group1, MPI_Group group2, int *result); int PMPI_Group_difference(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int PMPI_Group_excl(MPI_Group group, int n, int *ranks, MPI_Group *newgroup); MPI_Group PMPI_Group_f2c(int group); int PMPI_Group_free(MPI_Group *group); int PMPI_Group_incl(MPI_Group group, int n, int *ranks, MPI_Group *newgroup); int PMPI_Group_intersection(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int PMPI_Group_range_excl(MPI_Group group, int n, int ranges[][3], MPI_Group *newgroup); int PMPI_Group_range_incl(MPI_Group group, int n, int ranges[][3], MPI_Group *newgroup); int PMPI_Group_rank(MPI_Group group, int *rank); int PMPI_Group_size(MPI_Group group, int *size); int PMPI_Group_translate_ranks(MPI_Group group1, int n, int *ranks1, MPI_Group group2, int *ranks2); int PMPI_Group_union(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); int PMPI_Ibsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Improbe(int source, int tag, MPI_Comm comm, int *flag, MPI_Message *message, MPI_Status *status); int PMPI_Imrecv(void *buf, int count, MPI_Datatype type, MPI_Message *message, MPI_Request *request); int PMPI_Info_c2f(MPI_Info info); int PMPI_Info_create(MPI_Info *info); int PMPI_Info_delete(MPI_Info info, char *key); int PMPI_Info_dup(MPI_Info info, MPI_Info *newinfo); MPI_Info PMPI_Info_f2c(int info); int PMPI_Info_free(MPI_Info *info); int PMPI_Info_get(MPI_Info info, char *key, int valuelen, char *value, int *flag); int PMPI_Info_get_nkeys(MPI_Info info, int *nkeys); int PMPI_Info_get_nthkey(MPI_Info info, int n, char *key); int PMPI_Info_get_valuelen(MPI_Info info, char *key, int *valuelen, int *flag); int PMPI_Info_set(MPI_Info info, char *key, char *value); int PMPI_Init(int *argc, char ***argv); int PMPI_Initialized(int *flag); int PMPI_Init_thread(int *argc, char ***argv, int required, int *provided); int PMPI_Intercomm_create(MPI_Comm local_comm, int local_leader, MPI_Comm bridge_comm, int remote_leader, int tag, MPI_Comm *newintercomm); int PMPI_Intercomm_merge(MPI_Comm intercomm, int high, MPI_Comm *newintercomm); int PMPI_Iprobe(int source, int tag, MPI_Comm comm, int *flag, MPI_Status *status); int PMPI_Irecv(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Irsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Isend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Issend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Is_thread_main(int *flag); int PMPI_Keyval_create(MPI_Copy_function *copy_fn, MPI_Delete_function *delete_fn, int *keyval, void *extra_state) ; int PMPI_Keyval_free(int *keyval) ; int PMPI_Lookup_name(char *service_name, MPI_Info info, char *port_name); int PMPI_Message_c2f(MPI_Message message); MPI_Message PMPI_Message_f2c(int message); int PMPI_Mprobe(int source, int tag, MPI_Comm comm, MPI_Message *message, MPI_Status *status); int PMPI_Mrecv(void *buf, int count, MPI_Datatype type, MPI_Message *message, MPI_Status *status); int PMPI_Op_c2f(MPI_Op op); int PMPI_Op_commutative(MPI_Op op, int *commute); int PMPI_Op_create(MPI_User_function *function, int commute, MPI_Op *op); int PMPI_Open_port(MPI_Info info, char *port_name); MPI_Op PMPI_Op_f2c(int op); int PMPI_Op_free(MPI_Op *op); int PMPI_Pack_external(char *datarep, void *inbuf, int incount, MPI_Datatype datatype, void *outbuf, MPI_Aint outsize, MPI_Aint *position); int PMPI_Pack_external_size(char *datarep, int incount, MPI_Datatype datatype, MPI_Aint *size); int PMPI_Pack(void *inbuf, int incount, MPI_Datatype datatype, void *outbuf, int outsize, int *position, MPI_Comm comm); int PMPI_Pack_size(int incount, MPI_Datatype datatype, MPI_Comm comm, int *size); int PMPI_Pcontrol(const int level, ...); int PMPI_Probe(int source, int tag, MPI_Comm comm, MPI_Status *status); int PMPI_Publish_name(char *service_name, MPI_Info info, char *port_name); int PMPI_Put(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Win win); int PMPI_Query_thread(int *provided); int PMPI_Recv_init(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Recv(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Status *status); int PMPI_Reduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, int root, MPI_Comm comm); int PMPI_Ireduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Reduce_local(void *inbuf, void *inoutbuf, int count, MPI_Datatype datatype, MPI_Op); int PMPI_Reduce_scatter(void *sendbuf, void *recvbuf, int *recvcounts, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int PMPI_Ireduce_scatter(void *sendbuf, void *recvbuf, int *recvcounts, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int PMPI_Reduce_scatter_block(void *sendbuf, void *recvbuf, int recvcount, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int PMPI_Ireduce_scatter_block(void *sendbuf, void *recvbuf, int recvcount, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int PMPI_Register_datarep(char *datarep, MPI_Datarep_conversion_function *read_conversion_fn, MPI_Datarep_conversion_function *write_conversion_fn, MPI_Datarep_extent_function *dtype_file_extent_fn, void *extra_state); int PMPI_Request_c2f(MPI_Request request); MPI_Request PMPI_Request_f2c(int request); int PMPI_Request_free(MPI_Request *request); int PMPI_Request_get_status(MPI_Request request, int *flag, MPI_Status *status); int PMPI_Rsend(void *ibuf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int PMPI_Rsend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Scan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); int PMPI_Iscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm, MPI_Request *request); int PMPI_Scatter(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int PMPI_Iscatter(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Scatterv(void *sendbuf, int *sendcounts, int *displs, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); int PMPI_Iscatterv(void *sendbuf, int *sendcounts, int *displs, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm, MPI_Request *request); int PMPI_Send_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Send(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int PMPI_Sendrecv(void *sendbuf, int sendcount, MPI_Datatype sendtype, int dest, int sendtag, void *recvbuf, int recvcount, MPI_Datatype recvtype, int source, int recvtag, MPI_Comm comm, MPI_Status *status); int PMPI_Sendrecv_replace(void * buf, int count, MPI_Datatype datatype, int dest, int sendtag, int source, int recvtag, MPI_Comm comm, MPI_Status *status); int PMPI_Ssend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); int PMPI_Ssend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); int PMPI_Start(MPI_Request *request); int PMPI_Startall(int count, MPI_Request *array_of_requests); int PMPI_Status_c2f(MPI_Status *c_status, int *f_status); int PMPI_Status_f2c(int *f_status, MPI_Status *c_status); int PMPI_Status_set_cancelled(MPI_Status *status, int flag); int PMPI_Status_set_elements(MPI_Status *status, MPI_Datatype datatype, int count); int PMPI_Testall(int count, MPI_Request array_of_requests[], int *flag, MPI_Status array_of_statuses[]); int PMPI_Testany(int count, MPI_Request array_of_requests[], int *index, int *flag, MPI_Status *status); int PMPI_Test(MPI_Request *request, int *flag, MPI_Status *status); int PMPI_Test_cancelled(MPI_Status *status, int *flag); int PMPI_Testsome(int incount, MPI_Request array_of_requests[], int *outcount, int array_of_indices[], MPI_Status array_of_statuses[]); int PMPI_Topo_test(MPI_Comm comm, int *status); int PMPI_Type_c2f(MPI_Datatype datatype); int PMPI_Type_commit(MPI_Datatype *type); int PMPI_Type_contiguous(int count, MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_darray(int size, int rank, int ndims, int gsize_array[], int distrib_array[], int darg_array[], int psize_array[], int order, MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_f90_complex(int p, int r, MPI_Datatype *newtype); int PMPI_Type_create_f90_integer(int r, MPI_Datatype *newtype); int PMPI_Type_create_f90_real(int p, int r, MPI_Datatype *newtype); int PMPI_Type_create_hindexed(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_hvector(int count, int blocklength, MPI_Aint stride, MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_keyval(MPI_Type_copy_attr_function *type_copy_attr_fn, MPI_Type_delete_attr_function *type_delete_attr_fn, int *type_keyval, void *extra_state); int PMPI_Type_create_indexed_block(int count, int blocklength, int array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_struct(int count, int array_of_block_lengths[], MPI_Aint array_of_displacements[], MPI_Datatype array_of_types[], MPI_Datatype *newtype); int PMPI_Type_create_subarray(int ndims, int size_array[], int subsize_array[], int start_array[], int order, MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_create_resized(MPI_Datatype oldtype, MPI_Aint lb, MPI_Aint extent, MPI_Datatype *newtype); int PMPI_Type_delete_attr(MPI_Datatype type, int type_keyval); int PMPI_Type_dup(MPI_Datatype type, MPI_Datatype *newtype); int PMPI_Type_extent(MPI_Datatype type, MPI_Aint *extent) ; int PMPI_Type_free(MPI_Datatype *type); int PMPI_Type_free_keyval(int *type_keyval); MPI_Datatype PMPI_Type_f2c(int datatype); int PMPI_Type_get_attr(MPI_Datatype type, int type_keyval, void *attribute_val, int *flag); int PMPI_Type_get_contents(MPI_Datatype mtype, int max_integers, int max_addresses, int max_datatypes, int array_of_integers[], MPI_Aint array_of_addresses[], MPI_Datatype array_of_datatypes[]); int PMPI_Type_get_envelope(MPI_Datatype type, int *num_integers, int *num_addresses, int *num_datatypes, int *combiner); int PMPI_Type_get_extent(MPI_Datatype type, MPI_Aint *lb, MPI_Aint *extent); int PMPI_Type_get_name(MPI_Datatype type, char *type_name, int *resultlen); int PMPI_Type_get_true_extent(MPI_Datatype datatype, MPI_Aint *true_lb, MPI_Aint *true_extent); int PMPI_Type_hindexed(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype) ; int PMPI_Type_hvector(int count, int blocklength, MPI_Aint stride, MPI_Datatype oldtype, MPI_Datatype *newtype) ; int PMPI_Type_indexed(int count, int array_of_blocklengths[], int array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Type_lb(MPI_Datatype type, MPI_Aint *lb) ; int PMPI_Type_match_size(int typeclass, int size, MPI_Datatype *type); int PMPI_Type_set_attr(MPI_Datatype type, int type_keyval, void *attr_val); int PMPI_Type_set_name(MPI_Datatype type, char *type_name); int PMPI_Type_size(MPI_Datatype type, int *size); int PMPI_Type_struct(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype array_of_types[], MPI_Datatype *newtype) ; int PMPI_Type_ub(MPI_Datatype mtype, MPI_Aint *ub) ; int PMPI_Type_vector(int count, int blocklength, int stride, MPI_Datatype oldtype, MPI_Datatype *newtype); int PMPI_Unpack(void *inbuf, int insize, int *position, void *outbuf, int outcount, MPI_Datatype datatype, MPI_Comm comm); int PMPI_Unpublish_name(char *service_name, MPI_Info info, char *port_name); int PMPI_Unpack_external (char *datarep, void *inbuf, MPI_Aint insize, MPI_Aint *position, void *outbuf, int outcount, MPI_Datatype datatype); int PMPI_Waitall(int count, MPI_Request *array_of_requests, MPI_Status *array_of_statuses); int PMPI_Waitany(int count, MPI_Request *array_of_requests, int *index, MPI_Status *status); int PMPI_Wait(MPI_Request *request, MPI_Status *status); int PMPI_Waitsome(int incount, MPI_Request *array_of_requests, int *outcount, int *array_of_indices, MPI_Status *array_of_statuses); int PMPI_Win_c2f(MPI_Win win); int PMPI_Win_call_errhandler(MPI_Win win, int errorcode); int PMPI_Win_complete(MPI_Win win); int PMPI_Win_create(void *base, MPI_Aint size, int disp_unit, MPI_Info info, MPI_Comm comm, MPI_Win *win); int PMPI_Win_create_errhandler(MPI_Win_errhandler_function *function, MPI_Errhandler *errhandler); int PMPI_Win_create_keyval(MPI_Win_copy_attr_function *win_copy_attr_fn, MPI_Win_delete_attr_function *win_delete_attr_fn, int *win_keyval, void *extra_state); int PMPI_Win_delete_attr(MPI_Win win, int win_keyval); MPI_Win PMPI_Win_f2c(int win); int PMPI_Win_fence(int assert, MPI_Win win); int PMPI_Win_free(MPI_Win *win); int PMPI_Win_free_keyval(int *win_keyval); int PMPI_Win_get_attr(MPI_Win win, int win_keyval, void *attribute_val, int *flag); int PMPI_Win_get_errhandler(MPI_Win win, MPI_Errhandler *errhandler); int PMPI_Win_get_group(MPI_Win win, MPI_Group *group); int PMPI_Win_get_name(MPI_Win win, char *win_name, int *resultlen); int PMPI_Win_lock(int lock_type, int rank, int assert, MPI_Win win); int PMPI_Win_post(MPI_Group group, int assert, MPI_Win win); int PMPI_Win_set_attr(MPI_Win win, int win_keyval, void *attribute_val); int PMPI_Win_set_errhandler(MPI_Win win, MPI_Errhandler errhandler); int PMPI_Win_set_name(MPI_Win win, char *win_name); int PMPI_Win_start(MPI_Group group, int assert, MPI_Win win); int PMPI_Win_test(MPI_Win win, int *flag); int PMPI_Win_unlock(int rank, MPI_Win win); int PMPI_Win_wait(MPI_Win win); double PMPI_Wtick(void); double PMPI_Wtime(void); #line 2281 "/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu/mpi.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c" int ompi_major = 1; int ompi_minor = 6; int ompi_release = 3; Defined "HAVE_OMPI_MAJOR_VERSION" to "1" Defined "HAVE_OMPI_MINOR_VERSION" to "6" Defined "HAVE_OMPI_RELEASE_VERSION" to "3" Checking for functions [MPI_Alltoallw] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Alltoallw(); static void _check_MPI_Alltoallw() { MPI_Alltoallw(); } int main() { _check_MPI_Alltoallw();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Checking for functions [MPI_Type_create_indexed_block] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Type_create_indexed_block(); static void _check_MPI_Type_create_indexed_block() { MPI_Type_create_indexed_block(); } int main() { _check_MPI_Type_create_indexed_block();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Defined "HAVE_MPI_ALLTOALLW" to "1" Checking for functions [MPI_Win_create] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Win_create(); static void _check_MPI_Win_create() { MPI_Win_create(); } int main() { _check_MPI_Win_create();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Defined "HAVE_MPI_WIN_CREATE" to "1" Defined "HAVE_MPI_REPLACE" to "1" Checking for functions [MPI_Comm_spawn MPI_Type_get_envelope MPI_Type_get_extent MPI_Type_dup MPI_Init_thread MPI_Iallreduce MPI_Ibarrier MPI_Finalized MPI_Exscan] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Comm_spawn(); static void _check_MPI_Comm_spawn() { MPI_Comm_spawn(); } char MPI_Type_get_envelope(); static void _check_MPI_Type_get_envelope() { MPI_Type_get_envelope(); } char MPI_Type_get_extent(); static void _check_MPI_Type_get_extent() { MPI_Type_get_extent(); } char MPI_Type_dup(); static void _check_MPI_Type_dup() { MPI_Type_dup(); } char MPI_Init_thread(); static void _check_MPI_Init_thread() { MPI_Init_thread(); } char MPI_Iallreduce(); static void _check_MPI_Iallreduce() { MPI_Iallreduce(); } char MPI_Ibarrier(); static void _check_MPI_Ibarrier() { MPI_Ibarrier(); } char MPI_Finalized(); static void _check_MPI_Finalized() { MPI_Finalized(); } char MPI_Exscan(); static void _check_MPI_Exscan() { MPI_Exscan(); } int main() { _check_MPI_Comm_spawn(); _check_MPI_Type_get_envelope(); _check_MPI_Type_get_extent(); _check_MPI_Type_dup(); _check_MPI_Init_thread(); _check_MPI_Iallreduce(); _check_MPI_Ibarrier(); _check_MPI_Finalized(); _check_MPI_Exscan();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Defined "HAVE_MPI_COMM_SPAWN" to "1" Defined "HAVE_MPI_TYPE_GET_ENVELOPE" to "1" Defined "HAVE_MPI_TYPE_GET_EXTENT" to "1" Defined "HAVE_MPI_TYPE_DUP" to "1" Defined "HAVE_MPI_INIT_THREAD" to "1" Defined "HAVE_MPI_IALLREDUCE" to "1" Defined "HAVE_MPI_IBARRIER" to "1" Defined "HAVE_MPI_FINALIZED" to "1" Defined "HAVE_MPI_EXSCAN" to "1" Checking for functions [MPIX_Iallreduce] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPIX_Iallreduce(); static void _check_MPIX_Iallreduce() { MPIX_Iallreduce(); } int main() { _check_MPIX_Iallreduce();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o: In function `_check_MPIX_Iallreduce': conftest.c:(.text+0x4): undefined reference to `MPIX_Iallreduce' Popping language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c", line 6: warning: variable "combiner" was declared but never referenced int combiner = MPI_COMBINER_DUP;; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { int combiner = MPI_COMBINER_DUP;; return 0; } Defined "HAVE_MPI_COMBINER_DUP" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c", line 6: warning: variable "combiner" was declared but never referenced int combiner = MPI_COMBINER_CONTIGUOUS;; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { int combiner = MPI_COMBINER_CONTIGUOUS;; return 0; } Defined "HAVE_MPI_COMBINER_CONTIGUOUS" to "1" Checking for functions [MPIDI_CH3I_sock_set] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPIDI_CH3I_sock_set(); static void _check_MPIDI_CH3I_sock_set() { MPIDI_CH3I_sock_set(); } int main() { _check_MPIDI_CH3I_sock_set();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o: In function `_check_MPIDI_CH3I_sock_set': conftest.c:(.text+0x4): undefined reference to `MPIDI_CH3I_sock_set' Popping language C Checking for functions [MPIDI_CH3I_sock_fixed_nbc_progress] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPIDI_CH3I_sock_fixed_nbc_progress(); static void _check_MPIDI_CH3I_sock_fixed_nbc_progress() { MPIDI_CH3I_sock_fixed_nbc_progress(); } int main() { _check_MPIDI_CH3I_sock_fixed_nbc_progress();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o: In function `_check_MPIDI_CH3I_sock_fixed_nbc_progress': conftest.c:(.text+0x4): undefined reference to `MPIDI_CH3I_sock_fixed_nbc_progress' Popping language C ================================================================================ TEST checkSharedLibrary from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:130) TESTING: checkSharedLibrary from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:130) Sets flag indicating if MPI libraries are shared or not and determines if MPI libraries CANNOT be used by shared libraries ================================================================================ TEST configureMPIEXEC from config.packages.MPI(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/MPI.py:143) TESTING: configureMPIEXEC from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:143) Checking for mpiexec Checking for program /opt/FJSVtclang/check/mpiexec...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/mpiexec...found Defined make macro "MPIEXEC" to "mpiexec" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #ifdef __cplusplus extern "C" #endif int init(int argc, char *argv[]) { int isInitialized; MPI_Init(&argc, &argv); MPI_Initialized(&isInitialized); return (int) isInitialized; } Pushing language C Popping language C Executing: /usr/bin/ar cr /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/libconftest.a /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o ; /usr/bin/ranlib /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/libconftest.a Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #ifdef __cplusplus extern "C" #endif int checkInit(void) { int isInitialized; MPI_Initialized(&isInitialized); if (isInitialized) MPI_Finalize(); return (int) isInitialized; } Pushing language C Popping language C Executing: /usr/bin/ar cr /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/libconftest.a /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/conftest.o ; /usr/bin/ranlib /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI/libconftest.a Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #ifdef PETSC_HAVE_DLFCN_H #include #endif int main() { int argc = 1; char *argv[2] = {(char *) "conftest", NULL}; void *lib; int (*init)(int, char **); int (*checkInit)(void); lib = dlopen("/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/lib1.a", RTLD_LAZY); if (!lib) { fprintf(stderr, "Could not open lib1.so: %s\n", dlerror()); exit(1); } init = (int (*)(int, char **)) dlsym(lib, "init"); if (!init) { fprintf(stderr, "Could not find initialization function\n"); exit(1); } if (!(*init)(argc, argv)) { fprintf(stderr, "Could not initialize library\n"); exit(1); } lib = dlopen("/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/lib2.a", RTLD_LAZY); if (!lib) { fprintf(stderr, "Could not open lib2.so: %s\n", dlerror()); exit(1); } checkInit = (int (*)(void)) dlsym(lib, "checkInit"); if (!checkInit) { fprintf(stderr, "Could not find initialization check function\n"); exit(1); } if (!(*checkInit)()) { fprintf(stderr, "Did not link with shared library\n"); exit(2); } ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest to see if it can be run Executing: mpiexec /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest Executing: mpiexec /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest ERROR while running executable: Could not execute "mpiexec /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest": [ERR.] PLE 0015 plexec cannot execute as sequential job. Library was not shared Popping language C ================================================================================ TEST alternateConfigureLibrary from config.packages.tetgen(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.tetgen(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.yaml(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.yaml(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.ctetgen(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.ctetgen(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.sprng(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.sprng(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default Pushing language C ================================================================================ TEST configureLibrary from config.packages.ssl(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/ssl.py:23) TESTING: configureLibrary from config.packages.ssl(config/BuildSystem/config/packages/ssl.py:23) ================================================================================== Checking for a functional ssl Checking for library in Compiler specific search SSL: [] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [SSLv23_method] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char SSLv23_method(); static void _check_SSLv23_method() { SSLv23_method(); } int main() { _check_SSLv23_method();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o: In function `_check_SSLv23_method': conftest.c:(.text+0x4): undefined reference to `SSLv23_method' Popping language C Checking for library in Compiler specific search SSL: ['libssl.a', 'libcrypto.a'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [SSLv23_method] in library ['libssl.a', 'libcrypto.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char SSLv23_method(); static void _check_SSLv23_method() { SSLv23_method(); } int main() { _check_SSLv23_method();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -lssl -lcrypto -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_LIBSSL" to "1" Defined "HAVE_LIBCRYPTO" to "1" Popping language C Checking for headers Compiler specific search SSL: [] Pushing language C ================================================================================ TEST checkInclude from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['openssl/ssl.h'] in [] Checking include with compiler flags var CPPFLAGS [] Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 128 "/usr/include/openssl/e_os2.h" #line 137 "/usr/include/openssl/e_os2.h" #line 151 "/usr/include/openssl/e_os2.h" #line 165 "/usr/include/openssl/e_os2.h" #line 206 "/usr/include/openssl/e_os2.h" #line 229 "/usr/include/openssl/e_os2.h" #line 264 "/usr/include/openssl/e_os2.h" #line 288 "/usr/include/openssl/e_os2.h" #line 174 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/comp.h" #line 1 "/usr/include/openssl/crypto.h" #line 1 "/usr/include/stdlib.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/stdlib.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef int wchar_t; #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 34 "/usr/include/stdlib.h" #line 95 "/usr/include/stdlib.h" typedef struct { int quot; int rem; } div_t; typedef struct { long int quot; long int rem; } ldiv_t; typedef struct { long long int quot; long long int rem; } lldiv_t; extern size_t __ctype_get_mb_cur_max (void) ; extern double atof (const char *__nptr) ; extern int atoi (const char *__nptr) ; extern long int atol (const char *__nptr) ; extern long long int atoll (const char *__nptr) ; extern double strtod (const char * __nptr, char ** __endptr) ; extern float strtof (const char * __nptr, char ** __endptr) ; extern long double strtold (const char * __nptr, char ** __endptr) ; extern long int strtol (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long int strtoul (const char * __nptr, char ** __endptr, int __base) ; extern long long int strtoq (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long long int strtouq (const char * __nptr, char ** __endptr, int __base) ; extern long long int strtoll (const char * __nptr, char ** __endptr, int __base) ; extern unsigned long long int strtoull (const char * __nptr, char ** __endptr, int __base) ; #line 274 "/usr/include/stdlib.h" #line 305 "/usr/include/stdlib.h" extern char *l64a (long int __n) ; extern long int a64l (const char *__s) ; #line 1 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 32 "/usr/include/sys/types.h" typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; #line 60 "/usr/include/sys/types.h" typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; #line 98 "/usr/include/sys/types.h" typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" #line 419 "/usr/include/time.h" #line 134 "/usr/include/sys/types.h" #line 145 "/usr/include/sys/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 148 "/usr/include/sys/types.h" typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; typedef char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char u_int8_t; typedef unsigned short int u_int16_t; typedef unsigned int u_int32_t; typedef unsigned long int u_int64_t; typedef int register_t; #line 213 "/usr/include/sys/types.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 218 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/select.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 26 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/select.h" #line 32 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 35 "/usr/include/sys/select.h" typedef __sigset_t sigset_t; #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 45 "/usr/include/sys/select.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; #line 47 "/usr/include/sys/select.h" typedef __suseconds_t suseconds_t; typedef long int __fd_mask; typedef struct { __fd_mask __fds_bits[1024 / (8 * sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; extern int select (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, struct timeval * __timeout); extern int pselect (int __nfds, fd_set * __readfds, fd_set * __writefds, fd_set * __exceptfds, const struct timespec * __timeout, const __sigset_t * __sigmask); #line 221 "/usr/include/sys/types.h" #line 1 "/usr/include/sys/sysmacros.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 25 "/usr/include/sys/sysmacros.h" extern unsigned int gnu_dev_major (unsigned long long int __dev) ; extern unsigned int gnu_dev_minor (unsigned long long int __dev) ; extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) ; #line 62 "/usr/include/sys/sysmacros.h" #line 224 "/usr/include/sys/types.h" typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; #line 260 "/usr/include/sys/types.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 271 "/usr/include/sys/types.h" #line 321 "/usr/include/stdlib.h" extern long int random (void) ; extern void srandom (unsigned int __seed) ; extern char *initstate (unsigned int __seed, char *__statebuf, size_t __statelen) ; extern char *setstate (char *__statebuf) ; struct random_data { int32_t *fptr; int32_t *rptr; int32_t *state; int rand_type; int rand_deg; int rand_sep; int32_t *end_ptr; }; extern int random_r (struct random_data * __buf, int32_t * __result) ; extern int srandom_r (unsigned int __seed, struct random_data *__buf) ; extern int initstate_r (unsigned int __seed, char * __statebuf, size_t __statelen, struct random_data * __buf) ; extern int setstate_r (char * __statebuf, struct random_data * __buf) ; extern int rand (void) ; extern void srand (unsigned int __seed) ; extern int rand_r (unsigned int *__seed) ; extern double drand48 (void) ; extern double erand48 (unsigned short int __xsubi[3]) ; extern long int lrand48 (void) ; extern long int nrand48 (unsigned short int __xsubi[3]) ; extern long int mrand48 (void) ; extern long int jrand48 (unsigned short int __xsubi[3]) ; extern void srand48 (long int __seedval) ; extern unsigned short int *seed48 (unsigned short int __seed16v[3]) ; extern void lcong48 (unsigned short int __param[7]) ; struct drand48_data { unsigned short int __x[3]; unsigned short int __old_x[3]; unsigned short int __c; unsigned short int __init; unsigned long long int __a; }; extern int drand48_r (struct drand48_data * __buffer, double * __result) ; extern int erand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, double * __result) ; extern int lrand48_r (struct drand48_data * __buffer, long int * __result) ; extern int nrand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, long int * __result) ; extern int mrand48_r (struct drand48_data * __buffer, long int * __result) ; extern int jrand48_r (unsigned short int __xsubi[3], struct drand48_data * __buffer, long int * __result) ; extern int srand48_r (long int __seedval, struct drand48_data *__buffer) ; extern int seed48_r (unsigned short int __seed16v[3], struct drand48_data *__buffer) ; extern int lcong48_r (unsigned short int __param[7], struct drand48_data *__buffer) ; extern void *malloc (size_t __size) ; extern void *calloc (size_t __nmemb, size_t __size) ; extern void *realloc (void *__ptr, size_t __size) ; extern void free (void *__ptr) ; extern void cfree (void *__ptr) ; #line 1 "/usr/include/alloca.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/alloca.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 26 "/usr/include/alloca.h" extern void *alloca (size_t __size) ; #line 498 "/usr/include/stdlib.h" extern void *valloc (size_t __size) ; extern int posix_memalign (void **__memptr, size_t __alignment, size_t __size) ; extern void abort (void) ; extern int atexit (void (*__func) (void)) ; extern int on_exit (void (*__func) (int __status, void *__arg), void *__arg) ; extern void exit (int __status) ; extern void _Exit (int __status) ; extern char *getenv (const char *__name) ; extern char *__secure_getenv (const char *__name) ; extern int putenv (char *__string) ; extern int setenv (const char *__name, const char *__value, int __replace) ; extern int unsetenv (const char *__name) ; extern int clearenv (void) ; extern char *mktemp (char *__template) ; extern int mkstemp (char *__template) ; #line 607 "/usr/include/stdlib.h" extern char *mkdtemp (char *__template) ; #line 638 "/usr/include/stdlib.h" extern int system (const char *__command) ; #line 655 "/usr/include/stdlib.h" extern char *realpath (const char * __name, char * __resolved) ; typedef int (*__compar_fn_t) (const void *, const void *); extern void *bsearch (const void *__key, const void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; extern void qsort (void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) ; extern int abs (int __x) ; extern long int labs (long int __x) ; extern long long int llabs (long long int __x) ; extern div_t div (int __numer, int __denom) ; extern ldiv_t ldiv (long int __numer, long int __denom) ; extern lldiv_t lldiv (long long int __numer, long long int __denom) ; extern char *ecvt (double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *fcvt (double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *gcvt (double __value, int __ndigit, char *__buf) ; extern char *qecvt (long double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *qfcvt (long double __value, int __ndigit, int * __decpt, int * __sign) ; extern char *qgcvt (long double __value, int __ndigit, char *__buf) ; extern int ecvt_r (double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int fcvt_r (double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int qecvt_r (long double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int qfcvt_r (long double __value, int __ndigit, int * __decpt, int * __sign, char * __buf, size_t __len) ; extern int mblen (const char *__s, size_t __n) ; extern int mbtowc (wchar_t * __pwc, const char * __s, size_t __n) ; extern int wctomb (char *__s, wchar_t __wchar) ; extern size_t mbstowcs (wchar_t * __pwcs, const char * __s, size_t __n) ; extern size_t wcstombs (char * __s, const wchar_t * __pwcs, size_t __n) ; extern int rpmatch (const char *__response) ; #line 820 "/usr/include/stdlib.h" extern int posix_openpt (int __oflag) ; #line 851 "/usr/include/stdlib.h" #line 862 "/usr/include/stdlib.h" extern int getloadavg (double __loadavg[], int __nelem) ; #line 879 "/usr/include/stdlib.h" #line 121 "/usr/include/openssl/crypto.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 123 "/usr/include/openssl/crypto.h" #line 1 "/usr/include/stdio.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 29 "/usr/include/stdio.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 35 "/usr/include/stdio.h" struct _IO_FILE; typedef struct _IO_FILE FILE; typedef struct _IO_FILE __FILE; #line 1 "/usr/include/libio.h" #line 1 "/usr/include/_G_config.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 16 "/usr/include/_G_config.h" #line 1 "/usr/include/wchar.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned int wint_t; #line 53 "/usr/include/wchar.h" #line 64 "/usr/include/wchar.h" #line 74 "/usr/include/wchar.h" typedef struct { int __count; union { wint_t __wch; char __wchb[4]; } __value; } __mbstate_t; #line 841 "/usr/include/wchar.h" #line 21 "/usr/include/_G_config.h" typedef struct { __off_t __pos; __mbstate_t __state; } _G_fpos_t; typedef struct { __off64_t __pos; __mbstate_t __state; } _G_fpos64_t; #line 52 "/usr/include/_G_config.h" typedef int _G_int16_t ; typedef int _G_int32_t ; typedef unsigned int _G_uint16_t ; typedef unsigned int _G_uint32_t ; #line 74 "/usr/include/_G_config.h" #line 33 "/usr/include/libio.h" #line 49 "/usr/include/libio.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stdarg.h" typedef void *va_list; #line 27 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stdarg.h" #line 38 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stdarg.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stdarg.h" #line 54 "/usr/include/libio.h" #line 73 "/usr/include/libio.h" #line 88 "/usr/include/libio.h" #line 104 "/usr/include/libio.h" #line 113 "/usr/include/libio.h" #line 139 "/usr/include/libio.h" #line 149 "/usr/include/libio.h" #line 168 "/usr/include/libio.h" struct _IO_jump_t; struct _IO_FILE; #line 180 "/usr/include/libio.h" typedef void _IO_lock_t; struct _IO_marker { struct _IO_marker *_next; struct _IO_FILE *_sbuf; int _pos; #line 203 "/usr/include/libio.h" }; enum __codecvt_result { __codecvt_ok, __codecvt_partial, __codecvt_error, __codecvt_noconv }; #line 270 "/usr/include/libio.h" struct _IO_FILE { int _flags; char* _IO_read_ptr; char* _IO_read_end; char* _IO_read_base; char* _IO_write_base; char* _IO_write_ptr; char* _IO_write_end; char* _IO_buf_base; char* _IO_buf_end; char *_IO_save_base; char *_IO_backup_base; char *_IO_save_end; struct _IO_marker *_markers; struct _IO_FILE *_chain; int _fileno; int _flags2; __off_t _old_offset; unsigned short _cur_column; signed char _vtable_offset; char _shortbuf[1]; _IO_lock_t *_lock; #line 319 "/usr/include/libio.h" __off64_t _offset; #line 328 "/usr/include/libio.h" void *__pad1; void *__pad2; void *__pad3; void *__pad4; size_t __pad5; int _mode; char _unused2[15 * sizeof (int) - 4 * sizeof (void *) - sizeof (size_t)]; }; typedef struct _IO_FILE _IO_FILE; struct _IO_FILE_plus; extern struct _IO_FILE_plus _IO_2_1_stdin_; extern struct _IO_FILE_plus _IO_2_1_stdout_; extern struct _IO_FILE_plus _IO_2_1_stderr_; #line 358 "/usr/include/libio.h" typedef __ssize_t __io_read_fn (void *__cookie, char *__buf, size_t __nbytes); typedef __ssize_t __io_write_fn (void *__cookie, const char *__buf, size_t __n); typedef int __io_seek_fn (void *__cookie, __off64_t *__pos, int __w); typedef int __io_close_fn (void *__cookie); #line 410 "/usr/include/libio.h" extern int __underflow (_IO_FILE *); extern int __uflow (_IO_FILE *); extern int __overflow (_IO_FILE *, int); #line 442 "/usr/include/libio.h" #line 454 "/usr/include/libio.h" extern int _IO_getc (_IO_FILE *__fp); extern int _IO_putc (int __c, _IO_FILE *__fp); extern int _IO_feof (_IO_FILE *__fp) ; extern int _IO_ferror (_IO_FILE *__fp) ; extern int _IO_peekc_locked (_IO_FILE *__fp); extern void _IO_flockfile (_IO_FILE *) ; extern void _IO_funlockfile (_IO_FILE *) ; extern int _IO_ftrylockfile (_IO_FILE *) ; #line 487 "/usr/include/libio.h" extern int _IO_vfscanf (_IO_FILE * , const char * , va_list, int *); extern int _IO_vfprintf (_IO_FILE *, const char *, va_list); extern __ssize_t _IO_padn (_IO_FILE *, int, __ssize_t); extern size_t _IO_sgetn (_IO_FILE *, void *, size_t); extern __off64_t _IO_seekoff (_IO_FILE *, __off64_t, int, int); extern __off64_t _IO_seekpos (_IO_FILE *, __off64_t, int); extern void _IO_free_backup_area (_IO_FILE *) ; #line 544 "/usr/include/libio.h" #line 76 "/usr/include/stdio.h" #line 87 "/usr/include/stdio.h" typedef _G_fpos_t fpos_t; #line 1 "/usr/include/bits/stdio_lim.h" #line 142 "/usr/include/stdio.h" extern struct _IO_FILE *stdin; extern struct _IO_FILE *stdout; extern struct _IO_FILE *stderr; extern int remove (const char *__filename) ; extern int rename (const char *__old, const char *__new) ; extern FILE *tmpfile (void) ; #line 182 "/usr/include/stdio.h" extern char *tmpnam (char *__s) ; extern char *tmpnam_r (char *__s) ; extern char *tempnam (const char *__dir, const char *__pfx) ; extern int fclose (FILE *__stream); extern int fflush (FILE *__stream); extern int fflush_unlocked (FILE *__stream); #line 243 "/usr/include/stdio.h" extern FILE *fopen (const char * __filename, const char * __modes) ; extern FILE *freopen (const char * __filename, const char * __modes, FILE * __stream) ; #line 274 "/usr/include/stdio.h" #line 282 "/usr/include/stdio.h" extern FILE *fdopen (int __fd, const char *__modes) ; #line 304 "/usr/include/stdio.h" extern void setbuf (FILE * __stream, char * __buf) ; extern int setvbuf (FILE * __stream, char * __buf, int __modes, size_t __n) ; extern void setbuffer (FILE * __stream, char * __buf, size_t __size) ; extern void setlinebuf (FILE *__stream) ; extern int fprintf (FILE * __stream, const char * __format, ...); extern int printf (const char * __format, ...); extern int sprintf (char * __s, const char * __format, ...) ; extern int vfprintf (FILE * __s, const char * __format, va_list __arg); extern int vprintf (const char * __format, va_list __arg); extern int vsprintf (char * __s, const char * __format, va_list __arg) ; extern int snprintf (char * __s, size_t __maxlen, const char * __format, ...) ; extern int vsnprintf (char * __s, size_t __maxlen, const char * __format, va_list __arg) ; #line 398 "/usr/include/stdio.h" extern int fscanf (FILE * __stream, const char * __format, ...) ; extern int scanf (const char * __format, ...) ; extern int sscanf (const char * __s, const char * __format, ...) ; #line 432 "/usr/include/stdio.h" extern int __isoc99_fscanf (FILE * __stream, const char * __format, ...) ; extern int __isoc99_scanf (const char * __format, ...) ; extern int __isoc99_sscanf (const char * __s, const char * __format, ...) ; extern int vfscanf (FILE * __s, const char * __format, va_list __arg) ; extern int vscanf (const char * __format, va_list __arg) ; extern int vsscanf (const char * __s, const char * __format, va_list __arg) ; #line 488 "/usr/include/stdio.h" extern int __isoc99_vfscanf (FILE * __s, const char * __format, va_list __arg) ; extern int __isoc99_vscanf (const char * __format, va_list __arg) ; extern int __isoc99_vsscanf (const char * __s, const char * __format, va_list __arg) ; extern int fgetc (FILE *__stream); extern int getc (FILE *__stream); extern int getchar (void); extern int getc_unlocked (FILE *__stream); extern int getchar_unlocked (void); extern int fgetc_unlocked (FILE *__stream); extern int fputc (int __c, FILE *__stream); extern int putc (int __c, FILE *__stream); extern int putchar (int __c); extern int fputc_unlocked (int __c, FILE *__stream); extern int putc_unlocked (int __c, FILE *__stream); extern int putchar_unlocked (int __c); extern int getw (FILE *__stream); extern int putw (int __w, FILE *__stream); extern char *fgets (char * __s, int __n, FILE * __stream) ; extern char *gets (char *__s) ; #line 623 "/usr/include/stdio.h" #line 653 "/usr/include/stdio.h" extern int fputs (const char * __s, FILE * __stream); extern int puts (const char *__s); extern int ungetc (int __c, FILE *__stream); extern size_t fread (void * __ptr, size_t __size, size_t __n, FILE * __stream) ; extern size_t fwrite (const void * __ptr, size_t __size, size_t __n, FILE * __s) ; #line 700 "/usr/include/stdio.h" extern size_t fread_unlocked (void * __ptr, size_t __size, size_t __n, FILE * __stream) ; extern size_t fwrite_unlocked (const void * __ptr, size_t __size, size_t __n, FILE * __stream) ; extern int fseek (FILE *__stream, long int __off, int __whence); extern long int ftell (FILE *__stream) ; extern void rewind (FILE *__stream); extern int fseeko (FILE *__stream, __off_t __off, int __whence); extern __off_t ftello (FILE *__stream) ; #line 762 "/usr/include/stdio.h" extern int fgetpos (FILE * __stream, fpos_t * __pos); extern int fsetpos (FILE *__stream, const fpos_t *__pos); #line 786 "/usr/include/stdio.h" #line 794 "/usr/include/stdio.h" extern void clearerr (FILE *__stream) ; extern int feof (FILE *__stream) ; extern int ferror (FILE *__stream) ; extern void clearerr_unlocked (FILE *__stream) ; extern int feof_unlocked (FILE *__stream) ; extern int ferror_unlocked (FILE *__stream) ; extern void perror (const char *__s); #line 1 "/usr/include/bits/sys_errlist.h" extern int sys_nerr; extern const char *const sys_errlist[]; #line 825 "/usr/include/stdio.h" extern int fileno (FILE *__stream) ; extern int fileno_unlocked (FILE *__stream) ; extern FILE *popen (const char *__command, const char *__modes) ; extern int pclose (FILE *__stream); extern char *ctermid (char *__s) ; #line 878 "/usr/include/stdio.h" extern void flockfile (FILE *__stream) ; extern int ftrylockfile (FILE *__stream) ; extern void funlockfile (FILE *__stream) ; #line 901 "/usr/include/stdio.h" #line 913 "/usr/include/stdio.h" #line 126 "/usr/include/openssl/crypto.h" #line 1 "/usr/include/openssl/stack.h" typedef struct stack_st { int num; char **data; int sorted; int num_alloc; int (*comp) (const char *const *, const char *const *); } STACK; int sk_num(const STACK *); char *sk_value(const STACK *, int); char *sk_set(STACK *, int, char *); STACK *sk_new(int (*cmp) (const char *const *, const char *const *)); STACK *sk_new_null(void); void sk_free(STACK *); void sk_pop_free(STACK * st, void (*func) (void *)); int sk_insert(STACK * sk, char *data, int where); char *sk_delete(STACK * st, int loc); char *sk_delete_ptr(STACK * st, char *p); int sk_find(STACK * st, char *data); int sk_find_ex(STACK * st, char *data); int sk_push(STACK * st, char *data); int sk_unshift(STACK * st, char *data); char *sk_shift(STACK * st); char *sk_pop(STACK * st); void sk_zero(STACK * st); int (*sk_set_cmp_func(STACK * sk, int (*c) (const char *const *, const char *const *))) (const char *const *, const char *const *); STACK *sk_dup(STACK * st); void sk_sort(STACK * st); int sk_is_sorted(const STACK * st); #line 129 "/usr/include/openssl/crypto.h" #line 1 "/usr/include/openssl/safestack.h" #line 158 "/usr/include/openssl/safestack.h" #line 207 "/usr/include/openssl/safestack.h" #line 247 "/usr/include/openssl/safestack.h" #line 269 "/usr/include/openssl/safestack.h" #line 291 "/usr/include/openssl/safestack.h" #line 313 "/usr/include/openssl/safestack.h" #line 335 "/usr/include/openssl/safestack.h" #line 357 "/usr/include/openssl/safestack.h" #line 379 "/usr/include/openssl/safestack.h" #line 401 "/usr/include/openssl/safestack.h" #line 423 "/usr/include/openssl/safestack.h" #line 445 "/usr/include/openssl/safestack.h" #line 467 "/usr/include/openssl/safestack.h" #line 489 "/usr/include/openssl/safestack.h" #line 511 "/usr/include/openssl/safestack.h" #line 533 "/usr/include/openssl/safestack.h" #line 555 "/usr/include/openssl/safestack.h" #line 577 "/usr/include/openssl/safestack.h" #line 599 "/usr/include/openssl/safestack.h" #line 621 "/usr/include/openssl/safestack.h" #line 643 "/usr/include/openssl/safestack.h" #line 665 "/usr/include/openssl/safestack.h" #line 687 "/usr/include/openssl/safestack.h" #line 709 "/usr/include/openssl/safestack.h" #line 731 "/usr/include/openssl/safestack.h" #line 753 "/usr/include/openssl/safestack.h" #line 775 "/usr/include/openssl/safestack.h" #line 797 "/usr/include/openssl/safestack.h" #line 819 "/usr/include/openssl/safestack.h" #line 841 "/usr/include/openssl/safestack.h" #line 863 "/usr/include/openssl/safestack.h" #line 885 "/usr/include/openssl/safestack.h" #line 907 "/usr/include/openssl/safestack.h" #line 929 "/usr/include/openssl/safestack.h" #line 951 "/usr/include/openssl/safestack.h" #line 973 "/usr/include/openssl/safestack.h" #line 995 "/usr/include/openssl/safestack.h" #line 1017 "/usr/include/openssl/safestack.h" #line 1039 "/usr/include/openssl/safestack.h" #line 1061 "/usr/include/openssl/safestack.h" #line 1083 "/usr/include/openssl/safestack.h" #line 1105 "/usr/include/openssl/safestack.h" #line 1127 "/usr/include/openssl/safestack.h" #line 1149 "/usr/include/openssl/safestack.h" #line 1171 "/usr/include/openssl/safestack.h" #line 1193 "/usr/include/openssl/safestack.h" #line 1215 "/usr/include/openssl/safestack.h" #line 1237 "/usr/include/openssl/safestack.h" #line 1259 "/usr/include/openssl/safestack.h" #line 1281 "/usr/include/openssl/safestack.h" #line 1303 "/usr/include/openssl/safestack.h" #line 1325 "/usr/include/openssl/safestack.h" #line 1347 "/usr/include/openssl/safestack.h" #line 1369 "/usr/include/openssl/safestack.h" #line 1391 "/usr/include/openssl/safestack.h" #line 1413 "/usr/include/openssl/safestack.h" #line 1435 "/usr/include/openssl/safestack.h" #line 1457 "/usr/include/openssl/safestack.h" #line 1479 "/usr/include/openssl/safestack.h" #line 1501 "/usr/include/openssl/safestack.h" #line 1523 "/usr/include/openssl/safestack.h" #line 1545 "/usr/include/openssl/safestack.h" #line 1567 "/usr/include/openssl/safestack.h" #line 1589 "/usr/include/openssl/safestack.h" #line 1611 "/usr/include/openssl/safestack.h" #line 1633 "/usr/include/openssl/safestack.h" #line 1655 "/usr/include/openssl/safestack.h" #line 1677 "/usr/include/openssl/safestack.h" #line 1699 "/usr/include/openssl/safestack.h" #line 1721 "/usr/include/openssl/safestack.h" #line 1743 "/usr/include/openssl/safestack.h" #line 1765 "/usr/include/openssl/safestack.h" #line 1787 "/usr/include/openssl/safestack.h" #line 1796 "/usr/include/openssl/safestack.h" #line 1805 "/usr/include/openssl/safestack.h" #line 1814 "/usr/include/openssl/safestack.h" #line 1823 "/usr/include/openssl/safestack.h" #line 1832 "/usr/include/openssl/safestack.h" #line 1841 "/usr/include/openssl/safestack.h" #line 1850 "/usr/include/openssl/safestack.h" #line 1859 "/usr/include/openssl/safestack.h" #line 1868 "/usr/include/openssl/safestack.h" #line 1877 "/usr/include/openssl/safestack.h" #line 1886 "/usr/include/openssl/safestack.h" #line 1895 "/usr/include/openssl/safestack.h" #line 1904 "/usr/include/openssl/safestack.h" #line 1913 "/usr/include/openssl/safestack.h" #line 1922 "/usr/include/openssl/safestack.h" #line 1931 "/usr/include/openssl/safestack.h" #line 1940 "/usr/include/openssl/safestack.h" #line 1949 "/usr/include/openssl/safestack.h" #line 1958 "/usr/include/openssl/safestack.h" #line 1967 "/usr/include/openssl/safestack.h" #line 1976 "/usr/include/openssl/safestack.h" #line 1985 "/usr/include/openssl/safestack.h" #line 130 "/usr/include/openssl/crypto.h" #line 1 "/usr/include/openssl/opensslv.h" #line 36 "/usr/include/openssl/opensslv.h" #line 131 "/usr/include/openssl/crypto.h" #line 1 "/usr/include/openssl/ossl_typ.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 59 "/usr/include/openssl/ossl_typ.h" #line 79 "/usr/include/openssl/ossl_typ.h" typedef struct asn1_string_st ASN1_INTEGER; typedef struct asn1_string_st ASN1_ENUMERATED; typedef struct asn1_string_st ASN1_BIT_STRING; typedef struct asn1_string_st ASN1_OCTET_STRING; typedef struct asn1_string_st ASN1_PRINTABLESTRING; typedef struct asn1_string_st ASN1_T61STRING; typedef struct asn1_string_st ASN1_IA5STRING; typedef struct asn1_string_st ASN1_GENERALSTRING; typedef struct asn1_string_st ASN1_UNIVERSALSTRING; typedef struct asn1_string_st ASN1_BMPSTRING; typedef struct asn1_string_st ASN1_UTCTIME; typedef struct asn1_string_st ASN1_TIME; typedef struct asn1_string_st ASN1_GENERALIZEDTIME; typedef struct asn1_string_st ASN1_VISIBLESTRING; typedef struct asn1_string_st ASN1_UTF8STRING; typedef int ASN1_BOOLEAN; typedef int ASN1_NULL; #line 106 "/usr/include/openssl/ossl_typ.h" typedef struct bignum_st BIGNUM; typedef struct bignum_ctx BN_CTX; typedef struct bn_blinding_st BN_BLINDING; typedef struct bn_mont_ctx_st BN_MONT_CTX; typedef struct bn_recp_ctx_st BN_RECP_CTX; typedef struct bn_gencb_st BN_GENCB; typedef struct buf_mem_st BUF_MEM; typedef struct evp_cipher_st EVP_CIPHER; typedef struct evp_cipher_ctx_st EVP_CIPHER_CTX; typedef struct env_md_st EVP_MD; typedef struct env_md_ctx_st EVP_MD_CTX; typedef struct evp_pkey_st EVP_PKEY; typedef struct dh_st DH; typedef struct dh_method DH_METHOD; typedef struct dsa_st DSA; typedef struct dsa_method DSA_METHOD; typedef struct rsa_st RSA; typedef struct rsa_meth_st RSA_METHOD; typedef struct rand_meth_st RAND_METHOD; typedef struct ecdh_method ECDH_METHOD; typedef struct ecdsa_method ECDSA_METHOD; typedef struct x509_st X509; typedef struct X509_algor_st X509_ALGOR; typedef struct X509_crl_st X509_CRL; typedef struct X509_name_st X509_NAME; typedef struct x509_store_st X509_STORE; typedef struct x509_store_ctx_st X509_STORE_CTX; typedef struct ssl_st SSL; typedef struct ssl_ctx_st SSL_CTX; typedef struct v3_ext_ctx X509V3_CTX; typedef struct conf_st CONF; typedef struct store_st STORE; typedef struct store_method_st STORE_METHOD; typedef struct ui_st UI; typedef struct ui_method_st UI_METHOD; typedef struct st_ERR_FNS ERR_FNS; typedef struct engine_st ENGINE; typedef struct X509_POLICY_NODE_st X509_POLICY_NODE; typedef struct X509_POLICY_LEVEL_st X509_POLICY_LEVEL; typedef struct X509_POLICY_TREE_st X509_POLICY_TREE; typedef struct X509_POLICY_CACHE_st X509_POLICY_CACHE; typedef struct crypto_ex_data_st CRYPTO_EX_DATA; typedef int CRYPTO_EX_new (void *parent, void *ptr, CRYPTO_EX_DATA *ad, int idx, long argl, void *argp); typedef void CRYPTO_EX_free (void *parent, void *ptr, CRYPTO_EX_DATA *ad, int idx, long argl, void *argp); typedef int CRYPTO_EX_dup (CRYPTO_EX_DATA *to, CRYPTO_EX_DATA *from, void *from_d, int idx, long argl, void *argp); typedef struct ocsp_req_ctx_st OCSP_REQ_CTX; typedef struct ocsp_response_st OCSP_RESPONSE; typedef struct ocsp_responder_id_st OCSP_RESPID; #line 132 "/usr/include/openssl/crypto.h" #line 1 "/usr/include/openssl/symhacks.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 59 "/usr/include/openssl/symhacks.h" #line 401 "/usr/include/openssl/symhacks.h" #line 434 "/usr/include/openssl/symhacks.h" #line 142 "/usr/include/openssl/crypto.h" #line 173 "/usr/include/openssl/crypto.h" typedef struct openssl_item_st { int code; void *value; size_t value_size; size_t *value_length; } OPENSSL_ITEM; #line 233 "/usr/include/openssl/crypto.h" #line 259 "/usr/include/openssl/crypto.h" typedef struct { int references; struct CRYPTO_dynlock_value *data; } CRYPTO_dynlock; typedef struct bio_st BIO_dummy; struct crypto_ex_data_st { STACK *sk; int dummy; }; typedef struct crypto_ex_data_func_st { long argl; void *argp; CRYPTO_EX_new *new_func; CRYPTO_EX_free *free_func; CRYPTO_EX_dup *dup_func; } CRYPTO_EX_DATA_FUNCS; #line 338 "/usr/include/openssl/crypto.h" void CRYPTO_malloc_debug_init(void); int CRYPTO_mem_ctrl(int mode); int CRYPTO_is_mem_check_on(void); #line 387 "/usr/include/openssl/crypto.h" const char *SSLeay_version(int type); unsigned long SSLeay(void); int OPENSSL_issetugid(void); typedef struct st_CRYPTO_EX_DATA_IMPL CRYPTO_EX_DATA_IMPL; const CRYPTO_EX_DATA_IMPL *CRYPTO_get_ex_data_implementation(void); int CRYPTO_set_ex_data_implementation(const CRYPTO_EX_DATA_IMPL *i); int CRYPTO_ex_data_new_class(void); int CRYPTO_get_ex_new_index(int class_index, long argl, void *argp, CRYPTO_EX_new *new_func, CRYPTO_EX_dup *dup_func, CRYPTO_EX_free *free_func); int CRYPTO_new_ex_data(int class_index, void *obj, CRYPTO_EX_DATA *ad); int CRYPTO_dup_ex_data(int class_index, CRYPTO_EX_DATA *to, CRYPTO_EX_DATA *from); void CRYPTO_free_ex_data(int class_index, void *obj, CRYPTO_EX_DATA *ad); int CRYPTO_set_ex_data(CRYPTO_EX_DATA *ad, int idx, void *val); void *CRYPTO_get_ex_data(const CRYPTO_EX_DATA *ad, int idx); void CRYPTO_cleanup_all_ex_data(void); int CRYPTO_get_new_lockid(char *name); int CRYPTO_num_locks(void); void CRYPTO_lock(int mode, int type, const char *file, int line); void CRYPTO_set_locking_callback(void (*func) (int mode, int type, const char *file, int line)); void (*CRYPTO_get_locking_callback(void)) (int mode, int type, const char *file, int line); void CRYPTO_set_add_lock_callback(int (*func) (int *num, int mount, int type, const char *file, int line)); int (*CRYPTO_get_add_lock_callback(void)) (int *num, int mount, int type, const char *file, int line); void CRYPTO_set_id_callback(unsigned long (*func) (void)); unsigned long (*CRYPTO_get_id_callback(void)) (void); unsigned long CRYPTO_thread_id(void); const char *CRYPTO_get_lock_name(int type); int CRYPTO_add_lock(int *pointer, int amount, int type, const char *file, int line); void int_CRYPTO_set_do_dynlock_callback(void (*do_dynlock_cb) (int mode, int type, const char *file, int line)); int CRYPTO_get_new_dynlockid(void); void CRYPTO_destroy_dynlockid(int i); struct CRYPTO_dynlock_value *CRYPTO_get_dynlock_value(int i); void CRYPTO_set_dynlock_create_callback(struct CRYPTO_dynlock_value *(*dyn_create_function) (const char *file, int line)); void CRYPTO_set_dynlock_lock_callback(void (*dyn_lock_function) (int mode, struct CRYPTO_dynlock_value *l, const char *file, int line)); void CRYPTO_set_dynlock_destroy_callback(void (*dyn_destroy_function) (struct CRYPTO_dynlock_value *l, const char *file, int line)); struct CRYPTO_dynlock_value *(*CRYPTO_get_dynlock_create_callback(void)) (const char *file, int line); void (*CRYPTO_get_dynlock_lock_callback(void)) (int mode, struct CRYPTO_dynlock_value *l, const char *file, int line); void (*CRYPTO_get_dynlock_destroy_callback(void)) (struct CRYPTO_dynlock_value *l, const char *file, int line); int CRYPTO_set_mem_functions(void *(*m) (size_t), void *(*r) (void *, size_t), void (*f) (void *)); int CRYPTO_set_locked_mem_functions(void *(*m) (size_t), void (*free_func) (void *)); int CRYPTO_set_mem_ex_functions(void *(*m) (size_t, const char *, int), void *(*r) (void *, size_t, const char *, int), void (*f) (void *)); int CRYPTO_set_locked_mem_ex_functions(void *(*m) (size_t, const char *, int), void (*free_func) (void *)); int CRYPTO_set_mem_debug_functions(void (*m) (void *, int, const char *, int, int), void (*r) (void *, void *, int, const char *, int, int), void (*f) (void *, int), void (*so) (long), long (*go) (void)); void CRYPTO_set_mem_info_functions(int (*push_info_fn) (const char *info, const char *file, int line), int (*pop_info_fn) (void), int (*remove_all_info_fn) (void)); void CRYPTO_get_mem_functions(void *(**m) (size_t), void *(**r) (void *, size_t), void (**f) (void *)); void CRYPTO_get_locked_mem_functions(void *(**m) (size_t), void (**f) (void *)); void CRYPTO_get_mem_ex_functions(void *(**m) (size_t, const char *, int), void *(**r) (void *, size_t, const char *, int), void (**f) (void *)); void CRYPTO_get_locked_mem_ex_functions(void *(**m) (size_t, const char *, int), void (**f) (void *)); void CRYPTO_get_mem_debug_functions(void (**m) (void *, int, const char *, int, int), void (**r) (void *, void *, int, const char *, int, int), void (**f) (void *, int), void (**so) (long), long (**go) (void)); void *CRYPTO_malloc_locked(int num, const char *file, int line); void CRYPTO_free_locked(void *); void *CRYPTO_malloc(int num, const char *file, int line); char *CRYPTO_strdup(const char *str, const char *file, int line); void CRYPTO_free(void *); void *CRYPTO_realloc(void *addr, int num, const char *file, int line); void *CRYPTO_realloc_clean(void *addr, int old_num, int num, const char *file, int line); void *CRYPTO_remalloc(void *addr, int num, const char *file, int line); void OPENSSL_cleanse(void *ptr, size_t len); void CRYPTO_set_mem_debug_options(long bits); long CRYPTO_get_mem_debug_options(void); int CRYPTO_push_info_(const char *info, const char *file, int line); int CRYPTO_pop_info(void); int CRYPTO_remove_all_info(void); void CRYPTO_dbg_malloc(void *addr, int num, const char *file, int line, int before_p); void CRYPTO_dbg_realloc(void *addr1, void *addr2, int num, const char *file, int line, int before_p); void CRYPTO_dbg_free(void *addr, int before_p); void CRYPTO_dbg_set_options(long bits); long CRYPTO_dbg_get_options(void); int CRYPTO_dbg_push_info(const char *info, const char *file, int line); int CRYPTO_dbg_pop_info(void); int CRYPTO_dbg_remove_all_info(void); void CRYPTO_mem_leaks_fp(FILE *); void CRYPTO_mem_leaks(struct bio_st *bio); typedef void *CRYPTO_MEM_LEAK_CB (unsigned long, const char *, int, int, void *); void CRYPTO_mem_leaks_cb(CRYPTO_MEM_LEAK_CB *cb); void OpenSSLDie(const char *file, int line, const char *assertion); unsigned long *OPENSSL_ia32cap_loc(void); int OPENSSL_isservice(void); #line 633 "/usr/include/openssl/crypto.h" void OPENSSL_init(void); int CRYPTO_memcmp(const void *a, const void *b, size_t len); void ERR_load_CRYPTO_strings(void); #line 673 "/usr/include/openssl/crypto.h" #line 6 "/usr/include/openssl/comp.h" typedef struct comp_ctx_st COMP_CTX; typedef struct comp_method_st { int type; const char *name; int (*init) (COMP_CTX *ctx); void (*finish) (COMP_CTX *ctx); int (*compress) (COMP_CTX *ctx, unsigned char *out, unsigned int olen, unsigned char *in, unsigned int ilen); int (*expand) (COMP_CTX *ctx, unsigned char *out, unsigned int olen, unsigned char *in, unsigned int ilen); long (*ctrl) (void); long (*callback_ctrl) (void); } COMP_METHOD; struct comp_ctx_st { COMP_METHOD *meth; unsigned long compress_in; unsigned long compress_out; unsigned long expand_in; unsigned long expand_out; CRYPTO_EX_DATA ex_data; }; COMP_CTX *COMP_CTX_new(COMP_METHOD *meth); void COMP_CTX_free(COMP_CTX *ctx); int COMP_compress_block(COMP_CTX *ctx, unsigned char *out, int olen, unsigned char *in, int ilen); int COMP_expand_block(COMP_CTX *ctx, unsigned char *out, int olen, unsigned char *in, int ilen); COMP_METHOD *COMP_rle(void); COMP_METHOD *COMP_zlib(void); void COMP_zlib_cleanup(void); void ERR_load_COMP_strings(void); #line 177 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/bio.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 63 "/usr/include/openssl/bio.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stdarg.h" #line 19 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stdarg.h" #line 27 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stdarg.h" #line 38 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stdarg.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stdarg.h" #line 68 "/usr/include/openssl/bio.h" #line 99 "/usr/include/openssl/bio.h" #line 127 "/usr/include/openssl/bio.h" #line 141 "/usr/include/openssl/bio.h" #line 155 "/usr/include/openssl/bio.h" #line 178 "/usr/include/openssl/bio.h" typedef struct bio_st BIO; void BIO_set_flags(BIO *b, int flags); int BIO_test_flags(const BIO *b, int flags); void BIO_clear_flags(BIO *b, int flags); #line 221 "/usr/include/openssl/bio.h" #line 258 "/usr/include/openssl/bio.h" long (*BIO_get_callback(const BIO *b)) (struct bio_st *, int, const char *, int, long, long); void BIO_set_callback(BIO *b, long (*callback) (struct bio_st *, int, const char *, int, long, long)); char *BIO_get_callback_arg(const BIO *b); void BIO_set_callback_arg(BIO *b, char *arg); const char *BIO_method_name(const BIO *b); int BIO_method_type(const BIO *b); typedef void bio_info_cb (struct bio_st *, int, const char *, int, long, long); typedef struct bio_method_st { int type; const char *name; int (*bwrite) (BIO *, const char *, int); int (*bread) (BIO *, char *, int); int (*bputs) (BIO *, const char *); int (*bgets) (BIO *, char *, int); long (*ctrl) (BIO *, int, long, void *); int (*create) (BIO *); int (*destroy) (BIO *); long (*callback_ctrl) (BIO *, int, bio_info_cb *); } BIO_METHOD; #line 309 "/usr/include/openssl/bio.h" struct bio_st { BIO_METHOD *method; long (*callback) (struct bio_st *, int, const char *, int, long, long); char *cb_arg; int init; int shutdown; int flags; int retry_reason; int num; void *ptr; struct bio_st *next_bio; struct bio_st *prev_bio; int references; unsigned long num_read; unsigned long num_write; CRYPTO_EX_DATA ex_data; }; typedef struct bio_f_buffer_ctx_struct { int ibuf_size; int obuf_size; char *ibuf; int ibuf_len; int ibuf_off; char *obuf; int obuf_len; int obuf_off; } BIO_F_BUFFER_CTX; #line 363 "/usr/include/openssl/bio.h" #line 404 "/usr/include/openssl/bio.h" #line 418 "/usr/include/openssl/bio.h" #line 431 "/usr/include/openssl/bio.h" #line 495 "/usr/include/openssl/bio.h" #line 511 "/usr/include/openssl/bio.h" #line 537 "/usr/include/openssl/bio.h" size_t BIO_ctrl_pending(BIO *b); size_t BIO_ctrl_wpending(BIO *b); size_t BIO_ctrl_get_write_guarantee(BIO *b); size_t BIO_ctrl_get_read_request(BIO *b); int BIO_ctrl_reset_read_request(BIO *b); #line 574 "/usr/include/openssl/bio.h" int BIO_set_ex_data(BIO *bio, int idx, void *data); void *BIO_get_ex_data(BIO *bio, int idx); int BIO_get_ex_new_index(long argl, void *argp, CRYPTO_EX_new *new_func, CRYPTO_EX_dup *dup_func, CRYPTO_EX_free *free_func); unsigned long BIO_number_read(BIO *bio); unsigned long BIO_number_written(BIO *bio); #line 594 "/usr/include/openssl/bio.h" BIO_METHOD *BIO_s_file(void); BIO *BIO_new_file(const char *filename, const char *mode); BIO *BIO_new_fp(FILE *stream, int close_flag); BIO *BIO_new(BIO_METHOD *type); int BIO_set(BIO *a, BIO_METHOD *type); int BIO_free(BIO *a); void BIO_vfree(BIO *a); int BIO_read(BIO *b, void *data, int len); int BIO_gets(BIO *bp, char *buf, int size); int BIO_write(BIO *b, const void *data, int len); int BIO_puts(BIO *bp, const char *buf); int BIO_indent(BIO *b, int indent, int max); long BIO_ctrl(BIO *bp, int cmd, long larg, void *parg); long BIO_callback_ctrl(BIO *b, int cmd, void (*fp) (struct bio_st *, int, const char *, int, long, long)); char *BIO_ptr_ctrl(BIO *bp, int cmd, long larg); long BIO_int_ctrl(BIO *bp, int cmd, long larg, int iarg); BIO *BIO_push(BIO *b, BIO *append); BIO *BIO_pop(BIO *b); void BIO_free_all(BIO *a); BIO *BIO_find_type(BIO *b, int bio_type); BIO *BIO_next(BIO *b); BIO *BIO_get_retry_BIO(BIO *bio, int *reason); int BIO_get_retry_reason(BIO *bio); BIO *BIO_dup_chain(BIO *in); int BIO_nread0(BIO *bio, char **buf); int BIO_nread(BIO *bio, char **buf, int num); int BIO_nwrite0(BIO *bio, char **buf); int BIO_nwrite(BIO *bio, char **buf, int num); long BIO_debug_callback(BIO *bio, int cmd, const char *argp, int argi, long argl, long ret); BIO_METHOD *BIO_s_mem(void); BIO *BIO_new_mem_buf(void *buf, int len); BIO_METHOD *BIO_s_socket(void); BIO_METHOD *BIO_s_connect(void); BIO_METHOD *BIO_s_accept(void); BIO_METHOD *BIO_s_fd(void); BIO_METHOD *BIO_s_log(void); BIO_METHOD *BIO_s_bio(void); BIO_METHOD *BIO_s_null(void); BIO_METHOD *BIO_f_null(void); BIO_METHOD *BIO_f_buffer(void); BIO_METHOD *BIO_f_nbio_test(void); BIO_METHOD *BIO_s_datagram(void); int BIO_sock_should_retry(int i); int BIO_sock_non_fatal_error(int error); int BIO_dgram_non_fatal_error(int error); int BIO_fd_should_retry(int i); int BIO_fd_non_fatal_error(int error); int BIO_dump_cb(int (*cb) (const void *data, size_t len, void *u), void *u, const char *s, int len); int BIO_dump_indent_cb(int (*cb) (const void *data, size_t len, void *u), void *u, const char *s, int len, int indent); int BIO_dump(BIO *b, const char *bytes, int len); int BIO_dump_indent(BIO *b, const char *bytes, int len, int indent); int BIO_dump_fp(FILE *fp, const char *s, int len); int BIO_dump_indent_fp(FILE *fp, const char *s, int len, int indent); struct hostent *BIO_gethostbyname(const char *name); int BIO_sock_error(int sock); int BIO_socket_ioctl(int fd, long type, void *arg); int BIO_socket_nbio(int fd, int mode); int BIO_get_port(const char *str, unsigned short *port_ptr); int BIO_get_host_ip(const char *str, unsigned char *ip); int BIO_get_accept_socket(char *host_port, int mode); int BIO_accept(int sock, char **ip_port); int BIO_sock_init(void); void BIO_sock_cleanup(void); int BIO_set_tcp_ndelay(int sock, int turn_on); BIO *BIO_new_socket(int sock, int close_flag); BIO *BIO_new_dgram(int fd, int close_flag); BIO *BIO_new_fd(int fd, int close_flag); BIO *BIO_new_connect(char *host_port); BIO *BIO_new_accept(char *host_port); int BIO_new_bio_pair(BIO **bio1, size_t writebuf1, BIO **bio2, size_t writebuf2); void BIO_copy_next_retry(BIO *b); int BIO_printf(BIO *bio, const char *format, ...) ; int BIO_vprintf(BIO *bio, const char *format, va_list args) ; int BIO_snprintf(char *buf, size_t n, const char *format, ...) ; int BIO_vsnprintf(char *buf, size_t n, const char *format, va_list args) ; void ERR_load_BIO_strings(void); #line 776 "/usr/include/openssl/bio.h" #line 807 "/usr/include/openssl/bio.h" #line 180 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/x509.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 68 "/usr/include/openssl/x509.h" #line 1 "/usr/include/openssl/symhacks.h" #line 436 "/usr/include/openssl/symhacks.h" #line 69 "/usr/include/openssl/x509.h" #line 1 "/usr/include/openssl/buffer.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef long ptrdiff_t; #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 69 "/usr/include/openssl/buffer.h" struct buf_mem_st { int length; char *data; int max; }; BUF_MEM *BUF_MEM_new(void); void BUF_MEM_free(BUF_MEM *a); int BUF_MEM_grow(BUF_MEM *str, int len); int BUF_MEM_grow_clean(BUF_MEM *str, int len); char *BUF_strdup(const char *str); char *BUF_strndup(const char *str, size_t siz); void *BUF_memdup(const void *data, size_t siz); size_t BUF_strlcpy(char *dst, const char *src, size_t siz); size_t BUF_strlcat(char *dst, const char *src, size_t siz); void ERR_load_BUF_strings(void); #line 111 "/usr/include/openssl/buffer.h" #line 71 "/usr/include/openssl/x509.h" #line 1 "/usr/include/openssl/evp.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 67 "/usr/include/openssl/evp.h" #line 1 "/usr/include/openssl/symhacks.h" #line 436 "/usr/include/openssl/symhacks.h" #line 73 "/usr/include/openssl/evp.h" #line 1 "/usr/include/openssl/objects.h" #line 1 "/usr/include/openssl/obj_mac.h" #line 66 "/usr/include/openssl/objects.h" #line 963 "/usr/include/openssl/objects.h" #line 1 "/usr/include/openssl/asn1.h" #line 1 "/usr/include/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 30 "/usr/include/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 40 "/usr/include/time.h" #line 1 "/usr/include/bits/time.h" #line 43 "/usr/include/bits/time.h" #line 44 "/usr/include/time.h" typedef __clock_t clock_t; #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" #line 129 "/usr/include/time.h" struct tm { int tm_sec; int tm_min; int tm_hour; int tm_mday; int tm_mon; int tm_year; int tm_wday; int tm_yday; int tm_isdst; long int tm_gmtoff; const char *tm_zone; }; struct itimerspec { struct timespec it_interval; struct timespec it_value; }; struct sigevent; #line 179 "/usr/include/time.h" extern clock_t clock (void) ; extern time_t time (time_t *__timer) ; extern double difftime (time_t __time1, time_t __time0) ; extern time_t mktime (struct tm *__tp) ; extern size_t strftime (char * __s, size_t __maxsize, const char * __format, const struct tm * __tp) ; #line 212 "/usr/include/time.h" #line 227 "/usr/include/time.h" extern struct tm *gmtime (const time_t *__timer) ; extern struct tm *localtime (const time_t *__timer) ; extern struct tm *gmtime_r (const time_t * __timer, struct tm * __tp) ; extern struct tm *localtime_r (const time_t * __timer, struct tm * __tp) ; extern char *asctime (const struct tm *__tp) ; extern char *ctime (const time_t *__timer) ; extern char *asctime_r (const struct tm * __tp, char * __buf) ; extern char *ctime_r (const time_t * __timer, char * __buf) ; extern char *__tzname[2]; extern int __daylight; extern long int __timezone; extern char *tzname[2]; extern void tzset (void) ; extern int daylight; extern long int timezone; extern int stime (const time_t *__when) ; extern time_t timegm (struct tm *__tp) ; extern time_t timelocal (struct tm *__tp) ; extern int dysize (int __year) ; extern int nanosleep (const struct timespec *__requested_time, struct timespec *__remaining); extern int clock_getres (clockid_t __clock_id, struct timespec *__res) ; extern int clock_gettime (clockid_t __clock_id, struct timespec *__tp) ; extern int clock_settime (clockid_t __clock_id, const struct timespec *__tp) ; extern int clock_nanosleep (clockid_t __clock_id, int __flags, const struct timespec *__req, struct timespec *__rem); extern int clock_getcpuclockid (pid_t __pid, clockid_t *__clock_id) ; extern int timer_create (clockid_t __clock_id, struct sigevent * __evp, timer_t * __timerid) ; extern int timer_delete (timer_t __timerid) ; extern int timer_settime (timer_t __timerid, int __flags, const struct itimerspec * __value, struct itimerspec * __ovalue) ; extern int timer_gettime (timer_t __timerid, struct itimerspec *__value) ; extern int timer_getoverrun (timer_t __timerid) ; #line 400 "/usr/include/time.h" #line 415 "/usr/include/time.h" #line 63 "/usr/include/openssl/asn1.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 64 "/usr/include/openssl/asn1.h" #line 1 "/usr/include/openssl/symhacks.h" #line 436 "/usr/include/openssl/symhacks.h" #line 71 "/usr/include/openssl/asn1.h" #line 1 "/usr/include/openssl/bn.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 76 "/usr/include/openssl/bn.h" #line 119 "/usr/include/openssl/bn.h" #line 143 "/usr/include/openssl/bn.h" #line 169 "/usr/include/openssl/bn.h" #line 200 "/usr/include/openssl/bn.h" #line 223 "/usr/include/openssl/bn.h" #line 246 "/usr/include/openssl/bn.h" #line 268 "/usr/include/openssl/bn.h" #line 288 "/usr/include/openssl/bn.h" #line 299 "/usr/include/openssl/bn.h" struct bignum_st { unsigned long *d; int top; int dmax; int neg; int flags; }; struct bn_mont_ctx_st { int ri; BIGNUM RR; BIGNUM N; BIGNUM Ni; unsigned long n0; int flags; }; struct bn_recp_ctx_st { BIGNUM N; BIGNUM Nr; int num_bits; int shift; int flags; }; struct bn_gencb_st { unsigned int ver; void *arg; union { void (*cb_1) (int, int, void *); int (*cb_2) (int, int, BN_GENCB *); } cb; }; int BN_GENCB_call(BN_GENCB *cb, int a, int b); #line 387 "/usr/include/openssl/bn.h" #line 397 "/usr/include/openssl/bn.h" #line 410 "/usr/include/openssl/bn.h" const BIGNUM *BN_value_one(void); char *BN_options(void); BN_CTX *BN_CTX_new(void); void BN_CTX_init(BN_CTX *c); void BN_CTX_free(BN_CTX *c); void BN_CTX_start(BN_CTX *ctx); BIGNUM *BN_CTX_get(BN_CTX *ctx); void BN_CTX_end(BN_CTX *ctx); int BN_rand(BIGNUM *rnd, int bits, int top, int bottom); int BN_pseudo_rand(BIGNUM *rnd, int bits, int top, int bottom); int BN_rand_range(BIGNUM *rnd, const BIGNUM *range); int BN_pseudo_rand_range(BIGNUM *rnd, const BIGNUM *range); int BN_num_bits(const BIGNUM *a); int BN_num_bits_word(unsigned long); BIGNUM *BN_new(void); void BN_init(BIGNUM *); void BN_clear_free(BIGNUM *a); BIGNUM *BN_copy(BIGNUM *a, const BIGNUM *b); void BN_swap(BIGNUM *a, BIGNUM *b); BIGNUM *BN_bin2bn(const unsigned char *s, int len, BIGNUM *ret); int BN_bn2bin(const BIGNUM *a, unsigned char *to); BIGNUM *BN_mpi2bn(const unsigned char *s, int len, BIGNUM *ret); int BN_bn2mpi(const BIGNUM *a, unsigned char *to); int BN_sub(BIGNUM *r, const BIGNUM *a, const BIGNUM *b); int BN_usub(BIGNUM *r, const BIGNUM *a, const BIGNUM *b); int BN_uadd(BIGNUM *r, const BIGNUM *a, const BIGNUM *b); int BN_add(BIGNUM *r, const BIGNUM *a, const BIGNUM *b); int BN_mul(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, BN_CTX *ctx); int BN_sqr(BIGNUM *r, const BIGNUM *a, BN_CTX *ctx); void BN_set_negative(BIGNUM *b, int n); int BN_div(BIGNUM *dv, BIGNUM *rem, const BIGNUM *m, const BIGNUM *d, BN_CTX *ctx); int BN_nnmod(BIGNUM *r, const BIGNUM *m, const BIGNUM *d, BN_CTX *ctx); int BN_mod_add(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, const BIGNUM *m, BN_CTX *ctx); int BN_mod_add_quick(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, const BIGNUM *m); int BN_mod_sub(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, const BIGNUM *m, BN_CTX *ctx); int BN_mod_sub_quick(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, const BIGNUM *m); int BN_mod_mul(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, const BIGNUM *m, BN_CTX *ctx); int BN_mod_sqr(BIGNUM *r, const BIGNUM *a, const BIGNUM *m, BN_CTX *ctx); int BN_mod_lshift1(BIGNUM *r, const BIGNUM *a, const BIGNUM *m, BN_CTX *ctx); int BN_mod_lshift1_quick(BIGNUM *r, const BIGNUM *a, const BIGNUM *m); int BN_mod_lshift(BIGNUM *r, const BIGNUM *a, int n, const BIGNUM *m, BN_CTX *ctx); int BN_mod_lshift_quick(BIGNUM *r, const BIGNUM *a, int n, const BIGNUM *m); unsigned long BN_mod_word(const BIGNUM *a, unsigned long w); unsigned long BN_div_word(BIGNUM *a, unsigned long w); int BN_mul_word(BIGNUM *a, unsigned long w); int BN_add_word(BIGNUM *a, unsigned long w); int BN_sub_word(BIGNUM *a, unsigned long w); int BN_set_word(BIGNUM *a, unsigned long w); unsigned long BN_get_word(const BIGNUM *a); int BN_cmp(const BIGNUM *a, const BIGNUM *b); void BN_free(BIGNUM *a); int BN_is_bit_set(const BIGNUM *a, int n); int BN_lshift(BIGNUM *r, const BIGNUM *a, int n); int BN_lshift1(BIGNUM *r, const BIGNUM *a); int BN_exp(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, BN_CTX *ctx); int BN_mod_exp(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, const BIGNUM *m, BN_CTX *ctx); int BN_mod_exp_mont(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, const BIGNUM *m, BN_CTX *ctx, BN_MONT_CTX *m_ctx); int BN_mod_exp_mont_consttime(BIGNUM *rr, const BIGNUM *a, const BIGNUM *p, const BIGNUM *m, BN_CTX *ctx, BN_MONT_CTX *in_mont); int BN_mod_exp_mont_word(BIGNUM *r, unsigned long a, const BIGNUM *p, const BIGNUM *m, BN_CTX *ctx, BN_MONT_CTX *m_ctx); int BN_mod_exp2_mont(BIGNUM *r, const BIGNUM *a1, const BIGNUM *p1, const BIGNUM *a2, const BIGNUM *p2, const BIGNUM *m, BN_CTX *ctx, BN_MONT_CTX *m_ctx); int BN_mod_exp_simple(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, const BIGNUM *m, BN_CTX *ctx); int BN_mask_bits(BIGNUM *a, int n); int BN_print_fp(FILE *fp, const BIGNUM *a); int BN_print(BIO *fp, const BIGNUM *a); int BN_reciprocal(BIGNUM *r, const BIGNUM *m, int len, BN_CTX *ctx); int BN_rshift(BIGNUM *r, const BIGNUM *a, int n); int BN_rshift1(BIGNUM *r, const BIGNUM *a); void BN_clear(BIGNUM *a); BIGNUM *BN_dup(const BIGNUM *a); int BN_ucmp(const BIGNUM *a, const BIGNUM *b); int BN_set_bit(BIGNUM *a, int n); int BN_clear_bit(BIGNUM *a, int n); char *BN_bn2hex(const BIGNUM *a); char *BN_bn2dec(const BIGNUM *a); int BN_hex2bn(BIGNUM **a, const char *str); int BN_dec2bn(BIGNUM **a, const char *str); int BN_gcd(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, BN_CTX *ctx); int BN_kronecker(const BIGNUM *a, const BIGNUM *b, BN_CTX *ctx); BIGNUM *BN_mod_inverse(BIGNUM *ret, const BIGNUM *a, const BIGNUM *n, BN_CTX *ctx); BIGNUM *BN_mod_sqrt(BIGNUM *ret, const BIGNUM *a, const BIGNUM *n, BN_CTX *ctx); void BN_consttime_swap(unsigned long swap, BIGNUM *a, BIGNUM *b, int nwords); BIGNUM *BN_generate_prime(BIGNUM *ret, int bits, int safe, const BIGNUM *add, const BIGNUM *rem, void (*callback) (int, int, void *), void *cb_arg); int BN_is_prime(const BIGNUM *p, int nchecks, void (*callback) (int, int, void *), BN_CTX *ctx, void *cb_arg); int BN_is_prime_fasttest(const BIGNUM *p, int nchecks, void (*callback) (int, int, void *), BN_CTX *ctx, void *cb_arg, int do_trial_division); int BN_generate_prime_ex(BIGNUM *ret, int bits, int safe, const BIGNUM *add, const BIGNUM *rem, BN_GENCB *cb); int BN_is_prime_ex(const BIGNUM *p, int nchecks, BN_CTX *ctx, BN_GENCB *cb); int BN_is_prime_fasttest_ex(const BIGNUM *p, int nchecks, BN_CTX *ctx, int do_trial_division, BN_GENCB *cb); int BN_X931_generate_Xpq(BIGNUM *Xp, BIGNUM *Xq, int nbits, BN_CTX *ctx); int BN_X931_derive_prime_ex(BIGNUM *p, BIGNUM *p1, BIGNUM *p2, const BIGNUM *Xp, const BIGNUM *Xp1, const BIGNUM *Xp2, const BIGNUM *e, BN_CTX *ctx, BN_GENCB *cb); int BN_X931_generate_prime_ex(BIGNUM *p, BIGNUM *p1, BIGNUM *p2, BIGNUM *Xp1, BIGNUM *Xp2, const BIGNUM *Xp, const BIGNUM *e, BN_CTX *ctx, BN_GENCB *cb); BN_MONT_CTX *BN_MONT_CTX_new(void); void BN_MONT_CTX_init(BN_MONT_CTX *ctx); int BN_mod_mul_montgomery(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, BN_MONT_CTX *mont, BN_CTX *ctx); int BN_from_montgomery(BIGNUM *r, const BIGNUM *a, BN_MONT_CTX *mont, BN_CTX *ctx); void BN_MONT_CTX_free(BN_MONT_CTX *mont); int BN_MONT_CTX_set(BN_MONT_CTX *mont, const BIGNUM *mod, BN_CTX *ctx); BN_MONT_CTX *BN_MONT_CTX_copy(BN_MONT_CTX *to, BN_MONT_CTX *from); BN_MONT_CTX *BN_MONT_CTX_set_locked(BN_MONT_CTX **pmont, int lock, const BIGNUM *mod, BN_CTX *ctx); BN_BLINDING *BN_BLINDING_new(const BIGNUM *A, const BIGNUM *Ai, BIGNUM *mod); void BN_BLINDING_free(BN_BLINDING *b); int BN_BLINDING_update(BN_BLINDING *b, BN_CTX *ctx); int BN_BLINDING_convert(BIGNUM *n, BN_BLINDING *b, BN_CTX *ctx); int BN_BLINDING_invert(BIGNUM *n, BN_BLINDING *b, BN_CTX *ctx); int BN_BLINDING_convert_ex(BIGNUM *n, BIGNUM *r, BN_BLINDING *b, BN_CTX *); int BN_BLINDING_invert_ex(BIGNUM *n, const BIGNUM *r, BN_BLINDING *b, BN_CTX *); unsigned long BN_BLINDING_get_thread_id(const BN_BLINDING *); void BN_BLINDING_set_thread_id(BN_BLINDING *, unsigned long); unsigned long BN_BLINDING_get_flags(const BN_BLINDING *); void BN_BLINDING_set_flags(BN_BLINDING *, unsigned long); BN_BLINDING *BN_BLINDING_create_param(BN_BLINDING *b, const BIGNUM *e, BIGNUM *m, BN_CTX *ctx, int (*bn_mod_exp) (BIGNUM *r, const BIGNUM *a, const BIGNUM *p, const BIGNUM *m, BN_CTX *ctx, BN_MONT_CTX *m_ctx), BN_MONT_CTX *m_ctx); void BN_set_params(int mul, int high, int low, int mont); int BN_get_params(int which); void BN_RECP_CTX_init(BN_RECP_CTX *recp); BN_RECP_CTX *BN_RECP_CTX_new(void); void BN_RECP_CTX_free(BN_RECP_CTX *recp); int BN_RECP_CTX_set(BN_RECP_CTX *recp, const BIGNUM *rdiv, BN_CTX *ctx); int BN_mod_mul_reciprocal(BIGNUM *r, const BIGNUM *x, const BIGNUM *y, BN_RECP_CTX *recp, BN_CTX *ctx); int BN_mod_exp_recp(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, const BIGNUM *m, BN_CTX *ctx); int BN_div_recp(BIGNUM *dv, BIGNUM *rem, const BIGNUM *m, BN_RECP_CTX *recp, BN_CTX *ctx); int BN_GF2m_add(BIGNUM *r, const BIGNUM *a, const BIGNUM *b); int BN_GF2m_mod(BIGNUM *r, const BIGNUM *a, const BIGNUM *p); int BN_GF2m_mod_mul(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, const BIGNUM *p, BN_CTX *ctx); int BN_GF2m_mod_sqr(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, BN_CTX *ctx); int BN_GF2m_mod_inv(BIGNUM *r, const BIGNUM *b, const BIGNUM *p, BN_CTX *ctx); int BN_GF2m_mod_div(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, const BIGNUM *p, BN_CTX *ctx); int BN_GF2m_mod_exp(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, const BIGNUM *p, BN_CTX *ctx); int BN_GF2m_mod_sqrt(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, BN_CTX *ctx); int BN_GF2m_mod_solve_quad(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, BN_CTX *ctx); int BN_GF2m_mod_arr(BIGNUM *r, const BIGNUM *a, const unsigned int p[]); int BN_GF2m_mod_mul_arr(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, const unsigned int p[], BN_CTX *ctx); int BN_GF2m_mod_sqr_arr(BIGNUM *r, const BIGNUM *a, const unsigned int p[], BN_CTX *ctx); int BN_GF2m_mod_inv_arr(BIGNUM *r, const BIGNUM *b, const unsigned int p[], BN_CTX *ctx); int BN_GF2m_mod_div_arr(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, const unsigned int p[], BN_CTX *ctx); int BN_GF2m_mod_exp_arr(BIGNUM *r, const BIGNUM *a, const BIGNUM *b, const unsigned int p[], BN_CTX *ctx); int BN_GF2m_mod_sqrt_arr(BIGNUM *r, const BIGNUM *a, const unsigned int p[], BN_CTX *ctx); int BN_GF2m_mod_solve_quad_arr(BIGNUM *r, const BIGNUM *a, const unsigned int p[], BN_CTX *ctx); int BN_GF2m_poly2arr(const BIGNUM *a, unsigned int p[], int max); int BN_GF2m_arr2poly(const unsigned int p[], BIGNUM *a); int BN_nist_mod_192(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, BN_CTX *ctx); int BN_nist_mod_224(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, BN_CTX *ctx); int BN_nist_mod_256(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, BN_CTX *ctx); int BN_nist_mod_384(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, BN_CTX *ctx); int BN_nist_mod_521(BIGNUM *r, const BIGNUM *a, const BIGNUM *p, BN_CTX *ctx); const BIGNUM *BN_get0_nist_prime_192(void); const BIGNUM *BN_get0_nist_prime_224(void); const BIGNUM *BN_get0_nist_prime_256(void); const BIGNUM *BN_get0_nist_prime_384(void); const BIGNUM *BN_get0_nist_prime_521(void); BIGNUM *bn_expand2(BIGNUM *a, int words); BIGNUM *bn_dup_expand(const BIGNUM *a, int words); #line 796 "/usr/include/openssl/bn.h" #line 815 "/usr/include/openssl/bn.h" unsigned long bn_mul_add_words(unsigned long *rp, const unsigned long *ap, int num, unsigned long w); unsigned long bn_mul_words(unsigned long *rp, const unsigned long *ap, int num, unsigned long w); void bn_sqr_words(unsigned long *rp, const unsigned long *ap, int num); unsigned long bn_div_words(unsigned long h, unsigned long l, unsigned long d); unsigned long bn_add_words(unsigned long *rp, const unsigned long *ap, const unsigned long *bp, int num); unsigned long bn_sub_words(unsigned long *rp, const unsigned long *ap, const unsigned long *bp, int num); BIGNUM *get_rfc2409_prime_768(BIGNUM *bn); BIGNUM *get_rfc2409_prime_1024(BIGNUM *bn); BIGNUM *get_rfc3526_prime_1536(BIGNUM *bn); BIGNUM *get_rfc3526_prime_2048(BIGNUM *bn); BIGNUM *get_rfc3526_prime_3072(BIGNUM *bn); BIGNUM *get_rfc3526_prime_4096(BIGNUM *bn); BIGNUM *get_rfc3526_prime_6144(BIGNUM *bn); BIGNUM *get_rfc3526_prime_8192(BIGNUM *bn); int BN_bntest_rand(BIGNUM *rnd, int bits, int top, int bottom); void ERR_load_BN_strings(void); #line 892 "/usr/include/openssl/bn.h" #line 913 "/usr/include/openssl/bn.h" #line 75 "/usr/include/openssl/asn1.h" #line 132 "/usr/include/openssl/asn1.h" #line 152 "/usr/include/openssl/asn1.h" #line 161 "/usr/include/openssl/asn1.h" struct X509_algor_st; typedef struct asn1_ctx_st { unsigned char *p; int eos; int error; int inf; int tag; int xclass; long slen; unsigned char *max; unsigned char *q; unsigned char **pp; int line; } ASN1_CTX; typedef struct asn1_const_ctx_st { const unsigned char *p; int eos; int error; int inf; int tag; int xclass; long slen; const unsigned char *max; const unsigned char *q; const unsigned char **pp; int line; } ASN1_const_CTX; typedef struct asn1_object_st { const char *sn, *ln; int nid; int length; unsigned char *data; int flags; } ASN1_OBJECT; typedef struct asn1_string_st { int length; int type; unsigned char *data; long flags; } ASN1_STRING; typedef struct ASN1_ENCODING_st { unsigned char *enc; long len; int modified; } ASN1_ENCODING; typedef struct asn1_string_table_st { int nid; long minsize; long maxsize; unsigned long mask; unsigned long flags; } ASN1_STRING_TABLE; #line 287 "/usr/include/openssl/asn1.h" typedef struct ASN1_TEMPLATE_st ASN1_TEMPLATE; typedef struct ASN1_ITEM_st ASN1_ITEM; typedef struct ASN1_TLC_st ASN1_TLC; typedef struct ASN1_VALUE_st ASN1_VALUE; #line 349 "/usr/include/openssl/asn1.h" typedef void *d2i_of_void(void * *,const unsigned char * *,long); typedef int i2d_of_void(void *,unsigned char * *); typedef const ASN1_ITEM ASN1_ITEM_EXP; #line 430 "/usr/include/openssl/asn1.h" #line 509 "/usr/include/openssl/asn1.h" typedef struct asn1_type_st { int type; union { char *ptr; ASN1_BOOLEAN boolean; ASN1_STRING *asn1_string; ASN1_OBJECT *object; ASN1_INTEGER *integer; ASN1_ENUMERATED *enumerated; ASN1_BIT_STRING *bit_string; ASN1_OCTET_STRING *octet_string; ASN1_PRINTABLESTRING *printablestring; ASN1_T61STRING *t61string; ASN1_IA5STRING *ia5string; ASN1_GENERALSTRING *generalstring; ASN1_BMPSTRING *bmpstring; ASN1_UNIVERSALSTRING *universalstring; ASN1_UTCTIME *utctime; ASN1_GENERALIZEDTIME *generalizedtime; ASN1_VISIBLESTRING *visiblestring; ASN1_UTF8STRING *utf8string; ASN1_STRING *set; ASN1_STRING *sequence; ASN1_VALUE *asn1_value; } value; } ASN1_TYPE; typedef struct asn1_method_st { i2d_of_void *i2d; d2i_of_void *d2i; void *(*create) (void); void (*destroy) (void *); } ASN1_METHOD; typedef struct asn1_header_st { ASN1_OCTET_STRING *header; void *data; ASN1_METHOD *meth; } ASN1_HEADER; typedef struct BIT_STRING_BITNAME_st { int bitnum; const char *lname; const char *sname; } BIT_STRING_BITNAME; #line 584 "/usr/include/openssl/asn1.h" #line 591 "/usr/include/openssl/asn1.h" #line 598 "/usr/include/openssl/asn1.h" #line 611 "/usr/include/openssl/asn1.h" #line 627 "/usr/include/openssl/asn1.h" #line 634 "/usr/include/openssl/asn1.h" #line 648 "/usr/include/openssl/asn1.h" #line 656 "/usr/include/openssl/asn1.h" #line 664 "/usr/include/openssl/asn1.h" #line 674 "/usr/include/openssl/asn1.h" #line 684 "/usr/include/openssl/asn1.h" #line 696 "/usr/include/openssl/asn1.h" #line 722 "/usr/include/openssl/asn1.h" #line 732 "/usr/include/openssl/asn1.h" #line 742 "/usr/include/openssl/asn1.h" #line 752 "/usr/include/openssl/asn1.h" #line 762 "/usr/include/openssl/asn1.h" ASN1_TYPE *ASN1_TYPE_new(void); void ASN1_TYPE_free(ASN1_TYPE *a); ASN1_TYPE *d2i_ASN1_TYPE(ASN1_TYPE * *a, const unsigned char * *in, long len); int i2d_ASN1_TYPE(ASN1_TYPE *a, unsigned char * *out); extern const ASN1_ITEM ASN1_ANY_it; int ASN1_TYPE_get(ASN1_TYPE *a); void ASN1_TYPE_set(ASN1_TYPE *a, int type, void *value); int ASN1_TYPE_set1(ASN1_TYPE *a, int type, const void *value); int ASN1_TYPE_cmp(const ASN1_TYPE *a, const ASN1_TYPE *b); ASN1_OBJECT *ASN1_OBJECT_new(void); void ASN1_OBJECT_free(ASN1_OBJECT *a); int i2d_ASN1_OBJECT(ASN1_OBJECT *a, unsigned char **pp); ASN1_OBJECT *c2i_ASN1_OBJECT(ASN1_OBJECT **a, const unsigned char **pp, long length); ASN1_OBJECT *d2i_ASN1_OBJECT(ASN1_OBJECT **a, const unsigned char **pp, long length); extern const ASN1_ITEM ASN1_OBJECT_it; ASN1_STRING *ASN1_STRING_new(void); void ASN1_STRING_free(ASN1_STRING *a); ASN1_STRING *ASN1_STRING_dup(ASN1_STRING *a); ASN1_STRING *ASN1_STRING_type_new(int type); int ASN1_STRING_cmp(ASN1_STRING *a, ASN1_STRING *b); int ASN1_STRING_set(ASN1_STRING *str, const void *data, int len); void ASN1_STRING_set0(ASN1_STRING *str, void *data, int len); int ASN1_STRING_length(ASN1_STRING *x); void ASN1_STRING_length_set(ASN1_STRING *x, int n); int ASN1_STRING_type(ASN1_STRING *x); unsigned char *ASN1_STRING_data(ASN1_STRING *x); ASN1_BIT_STRING *ASN1_BIT_STRING_new(void); void ASN1_BIT_STRING_free(ASN1_BIT_STRING *a); ASN1_BIT_STRING *d2i_ASN1_BIT_STRING(ASN1_BIT_STRING * *a, const unsigned char * *in, long len); int i2d_ASN1_BIT_STRING(ASN1_BIT_STRING *a, unsigned char * *out); extern const ASN1_ITEM ASN1_BIT_STRING_it; int i2c_ASN1_BIT_STRING(ASN1_BIT_STRING *a, unsigned char **pp); ASN1_BIT_STRING *c2i_ASN1_BIT_STRING(ASN1_BIT_STRING **a, const unsigned char **pp, long length); int ASN1_BIT_STRING_set(ASN1_BIT_STRING *a, unsigned char *d, int length); int ASN1_BIT_STRING_set_bit(ASN1_BIT_STRING *a, int n, int value); int ASN1_BIT_STRING_get_bit(ASN1_BIT_STRING *a, int n); int ASN1_BIT_STRING_name_print(BIO *out, ASN1_BIT_STRING *bs, BIT_STRING_BITNAME *tbl, int indent); int ASN1_BIT_STRING_num_asc(char *name, BIT_STRING_BITNAME *tbl); int ASN1_BIT_STRING_set_asc(ASN1_BIT_STRING *bs, char *name, int value, BIT_STRING_BITNAME *tbl); int i2d_ASN1_BOOLEAN(int a, unsigned char **pp); int d2i_ASN1_BOOLEAN(int *a, const unsigned char **pp, long length); ASN1_INTEGER *ASN1_INTEGER_new(void); void ASN1_INTEGER_free(ASN1_INTEGER *a); ASN1_INTEGER *d2i_ASN1_INTEGER(ASN1_INTEGER * *a, const unsigned char * *in, long len); int i2d_ASN1_INTEGER(ASN1_INTEGER *a, unsigned char * *out); extern const ASN1_ITEM ASN1_INTEGER_it; int i2c_ASN1_INTEGER(ASN1_INTEGER *a, unsigned char **pp); ASN1_INTEGER *c2i_ASN1_INTEGER(ASN1_INTEGER **a, const unsigned char **pp, long length); ASN1_INTEGER *d2i_ASN1_UINTEGER(ASN1_INTEGER **a, const unsigned char **pp, long length); ASN1_INTEGER *ASN1_INTEGER_dup(ASN1_INTEGER *x); int ASN1_INTEGER_cmp(ASN1_INTEGER *x, ASN1_INTEGER *y); ASN1_ENUMERATED *ASN1_ENUMERATED_new(void); void ASN1_ENUMERATED_free(ASN1_ENUMERATED *a); ASN1_ENUMERATED *d2i_ASN1_ENUMERATED(ASN1_ENUMERATED * *a, const unsigned char * *in, long len); int i2d_ASN1_ENUMERATED(ASN1_ENUMERATED *a, unsigned char * *out); extern const ASN1_ITEM ASN1_ENUMERATED_it; int ASN1_UTCTIME_check(ASN1_UTCTIME *a); ASN1_UTCTIME *ASN1_UTCTIME_set(ASN1_UTCTIME *s, time_t t); int ASN1_UTCTIME_set_string(ASN1_UTCTIME *s, const char *str); int ASN1_UTCTIME_cmp_time_t(const ASN1_UTCTIME *s, time_t t); int ASN1_GENERALIZEDTIME_check(ASN1_GENERALIZEDTIME *a); ASN1_GENERALIZEDTIME *ASN1_GENERALIZEDTIME_set(ASN1_GENERALIZEDTIME *s, time_t t); int ASN1_GENERALIZEDTIME_set_string(ASN1_GENERALIZEDTIME *s, const char *str); ASN1_OCTET_STRING *ASN1_OCTET_STRING_new(void); void ASN1_OCTET_STRING_free(ASN1_OCTET_STRING *a); ASN1_OCTET_STRING *d2i_ASN1_OCTET_STRING(ASN1_OCTET_STRING * *a, const unsigned char * *in, long len); int i2d_ASN1_OCTET_STRING(ASN1_OCTET_STRING *a, unsigned char * *out); extern const ASN1_ITEM ASN1_OCTET_STRING_it; ASN1_OCTET_STRING *ASN1_OCTET_STRING_dup(ASN1_OCTET_STRING *a); int ASN1_OCTET_STRING_cmp(ASN1_OCTET_STRING *a, ASN1_OCTET_STRING *b); int ASN1_OCTET_STRING_set(ASN1_OCTET_STRING *str, const unsigned char *data, int len); ASN1_VISIBLESTRING *ASN1_VISIBLESTRING_new(void); void ASN1_VISIBLESTRING_free(ASN1_VISIBLESTRING *a); ASN1_VISIBLESTRING *d2i_ASN1_VISIBLESTRING(ASN1_VISIBLESTRING * *a, const unsigned char * *in, long len); int i2d_ASN1_VISIBLESTRING(ASN1_VISIBLESTRING *a, unsigned char * *out); extern const ASN1_ITEM ASN1_VISIBLESTRING_it; ASN1_UNIVERSALSTRING *ASN1_UNIVERSALSTRING_new(void); void ASN1_UNIVERSALSTRING_free(ASN1_UNIVERSALSTRING *a); ASN1_UNIVERSALSTRING *d2i_ASN1_UNIVERSALSTRING(ASN1_UNIVERSALSTRING * *a, const unsigned char * *in, long len); int i2d_ASN1_UNIVERSALSTRING(ASN1_UNIVERSALSTRING *a, unsigned char * *out); extern const ASN1_ITEM ASN1_UNIVERSALSTRING_it; ASN1_UTF8STRING *ASN1_UTF8STRING_new(void); void ASN1_UTF8STRING_free(ASN1_UTF8STRING *a); ASN1_UTF8STRING *d2i_ASN1_UTF8STRING(ASN1_UTF8STRING * *a, const unsigned char * *in, long len); int i2d_ASN1_UTF8STRING(ASN1_UTF8STRING *a, unsigned char * *out); extern const ASN1_ITEM ASN1_UTF8STRING_it; ASN1_NULL *ASN1_NULL_new(void); void ASN1_NULL_free(ASN1_NULL *a); ASN1_NULL *d2i_ASN1_NULL(ASN1_NULL * *a, const unsigned char * *in, long len); int i2d_ASN1_NULL(ASN1_NULL *a, unsigned char * *out); extern const ASN1_ITEM ASN1_NULL_it; ASN1_BMPSTRING *ASN1_BMPSTRING_new(void); void ASN1_BMPSTRING_free(ASN1_BMPSTRING *a); ASN1_BMPSTRING *d2i_ASN1_BMPSTRING(ASN1_BMPSTRING * *a, const unsigned char * *in, long len); int i2d_ASN1_BMPSTRING(ASN1_BMPSTRING *a, unsigned char * *out); extern const ASN1_ITEM ASN1_BMPSTRING_it; int UTF8_getc(const unsigned char *str, int len, unsigned long *val); int UTF8_putc(unsigned char *str, int len, unsigned long value); ASN1_STRING *ASN1_PRINTABLE_new(void); void ASN1_PRINTABLE_free(ASN1_STRING *a); ASN1_STRING *d2i_ASN1_PRINTABLE(ASN1_STRING * *a, const unsigned char * *in, long len); int i2d_ASN1_PRINTABLE(ASN1_STRING *a, unsigned char * *out); extern const ASN1_ITEM ASN1_PRINTABLE_it; ASN1_STRING *DIRECTORYSTRING_new(void); void DIRECTORYSTRING_free(ASN1_STRING *a); ASN1_STRING *d2i_DIRECTORYSTRING(ASN1_STRING * *a, const unsigned char * *in, long len); int i2d_DIRECTORYSTRING(ASN1_STRING *a, unsigned char * *out); extern const ASN1_ITEM DIRECTORYSTRING_it; ASN1_STRING *DISPLAYTEXT_new(void); void DISPLAYTEXT_free(ASN1_STRING *a); ASN1_STRING *d2i_DISPLAYTEXT(ASN1_STRING * *a, const unsigned char * *in, long len); int i2d_DISPLAYTEXT(ASN1_STRING *a, unsigned char * *out); extern const ASN1_ITEM DISPLAYTEXT_it; ASN1_PRINTABLESTRING *ASN1_PRINTABLESTRING_new(void); void ASN1_PRINTABLESTRING_free(ASN1_PRINTABLESTRING *a); ASN1_PRINTABLESTRING *d2i_ASN1_PRINTABLESTRING(ASN1_PRINTABLESTRING * *a, const unsigned char * *in, long len); int i2d_ASN1_PRINTABLESTRING(ASN1_PRINTABLESTRING *a, unsigned char * *out); extern const ASN1_ITEM ASN1_PRINTABLESTRING_it; ASN1_T61STRING *ASN1_T61STRING_new(void); void ASN1_T61STRING_free(ASN1_T61STRING *a); ASN1_T61STRING *d2i_ASN1_T61STRING(ASN1_T61STRING * *a, const unsigned char * *in, long len); int i2d_ASN1_T61STRING(ASN1_T61STRING *a, unsigned char * *out); extern const ASN1_ITEM ASN1_T61STRING_it; ASN1_IA5STRING *ASN1_IA5STRING_new(void); void ASN1_IA5STRING_free(ASN1_IA5STRING *a); ASN1_IA5STRING *d2i_ASN1_IA5STRING(ASN1_IA5STRING * *a, const unsigned char * *in, long len); int i2d_ASN1_IA5STRING(ASN1_IA5STRING *a, unsigned char * *out); extern const ASN1_ITEM ASN1_IA5STRING_it; ASN1_GENERALSTRING *ASN1_GENERALSTRING_new(void); void ASN1_GENERALSTRING_free(ASN1_GENERALSTRING *a); ASN1_GENERALSTRING *d2i_ASN1_GENERALSTRING(ASN1_GENERALSTRING * *a, const unsigned char * *in, long len); int i2d_ASN1_GENERALSTRING(ASN1_GENERALSTRING *a, unsigned char * *out); extern const ASN1_ITEM ASN1_GENERALSTRING_it; ASN1_UTCTIME *ASN1_UTCTIME_new(void); void ASN1_UTCTIME_free(ASN1_UTCTIME *a); ASN1_UTCTIME *d2i_ASN1_UTCTIME(ASN1_UTCTIME * *a, const unsigned char * *in, long len); int i2d_ASN1_UTCTIME(ASN1_UTCTIME *a, unsigned char * *out); extern const ASN1_ITEM ASN1_UTCTIME_it; ASN1_GENERALIZEDTIME *ASN1_GENERALIZEDTIME_new(void); void ASN1_GENERALIZEDTIME_free(ASN1_GENERALIZEDTIME *a); ASN1_GENERALIZEDTIME *d2i_ASN1_GENERALIZEDTIME(ASN1_GENERALIZEDTIME * *a, const unsigned char * *in, long len); int i2d_ASN1_GENERALIZEDTIME(ASN1_GENERALIZEDTIME *a, unsigned char * *out); extern const ASN1_ITEM ASN1_GENERALIZEDTIME_it; ASN1_TIME *ASN1_TIME_new(void); void ASN1_TIME_free(ASN1_TIME *a); ASN1_TIME *d2i_ASN1_TIME(ASN1_TIME * *a, const unsigned char * *in, long len); int i2d_ASN1_TIME(ASN1_TIME *a, unsigned char * *out); extern const ASN1_ITEM ASN1_TIME_it; extern const ASN1_ITEM ASN1_OCTET_STRING_NDEF_it; ASN1_TIME *ASN1_TIME_set(ASN1_TIME *s, time_t t); int ASN1_TIME_check(ASN1_TIME *t); ASN1_GENERALIZEDTIME *ASN1_TIME_to_generalizedtime(ASN1_TIME *t, ASN1_GENERALIZEDTIME **out); int i2d_ASN1_SET(STACK * a, unsigned char **pp, i2d_of_void *i2d, int ex_tag, int ex_class, int is_set); STACK *d2i_ASN1_SET(STACK ** a, const unsigned char **pp, long length, d2i_of_void *d2i, void (*free_func) (void *), int ex_tag, int ex_class); int i2a_ASN1_INTEGER(BIO *bp, ASN1_INTEGER *a); int a2i_ASN1_INTEGER(BIO *bp, ASN1_INTEGER *bs, char *buf, int size); int i2a_ASN1_ENUMERATED(BIO *bp, ASN1_ENUMERATED *a); int a2i_ASN1_ENUMERATED(BIO *bp, ASN1_ENUMERATED *bs, char *buf, int size); int i2a_ASN1_OBJECT(BIO *bp, ASN1_OBJECT *a); int a2i_ASN1_STRING(BIO *bp, ASN1_STRING *bs, char *buf, int size); int i2a_ASN1_STRING(BIO *bp, ASN1_STRING *a, int type); int i2t_ASN1_OBJECT(char *buf, int buf_len, ASN1_OBJECT *a); int a2d_ASN1_OBJECT(unsigned char *out, int olen, const char *buf, int num); ASN1_OBJECT *ASN1_OBJECT_create(int nid, unsigned char *data, int len, const char *sn, const char *ln); int ASN1_INTEGER_set(ASN1_INTEGER *a, long v); long ASN1_INTEGER_get(ASN1_INTEGER *a); ASN1_INTEGER *BN_to_ASN1_INTEGER(BIGNUM *bn, ASN1_INTEGER *ai); BIGNUM *ASN1_INTEGER_to_BN(ASN1_INTEGER *ai, BIGNUM *bn); int ASN1_ENUMERATED_set(ASN1_ENUMERATED *a, long v); long ASN1_ENUMERATED_get(ASN1_ENUMERATED *a); ASN1_ENUMERATED *BN_to_ASN1_ENUMERATED(BIGNUM *bn, ASN1_ENUMERATED *ai); BIGNUM *ASN1_ENUMERATED_to_BN(ASN1_ENUMERATED *ai, BIGNUM *bn); int ASN1_PRINTABLE_type(const unsigned char *s, int max); int i2d_ASN1_bytes(ASN1_STRING *a, unsigned char **pp, int tag, int xclass); ASN1_STRING *d2i_ASN1_bytes(ASN1_STRING **a, const unsigned char **pp, long length, int Ptag, int Pclass); unsigned long ASN1_tag2bit(int tag); ASN1_STRING *d2i_ASN1_type_bytes(ASN1_STRING **a, const unsigned char **pp, long length, int type); int asn1_Finish(ASN1_CTX *c); int asn1_const_Finish(ASN1_const_CTX *c); int ASN1_get_object(const unsigned char **pp, long *plength, int *ptag, int *pclass, long omax); int ASN1_check_infinite_end(unsigned char **p, long len); int ASN1_const_check_infinite_end(const unsigned char **p, long len); void ASN1_put_object(unsigned char **pp, int constructed, int length, int tag, int xclass); int ASN1_put_eoc(unsigned char **pp); int ASN1_object_size(int constructed, int length, int tag); void *ASN1_dup(i2d_of_void *i2d, d2i_of_void *d2i, char *x); void *ASN1_item_dup(const ASN1_ITEM *it, void *x); void *ASN1_d2i_fp(void *(*xnew) (void), d2i_of_void *d2i, FILE *in, void **x); void *ASN1_item_d2i_fp(const ASN1_ITEM *it, FILE *in, void *x); int ASN1_i2d_fp(i2d_of_void *i2d, FILE *out, void *x); int ASN1_item_i2d_fp(const ASN1_ITEM *it, FILE *out, void *x); int ASN1_STRING_print_ex_fp(FILE *fp, ASN1_STRING *str, unsigned long flags); int ASN1_STRING_to_UTF8(unsigned char **out, ASN1_STRING *in); void *ASN1_d2i_bio(void *(*xnew) (void), d2i_of_void *d2i, BIO *in, void **x); void *ASN1_item_d2i_bio(const ASN1_ITEM *it, BIO *in, void *x); int ASN1_i2d_bio(i2d_of_void *i2d, BIO *out, unsigned char *x); int ASN1_item_i2d_bio(const ASN1_ITEM *it, BIO *out, void *x); int ASN1_UTCTIME_print(BIO *fp, ASN1_UTCTIME *a); int ASN1_GENERALIZEDTIME_print(BIO *fp, ASN1_GENERALIZEDTIME *a); int ASN1_TIME_print(BIO *fp, ASN1_TIME *a); int ASN1_STRING_print(BIO *bp, ASN1_STRING *v); int ASN1_STRING_print_ex(BIO *out, ASN1_STRING *str, unsigned long flags); int ASN1_parse(BIO *bp, const unsigned char *pp, long len, int indent); int ASN1_parse_dump(BIO *bp, const unsigned char *pp, long len, int indent, int dump); const char *ASN1_tag2str(int tag); int i2d_ASN1_HEADER(ASN1_HEADER * a, unsigned char **pp); ASN1_HEADER *d2i_ASN1_HEADER(ASN1_HEADER ** a, const unsigned char **pp, long length); ASN1_HEADER *ASN1_HEADER_new(void); void ASN1_HEADER_free(ASN1_HEADER * a); int ASN1_UNIVERSALSTRING_to_string(ASN1_UNIVERSALSTRING *s); ASN1_METHOD *X509_asn1_meth(void); ASN1_METHOD *RSAPrivateKey_asn1_meth(void); ASN1_METHOD *ASN1_IA5STRING_asn1_meth(void); ASN1_METHOD *ASN1_BIT_STRING_asn1_meth(void); int ASN1_TYPE_set_octetstring(ASN1_TYPE *a, unsigned char *data, int len); int ASN1_TYPE_get_octetstring(ASN1_TYPE *a, unsigned char *data, int max_len); int ASN1_TYPE_set_int_octetstring(ASN1_TYPE *a, long num, unsigned char *data, int len); int ASN1_TYPE_get_int_octetstring(ASN1_TYPE *a, long *num, unsigned char *data, int max_len); STACK *ASN1_seq_unpack(const unsigned char *buf, int len, d2i_of_void *d2i, void (*free_func) (void *)); unsigned char *ASN1_seq_pack(STACK * safes, i2d_of_void *i2d, unsigned char **buf, int *len); void *ASN1_unpack_string(ASN1_STRING *oct, d2i_of_void *d2i); void *ASN1_item_unpack(ASN1_STRING *oct, const ASN1_ITEM *it); ASN1_STRING *ASN1_pack_string(void *obj, i2d_of_void *i2d, ASN1_OCTET_STRING **oct); ASN1_STRING *ASN1_item_pack(void *obj, const ASN1_ITEM *it, ASN1_OCTET_STRING **oct); void ASN1_STRING_set_default_mask(unsigned long mask); int ASN1_STRING_set_default_mask_asc(const char *p); unsigned long ASN1_STRING_get_default_mask(void); int ASN1_mbstring_copy(ASN1_STRING **out, const unsigned char *in, int len, int inform, unsigned long mask); int ASN1_mbstring_ncopy(ASN1_STRING **out, const unsigned char *in, int len, int inform, unsigned long mask, long minsize, long maxsize); ASN1_STRING *ASN1_STRING_set_by_NID(ASN1_STRING **out, const unsigned char *in, int inlen, int inform, int nid); ASN1_STRING_TABLE *ASN1_STRING_TABLE_get(int nid); int ASN1_STRING_TABLE_add(int, long, long, unsigned long, unsigned long); void ASN1_STRING_TABLE_cleanup(void); ASN1_VALUE *ASN1_item_new(const ASN1_ITEM *it); void ASN1_item_free(ASN1_VALUE *val, const ASN1_ITEM *it); ASN1_VALUE *ASN1_item_d2i(ASN1_VALUE **val, const unsigned char **in, long len, const ASN1_ITEM *it); int ASN1_item_i2d(ASN1_VALUE *val, unsigned char **out, const ASN1_ITEM *it); int ASN1_item_ndef_i2d(ASN1_VALUE *val, unsigned char **out, const ASN1_ITEM *it); void ASN1_add_oid_module(void); ASN1_TYPE *ASN1_generate_nconf(char *str, CONF *nconf); ASN1_TYPE *ASN1_generate_v3(char *str, X509V3_CTX *cnf); typedef int asn1_output_data_fn(BIO *out, BIO *data, ASN1_VALUE *val, int flags, const ASN1_ITEM *it); int int_smime_write_ASN1(BIO *bio, ASN1_VALUE *val, BIO *data, int flags, int ctype_nid, int econt_nid, STACK *mdalgs, asn1_output_data_fn * data_fn, const ASN1_ITEM *it); ASN1_VALUE *SMIME_read_ASN1(BIO *bio, BIO **bcont, const ASN1_ITEM *it); void ERR_load_ASN1_strings(void); #line 1222 "/usr/include/openssl/asn1.h" #line 1339 "/usr/include/openssl/asn1.h" #line 966 "/usr/include/openssl/objects.h" #line 973 "/usr/include/openssl/objects.h" typedef struct obj_name_st { int type; int alias; const char *name; const char *data; } OBJ_NAME; int OBJ_NAME_init(void); int OBJ_NAME_new_index(unsigned long (*hash_func) (const char *), int (*cmp_func) (const char *, const char *), void (*free_func) (const char *, int, const char *)); const char *OBJ_NAME_get(const char *name, int type); int OBJ_NAME_add(const char *name, int type, const char *data); int OBJ_NAME_remove(const char *name, int type); void OBJ_NAME_cleanup(int type); void OBJ_NAME_do_all(int type, void (*fn) (const OBJ_NAME *, void *arg), void *arg); void OBJ_NAME_do_all_sorted(int type, void (*fn) (const OBJ_NAME *, void *arg), void *arg); ASN1_OBJECT *OBJ_dup(const ASN1_OBJECT *o); ASN1_OBJECT *OBJ_nid2obj(int n); const char *OBJ_nid2ln(int n); const char *OBJ_nid2sn(int n); int OBJ_obj2nid(const ASN1_OBJECT *o); ASN1_OBJECT *OBJ_txt2obj(const char *s, int no_name); int OBJ_obj2txt(char *buf, int buf_len, const ASN1_OBJECT *a, int no_name); int OBJ_txt2nid(const char *s); int OBJ_ln2nid(const char *s); int OBJ_sn2nid(const char *s); int OBJ_cmp(const ASN1_OBJECT *a, const ASN1_OBJECT *b); const char *OBJ_bsearch(const char *key, const char *base, int num, int size, int (*cmp) (const void *, const void *)); const char *OBJ_bsearch_ex(const char *key, const char *base, int num, int size, int (*cmp) (const void *, const void *), int flags); int OBJ_new_nid(int num); int OBJ_add_object(const ASN1_OBJECT *obj); int OBJ_create(const char *oid, const char *sn, const char *ln); void OBJ_cleanup(void); int OBJ_create_objects(BIO *in); void ERR_load_OBJ_strings(void); #line 1047 "/usr/include/openssl/objects.h" #line 99 "/usr/include/openssl/evp.h" #line 111 "/usr/include/openssl/evp.h" #line 122 "/usr/include/openssl/evp.h" struct evp_pkey_st { int type; int save_type; int references; union { char *ptr; struct rsa_st *rsa; struct dsa_st *dsa; struct dh_st *dh; } pkey; int save_parameters; STACK *attributes; } ; #line 219 "/usr/include/openssl/evp.h" struct env_md_st { int type; int pkey_type; int md_size; unsigned long flags; int (*init) (EVP_MD_CTX *ctx); int (*update) (EVP_MD_CTX *ctx, const void *data, size_t count); int (*final) (EVP_MD_CTX *ctx, unsigned char *md); int (*copy) (EVP_MD_CTX *to, const EVP_MD_CTX *from); int (*cleanup) (EVP_MD_CTX *ctx); int (*sign) (int type, const unsigned char *m, unsigned int m_length, unsigned char *sigret, unsigned int *siglen, void *key); int (*verify) (int type, const unsigned char *m, unsigned int m_length, const unsigned char *sigbuf, unsigned int siglen, void *key); int required_pkey_type[5]; int block_size; int ctx_size; } ; typedef int evp_sign_method(int type, const unsigned char *m, unsigned int m_length, unsigned char *sigret, unsigned int *siglen, void *key); typedef int evp_verify_method(int type, const unsigned char *m, unsigned int m_length, const unsigned char *sigbuf, unsigned int siglen, void *key); typedef struct { EVP_MD_CTX *mctx; void *key; } EVP_MD_SVCTX; #line 274 "/usr/include/openssl/evp.h" #line 288 "/usr/include/openssl/evp.h" struct env_md_ctx_st { const EVP_MD *digest; ENGINE *engine; unsigned long flags; void *md_data; } ; #line 309 "/usr/include/openssl/evp.h" #line 318 "/usr/include/openssl/evp.h" struct evp_cipher_st { int nid; int block_size; int key_len; int iv_len; unsigned long flags; int (*init) (EVP_CIPHER_CTX *ctx, const unsigned char *key, const unsigned char *iv, int enc); int (*do_cipher) (EVP_CIPHER_CTX *ctx, unsigned char *out, const unsigned char *in, unsigned int inl); int (*cleanup) (EVP_CIPHER_CTX *); int ctx_size; int (*set_asn1_parameters) (EVP_CIPHER_CTX *, ASN1_TYPE *); int (*get_asn1_parameters) (EVP_CIPHER_CTX *, ASN1_TYPE *); int (*ctrl) (EVP_CIPHER_CTX *, int type, int arg, void *ptr); void *app_data; } ; #line 357 "/usr/include/openssl/evp.h" #line 389 "/usr/include/openssl/evp.h" typedef struct evp_cipher_info_st { const EVP_CIPHER *cipher; unsigned char iv[16]; } EVP_CIPHER_INFO; struct evp_cipher_ctx_st { const EVP_CIPHER *cipher; ENGINE *engine; int encrypt; int buf_len; unsigned char oiv[16]; unsigned char iv[16]; unsigned char buf[32]; int num; void *app_data; int key_len; unsigned long flags; void *cipher_data; int final_used; int block_mask; unsigned char final[32]; } ; typedef struct evp_Encode_Ctx_st { int num; int length; unsigned char enc_data[80]; int line_num; int expect_nl; } EVP_ENCODE_CTX; typedef int (EVP_PBE_KEYGEN) (EVP_CIPHER_CTX *ctx, const char *pass, int passlen, ASN1_TYPE *param, const EVP_CIPHER *cipher, const EVP_MD *md, int en_de); #line 467 "/usr/include/openssl/evp.h" int EVP_MD_type(const EVP_MD *md); int EVP_MD_pkey_type(const EVP_MD *md); int EVP_MD_size(const EVP_MD *md); int EVP_MD_block_size(const EVP_MD *md); const EVP_MD *EVP_MD_CTX_md(const EVP_MD_CTX *ctx); int EVP_CIPHER_nid(const EVP_CIPHER *cipher); int EVP_CIPHER_block_size(const EVP_CIPHER *cipher); int EVP_CIPHER_key_length(const EVP_CIPHER *cipher); int EVP_CIPHER_iv_length(const EVP_CIPHER *cipher); unsigned long EVP_CIPHER_flags(const EVP_CIPHER *cipher); const EVP_CIPHER *EVP_CIPHER_CTX_cipher(const EVP_CIPHER_CTX *ctx); int EVP_CIPHER_CTX_nid(const EVP_CIPHER_CTX *ctx); int EVP_CIPHER_CTX_block_size(const EVP_CIPHER_CTX *ctx); int EVP_CIPHER_CTX_key_length(const EVP_CIPHER_CTX *ctx); int EVP_CIPHER_CTX_iv_length(const EVP_CIPHER_CTX *ctx); void *EVP_CIPHER_CTX_get_app_data(const EVP_CIPHER_CTX *ctx); void EVP_CIPHER_CTX_set_app_data(EVP_CIPHER_CTX *ctx, void *data); unsigned long EVP_CIPHER_CTX_flags(const EVP_CIPHER_CTX *ctx); #line 512 "/usr/include/openssl/evp.h" #line 523 "/usr/include/openssl/evp.h" int EVP_Cipher(EVP_CIPHER_CTX *c, unsigned char *out, const unsigned char *in, unsigned int inl); #line 535 "/usr/include/openssl/evp.h" void EVP_MD_CTX_init(EVP_MD_CTX *ctx); int EVP_MD_CTX_cleanup(EVP_MD_CTX *ctx); EVP_MD_CTX *EVP_MD_CTX_create(void); void EVP_MD_CTX_destroy(EVP_MD_CTX *ctx); int EVP_MD_CTX_copy_ex(EVP_MD_CTX *out, const EVP_MD_CTX *in); void EVP_MD_CTX_set_flags(EVP_MD_CTX *ctx, int flags); void EVP_MD_CTX_clear_flags(EVP_MD_CTX *ctx, int flags); int EVP_MD_CTX_test_flags(const EVP_MD_CTX *ctx, int flags); int EVP_DigestInit_ex(EVP_MD_CTX *ctx, const EVP_MD *type, ENGINE *impl); int EVP_DigestUpdate(EVP_MD_CTX *ctx, const void *d, size_t cnt); int EVP_DigestFinal_ex(EVP_MD_CTX *ctx, unsigned char *md, unsigned int *s); int EVP_Digest(const void *data, size_t count, unsigned char *md, unsigned int *size, const EVP_MD *type, ENGINE *impl); int EVP_MD_CTX_copy(EVP_MD_CTX *out, const EVP_MD_CTX *in); int EVP_DigestInit(EVP_MD_CTX *ctx, const EVP_MD *type); int EVP_DigestFinal(EVP_MD_CTX *ctx, unsigned char *md, unsigned int *s); int EVP_read_pw_string(char *buf, int length, const char *prompt, int verify); void EVP_set_pw_prompt(const char *prompt); char *EVP_get_pw_prompt(void); int EVP_BytesToKey(const EVP_CIPHER *type, const EVP_MD *md, const unsigned char *salt, const unsigned char *data, int datal, int count, unsigned char *key, unsigned char *iv); void EVP_CIPHER_CTX_set_flags(EVP_CIPHER_CTX *ctx, int flags); void EVP_CIPHER_CTX_clear_flags(EVP_CIPHER_CTX *ctx, int flags); int EVP_CIPHER_CTX_test_flags(const EVP_CIPHER_CTX *ctx, int flags); int EVP_EncryptInit(EVP_CIPHER_CTX *ctx, const EVP_CIPHER *cipher, const unsigned char *key, const unsigned char *iv); int EVP_EncryptInit_ex(EVP_CIPHER_CTX *ctx, const EVP_CIPHER *cipher, ENGINE *impl, const unsigned char *key, const unsigned char *iv); int EVP_EncryptUpdate(EVP_CIPHER_CTX *ctx, unsigned char *out, int *outl, const unsigned char *in, int inl); int EVP_EncryptFinal_ex(EVP_CIPHER_CTX *ctx, unsigned char *out, int *outl); int EVP_EncryptFinal(EVP_CIPHER_CTX *ctx, unsigned char *out, int *outl); int EVP_DecryptInit(EVP_CIPHER_CTX *ctx, const EVP_CIPHER *cipher, const unsigned char *key, const unsigned char *iv); int EVP_DecryptInit_ex(EVP_CIPHER_CTX *ctx, const EVP_CIPHER *cipher, ENGINE *impl, const unsigned char *key, const unsigned char *iv); int EVP_DecryptUpdate(EVP_CIPHER_CTX *ctx, unsigned char *out, int *outl, const unsigned char *in, int inl); int EVP_DecryptFinal(EVP_CIPHER_CTX *ctx, unsigned char *outm, int *outl); int EVP_DecryptFinal_ex(EVP_CIPHER_CTX *ctx, unsigned char *outm, int *outl); int EVP_CipherInit(EVP_CIPHER_CTX *ctx, const EVP_CIPHER *cipher, const unsigned char *key, const unsigned char *iv, int enc); int EVP_CipherInit_ex(EVP_CIPHER_CTX *ctx, const EVP_CIPHER *cipher, ENGINE *impl, const unsigned char *key, const unsigned char *iv, int enc); int EVP_CipherUpdate(EVP_CIPHER_CTX *ctx, unsigned char *out, int *outl, const unsigned char *in, int inl); int EVP_CipherFinal(EVP_CIPHER_CTX *ctx, unsigned char *outm, int *outl); int EVP_CipherFinal_ex(EVP_CIPHER_CTX *ctx, unsigned char *outm, int *outl); int EVP_SignFinal(EVP_MD_CTX *ctx, unsigned char *md, unsigned int *s, EVP_PKEY *pkey); int EVP_VerifyFinal(EVP_MD_CTX *ctx, const unsigned char *sigbuf, unsigned int siglen, EVP_PKEY *pkey); int EVP_OpenInit(EVP_CIPHER_CTX *ctx, const EVP_CIPHER *type, const unsigned char *ek, int ekl, const unsigned char *iv, EVP_PKEY *priv); int EVP_OpenFinal(EVP_CIPHER_CTX *ctx, unsigned char *out, int *outl); int EVP_SealInit(EVP_CIPHER_CTX *ctx, const EVP_CIPHER *type, unsigned char **ek, int *ekl, unsigned char *iv, EVP_PKEY **pubk, int npubk); int EVP_SealFinal(EVP_CIPHER_CTX *ctx, unsigned char *out, int *outl); void EVP_EncodeInit(EVP_ENCODE_CTX *ctx); void EVP_EncodeUpdate(EVP_ENCODE_CTX *ctx, unsigned char *out, int *outl, const unsigned char *in, int inl); void EVP_EncodeFinal(EVP_ENCODE_CTX *ctx, unsigned char *out, int *outl); int EVP_EncodeBlock(unsigned char *t, const unsigned char *f, int n); void EVP_DecodeInit(EVP_ENCODE_CTX *ctx); int EVP_DecodeUpdate(EVP_ENCODE_CTX *ctx, unsigned char *out, int *outl, const unsigned char *in, int inl); int EVP_DecodeFinal(EVP_ENCODE_CTX *ctx, unsigned char *out, int *outl); int EVP_DecodeBlock(unsigned char *t, const unsigned char *f, int n); void EVP_CIPHER_CTX_init(EVP_CIPHER_CTX *a); int EVP_CIPHER_CTX_cleanup(EVP_CIPHER_CTX *a); EVP_CIPHER_CTX *EVP_CIPHER_CTX_new(void); void EVP_CIPHER_CTX_free(EVP_CIPHER_CTX *a); int EVP_CIPHER_CTX_set_key_length(EVP_CIPHER_CTX *x, int keylen); int EVP_CIPHER_CTX_set_padding(EVP_CIPHER_CTX *c, int pad); int EVP_CIPHER_CTX_ctrl(EVP_CIPHER_CTX *ctx, int type, int arg, void *ptr); int EVP_CIPHER_CTX_rand_key(EVP_CIPHER_CTX *ctx, unsigned char *key); BIO_METHOD *BIO_f_md(void); BIO_METHOD *BIO_f_base64(void); BIO_METHOD *BIO_f_cipher(void); BIO_METHOD *BIO_f_reliable(void); void BIO_set_cipher(BIO *b, const EVP_CIPHER *c, const unsigned char *k, const unsigned char *i, int enc); const EVP_MD *EVP_md_null(void); const EVP_MD *EVP_md2(void); const EVP_MD *EVP_md4(void); const EVP_MD *EVP_md5(void); const EVP_MD *EVP_sha(void); const EVP_MD *EVP_sha1(void); const EVP_MD *EVP_dss(void); const EVP_MD *EVP_dss1(void); const EVP_MD *EVP_ecdsa(void); const EVP_MD *EVP_sha224(void); const EVP_MD *EVP_sha256(void); const EVP_MD *EVP_sha384(void); const EVP_MD *EVP_sha512(void); const EVP_MD *EVP_ripemd160(void); const EVP_CIPHER *EVP_enc_null(void); const EVP_CIPHER *EVP_des_ecb(void); const EVP_CIPHER *EVP_des_ede(void); const EVP_CIPHER *EVP_des_ede3(void); const EVP_CIPHER *EVP_des_ede_ecb(void); const EVP_CIPHER *EVP_des_ede3_ecb(void); const EVP_CIPHER *EVP_des_cfb64(void); const EVP_CIPHER *EVP_des_cfb1(void); const EVP_CIPHER *EVP_des_cfb8(void); const EVP_CIPHER *EVP_des_ede_cfb64(void); const EVP_CIPHER *EVP_des_ede3_cfb64(void); const EVP_CIPHER *EVP_des_ede3_cfb1(void); const EVP_CIPHER *EVP_des_ede3_cfb8(void); const EVP_CIPHER *EVP_des_ofb(void); const EVP_CIPHER *EVP_des_ede_ofb(void); const EVP_CIPHER *EVP_des_ede3_ofb(void); const EVP_CIPHER *EVP_des_cbc(void); const EVP_CIPHER *EVP_des_ede_cbc(void); const EVP_CIPHER *EVP_des_ede3_cbc(void); const EVP_CIPHER *EVP_desx_cbc(void); #line 716 "/usr/include/openssl/evp.h" const EVP_CIPHER *EVP_rc4(void); const EVP_CIPHER *EVP_rc4_40(void); const EVP_CIPHER *EVP_rc2_ecb(void); const EVP_CIPHER *EVP_rc2_cbc(void); const EVP_CIPHER *EVP_rc2_40_cbc(void); const EVP_CIPHER *EVP_rc2_64_cbc(void); const EVP_CIPHER *EVP_rc2_cfb64(void); const EVP_CIPHER *EVP_rc2_ofb(void); const EVP_CIPHER *EVP_bf_ecb(void); const EVP_CIPHER *EVP_bf_cbc(void); const EVP_CIPHER *EVP_bf_cfb64(void); const EVP_CIPHER *EVP_bf_ofb(void); const EVP_CIPHER *EVP_cast5_ecb(void); const EVP_CIPHER *EVP_cast5_cbc(void); const EVP_CIPHER *EVP_cast5_cfb64(void); const EVP_CIPHER *EVP_cast5_ofb(void); const EVP_CIPHER *EVP_aes_128_ecb(void); const EVP_CIPHER *EVP_aes_128_cbc(void); const EVP_CIPHER *EVP_aes_128_cfb1(void); const EVP_CIPHER *EVP_aes_128_cfb8(void); const EVP_CIPHER *EVP_aes_128_cfb128(void); const EVP_CIPHER *EVP_aes_128_ofb(void); const EVP_CIPHER *EVP_aes_192_ecb(void); const EVP_CIPHER *EVP_aes_192_cbc(void); const EVP_CIPHER *EVP_aes_192_cfb1(void); const EVP_CIPHER *EVP_aes_192_cfb8(void); const EVP_CIPHER *EVP_aes_192_cfb128(void); const EVP_CIPHER *EVP_aes_192_ofb(void); const EVP_CIPHER *EVP_aes_256_ecb(void); const EVP_CIPHER *EVP_aes_256_cbc(void); const EVP_CIPHER *EVP_aes_256_cfb1(void); const EVP_CIPHER *EVP_aes_256_cfb8(void); const EVP_CIPHER *EVP_aes_256_cfb128(void); const EVP_CIPHER *EVP_aes_256_ofb(void); #line 797 "/usr/include/openssl/evp.h" #line 805 "/usr/include/openssl/evp.h" void OPENSSL_add_all_algorithms_noconf(void); void OPENSSL_add_all_algorithms_conf(void); #line 816 "/usr/include/openssl/evp.h" void OpenSSL_add_all_ciphers(void); void OpenSSL_add_all_digests(void); int EVP_add_cipher(const EVP_CIPHER *cipher); int EVP_add_digest(const EVP_MD *digest); const EVP_CIPHER *EVP_get_cipherbyname(const char *name); const EVP_MD *EVP_get_digestbyname(const char *name); void EVP_cleanup(void); int EVP_PKEY_decrypt(unsigned char *dec_key, const unsigned char *enc_key, int enc_key_len, EVP_PKEY *private_key); int EVP_PKEY_encrypt(unsigned char *enc_key, const unsigned char *key, int key_len, EVP_PKEY *pub_key); int EVP_PKEY_type(int type); int EVP_PKEY_bits(EVP_PKEY *pkey); int EVP_PKEY_size(EVP_PKEY *pkey); int EVP_PKEY_assign(EVP_PKEY *pkey, int type, char *key); struct rsa_st; int EVP_PKEY_set1_RSA(EVP_PKEY *pkey, struct rsa_st *key); struct rsa_st *EVP_PKEY_get1_RSA(EVP_PKEY *pkey); struct dsa_st; int EVP_PKEY_set1_DSA(EVP_PKEY *pkey, struct dsa_st *key); struct dsa_st *EVP_PKEY_get1_DSA(EVP_PKEY *pkey); struct dh_st; int EVP_PKEY_set1_DH(EVP_PKEY *pkey, struct dh_st *key); struct dh_st *EVP_PKEY_get1_DH(EVP_PKEY *pkey); EVP_PKEY *EVP_PKEY_new(void); void EVP_PKEY_free(EVP_PKEY *pkey); EVP_PKEY *d2i_PublicKey(int type, EVP_PKEY **a, const unsigned char **pp, long length); int i2d_PublicKey(EVP_PKEY *a, unsigned char **pp); EVP_PKEY *d2i_PrivateKey(int type, EVP_PKEY **a, const unsigned char **pp, long length); EVP_PKEY *d2i_AutoPrivateKey(EVP_PKEY **a, const unsigned char **pp, long length); int i2d_PrivateKey(EVP_PKEY *a, unsigned char **pp); int EVP_PKEY_copy_parameters(EVP_PKEY *to, const EVP_PKEY *from); int EVP_PKEY_missing_parameters(const EVP_PKEY *pkey); int EVP_PKEY_save_parameters(EVP_PKEY *pkey, int mode); int EVP_PKEY_cmp_parameters(const EVP_PKEY *a, const EVP_PKEY *b); int EVP_PKEY_cmp(const EVP_PKEY *a, const EVP_PKEY *b); int EVP_CIPHER_type(const EVP_CIPHER *ctx); int EVP_CIPHER_param_to_asn1(EVP_CIPHER_CTX *c, ASN1_TYPE *type); int EVP_CIPHER_asn1_to_param(EVP_CIPHER_CTX *c, ASN1_TYPE *type); int EVP_CIPHER_set_asn1_iv(EVP_CIPHER_CTX *c, ASN1_TYPE *type); int EVP_CIPHER_get_asn1_iv(EVP_CIPHER_CTX *c, ASN1_TYPE *type); int PKCS5_PBE_keyivgen(EVP_CIPHER_CTX *ctx, const char *pass, int passlen, ASN1_TYPE *param, const EVP_CIPHER *cipher, const EVP_MD *md, int en_de); int PKCS5_PBKDF2_HMAC_SHA1(const char *pass, int passlen, const unsigned char *salt, int saltlen, int iter, int keylen, unsigned char *out); int PKCS5_v2_PBE_keyivgen(EVP_CIPHER_CTX *ctx, const char *pass, int passlen, ASN1_TYPE *param, const EVP_CIPHER *cipher, const EVP_MD *md, int en_de); void PKCS5_PBE_add(void); int EVP_PBE_CipherInit(ASN1_OBJECT *pbe_obj, const char *pass, int passlen, ASN1_TYPE *param, EVP_CIPHER_CTX *ctx, int en_de); int EVP_PBE_alg_add(int nid, const EVP_CIPHER *cipher, const EVP_MD *md, EVP_PBE_KEYGEN *keygen); void EVP_PBE_cleanup(void); #line 922 "/usr/include/openssl/evp.h" void EVP_add_alg_module(void); void ERR_load_EVP_strings(void); #line 978 "/usr/include/openssl/evp.h" #line 1032 "/usr/include/openssl/evp.h" #line 74 "/usr/include/openssl/x509.h" #line 81 "/usr/include/openssl/x509.h" #line 1 "/usr/include/openssl/rsa.h" #line 72 "/usr/include/openssl/rsa.h" struct rsa_meth_st { const char *name; int (*rsa_pub_enc) (int flen, const unsigned char *from, unsigned char *to, RSA *rsa, int padding); int (*rsa_pub_dec) (int flen, const unsigned char *from, unsigned char *to, RSA *rsa, int padding); int (*rsa_priv_enc) (int flen, const unsigned char *from, unsigned char *to, RSA *rsa, int padding); int (*rsa_priv_dec) (int flen, const unsigned char *from, unsigned char *to, RSA *rsa, int padding); int (*rsa_mod_exp) (BIGNUM *r0, const BIGNUM *I, RSA *rsa, BN_CTX *ctx); int (*bn_mod_exp) (BIGNUM *r, const BIGNUM *a, const BIGNUM *p, const BIGNUM *m, BN_CTX *ctx, BN_MONT_CTX *m_ctx); int (*init) (RSA *rsa); int (*finish) (RSA *rsa); int flags; char *app_data; int (*rsa_sign) (int type, const unsigned char *m, unsigned int m_length, unsigned char *sigret, unsigned int *siglen, const RSA *rsa); int (*rsa_verify) (int dtype, const unsigned char *m, unsigned int m_length, unsigned char *sigbuf, unsigned int siglen, const RSA *rsa); int (*rsa_keygen) (RSA *rsa, int bits, BIGNUM *e, BN_GENCB *cb); }; struct rsa_st { int pad; long version; const RSA_METHOD *meth; ENGINE *engine; BIGNUM *n; BIGNUM *e; BIGNUM *d; BIGNUM *p; BIGNUM *q; BIGNUM *dmp1; BIGNUM *dmq1; BIGNUM *iqmp; CRYPTO_EX_DATA ex_data; int references; int flags; BN_MONT_CTX *_method_mod_n; BN_MONT_CTX *_method_mod_p; BN_MONT_CTX *_method_mod_q; char *bignum_data; BN_BLINDING *blinding; BN_BLINDING *mt_blinding; }; #line 258 "/usr/include/openssl/rsa.h" RSA *RSA_new(void); RSA *RSA_new_method(ENGINE *engine); int RSA_size(const RSA *); RSA *RSA_generate_key(int bits, unsigned long e, void (*callback) (int, int, void *), void *cb_arg); int RSA_generate_key_ex(RSA *rsa, int bits, BIGNUM *e, BN_GENCB *cb); int RSA_X931_derive_ex(RSA *rsa, BIGNUM *p1, BIGNUM *p2, BIGNUM *q1, BIGNUM *q2, const BIGNUM *Xp1, const BIGNUM *Xp2, const BIGNUM *Xp, const BIGNUM *Xq1, const BIGNUM *Xq2, const BIGNUM *Xq, const BIGNUM *e, BN_GENCB *cb); int RSA_X931_generate_key_ex(RSA *rsa, int bits, const BIGNUM *e, BN_GENCB *cb); int RSA_check_key(const RSA *); int RSA_public_encrypt(int flen, const unsigned char *from, unsigned char *to, RSA *rsa, int padding); int RSA_private_encrypt(int flen, const unsigned char *from, unsigned char *to, RSA *rsa, int padding); int RSA_public_decrypt(int flen, const unsigned char *from, unsigned char *to, RSA *rsa, int padding); int RSA_private_decrypt(int flen, const unsigned char *from, unsigned char *to, RSA *rsa, int padding); void RSA_free(RSA *r); int RSA_up_ref(RSA *r); int RSA_flags(const RSA *r); void RSA_set_default_method(const RSA_METHOD *meth); const RSA_METHOD *RSA_get_default_method(void); const RSA_METHOD *RSA_get_method(const RSA *rsa); int RSA_set_method(RSA *rsa, const RSA_METHOD *meth); int RSA_memory_lock(RSA *r); const RSA_METHOD *RSA_PKCS1_SSLeay(void); const RSA_METHOD *RSA_null_method(void); RSA *d2i_RSAPublicKey(RSA * *a, const unsigned char * *in, long len); int i2d_RSAPublicKey(const RSA *a, unsigned char * *out); extern const ASN1_ITEM RSAPublicKey_it; RSA *d2i_RSAPrivateKey(RSA * *a, const unsigned char * *in, long len); int i2d_RSAPrivateKey(const RSA *a, unsigned char * *out); extern const ASN1_ITEM RSAPrivateKey_it; int RSA_print_fp(FILE *fp, const RSA *r, int offset); int RSA_print(BIO *bp, const RSA *r, int offset); int i2d_RSA_NET(const RSA *a, unsigned char **pp, int (*cb) (char *buf, int len, const char *prompt, int verify), int sgckey); RSA *d2i_RSA_NET(RSA **a, const unsigned char **pp, long length, int (*cb) (char *buf, int len, const char *prompt, int verify), int sgckey); int i2d_Netscape_RSA(const RSA *a, unsigned char **pp, int (*cb) (char *buf, int len, const char *prompt, int verify)); RSA *d2i_Netscape_RSA(RSA **a, const unsigned char **pp, long length, int (*cb) (char *buf, int len, const char *prompt, int verify)); int RSA_sign(int type, const unsigned char *m, unsigned int m_length, unsigned char *sigret, unsigned int *siglen, RSA *rsa); int RSA_verify(int type, const unsigned char *m, unsigned int m_length, unsigned char *sigbuf, unsigned int siglen, RSA *rsa); int RSA_sign_ASN1_OCTET_STRING(int type, const unsigned char *m, unsigned int m_length, unsigned char *sigret, unsigned int *siglen, RSA *rsa); int RSA_verify_ASN1_OCTET_STRING(int type, const unsigned char *m, unsigned int m_length, unsigned char *sigbuf, unsigned int siglen, RSA *rsa); int RSA_blinding_on(RSA *rsa, BN_CTX *ctx); void RSA_blinding_off(RSA *rsa); BN_BLINDING *RSA_setup_blinding(RSA *rsa, BN_CTX *ctx); int RSA_padding_add_PKCS1_type_1(unsigned char *to, int tlen, const unsigned char *f, int fl); int RSA_padding_check_PKCS1_type_1(unsigned char *to, int tlen, const unsigned char *f, int fl, int rsa_len); int RSA_padding_add_PKCS1_type_2(unsigned char *to, int tlen, const unsigned char *f, int fl); int RSA_padding_check_PKCS1_type_2(unsigned char *to, int tlen, const unsigned char *f, int fl, int rsa_len); int PKCS1_MGF1(unsigned char *mask, long len, const unsigned char *seed, long seedlen, const EVP_MD *dgst); int RSA_padding_add_PKCS1_OAEP(unsigned char *to, int tlen, const unsigned char *f, int fl, const unsigned char *p, int pl); int RSA_padding_check_PKCS1_OAEP(unsigned char *to, int tlen, const unsigned char *f, int fl, int rsa_len, const unsigned char *p, int pl); int RSA_padding_add_SSLv23(unsigned char *to, int tlen, const unsigned char *f, int fl); int RSA_padding_check_SSLv23(unsigned char *to, int tlen, const unsigned char *f, int fl, int rsa_len); int RSA_padding_add_none(unsigned char *to, int tlen, const unsigned char *f, int fl); int RSA_padding_check_none(unsigned char *to, int tlen, const unsigned char *f, int fl, int rsa_len); int RSA_padding_add_X931(unsigned char *to, int tlen, const unsigned char *f, int fl); int RSA_padding_check_X931(unsigned char *to, int tlen, const unsigned char *f, int fl, int rsa_len); int RSA_X931_hash_id(int nid); int RSA_verify_PKCS1_PSS(RSA *rsa, const unsigned char *mHash, const EVP_MD *Hash, const unsigned char *EM, int sLen); int RSA_padding_add_PKCS1_PSS(RSA *rsa, unsigned char *EM, const unsigned char *mHash, const EVP_MD *Hash, int sLen); int RSA_get_ex_new_index(long argl, void *argp, CRYPTO_EX_new *new_func, CRYPTO_EX_dup *dup_func, CRYPTO_EX_free *free_func); int RSA_set_ex_data(RSA *r, int idx, void *arg); void *RSA_get_ex_data(const RSA *r, int idx); RSA *RSAPublicKey_dup(RSA *rsa); RSA *RSAPrivateKey_dup(RSA *rsa); void ERR_load_RSA_strings(void); #line 475 "/usr/include/openssl/rsa.h" #line 521 "/usr/include/openssl/rsa.h" #line 88 "/usr/include/openssl/x509.h" #line 1 "/usr/include/openssl/dsa.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 69 "/usr/include/openssl/dsa.h" #line 1 "/usr/include/openssl/dh.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 63 "/usr/include/openssl/dh.h" #line 75 "/usr/include/openssl/dh.h" struct dh_method { const char *name; int (*generate_key) (DH *dh); int (*compute_key) (unsigned char *key, const BIGNUM *pub_key, DH *dh); int (*bn_mod_exp) (const DH *dh, BIGNUM *r, const BIGNUM *a, const BIGNUM *p, const BIGNUM *m, BN_CTX *ctx, BN_MONT_CTX *m_ctx); int (*init) (DH *dh); int (*finish) (DH *dh); int flags; char *app_data; int (*generate_params) (DH *dh, int prime_len, int generator, BN_GENCB *cb); }; struct dh_st { int pad; int version; BIGNUM *p; BIGNUM *g; long length; BIGNUM *pub_key; BIGNUM *priv_key; int flags; BN_MONT_CTX *method_mont_p; BIGNUM *q; BIGNUM *j; unsigned char *seed; int seedlen; BIGNUM *counter; int references; CRYPTO_EX_DATA ex_data; const DH_METHOD *meth; ENGINE *engine; }; #line 173 "/usr/include/openssl/dh.h" const DH_METHOD *DH_OpenSSL(void); void DH_set_default_method(const DH_METHOD *meth); const DH_METHOD *DH_get_default_method(void); int DH_set_method(DH *dh, const DH_METHOD *meth); DH *DH_new_method(ENGINE *engine); DH *DH_new(void); void DH_free(DH *dh); int DH_up_ref(DH *dh); int DH_size(const DH *dh); int DH_get_ex_new_index(long argl, void *argp, CRYPTO_EX_new *new_func, CRYPTO_EX_dup *dup_func, CRYPTO_EX_free *free_func); int DH_set_ex_data(DH *d, int idx, void *arg); void *DH_get_ex_data(DH *d, int idx); DH *DH_generate_parameters(int prime_len, int generator, void (*callback) (int, int, void *), void *cb_arg); int DH_generate_parameters_ex(DH *dh, int prime_len, int generator, BN_GENCB *cb); int DH_check(const DH *dh, int *codes); int DH_check_pub_key(const DH *dh, const BIGNUM *pub_key, int *codes); int DH_generate_key(DH *dh); int DH_compute_key(unsigned char *key, const BIGNUM *pub_key, DH *dh); DH *d2i_DHparams(DH **a, const unsigned char **pp, long length); int i2d_DHparams(const DH *a, unsigned char **pp); int DHparams_print_fp(FILE *fp, const DH *x); int DHparams_print(BIO *bp, const DH *x); void ERR_load_DH_strings(void); #line 240 "/usr/include/openssl/dh.h" #line 84 "/usr/include/openssl/dsa.h" typedef struct DSA_SIG_st { BIGNUM *r; BIGNUM *s; } DSA_SIG; struct dsa_method { const char *name; DSA_SIG *(*dsa_do_sign) (const unsigned char *dgst, int dlen, DSA *dsa); int (*dsa_sign_setup) (DSA *dsa, BN_CTX *ctx_in, BIGNUM **kinvp, BIGNUM **rp); int (*dsa_do_verify) (const unsigned char *dgst, int dgst_len, DSA_SIG *sig, DSA *dsa); int (*dsa_mod_exp) (DSA *dsa, BIGNUM *rr, BIGNUM *a1, BIGNUM *p1, BIGNUM *a2, BIGNUM *p2, BIGNUM *m, BN_CTX *ctx, BN_MONT_CTX *in_mont); int (*bn_mod_exp) (DSA *dsa, BIGNUM *r, BIGNUM *a, const BIGNUM *p, const BIGNUM *m, BN_CTX *ctx, BN_MONT_CTX *m_ctx); int (*init) (DSA *dsa); int (*finish) (DSA *dsa); int flags; char *app_data; int (*dsa_paramgen) (DSA *dsa, int bits, unsigned char *seed, int seed_len, int *counter_ret, unsigned long *h_ret, BN_GENCB *cb); int (*dsa_keygen) (DSA *dsa); }; struct dsa_st { int pad; long version; int write_params; BIGNUM *p; BIGNUM *q; BIGNUM *g; BIGNUM *pub_key; BIGNUM *priv_key; BIGNUM *kinv; BIGNUM *r; int flags; BN_MONT_CTX *method_mont_p; int references; CRYPTO_EX_DATA ex_data; const DSA_METHOD *meth; ENGINE *engine; }; #line 193 "/usr/include/openssl/dsa.h" DSA_SIG *DSA_SIG_new(void); void DSA_SIG_free(DSA_SIG *a); int i2d_DSA_SIG(const DSA_SIG *a, unsigned char **pp); DSA_SIG *d2i_DSA_SIG(DSA_SIG **v, const unsigned char **pp, long length); DSA_SIG *DSA_do_sign(const unsigned char *dgst, int dlen, DSA *dsa); int DSA_do_verify(const unsigned char *dgst, int dgst_len, DSA_SIG *sig, DSA *dsa); const DSA_METHOD *DSA_OpenSSL(void); void DSA_set_default_method(const DSA_METHOD *); const DSA_METHOD *DSA_get_default_method(void); int DSA_set_method(DSA *dsa, const DSA_METHOD *); DSA *DSA_new(void); DSA *DSA_new_method(ENGINE *engine); void DSA_free(DSA *r); int DSA_up_ref(DSA *r); int DSA_size(const DSA *); int DSA_sign_setup(DSA *dsa, BN_CTX *ctx_in, BIGNUM **kinvp, BIGNUM **rp); int DSA_sign(int type, const unsigned char *dgst, int dlen, unsigned char *sig, unsigned int *siglen, DSA *dsa); int DSA_verify(int type, const unsigned char *dgst, int dgst_len, const unsigned char *sigbuf, int siglen, DSA *dsa); int DSA_get_ex_new_index(long argl, void *argp, CRYPTO_EX_new *new_func, CRYPTO_EX_dup *dup_func, CRYPTO_EX_free *free_func); int DSA_set_ex_data(DSA *d, int idx, void *arg); void *DSA_get_ex_data(DSA *d, int idx); DSA *d2i_DSAPublicKey(DSA **a, const unsigned char **pp, long length); DSA *d2i_DSAPrivateKey(DSA **a, const unsigned char **pp, long length); DSA *d2i_DSAparams(DSA **a, const unsigned char **pp, long length); DSA *DSA_generate_parameters(int bits, unsigned char *seed, int seed_len, int *counter_ret, unsigned long *h_ret, void (*callback) (int, int, void *), void *cb_arg); int DSA_generate_parameters_ex(DSA *dsa, int bits, unsigned char *seed, int seed_len, int *counter_ret, unsigned long *h_ret, BN_GENCB *cb); int DSA_generate_key(DSA *a); int i2d_DSAPublicKey(const DSA *a, unsigned char **pp); int i2d_DSAPrivateKey(const DSA *a, unsigned char **pp); int i2d_DSAparams(const DSA *a, unsigned char **pp); int DSAparams_print(BIO *bp, const DSA *x); int DSA_print(BIO *bp, const DSA *x, int off); int DSAparams_print_fp(FILE *fp, const DSA *x); int DSA_print_fp(FILE *bp, const DSA *x, int off); DH *DSA_dup_DH(const DSA *r); void ERR_load_DSA_strings(void); #line 313 "/usr/include/openssl/dsa.h" #line 322 "/usr/include/openssl/dsa.h" #line 91 "/usr/include/openssl/x509.h" #line 1 "/usr/include/openssl/sha.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 63 "/usr/include/openssl/sha.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "/usr/include/openssl/sha.h" #line 92 "/usr/include/openssl/sha.h" #line 99 "/usr/include/openssl/sha.h" typedef struct SHAstate_st { unsigned int h0, h1, h2, h3, h4; unsigned int Nl, Nh; unsigned int data[16]; unsigned int num; } SHA_CTX; int SHA_Init(SHA_CTX *c); int SHA_Update(SHA_CTX *c, const void *data, size_t len); int SHA_Final(unsigned char *md, SHA_CTX *c); unsigned char *SHA(const unsigned char *d, size_t n, unsigned char *md); void SHA_Transform(SHA_CTX *c, const unsigned char *data); int SHA1_Init(SHA_CTX *c); int SHA1_Update(SHA_CTX *c, const void *data, size_t len); int SHA1_Final(unsigned char *md, SHA_CTX *c); unsigned char *SHA1(const unsigned char *d, size_t n, unsigned char *md); void SHA1_Transform(SHA_CTX *c, const unsigned char *data); typedef struct SHA256state_st { unsigned int h[8]; unsigned int Nl, Nh; unsigned int data[16]; unsigned int num, md_len; } SHA256_CTX; int SHA224_Init(SHA256_CTX *c); int SHA224_Update(SHA256_CTX *c, const void *data, size_t len); int SHA224_Final(unsigned char *md, SHA256_CTX *c); unsigned char *SHA224(const unsigned char *d, size_t n, unsigned char *md); int SHA256_Init(SHA256_CTX *c); int SHA256_Update(SHA256_CTX *c, const void *data, size_t len); int SHA256_Final(unsigned char *md, SHA256_CTX *c); unsigned char *SHA256(const unsigned char *d, size_t n, unsigned char *md); void SHA256_Transform(SHA256_CTX *c, const unsigned char *data); #line 175 "/usr/include/openssl/sha.h" typedef struct SHA512state_st { unsigned long h[8]; unsigned long Nl, Nh; union { unsigned long d[16]; unsigned char p[(16*8)]; } u; unsigned int num, md_len; } SHA512_CTX; int SHA384_Init(SHA512_CTX *c); int SHA384_Update(SHA512_CTX *c, const void *data, size_t len); int SHA384_Final(unsigned char *md, SHA512_CTX *c); unsigned char *SHA384(const unsigned char *d, size_t n, unsigned char *md); int SHA512_Init(SHA512_CTX *c); int SHA512_Update(SHA512_CTX *c, const void *data, size_t len); int SHA512_Final(unsigned char *md, SHA512_CTX *c); unsigned char *SHA512(const unsigned char *d, size_t n, unsigned char *md); void SHA512_Transform(SHA512_CTX *c, const unsigned char *data); #line 99 "/usr/include/openssl/x509.h" #line 112 "/usr/include/openssl/x509.h" #line 127 "/usr/include/openssl/x509.h" typedef struct X509_objects_st { int nid; int (*a2i) (void); int (*i2a) (void); } X509_OBJECTS; struct X509_algor_st { ASN1_OBJECT *algorithm; ASN1_TYPE *parameter; } ; typedef STACK X509_ALGORS; typedef struct X509_val_st { ASN1_TIME *notBefore; ASN1_TIME *notAfter; } X509_VAL; typedef struct X509_pubkey_st { X509_ALGOR *algor; ASN1_BIT_STRING *public_key; EVP_PKEY *pkey; } X509_PUBKEY; typedef struct X509_sig_st { X509_ALGOR *algor; ASN1_OCTET_STRING *digest; } X509_SIG; typedef struct X509_name_entry_st { ASN1_OBJECT *object; ASN1_STRING *value; int set; int size; } X509_NAME_ENTRY; struct X509_name_st { STACK *entries; int modified; BUF_MEM *bytes; unsigned long hash; } ; typedef struct X509_extension_st { ASN1_OBJECT *object; ASN1_BOOLEAN critical; ASN1_OCTET_STRING *value; } X509_EXTENSION; typedef STACK X509_EXTENSIONS; typedef struct x509_attributes_st { ASN1_OBJECT *object; int single; union { char *ptr; STACK *set; ASN1_TYPE *single; } value; } X509_ATTRIBUTE; typedef struct X509_req_info_st { ASN1_ENCODING enc; ASN1_INTEGER *version; X509_NAME *subject; X509_PUBKEY *pubkey; STACK *attributes; } X509_REQ_INFO; typedef struct X509_req_st { X509_REQ_INFO *req_info; X509_ALGOR *sig_alg; ASN1_BIT_STRING *signature; int references; } X509_REQ; typedef struct x509_cinf_st { ASN1_INTEGER *version; ASN1_INTEGER *serialNumber; X509_ALGOR *signature; X509_NAME *issuer; X509_VAL *validity; X509_NAME *subject; X509_PUBKEY *key; ASN1_BIT_STRING *issuerUID; ASN1_BIT_STRING *subjectUID; STACK *extensions; ASN1_ENCODING enc; } X509_CINF; typedef struct x509_cert_aux_st { STACK *trust; STACK *reject; ASN1_UTF8STRING *alias; ASN1_OCTET_STRING *keyid; STACK *other; } X509_CERT_AUX; struct x509_st { X509_CINF *cert_info; X509_ALGOR *sig_alg; ASN1_BIT_STRING *signature; int valid; int references; char *name; CRYPTO_EX_DATA ex_data; long ex_pathlen; long ex_pcpathlen; unsigned long ex_flags; unsigned long ex_kusage; unsigned long ex_xkusage; unsigned long ex_nscert; ASN1_OCTET_STRING *skid; struct AUTHORITY_KEYID_st *akid; X509_POLICY_CACHE *policy_cache; unsigned char sha1_hash[20]; X509_CERT_AUX *aux; } ; typedef struct x509_trust_st { int trust; int flags; int (*check_trust) (struct x509_trust_st *, X509 *, int); char *name; int arg1; void *arg2; } X509_TRUST; typedef struct x509_cert_pair_st { X509 *forward; X509 *reverse; } X509_CERT_PAIR; #line 319 "/usr/include/openssl/x509.h" #line 349 "/usr/include/openssl/x509.h" #line 362 "/usr/include/openssl/x509.h" #line 410 "/usr/include/openssl/x509.h" typedef struct X509_revoked_st { ASN1_INTEGER *serialNumber; ASN1_TIME *revocationDate; STACK *extensions; int sequence; } X509_REVOKED; typedef struct X509_crl_info_st { ASN1_INTEGER *version; X509_ALGOR *sig_alg; X509_NAME *issuer; ASN1_TIME *lastUpdate; ASN1_TIME *nextUpdate; STACK *revoked; STACK *extensions; ASN1_ENCODING enc; } X509_CRL_INFO; struct X509_crl_st { X509_CRL_INFO *crl; X509_ALGOR *sig_alg; ASN1_BIT_STRING *signature; int references; } ; typedef struct private_key_st { int version; X509_ALGOR *enc_algor; ASN1_OCTET_STRING *enc_pkey; EVP_PKEY *dec_pkey; int key_length; char *key_data; int key_free; EVP_CIPHER_INFO cipher; int references; } X509_PKEY; typedef struct X509_info_st { X509 *x509; X509_CRL *crl; X509_PKEY *x_pkey; EVP_CIPHER_INFO enc_cipher; int enc_len; char *enc_data; int references; } X509_INFO; typedef struct Netscape_spkac_st { X509_PUBKEY *pubkey; ASN1_IA5STRING *challenge; } NETSCAPE_SPKAC; typedef struct Netscape_spki_st { NETSCAPE_SPKAC *spkac; X509_ALGOR *sig_algor; ASN1_BIT_STRING *signature; } NETSCAPE_SPKI; typedef struct Netscape_certificate_sequence { ASN1_OBJECT *type; STACK *certs; } NETSCAPE_CERT_SEQUENCE; typedef struct PBEPARAM_st { ASN1_OCTET_STRING *salt; ASN1_INTEGER *iter; } PBEPARAM; typedef struct PBE2PARAM_st { X509_ALGOR *keyfunc; X509_ALGOR *encryption; } PBE2PARAM; typedef struct PBKDF2PARAM_st { ASN1_TYPE *salt; ASN1_INTEGER *iter; ASN1_INTEGER *keylength; X509_ALGOR *prf; } PBKDF2PARAM; typedef struct pkcs8_priv_key_info_st { int broken; ASN1_INTEGER *version; X509_ALGOR *pkeyalg; ASN1_TYPE *pkey; STACK *attributes; } PKCS8_PRIV_KEY_INFO; #line 1 "/usr/include/openssl/x509_vfy.h" #line 66 "/usr/include/openssl/x509_vfy.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 71 "/usr/include/openssl/x509_vfy.h" #line 1 "/usr/include/openssl/lhash.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 67 "/usr/include/openssl/lhash.h" typedef struct lhash_node_st { void *data; struct lhash_node_st *next; unsigned long hash; } LHASH_NODE; typedef int (*LHASH_COMP_FN_TYPE) (const void *, const void *); typedef unsigned long (*LHASH_HASH_FN_TYPE) (const void *); typedef void (*LHASH_DOALL_FN_TYPE) (void *); typedef void (*LHASH_DOALL_ARG_FN_TYPE) (void *, void *); #line 109 "/usr/include/openssl/lhash.h" #line 119 "/usr/include/openssl/lhash.h" #line 128 "/usr/include/openssl/lhash.h" #line 138 "/usr/include/openssl/lhash.h" typedef struct lhash_st { LHASH_NODE **b; LHASH_COMP_FN_TYPE comp; LHASH_HASH_FN_TYPE hash; unsigned int num_nodes; unsigned int num_alloc_nodes; unsigned int p; unsigned int pmax; unsigned long up_load; unsigned long down_load; unsigned long num_items; unsigned long num_expands; unsigned long num_expand_reallocs; unsigned long num_contracts; unsigned long num_contract_reallocs; unsigned long num_hash_calls; unsigned long num_comp_calls; unsigned long num_insert; unsigned long num_replace; unsigned long num_delete; unsigned long num_no_delete; unsigned long num_retrieve; unsigned long num_retrieve_miss; unsigned long num_hash_comps; int error; } LHASH; LHASH *lh_new(LHASH_HASH_FN_TYPE h, LHASH_COMP_FN_TYPE c); void lh_free(LHASH *lh); void *lh_insert(LHASH *lh, void *data); void *lh_delete(LHASH *lh, const void *data); void *lh_retrieve(LHASH *lh, const void *data); void lh_doall(LHASH *lh, LHASH_DOALL_FN_TYPE func); void lh_doall_arg(LHASH *lh, LHASH_DOALL_ARG_FN_TYPE func, void *arg); unsigned long lh_strhash(const char *c); unsigned long lh_num_items(const LHASH *lh); void lh_stats(const LHASH *lh, FILE *out); void lh_node_stats(const LHASH *lh, FILE *out); void lh_node_usage_stats(const LHASH *lh, FILE *out); void lh_stats_bio(const LHASH *lh, BIO *out); void lh_node_stats_bio(const LHASH *lh, BIO *out); void lh_node_usage_stats_bio(const LHASH *lh, BIO *out); #line 73 "/usr/include/openssl/x509_vfy.h" #line 1 "/usr/include/openssl/symhacks.h" #line 436 "/usr/include/openssl/symhacks.h" #line 77 "/usr/include/openssl/x509_vfy.h" typedef struct x509_hash_dir_st { int num_dirs; char **dirs; int *dirs_type; int num_dirs_alloced; } X509_HASH_DIR_CTX; typedef struct x509_file_st { int num_paths; int num_alloced; char **paths; int *path_type; } X509_CERT_FILE_CTX; typedef struct x509_object_st { int type; union { char *ptr; X509 *x509; X509_CRL *crl; EVP_PKEY *pkey; } data; } X509_OBJECT; typedef struct x509_lookup_st X509_LOOKUP; typedef struct x509_lookup_method_st { const char *name; int (*new_item) (X509_LOOKUP *ctx); void (*free) (X509_LOOKUP *ctx); int (*init) (X509_LOOKUP *ctx); int (*shutdown) (X509_LOOKUP *ctx); int (*ctrl) (X509_LOOKUP *ctx, int cmd, const char *argc, long argl, char **ret); int (*get_by_subject) (X509_LOOKUP *ctx, int type, X509_NAME *name, X509_OBJECT *ret); int (*get_by_issuer_serial) (X509_LOOKUP *ctx, int type, X509_NAME *name, ASN1_INTEGER *serial, X509_OBJECT *ret); int (*get_by_fingerprint) (X509_LOOKUP *ctx, int type, unsigned char *bytes, int len, X509_OBJECT *ret); int (*get_by_alias) (X509_LOOKUP *ctx, int type, char *str, int len, X509_OBJECT *ret); } X509_LOOKUP_METHOD; typedef struct X509_VERIFY_PARAM_st { char *name; time_t check_time; unsigned long inh_flags; unsigned long flags; int purpose; int trust; int depth; STACK *policies; } X509_VERIFY_PARAM; struct x509_store_st { int cache; STACK *objs; STACK *get_cert_methods; X509_VERIFY_PARAM *param; int (*verify) (X509_STORE_CTX *ctx); int (*verify_cb) (int ok, X509_STORE_CTX *ctx); int (*get_issuer) (X509 **issuer, X509_STORE_CTX *ctx, X509 *x); int (*check_issued) (X509_STORE_CTX *ctx, X509 *x, X509 *issuer); int (*check_revocation) (X509_STORE_CTX *ctx); int (*get_crl) (X509_STORE_CTX *ctx, X509_CRL **crl, X509 *x); int (*check_crl) (X509_STORE_CTX *ctx, X509_CRL *crl); int (*cert_crl) (X509_STORE_CTX *ctx, X509_CRL *crl, X509 *x); int (*cleanup) (X509_STORE_CTX *ctx); CRYPTO_EX_DATA ex_data; int references; } ; int X509_STORE_set_depth(X509_STORE *store, int depth); struct x509_lookup_st { int init; int skip; X509_LOOKUP_METHOD *method; char *method_data; X509_STORE *store_ctx; } ; struct x509_store_ctx_st { X509_STORE *ctx; int current_method; X509 *cert; STACK *untrusted; STACK *crls; X509_VERIFY_PARAM *param; void *other_ctx; int (*verify) (X509_STORE_CTX *ctx); int (*verify_cb) (int ok, X509_STORE_CTX *ctx); int (*get_issuer) (X509 **issuer, X509_STORE_CTX *ctx, X509 *x); int (*check_issued) (X509_STORE_CTX *ctx, X509 *x, X509 *issuer); int (*check_revocation) (X509_STORE_CTX *ctx); int (*get_crl) (X509_STORE_CTX *ctx, X509_CRL **crl, X509 *x); int (*check_crl) (X509_STORE_CTX *ctx, X509_CRL *crl); int (*cert_crl) (X509_STORE_CTX *ctx, X509_CRL *crl, X509 *x); int (*check_policy) (X509_STORE_CTX *ctx); int (*cleanup) (X509_STORE_CTX *ctx); int valid; int last_untrusted; STACK *chain; X509_POLICY_TREE *tree; int explicit_policy; int error_depth; int error; X509 *current_cert; X509 *current_issuer; X509_CRL *current_crl; CRYPTO_EX_DATA ex_data; } ; void X509_STORE_CTX_set_depth(X509_STORE_CTX *ctx, int depth); #line 330 "/usr/include/openssl/x509_vfy.h" #line 344 "/usr/include/openssl/x509_vfy.h" int X509_OBJECT_idx_by_subject(STACK *h, int type, X509_NAME *name); X509_OBJECT *X509_OBJECT_retrieve_by_subject(STACK *h, int type, X509_NAME *name); X509_OBJECT *X509_OBJECT_retrieve_match(STACK *h, X509_OBJECT *x); void X509_OBJECT_up_ref_count(X509_OBJECT *a); void X509_OBJECT_free_contents(X509_OBJECT *a); X509_STORE *X509_STORE_new(void); void X509_STORE_free(X509_STORE *v); int X509_STORE_set_flags(X509_STORE *ctx, unsigned long flags); int X509_STORE_set_purpose(X509_STORE *ctx, int purpose); int X509_STORE_set_trust(X509_STORE *ctx, int trust); int X509_STORE_set1_param(X509_STORE *ctx, X509_VERIFY_PARAM *pm); X509_STORE_CTX *X509_STORE_CTX_new(void); int X509_STORE_CTX_get1_issuer(X509 **issuer, X509_STORE_CTX *ctx, X509 *x); void X509_STORE_CTX_free(X509_STORE_CTX *ctx); int X509_STORE_CTX_init(X509_STORE_CTX *ctx, X509_STORE *store, X509 *x509, STACK *chain); void X509_STORE_CTX_trusted_stack(X509_STORE_CTX *ctx, STACK *sk); void X509_STORE_CTX_cleanup(X509_STORE_CTX *ctx); X509_LOOKUP *X509_STORE_add_lookup(X509_STORE *v, X509_LOOKUP_METHOD *m); X509_LOOKUP_METHOD *X509_LOOKUP_hash_dir(void); X509_LOOKUP_METHOD *X509_LOOKUP_file(void); int X509_STORE_add_cert(X509_STORE *ctx, X509 *x); int X509_STORE_add_crl(X509_STORE *ctx, X509_CRL *x); int X509_STORE_get_by_subject(X509_STORE_CTX *vs, int type, X509_NAME *name, X509_OBJECT *ret); int X509_LOOKUP_ctrl(X509_LOOKUP *ctx, int cmd, const char *argc, long argl, char **ret); int X509_load_cert_file(X509_LOOKUP *ctx, const char *file, int type); int X509_load_crl_file(X509_LOOKUP *ctx, const char *file, int type); int X509_load_cert_crl_file(X509_LOOKUP *ctx, const char *file, int type); X509_LOOKUP *X509_LOOKUP_new(X509_LOOKUP_METHOD *method); void X509_LOOKUP_free(X509_LOOKUP *ctx); int X509_LOOKUP_init(X509_LOOKUP *ctx); int X509_LOOKUP_by_subject(X509_LOOKUP *ctx, int type, X509_NAME *name, X509_OBJECT *ret); int X509_LOOKUP_by_issuer_serial(X509_LOOKUP *ctx, int type, X509_NAME *name, ASN1_INTEGER *serial, X509_OBJECT *ret); int X509_LOOKUP_by_fingerprint(X509_LOOKUP *ctx, int type, unsigned char *bytes, int len, X509_OBJECT *ret); int X509_LOOKUP_by_alias(X509_LOOKUP *ctx, int type, char *str, int len, X509_OBJECT *ret); int X509_LOOKUP_shutdown(X509_LOOKUP *ctx); int X509_STORE_load_locations(X509_STORE *ctx, const char *file, const char *dir); int X509_STORE_set_default_paths(X509_STORE *ctx); int X509_STORE_CTX_get_ex_new_index(long argl, void *argp, CRYPTO_EX_new *new_func, CRYPTO_EX_dup *dup_func, CRYPTO_EX_free *free_func); int X509_STORE_CTX_set_ex_data(X509_STORE_CTX *ctx, int idx, void *data); void *X509_STORE_CTX_get_ex_data(X509_STORE_CTX *ctx, int idx); int X509_STORE_CTX_get_error(X509_STORE_CTX *ctx); void X509_STORE_CTX_set_error(X509_STORE_CTX *ctx, int s); int X509_STORE_CTX_get_error_depth(X509_STORE_CTX *ctx); X509 *X509_STORE_CTX_get_current_cert(X509_STORE_CTX *ctx); STACK *X509_STORE_CTX_get_chain(X509_STORE_CTX *ctx); STACK *X509_STORE_CTX_get1_chain(X509_STORE_CTX *ctx); void X509_STORE_CTX_set_cert(X509_STORE_CTX *c, X509 *x); void X509_STORE_CTX_set_chain(X509_STORE_CTX *c, STACK *sk); void X509_STORE_CTX_set0_crls(X509_STORE_CTX *c, STACK *sk); int X509_STORE_CTX_set_purpose(X509_STORE_CTX *ctx, int purpose); int X509_STORE_CTX_set_trust(X509_STORE_CTX *ctx, int trust); int X509_STORE_CTX_purpose_inherit(X509_STORE_CTX *ctx, int def_purpose, int purpose, int trust); void X509_STORE_CTX_set_flags(X509_STORE_CTX *ctx, unsigned long flags); void X509_STORE_CTX_set_time(X509_STORE_CTX *ctx, unsigned long flags, time_t t); void X509_STORE_CTX_set_verify_cb(X509_STORE_CTX *ctx, int (*verify_cb) (int, X509_STORE_CTX *)); X509_POLICY_TREE *X509_STORE_CTX_get0_policy_tree(X509_STORE_CTX *ctx); int X509_STORE_CTX_get_explicit_policy(X509_STORE_CTX *ctx); X509_VERIFY_PARAM *X509_STORE_CTX_get0_param(X509_STORE_CTX *ctx); void X509_STORE_CTX_set0_param(X509_STORE_CTX *ctx, X509_VERIFY_PARAM *param); int X509_STORE_CTX_set_default(X509_STORE_CTX *ctx, const char *name); X509_VERIFY_PARAM *X509_VERIFY_PARAM_new(void); void X509_VERIFY_PARAM_free(X509_VERIFY_PARAM *param); int X509_VERIFY_PARAM_inherit(X509_VERIFY_PARAM *to, const X509_VERIFY_PARAM *from); int X509_VERIFY_PARAM_set1(X509_VERIFY_PARAM *to, const X509_VERIFY_PARAM *from); int X509_VERIFY_PARAM_set1_name(X509_VERIFY_PARAM *param, const char *name); int X509_VERIFY_PARAM_set_flags(X509_VERIFY_PARAM *param, unsigned long flags); int X509_VERIFY_PARAM_clear_flags(X509_VERIFY_PARAM *param, unsigned long flags); unsigned long X509_VERIFY_PARAM_get_flags(X509_VERIFY_PARAM *param); int X509_VERIFY_PARAM_set_purpose(X509_VERIFY_PARAM *param, int purpose); int X509_VERIFY_PARAM_set_trust(X509_VERIFY_PARAM *param, int trust); void X509_VERIFY_PARAM_set_depth(X509_VERIFY_PARAM *param, int depth); void X509_VERIFY_PARAM_set_time(X509_VERIFY_PARAM *param, time_t t); int X509_VERIFY_PARAM_add0_policy(X509_VERIFY_PARAM *param, ASN1_OBJECT *policy); int X509_VERIFY_PARAM_set1_policies(X509_VERIFY_PARAM *param, STACK *policies); int X509_VERIFY_PARAM_get_depth(const X509_VERIFY_PARAM *param); int X509_VERIFY_PARAM_add0_table(X509_VERIFY_PARAM *param); const X509_VERIFY_PARAM *X509_VERIFY_PARAM_lookup(const char *name); void X509_VERIFY_PARAM_table_cleanup(void); int X509_policy_check(X509_POLICY_TREE **ptree, int *pexplicit_policy, STACK *certs, STACK *policy_oids, unsigned int flags); void X509_policy_tree_free(X509_POLICY_TREE *tree); int X509_policy_tree_level_count(const X509_POLICY_TREE *tree); X509_POLICY_LEVEL *X509_policy_tree_get0_level(const X509_POLICY_TREE *tree, int i); STACK *X509_policy_tree_get0_policies(const X509_POLICY_TREE *tree); STACK *X509_policy_tree_get0_user_policies(const X509_POLICY_TREE *tree); int X509_policy_level_node_count(X509_POLICY_LEVEL *level); X509_POLICY_NODE *X509_policy_level_get0_node(X509_POLICY_LEVEL *level, int i); const ASN1_OBJECT *X509_policy_node_get0_policy(const X509_POLICY_NODE *node); STACK *X509_policy_node_get0_qualifiers(const X509_POLICY_NODE *node); const X509_POLICY_NODE *X509_policy_node_get0_parent(const X509_POLICY_NODE *node); #line 545 "/usr/include/openssl/x509.h" #line 1 "/usr/include/openssl/pkcs7.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 65 "/usr/include/openssl/pkcs7.h" #line 1 "/usr/include/openssl/symhacks.h" #line 436 "/usr/include/openssl/symhacks.h" #line 67 "/usr/include/openssl/pkcs7.h" typedef struct pkcs7_issuer_and_serial_st { X509_NAME *issuer; ASN1_INTEGER *serial; } PKCS7_ISSUER_AND_SERIAL; typedef struct pkcs7_signer_info_st { ASN1_INTEGER *version; PKCS7_ISSUER_AND_SERIAL *issuer_and_serial; X509_ALGOR *digest_alg; STACK *auth_attr; X509_ALGOR *digest_enc_alg; ASN1_OCTET_STRING *enc_digest; STACK *unauth_attr; EVP_PKEY *pkey; } PKCS7_SIGNER_INFO; typedef struct pkcs7_recip_info_st { ASN1_INTEGER *version; PKCS7_ISSUER_AND_SERIAL *issuer_and_serial; X509_ALGOR *key_enc_algor; ASN1_OCTET_STRING *enc_key; X509 *cert; } PKCS7_RECIP_INFO; typedef struct pkcs7_signed_st { ASN1_INTEGER *version; STACK *md_algs; STACK *cert; STACK *crl; STACK *signer_info; struct pkcs7_st *contents; } PKCS7_SIGNED; typedef struct pkcs7_enc_content_st { ASN1_OBJECT *content_type; X509_ALGOR *algorithm; ASN1_OCTET_STRING *enc_data; const EVP_CIPHER *cipher; } PKCS7_ENC_CONTENT; typedef struct pkcs7_enveloped_st { ASN1_INTEGER *version; STACK *recipientinfo; PKCS7_ENC_CONTENT *enc_data; } PKCS7_ENVELOPE; typedef struct pkcs7_signedandenveloped_st { ASN1_INTEGER *version; STACK *md_algs; STACK *cert; STACK *crl; STACK *signer_info; PKCS7_ENC_CONTENT *enc_data; STACK *recipientinfo; } PKCS7_SIGN_ENVELOPE; typedef struct pkcs7_digest_st { ASN1_INTEGER *version; X509_ALGOR *md; struct pkcs7_st *contents; ASN1_OCTET_STRING *digest; } PKCS7_DIGEST; typedef struct pkcs7_encrypted_st { ASN1_INTEGER *version; PKCS7_ENC_CONTENT *enc_data; } PKCS7_ENCRYPT; typedef struct pkcs7_st { unsigned char *asn1; long length; int state; int detached; ASN1_OBJECT *type; union { char *ptr; ASN1_OCTET_STRING *data; PKCS7_SIGNED *sign; PKCS7_ENVELOPE *enveloped; PKCS7_SIGN_ENVELOPE *signed_and_enveloped; PKCS7_DIGEST *digest; PKCS7_ENCRYPT *encrypted; ASN1_TYPE *other; } d; } PKCS7; #line 218 "/usr/include/openssl/pkcs7.h" #line 235 "/usr/include/openssl/pkcs7.h" #line 252 "/usr/include/openssl/pkcs7.h" #line 264 "/usr/include/openssl/pkcs7.h" PKCS7_ISSUER_AND_SERIAL *PKCS7_ISSUER_AND_SERIAL_new(void); void PKCS7_ISSUER_AND_SERIAL_free(PKCS7_ISSUER_AND_SERIAL *a); PKCS7_ISSUER_AND_SERIAL *d2i_PKCS7_ISSUER_AND_SERIAL(PKCS7_ISSUER_AND_SERIAL * *a, const unsigned char * *in, long len); int i2d_PKCS7_ISSUER_AND_SERIAL(PKCS7_ISSUER_AND_SERIAL *a, unsigned char * *out); extern const ASN1_ITEM PKCS7_ISSUER_AND_SERIAL_it; int PKCS7_ISSUER_AND_SERIAL_digest(PKCS7_ISSUER_AND_SERIAL *data, const EVP_MD *type, unsigned char *md, unsigned int *len); PKCS7 *d2i_PKCS7_fp(FILE *fp, PKCS7 **p7); int i2d_PKCS7_fp(FILE *fp, PKCS7 *p7); PKCS7 *PKCS7_dup(PKCS7 *p7); PKCS7 *d2i_PKCS7_bio(BIO *bp, PKCS7 **p7); int i2d_PKCS7_bio(BIO *bp, PKCS7 *p7); PKCS7_SIGNER_INFO *PKCS7_SIGNER_INFO_new(void); void PKCS7_SIGNER_INFO_free(PKCS7_SIGNER_INFO *a); PKCS7_SIGNER_INFO *d2i_PKCS7_SIGNER_INFO(PKCS7_SIGNER_INFO * *a, const unsigned char * *in, long len); int i2d_PKCS7_SIGNER_INFO(PKCS7_SIGNER_INFO *a, unsigned char * *out); extern const ASN1_ITEM PKCS7_SIGNER_INFO_it; PKCS7_RECIP_INFO *PKCS7_RECIP_INFO_new(void); void PKCS7_RECIP_INFO_free(PKCS7_RECIP_INFO *a); PKCS7_RECIP_INFO *d2i_PKCS7_RECIP_INFO(PKCS7_RECIP_INFO * *a, const unsigned char * *in, long len); int i2d_PKCS7_RECIP_INFO(PKCS7_RECIP_INFO *a, unsigned char * *out); extern const ASN1_ITEM PKCS7_RECIP_INFO_it; PKCS7_SIGNED *PKCS7_SIGNED_new(void); void PKCS7_SIGNED_free(PKCS7_SIGNED *a); PKCS7_SIGNED *d2i_PKCS7_SIGNED(PKCS7_SIGNED * *a, const unsigned char * *in, long len); int i2d_PKCS7_SIGNED(PKCS7_SIGNED *a, unsigned char * *out); extern const ASN1_ITEM PKCS7_SIGNED_it; PKCS7_ENC_CONTENT *PKCS7_ENC_CONTENT_new(void); void PKCS7_ENC_CONTENT_free(PKCS7_ENC_CONTENT *a); PKCS7_ENC_CONTENT *d2i_PKCS7_ENC_CONTENT(PKCS7_ENC_CONTENT * *a, const unsigned char * *in, long len); int i2d_PKCS7_ENC_CONTENT(PKCS7_ENC_CONTENT *a, unsigned char * *out); extern const ASN1_ITEM PKCS7_ENC_CONTENT_it; PKCS7_ENVELOPE *PKCS7_ENVELOPE_new(void); void PKCS7_ENVELOPE_free(PKCS7_ENVELOPE *a); PKCS7_ENVELOPE *d2i_PKCS7_ENVELOPE(PKCS7_ENVELOPE * *a, const unsigned char * *in, long len); int i2d_PKCS7_ENVELOPE(PKCS7_ENVELOPE *a, unsigned char * *out); extern const ASN1_ITEM PKCS7_ENVELOPE_it; PKCS7_SIGN_ENVELOPE *PKCS7_SIGN_ENVELOPE_new(void); void PKCS7_SIGN_ENVELOPE_free(PKCS7_SIGN_ENVELOPE *a); PKCS7_SIGN_ENVELOPE *d2i_PKCS7_SIGN_ENVELOPE(PKCS7_SIGN_ENVELOPE * *a, const unsigned char * *in, long len); int i2d_PKCS7_SIGN_ENVELOPE(PKCS7_SIGN_ENVELOPE *a, unsigned char * *out); extern const ASN1_ITEM PKCS7_SIGN_ENVELOPE_it; PKCS7_DIGEST *PKCS7_DIGEST_new(void); void PKCS7_DIGEST_free(PKCS7_DIGEST *a); PKCS7_DIGEST *d2i_PKCS7_DIGEST(PKCS7_DIGEST * *a, const unsigned char * *in, long len); int i2d_PKCS7_DIGEST(PKCS7_DIGEST *a, unsigned char * *out); extern const ASN1_ITEM PKCS7_DIGEST_it; PKCS7_ENCRYPT *PKCS7_ENCRYPT_new(void); void PKCS7_ENCRYPT_free(PKCS7_ENCRYPT *a); PKCS7_ENCRYPT *d2i_PKCS7_ENCRYPT(PKCS7_ENCRYPT * *a, const unsigned char * *in, long len); int i2d_PKCS7_ENCRYPT(PKCS7_ENCRYPT *a, unsigned char * *out); extern const ASN1_ITEM PKCS7_ENCRYPT_it; PKCS7 *PKCS7_new(void); void PKCS7_free(PKCS7 *a); PKCS7 *d2i_PKCS7(PKCS7 * *a, const unsigned char * *in, long len); int i2d_PKCS7(PKCS7 *a, unsigned char * *out); extern const ASN1_ITEM PKCS7_it; extern const ASN1_ITEM PKCS7_ATTR_SIGN_it; extern const ASN1_ITEM PKCS7_ATTR_VERIFY_it; int i2d_PKCS7_NDEF(PKCS7 *a, unsigned char * *out); long PKCS7_ctrl(PKCS7 *p7, int cmd, long larg, char *parg); int PKCS7_set_type(PKCS7 *p7, int type); int PKCS7_set0_type_other(PKCS7 *p7, int type, ASN1_TYPE *other); int PKCS7_set_content(PKCS7 *p7, PKCS7 *p7_data); int PKCS7_SIGNER_INFO_set(PKCS7_SIGNER_INFO *p7i, X509 *x509, EVP_PKEY *pkey, const EVP_MD *dgst); int PKCS7_add_signer(PKCS7 *p7, PKCS7_SIGNER_INFO *p7i); int PKCS7_add_certificate(PKCS7 *p7, X509 *x509); int PKCS7_add_crl(PKCS7 *p7, X509_CRL *x509); int PKCS7_content_new(PKCS7 *p7, int nid); int PKCS7_dataVerify(X509_STORE *cert_store, X509_STORE_CTX *ctx, BIO *bio, PKCS7 *p7, PKCS7_SIGNER_INFO *si); int PKCS7_signatureVerify(BIO *bio, PKCS7 *p7, PKCS7_SIGNER_INFO *si, X509 *x509); BIO *PKCS7_dataInit(PKCS7 *p7, BIO *bio); int PKCS7_dataFinal(PKCS7 *p7, BIO *bio); BIO *PKCS7_dataDecode(PKCS7 *p7, EVP_PKEY *pkey, BIO *in_bio, X509 *pcert); PKCS7_SIGNER_INFO *PKCS7_add_signature(PKCS7 *p7, X509 *x509, EVP_PKEY *pkey, const EVP_MD *dgst); X509 *PKCS7_cert_from_signer_info(PKCS7 *p7, PKCS7_SIGNER_INFO *si); int PKCS7_set_digest(PKCS7 *p7, const EVP_MD *md); STACK *PKCS7_get_signer_info(PKCS7 *p7); PKCS7_RECIP_INFO *PKCS7_add_recipient(PKCS7 *p7, X509 *x509); int PKCS7_add_recipient_info(PKCS7 *p7, PKCS7_RECIP_INFO *ri); int PKCS7_RECIP_INFO_set(PKCS7_RECIP_INFO *p7i, X509 *x509); int PKCS7_set_cipher(PKCS7 *p7, const EVP_CIPHER *cipher); PKCS7_ISSUER_AND_SERIAL *PKCS7_get_issuer_and_serial(PKCS7 *p7, int idx); ASN1_OCTET_STRING *PKCS7_digest_from_attributes(STACK *sk); int PKCS7_add_signed_attribute(PKCS7_SIGNER_INFO *p7si, int nid, int type, void *data); int PKCS7_add_attribute(PKCS7_SIGNER_INFO *p7si, int nid, int atrtype, void *value); ASN1_TYPE *PKCS7_get_attribute(PKCS7_SIGNER_INFO *si, int nid); ASN1_TYPE *PKCS7_get_signed_attribute(PKCS7_SIGNER_INFO *si, int nid); int PKCS7_set_signed_attributes(PKCS7_SIGNER_INFO *p7si, STACK *sk); int PKCS7_set_attributes(PKCS7_SIGNER_INFO *p7si, STACK *sk); PKCS7 *PKCS7_sign(X509 *signcert, EVP_PKEY *pkey, STACK *certs, BIO *data, int flags); int PKCS7_verify(PKCS7 *p7, STACK *certs, X509_STORE *store, BIO *indata, BIO *out, int flags); STACK *PKCS7_get0_signers(PKCS7 *p7, STACK *certs, int flags); PKCS7 *PKCS7_encrypt(STACK *certs, BIO *in, const EVP_CIPHER *cipher, int flags); int PKCS7_decrypt(PKCS7 *p7, EVP_PKEY *pkey, X509 *cert, BIO *data, int flags); int PKCS7_add_attrib_smimecap(PKCS7_SIGNER_INFO *si, STACK *cap); STACK *PKCS7_get_smimecap(PKCS7_SIGNER_INFO *si); int PKCS7_simple_smimecap(STACK *sk, int nid, int arg); int SMIME_write_PKCS7(BIO *bio, PKCS7 *p7, BIO *data, int flags); PKCS7 *SMIME_read_PKCS7(BIO *bio, BIO **bcont); int SMIME_crlf_copy(BIO *in, BIO *out, int flags); int SMIME_text(BIO *in, BIO *out); void ERR_load_PKCS7_strings(void); #line 398 "/usr/include/openssl/pkcs7.h" #line 446 "/usr/include/openssl/pkcs7.h" #line 546 "/usr/include/openssl/x509.h" #line 695 "/usr/include/openssl/x509.h" #line 709 "/usr/include/openssl/x509.h" const char *X509_verify_cert_error_string(long n); int X509_verify(X509 *a, EVP_PKEY *r); int X509_REQ_verify(X509_REQ *a, EVP_PKEY *r); int X509_CRL_verify(X509_CRL *a, EVP_PKEY *r); int NETSCAPE_SPKI_verify(NETSCAPE_SPKI *a, EVP_PKEY *r); NETSCAPE_SPKI *NETSCAPE_SPKI_b64_decode(const char *str, int len); char *NETSCAPE_SPKI_b64_encode(NETSCAPE_SPKI *x); EVP_PKEY *NETSCAPE_SPKI_get_pubkey(NETSCAPE_SPKI *x); int NETSCAPE_SPKI_set_pubkey(NETSCAPE_SPKI *x, EVP_PKEY *pkey); int NETSCAPE_SPKI_print(BIO *out, NETSCAPE_SPKI *spki); int X509_signature_print(BIO *bp, X509_ALGOR *alg, ASN1_STRING *sig); int X509_sign(X509 *x, EVP_PKEY *pkey, const EVP_MD *md); int X509_REQ_sign(X509_REQ *x, EVP_PKEY *pkey, const EVP_MD *md); int X509_CRL_sign(X509_CRL *x, EVP_PKEY *pkey, const EVP_MD *md); int NETSCAPE_SPKI_sign(NETSCAPE_SPKI *x, EVP_PKEY *pkey, const EVP_MD *md); int X509_pubkey_digest(const X509 *data, const EVP_MD *type, unsigned char *md, unsigned int *len); int X509_digest(const X509 *data, const EVP_MD *type, unsigned char *md, unsigned int *len); int X509_CRL_digest(const X509_CRL *data, const EVP_MD *type, unsigned char *md, unsigned int *len); int X509_REQ_digest(const X509_REQ *data, const EVP_MD *type, unsigned char *md, unsigned int *len); int X509_NAME_digest(const X509_NAME *data, const EVP_MD *type, unsigned char *md, unsigned int *len); X509 *d2i_X509_fp(FILE *fp, X509 **x509); int i2d_X509_fp(FILE *fp, X509 *x509); X509_CRL *d2i_X509_CRL_fp(FILE *fp, X509_CRL **crl); int i2d_X509_CRL_fp(FILE *fp, X509_CRL *crl); X509_REQ *d2i_X509_REQ_fp(FILE *fp, X509_REQ **req); int i2d_X509_REQ_fp(FILE *fp, X509_REQ *req); RSA *d2i_RSAPrivateKey_fp(FILE *fp, RSA **rsa); int i2d_RSAPrivateKey_fp(FILE *fp, RSA *rsa); RSA *d2i_RSAPublicKey_fp(FILE *fp, RSA **rsa); int i2d_RSAPublicKey_fp(FILE *fp, RSA *rsa); RSA *d2i_RSA_PUBKEY_fp(FILE *fp, RSA **rsa); int i2d_RSA_PUBKEY_fp(FILE *fp, RSA *rsa); DSA *d2i_DSA_PUBKEY_fp(FILE *fp, DSA **dsa); int i2d_DSA_PUBKEY_fp(FILE *fp, DSA *dsa); DSA *d2i_DSAPrivateKey_fp(FILE *fp, DSA **dsa); int i2d_DSAPrivateKey_fp(FILE *fp, DSA *dsa); X509_SIG *d2i_PKCS8_fp(FILE *fp, X509_SIG **p8); int i2d_PKCS8_fp(FILE *fp, X509_SIG *p8); PKCS8_PRIV_KEY_INFO *d2i_PKCS8_PRIV_KEY_INFO_fp(FILE *fp, PKCS8_PRIV_KEY_INFO **p8inf); int i2d_PKCS8_PRIV_KEY_INFO_fp(FILE *fp, PKCS8_PRIV_KEY_INFO *p8inf); int i2d_PKCS8PrivateKeyInfo_fp(FILE *fp, EVP_PKEY *key); int i2d_PrivateKey_fp(FILE *fp, EVP_PKEY *pkey); EVP_PKEY *d2i_PrivateKey_fp(FILE *fp, EVP_PKEY **a); int i2d_PUBKEY_fp(FILE *fp, EVP_PKEY *pkey); EVP_PKEY *d2i_PUBKEY_fp(FILE *fp, EVP_PKEY **a); X509 *d2i_X509_bio(BIO *bp, X509 **x509); int i2d_X509_bio(BIO *bp, X509 *x509); X509_CRL *d2i_X509_CRL_bio(BIO *bp, X509_CRL **crl); int i2d_X509_CRL_bio(BIO *bp, X509_CRL *crl); X509_REQ *d2i_X509_REQ_bio(BIO *bp, X509_REQ **req); int i2d_X509_REQ_bio(BIO *bp, X509_REQ *req); RSA *d2i_RSAPrivateKey_bio(BIO *bp, RSA **rsa); int i2d_RSAPrivateKey_bio(BIO *bp, RSA *rsa); RSA *d2i_RSAPublicKey_bio(BIO *bp, RSA **rsa); int i2d_RSAPublicKey_bio(BIO *bp, RSA *rsa); RSA *d2i_RSA_PUBKEY_bio(BIO *bp, RSA **rsa); int i2d_RSA_PUBKEY_bio(BIO *bp, RSA *rsa); DSA *d2i_DSA_PUBKEY_bio(BIO *bp, DSA **dsa); int i2d_DSA_PUBKEY_bio(BIO *bp, DSA *dsa); DSA *d2i_DSAPrivateKey_bio(BIO *bp, DSA **dsa); int i2d_DSAPrivateKey_bio(BIO *bp, DSA *dsa); X509_SIG *d2i_PKCS8_bio(BIO *bp, X509_SIG **p8); int i2d_PKCS8_bio(BIO *bp, X509_SIG *p8); PKCS8_PRIV_KEY_INFO *d2i_PKCS8_PRIV_KEY_INFO_bio(BIO *bp, PKCS8_PRIV_KEY_INFO **p8inf); int i2d_PKCS8_PRIV_KEY_INFO_bio(BIO *bp, PKCS8_PRIV_KEY_INFO *p8inf); int i2d_PKCS8PrivateKeyInfo_bio(BIO *bp, EVP_PKEY *key); int i2d_PrivateKey_bio(BIO *bp, EVP_PKEY *pkey); EVP_PKEY *d2i_PrivateKey_bio(BIO *bp, EVP_PKEY **a); int i2d_PUBKEY_bio(BIO *bp, EVP_PKEY *pkey); EVP_PKEY *d2i_PUBKEY_bio(BIO *bp, EVP_PKEY **a); X509 *X509_dup(X509 *x509); X509_ATTRIBUTE *X509_ATTRIBUTE_dup(X509_ATTRIBUTE *xa); X509_EXTENSION *X509_EXTENSION_dup(X509_EXTENSION *ex); X509_CRL *X509_CRL_dup(X509_CRL *crl); X509_REQ *X509_REQ_dup(X509_REQ *req); X509_ALGOR *X509_ALGOR_dup(X509_ALGOR *xn); int X509_ALGOR_set0(X509_ALGOR *alg, ASN1_OBJECT *aobj, int ptype, void *pval); void X509_ALGOR_get0(ASN1_OBJECT **paobj, int *pptype, void **ppval, X509_ALGOR *algor); int X509_ALGOR_cmp(const X509_ALGOR *a, const X509_ALGOR *b); X509_NAME *X509_NAME_dup(X509_NAME *xn); X509_NAME_ENTRY *X509_NAME_ENTRY_dup(X509_NAME_ENTRY *ne); int X509_cmp_time(ASN1_TIME *s, time_t *t); int X509_cmp_current_time(ASN1_TIME *s); ASN1_TIME *X509_time_adj(ASN1_TIME *s, long adj, time_t *t); ASN1_TIME *X509_gmtime_adj(ASN1_TIME *s, long adj); const char *X509_get_default_cert_area(void); const char *X509_get_default_cert_dir(void); const char *X509_get_default_cert_file(void); const char *X509_get_default_cert_dir_env(void); const char *X509_get_default_cert_file_env(void); const char *X509_get_default_private_dir(void); X509_REQ *X509_to_X509_REQ(X509 *x, EVP_PKEY *pkey, const EVP_MD *md); X509 *X509_REQ_to_X509(X509_REQ *r, int days, EVP_PKEY *pkey); X509_ALGOR *X509_ALGOR_new(void); void X509_ALGOR_free(X509_ALGOR *a); X509_ALGOR *d2i_X509_ALGOR(X509_ALGOR * *a, const unsigned char * *in, long len); int i2d_X509_ALGOR(X509_ALGOR *a, unsigned char * *out); extern const ASN1_ITEM X509_ALGOR_it; X509_ALGORS *d2i_X509_ALGORS(X509_ALGORS * *a, const unsigned char * *in, long len); int i2d_X509_ALGORS(X509_ALGORS *a, unsigned char * *out); extern const ASN1_ITEM X509_ALGORS_it; X509_VAL *X509_VAL_new(void); void X509_VAL_free(X509_VAL *a); X509_VAL *d2i_X509_VAL(X509_VAL * *a, const unsigned char * *in, long len); int i2d_X509_VAL(X509_VAL *a, unsigned char * *out); extern const ASN1_ITEM X509_VAL_it; X509_PUBKEY *X509_PUBKEY_new(void); void X509_PUBKEY_free(X509_PUBKEY *a); X509_PUBKEY *d2i_X509_PUBKEY(X509_PUBKEY * *a, const unsigned char * *in, long len); int i2d_X509_PUBKEY(X509_PUBKEY *a, unsigned char * *out); extern const ASN1_ITEM X509_PUBKEY_it; int X509_PUBKEY_set(X509_PUBKEY **x, EVP_PKEY *pkey); EVP_PKEY *X509_PUBKEY_get(X509_PUBKEY *key); int X509_get_pubkey_parameters(EVP_PKEY *pkey, STACK *chain); int i2d_PUBKEY(EVP_PKEY *a, unsigned char **pp); EVP_PKEY *d2i_PUBKEY(EVP_PKEY **a, const unsigned char **pp, long length); int i2d_RSA_PUBKEY(RSA *a, unsigned char **pp); RSA *d2i_RSA_PUBKEY(RSA **a, const unsigned char **pp, long length); int i2d_DSA_PUBKEY(DSA *a, unsigned char **pp); DSA *d2i_DSA_PUBKEY(DSA **a, const unsigned char **pp, long length); X509_SIG *X509_SIG_new(void); void X509_SIG_free(X509_SIG *a); X509_SIG *d2i_X509_SIG(X509_SIG * *a, const unsigned char * *in, long len); int i2d_X509_SIG(X509_SIG *a, unsigned char * *out); extern const ASN1_ITEM X509_SIG_it; X509_REQ_INFO *X509_REQ_INFO_new(void); void X509_REQ_INFO_free(X509_REQ_INFO *a); X509_REQ_INFO *d2i_X509_REQ_INFO(X509_REQ_INFO * *a, const unsigned char * *in, long len); int i2d_X509_REQ_INFO(X509_REQ_INFO *a, unsigned char * *out); extern const ASN1_ITEM X509_REQ_INFO_it; X509_REQ *X509_REQ_new(void); void X509_REQ_free(X509_REQ *a); X509_REQ *d2i_X509_REQ(X509_REQ * *a, const unsigned char * *in, long len); int i2d_X509_REQ(X509_REQ *a, unsigned char * *out); extern const ASN1_ITEM X509_REQ_it; X509_ATTRIBUTE *X509_ATTRIBUTE_new(void); void X509_ATTRIBUTE_free(X509_ATTRIBUTE *a); X509_ATTRIBUTE *d2i_X509_ATTRIBUTE(X509_ATTRIBUTE * *a, const unsigned char * *in, long len); int i2d_X509_ATTRIBUTE(X509_ATTRIBUTE *a, unsigned char * *out); extern const ASN1_ITEM X509_ATTRIBUTE_it; X509_ATTRIBUTE *X509_ATTRIBUTE_create(int nid, int atrtype, void *value); X509_EXTENSION *X509_EXTENSION_new(void); void X509_EXTENSION_free(X509_EXTENSION *a); X509_EXTENSION *d2i_X509_EXTENSION(X509_EXTENSION * *a, const unsigned char * *in, long len); int i2d_X509_EXTENSION(X509_EXTENSION *a, unsigned char * *out); extern const ASN1_ITEM X509_EXTENSION_it; X509_EXTENSIONS *d2i_X509_EXTENSIONS(X509_EXTENSIONS * *a, const unsigned char * *in, long len); int i2d_X509_EXTENSIONS(X509_EXTENSIONS *a, unsigned char * *out); extern const ASN1_ITEM X509_EXTENSIONS_it; X509_NAME_ENTRY *X509_NAME_ENTRY_new(void); void X509_NAME_ENTRY_free(X509_NAME_ENTRY *a); X509_NAME_ENTRY *d2i_X509_NAME_ENTRY(X509_NAME_ENTRY * *a, const unsigned char * *in, long len); int i2d_X509_NAME_ENTRY(X509_NAME_ENTRY *a, unsigned char * *out); extern const ASN1_ITEM X509_NAME_ENTRY_it; X509_NAME *X509_NAME_new(void); void X509_NAME_free(X509_NAME *a); X509_NAME *d2i_X509_NAME(X509_NAME * *a, const unsigned char * *in, long len); int i2d_X509_NAME(X509_NAME *a, unsigned char * *out); extern const ASN1_ITEM X509_NAME_it; int X509_NAME_set(X509_NAME **xn, X509_NAME *name); X509_CINF *X509_CINF_new(void); void X509_CINF_free(X509_CINF *a); X509_CINF *d2i_X509_CINF(X509_CINF * *a, const unsigned char * *in, long len); int i2d_X509_CINF(X509_CINF *a, unsigned char * *out); extern const ASN1_ITEM X509_CINF_it; X509 *X509_new(void); void X509_free(X509 *a); X509 *d2i_X509(X509 * *a, const unsigned char * *in, long len); int i2d_X509(X509 *a, unsigned char * *out); extern const ASN1_ITEM X509_it; X509_CERT_AUX *X509_CERT_AUX_new(void); void X509_CERT_AUX_free(X509_CERT_AUX *a); X509_CERT_AUX *d2i_X509_CERT_AUX(X509_CERT_AUX * *a, const unsigned char * *in, long len); int i2d_X509_CERT_AUX(X509_CERT_AUX *a, unsigned char * *out); extern const ASN1_ITEM X509_CERT_AUX_it; X509_CERT_PAIR *X509_CERT_PAIR_new(void); void X509_CERT_PAIR_free(X509_CERT_PAIR *a); X509_CERT_PAIR *d2i_X509_CERT_PAIR(X509_CERT_PAIR * *a, const unsigned char * *in, long len); int i2d_X509_CERT_PAIR(X509_CERT_PAIR *a, unsigned char * *out); extern const ASN1_ITEM X509_CERT_PAIR_it; int X509_get_ex_new_index(long argl, void *argp, CRYPTO_EX_new *new_func, CRYPTO_EX_dup *dup_func, CRYPTO_EX_free *free_func); int X509_set_ex_data(X509 *r, int idx, void *arg); void *X509_get_ex_data(X509 *r, int idx); int i2d_X509_AUX(X509 *a, unsigned char **pp); X509 *d2i_X509_AUX(X509 **a, const unsigned char **pp, long length); int X509_alias_set1(X509 *x, unsigned char *name, int len); int X509_keyid_set1(X509 *x, unsigned char *id, int len); unsigned char *X509_alias_get0(X509 *x, int *len); unsigned char *X509_keyid_get0(X509 *x, int *len); int (*X509_TRUST_set_default(int (*trust) (int, X509 *, int))) (int, X509 *, int); int X509_TRUST_set(int *t, int trust); int X509_add1_trust_object(X509 *x, ASN1_OBJECT *obj); int X509_add1_reject_object(X509 *x, ASN1_OBJECT *obj); void X509_trust_clear(X509 *x); void X509_reject_clear(X509 *x); X509_REVOKED *X509_REVOKED_new(void); void X509_REVOKED_free(X509_REVOKED *a); X509_REVOKED *d2i_X509_REVOKED(X509_REVOKED * *a, const unsigned char * *in, long len); int i2d_X509_REVOKED(X509_REVOKED *a, unsigned char * *out); extern const ASN1_ITEM X509_REVOKED_it; X509_CRL_INFO *X509_CRL_INFO_new(void); void X509_CRL_INFO_free(X509_CRL_INFO *a); X509_CRL_INFO *d2i_X509_CRL_INFO(X509_CRL_INFO * *a, const unsigned char * *in, long len); int i2d_X509_CRL_INFO(X509_CRL_INFO *a, unsigned char * *out); extern const ASN1_ITEM X509_CRL_INFO_it; X509_CRL *X509_CRL_new(void); void X509_CRL_free(X509_CRL *a); X509_CRL *d2i_X509_CRL(X509_CRL * *a, const unsigned char * *in, long len); int i2d_X509_CRL(X509_CRL *a, unsigned char * *out); extern const ASN1_ITEM X509_CRL_it; int X509_CRL_add0_revoked(X509_CRL *crl, X509_REVOKED *rev); X509_PKEY *X509_PKEY_new(void); void X509_PKEY_free(X509_PKEY *a); int i2d_X509_PKEY(X509_PKEY *a, unsigned char **pp); X509_PKEY *d2i_X509_PKEY(X509_PKEY **a, const unsigned char **pp, long length); NETSCAPE_SPKI *NETSCAPE_SPKI_new(void); void NETSCAPE_SPKI_free(NETSCAPE_SPKI *a); NETSCAPE_SPKI *d2i_NETSCAPE_SPKI(NETSCAPE_SPKI * *a, const unsigned char * *in, long len); int i2d_NETSCAPE_SPKI(NETSCAPE_SPKI *a, unsigned char * *out); extern const ASN1_ITEM NETSCAPE_SPKI_it; NETSCAPE_SPKAC *NETSCAPE_SPKAC_new(void); void NETSCAPE_SPKAC_free(NETSCAPE_SPKAC *a); NETSCAPE_SPKAC *d2i_NETSCAPE_SPKAC(NETSCAPE_SPKAC * *a, const unsigned char * *in, long len); int i2d_NETSCAPE_SPKAC(NETSCAPE_SPKAC *a, unsigned char * *out); extern const ASN1_ITEM NETSCAPE_SPKAC_it; NETSCAPE_CERT_SEQUENCE *NETSCAPE_CERT_SEQUENCE_new(void); void NETSCAPE_CERT_SEQUENCE_free(NETSCAPE_CERT_SEQUENCE *a); NETSCAPE_CERT_SEQUENCE *d2i_NETSCAPE_CERT_SEQUENCE(NETSCAPE_CERT_SEQUENCE * *a, const unsigned char * *in, long len); int i2d_NETSCAPE_CERT_SEQUENCE(NETSCAPE_CERT_SEQUENCE *a, unsigned char * *out); extern const ASN1_ITEM NETSCAPE_CERT_SEQUENCE_it; X509_INFO *X509_INFO_new(void); void X509_INFO_free(X509_INFO *a); char *X509_NAME_oneline(X509_NAME *a, char *buf, int size); int ASN1_verify(i2d_of_void *i2d, X509_ALGOR *algor1, ASN1_BIT_STRING *signature, char *data, EVP_PKEY *pkey); int ASN1_digest(i2d_of_void *i2d, const EVP_MD *type, char *data, unsigned char *md, unsigned int *len); int ASN1_sign(i2d_of_void *i2d, X509_ALGOR *algor1, X509_ALGOR *algor2, ASN1_BIT_STRING *signature, char *data, EVP_PKEY *pkey, const EVP_MD *type); int ASN1_item_digest(const ASN1_ITEM *it, const EVP_MD *type, void *data, unsigned char *md, unsigned int *len); int ASN1_item_verify(const ASN1_ITEM *it, X509_ALGOR *algor1, ASN1_BIT_STRING *signature, void *data, EVP_PKEY *pkey); int ASN1_item_sign(const ASN1_ITEM *it, X509_ALGOR *algor1, X509_ALGOR *algor2, ASN1_BIT_STRING *signature, void *data, EVP_PKEY *pkey, const EVP_MD *type); int X509_set_version(X509 *x, long version); int X509_set_serialNumber(X509 *x, ASN1_INTEGER *serial); ASN1_INTEGER *X509_get_serialNumber(X509 *x); int X509_set_issuer_name(X509 *x, X509_NAME *name); X509_NAME *X509_get_issuer_name(X509 *a); int X509_set_subject_name(X509 *x, X509_NAME *name); X509_NAME *X509_get_subject_name(X509 *a); int X509_set_notBefore(X509 *x, ASN1_TIME *tm); int X509_set_notAfter(X509 *x, ASN1_TIME *tm); int X509_set_pubkey(X509 *x, EVP_PKEY *pkey); EVP_PKEY *X509_get_pubkey(X509 *x); ASN1_BIT_STRING *X509_get0_pubkey_bitstr(const X509 *x); int X509_certificate_type(X509 *x, EVP_PKEY *pubkey ); int X509_REQ_set_version(X509_REQ *x, long version); int X509_REQ_set_subject_name(X509_REQ *req, X509_NAME *name); int X509_REQ_set_pubkey(X509_REQ *x, EVP_PKEY *pkey); EVP_PKEY *X509_REQ_get_pubkey(X509_REQ *req); int X509_REQ_extension_nid(int nid); int *X509_REQ_get_extension_nids(void); void X509_REQ_set_extension_nids(int *nids); STACK *X509_REQ_get_extensions(X509_REQ *req); int X509_REQ_add_extensions_nid(X509_REQ *req, STACK *exts, int nid); int X509_REQ_add_extensions(X509_REQ *req, STACK *exts); int X509_REQ_get_attr_count(const X509_REQ *req); int X509_REQ_get_attr_by_NID(const X509_REQ *req, int nid, int lastpos); int X509_REQ_get_attr_by_OBJ(const X509_REQ *req, ASN1_OBJECT *obj, int lastpos); X509_ATTRIBUTE *X509_REQ_get_attr(const X509_REQ *req, int loc); X509_ATTRIBUTE *X509_REQ_delete_attr(X509_REQ *req, int loc); int X509_REQ_add1_attr(X509_REQ *req, X509_ATTRIBUTE *attr); int X509_REQ_add1_attr_by_OBJ(X509_REQ *req, const ASN1_OBJECT *obj, int type, const unsigned char *bytes, int len); int X509_REQ_add1_attr_by_NID(X509_REQ *req, int nid, int type, const unsigned char *bytes, int len); int X509_REQ_add1_attr_by_txt(X509_REQ *req, const char *attrname, int type, const unsigned char *bytes, int len); int X509_CRL_set_version(X509_CRL *x, long version); int X509_CRL_set_issuer_name(X509_CRL *x, X509_NAME *name); int X509_CRL_set_lastUpdate(X509_CRL *x, ASN1_TIME *tm); int X509_CRL_set_nextUpdate(X509_CRL *x, ASN1_TIME *tm); int X509_CRL_sort(X509_CRL *crl); int X509_REVOKED_set_serialNumber(X509_REVOKED *x, ASN1_INTEGER *serial); int X509_REVOKED_set_revocationDate(X509_REVOKED *r, ASN1_TIME *tm); int X509_REQ_check_private_key(X509_REQ *x509, EVP_PKEY *pkey); int X509_check_private_key(X509 *x509, EVP_PKEY *pkey); int X509_issuer_and_serial_cmp(const X509 *a, const X509 *b); unsigned long X509_issuer_and_serial_hash(X509 *a); int X509_issuer_name_cmp(const X509 *a, const X509 *b); unsigned long X509_issuer_name_hash(X509 *a); int X509_subject_name_cmp(const X509 *a, const X509 *b); unsigned long X509_subject_name_hash(X509 *x); int X509_cmp(const X509 *a, const X509 *b); int X509_NAME_cmp(const X509_NAME *a, const X509_NAME *b); unsigned long X509_NAME_hash(X509_NAME *x); int X509_CRL_cmp(const X509_CRL *a, const X509_CRL *b); int X509_print_ex_fp(FILE *bp, X509 *x, unsigned long nmflag, unsigned long cflag); int X509_print_fp(FILE *bp, X509 *x); int X509_CRL_print_fp(FILE *bp, X509_CRL *x); int X509_REQ_print_fp(FILE *bp, X509_REQ *req); int X509_NAME_print_ex_fp(FILE *fp, X509_NAME *nm, int indent, unsigned long flags); int X509_NAME_print(BIO *bp, X509_NAME *name, int obase); int X509_NAME_print_ex(BIO *out, X509_NAME *nm, int indent, unsigned long flags); int X509_print_ex(BIO *bp, X509 *x, unsigned long nmflag, unsigned long cflag); int X509_print(BIO *bp, X509 *x); int X509_ocspid_print(BIO *bp, X509 *x); int X509_CERT_AUX_print(BIO *bp, X509_CERT_AUX *x, int indent); int X509_CRL_print(BIO *bp, X509_CRL *x); int X509_REQ_print_ex(BIO *bp, X509_REQ *x, unsigned long nmflag, unsigned long cflag); int X509_REQ_print(BIO *bp, X509_REQ *req); int X509_NAME_entry_count(X509_NAME *name); int X509_NAME_get_text_by_NID(X509_NAME *name, int nid, char *buf, int len); int X509_NAME_get_text_by_OBJ(X509_NAME *name, ASN1_OBJECT *obj, char *buf, int len); int X509_NAME_get_index_by_NID(X509_NAME *name, int nid, int lastpos); int X509_NAME_get_index_by_OBJ(X509_NAME *name, ASN1_OBJECT *obj, int lastpos); X509_NAME_ENTRY *X509_NAME_get_entry(X509_NAME *name, int loc); X509_NAME_ENTRY *X509_NAME_delete_entry(X509_NAME *name, int loc); int X509_NAME_add_entry(X509_NAME *name, X509_NAME_ENTRY *ne, int loc, int set); int X509_NAME_add_entry_by_OBJ(X509_NAME *name, ASN1_OBJECT *obj, int type, unsigned char *bytes, int len, int loc, int set); int X509_NAME_add_entry_by_NID(X509_NAME *name, int nid, int type, unsigned char *bytes, int len, int loc, int set); X509_NAME_ENTRY *X509_NAME_ENTRY_create_by_txt(X509_NAME_ENTRY **ne, const char *field, int type, const unsigned char *bytes, int len); X509_NAME_ENTRY *X509_NAME_ENTRY_create_by_NID(X509_NAME_ENTRY **ne, int nid, int type, unsigned char *bytes, int len); int X509_NAME_add_entry_by_txt(X509_NAME *name, const char *field, int type, const unsigned char *bytes, int len, int loc, int set); X509_NAME_ENTRY *X509_NAME_ENTRY_create_by_OBJ(X509_NAME_ENTRY **ne, ASN1_OBJECT *obj, int type, const unsigned char *bytes, int len); int X509_NAME_ENTRY_set_object(X509_NAME_ENTRY *ne, ASN1_OBJECT *obj); int X509_NAME_ENTRY_set_data(X509_NAME_ENTRY *ne, int type, const unsigned char *bytes, int len); ASN1_OBJECT *X509_NAME_ENTRY_get_object(X509_NAME_ENTRY *ne); ASN1_STRING *X509_NAME_ENTRY_get_data(X509_NAME_ENTRY *ne); int X509v3_get_ext_count(const STACK *x); int X509v3_get_ext_by_NID(const STACK *x, int nid, int lastpos); int X509v3_get_ext_by_OBJ(const STACK *x, ASN1_OBJECT *obj, int lastpos); int X509v3_get_ext_by_critical(const STACK *x, int crit, int lastpos); X509_EXTENSION *X509v3_get_ext(const STACK *x, int loc); X509_EXTENSION *X509v3_delete_ext(STACK *x, int loc); STACK *X509v3_add_ext(STACK **x, X509_EXTENSION *ex, int loc); int X509_get_ext_count(X509 *x); int X509_get_ext_by_NID(X509 *x, int nid, int lastpos); int X509_get_ext_by_OBJ(X509 *x, ASN1_OBJECT *obj, int lastpos); int X509_get_ext_by_critical(X509 *x, int crit, int lastpos); X509_EXTENSION *X509_get_ext(X509 *x, int loc); X509_EXTENSION *X509_delete_ext(X509 *x, int loc); int X509_add_ext(X509 *x, X509_EXTENSION *ex, int loc); void *X509_get_ext_d2i(X509 *x, int nid, int *crit, int *idx); int X509_add1_ext_i2d(X509 *x, int nid, void *value, int crit, unsigned long flags); int X509_CRL_get_ext_count(X509_CRL *x); int X509_CRL_get_ext_by_NID(X509_CRL *x, int nid, int lastpos); int X509_CRL_get_ext_by_OBJ(X509_CRL *x, ASN1_OBJECT *obj, int lastpos); int X509_CRL_get_ext_by_critical(X509_CRL *x, int crit, int lastpos); X509_EXTENSION *X509_CRL_get_ext(X509_CRL *x, int loc); X509_EXTENSION *X509_CRL_delete_ext(X509_CRL *x, int loc); int X509_CRL_add_ext(X509_CRL *x, X509_EXTENSION *ex, int loc); void *X509_CRL_get_ext_d2i(X509_CRL *x, int nid, int *crit, int *idx); int X509_CRL_add1_ext_i2d(X509_CRL *x, int nid, void *value, int crit, unsigned long flags); int X509_REVOKED_get_ext_count(X509_REVOKED *x); int X509_REVOKED_get_ext_by_NID(X509_REVOKED *x, int nid, int lastpos); int X509_REVOKED_get_ext_by_OBJ(X509_REVOKED *x, ASN1_OBJECT *obj, int lastpos); int X509_REVOKED_get_ext_by_critical(X509_REVOKED *x, int crit, int lastpos); X509_EXTENSION *X509_REVOKED_get_ext(X509_REVOKED *x, int loc); X509_EXTENSION *X509_REVOKED_delete_ext(X509_REVOKED *x, int loc); int X509_REVOKED_add_ext(X509_REVOKED *x, X509_EXTENSION *ex, int loc); void *X509_REVOKED_get_ext_d2i(X509_REVOKED *x, int nid, int *crit, int *idx); int X509_REVOKED_add1_ext_i2d(X509_REVOKED *x, int nid, void *value, int crit, unsigned long flags); X509_EXTENSION *X509_EXTENSION_create_by_NID(X509_EXTENSION **ex, int nid, int crit, ASN1_OCTET_STRING *data); X509_EXTENSION *X509_EXTENSION_create_by_OBJ(X509_EXTENSION **ex, ASN1_OBJECT *obj, int crit, ASN1_OCTET_STRING *data); int X509_EXTENSION_set_object(X509_EXTENSION *ex, ASN1_OBJECT *obj); int X509_EXTENSION_set_critical(X509_EXTENSION *ex, int crit); int X509_EXTENSION_set_data(X509_EXTENSION *ex, ASN1_OCTET_STRING *data); ASN1_OBJECT *X509_EXTENSION_get_object(X509_EXTENSION *ex); ASN1_OCTET_STRING *X509_EXTENSION_get_data(X509_EXTENSION *ne); int X509_EXTENSION_get_critical(X509_EXTENSION *ex); int X509at_get_attr_count(const STACK *x); int X509at_get_attr_by_NID(const STACK *x, int nid, int lastpos); int X509at_get_attr_by_OBJ(const STACK *sk, ASN1_OBJECT *obj, int lastpos); X509_ATTRIBUTE *X509at_get_attr(const STACK *x, int loc); X509_ATTRIBUTE *X509at_delete_attr(STACK *x, int loc); STACK *X509at_add1_attr(STACK **x, X509_ATTRIBUTE *attr); STACK *X509at_add1_attr_by_OBJ(STACK **x, const ASN1_OBJECT *obj, int type, const unsigned char *bytes, int len); STACK *X509at_add1_attr_by_NID(STACK **x, int nid, int type, const unsigned char *bytes, int len); STACK *X509at_add1_attr_by_txt(STACK **x, const char *attrname, int type, const unsigned char *bytes, int len); void *X509at_get0_data_by_OBJ(STACK *x, ASN1_OBJECT *obj, int lastpos, int type); X509_ATTRIBUTE *X509_ATTRIBUTE_create_by_NID(X509_ATTRIBUTE **attr, int nid, int atrtype, const void *data, int len); X509_ATTRIBUTE *X509_ATTRIBUTE_create_by_OBJ(X509_ATTRIBUTE **attr, const ASN1_OBJECT *obj, int atrtype, const void *data, int len); X509_ATTRIBUTE *X509_ATTRIBUTE_create_by_txt(X509_ATTRIBUTE **attr, const char *atrname, int type, const unsigned char *bytes, int len); int X509_ATTRIBUTE_set1_object(X509_ATTRIBUTE *attr, const ASN1_OBJECT *obj); int X509_ATTRIBUTE_set1_data(X509_ATTRIBUTE *attr, int attrtype, const void *data, int len); void *X509_ATTRIBUTE_get0_data(X509_ATTRIBUTE *attr, int idx, int atrtype, void *data); int X509_ATTRIBUTE_count(X509_ATTRIBUTE *attr); ASN1_OBJECT *X509_ATTRIBUTE_get0_object(X509_ATTRIBUTE *attr); ASN1_TYPE *X509_ATTRIBUTE_get0_type(X509_ATTRIBUTE *attr, int idx); int EVP_PKEY_get_attr_count(const EVP_PKEY *key); int EVP_PKEY_get_attr_by_NID(const EVP_PKEY *key, int nid, int lastpos); int EVP_PKEY_get_attr_by_OBJ(const EVP_PKEY *key, ASN1_OBJECT *obj, int lastpos); X509_ATTRIBUTE *EVP_PKEY_get_attr(const EVP_PKEY *key, int loc); X509_ATTRIBUTE *EVP_PKEY_delete_attr(EVP_PKEY *key, int loc); int EVP_PKEY_add1_attr(EVP_PKEY *key, X509_ATTRIBUTE *attr); int EVP_PKEY_add1_attr_by_OBJ(EVP_PKEY *key, const ASN1_OBJECT *obj, int type, const unsigned char *bytes, int len); int EVP_PKEY_add1_attr_by_NID(EVP_PKEY *key, int nid, int type, const unsigned char *bytes, int len); int EVP_PKEY_add1_attr_by_txt(EVP_PKEY *key, const char *attrname, int type, const unsigned char *bytes, int len); int X509_verify_cert(X509_STORE_CTX *ctx); X509 *X509_find_by_issuer_and_serial(STACK *sk, X509_NAME *name, ASN1_INTEGER *serial); X509 *X509_find_by_subject(STACK *sk, X509_NAME *name); PBEPARAM *PBEPARAM_new(void); void PBEPARAM_free(PBEPARAM *a); PBEPARAM *d2i_PBEPARAM(PBEPARAM * *a, const unsigned char * *in, long len); int i2d_PBEPARAM(PBEPARAM *a, unsigned char * *out); extern const ASN1_ITEM PBEPARAM_it; PBE2PARAM *PBE2PARAM_new(void); void PBE2PARAM_free(PBE2PARAM *a); PBE2PARAM *d2i_PBE2PARAM(PBE2PARAM * *a, const unsigned char * *in, long len); int i2d_PBE2PARAM(PBE2PARAM *a, unsigned char * *out); extern const ASN1_ITEM PBE2PARAM_it; PBKDF2PARAM *PBKDF2PARAM_new(void); void PBKDF2PARAM_free(PBKDF2PARAM *a); PBKDF2PARAM *d2i_PBKDF2PARAM(PBKDF2PARAM * *a, const unsigned char * *in, long len); int i2d_PBKDF2PARAM(PBKDF2PARAM *a, unsigned char * *out); extern const ASN1_ITEM PBKDF2PARAM_it; X509_ALGOR *PKCS5_pbe_set(int alg, int iter, unsigned char *salt, int saltlen); X509_ALGOR *PKCS5_pbe2_set(const EVP_CIPHER *cipher, int iter, unsigned char *salt, int saltlen); PKCS8_PRIV_KEY_INFO *PKCS8_PRIV_KEY_INFO_new(void); void PKCS8_PRIV_KEY_INFO_free(PKCS8_PRIV_KEY_INFO *a); PKCS8_PRIV_KEY_INFO *d2i_PKCS8_PRIV_KEY_INFO(PKCS8_PRIV_KEY_INFO * *a, const unsigned char * *in, long len); int i2d_PKCS8_PRIV_KEY_INFO(PKCS8_PRIV_KEY_INFO *a, unsigned char * *out); extern const ASN1_ITEM PKCS8_PRIV_KEY_INFO_it; EVP_PKEY *EVP_PKCS82PKEY(PKCS8_PRIV_KEY_INFO *p8); PKCS8_PRIV_KEY_INFO *EVP_PKEY2PKCS8(EVP_PKEY *pkey); PKCS8_PRIV_KEY_INFO *EVP_PKEY2PKCS8_broken(EVP_PKEY *pkey, int broken); PKCS8_PRIV_KEY_INFO *PKCS8_set_broken(PKCS8_PRIV_KEY_INFO *p8, int broken); int X509_check_trust(X509 *x, int id, int flags); int X509_TRUST_get_count(void); X509_TRUST *X509_TRUST_get0(int idx); int X509_TRUST_get_by_id(int id); int X509_TRUST_add(int id, int flags, int (*ck) (X509_TRUST *, X509 *, int), char *name, int arg1, void *arg2); void X509_TRUST_cleanup(void); int X509_TRUST_get_flags(X509_TRUST *xp); char *X509_TRUST_get0_name(X509_TRUST *xp); int X509_TRUST_get_trust(X509_TRUST *xp); void ERR_load_X509_strings(void); #line 1308 "/usr/include/openssl/x509.h" #line 1333 "/usr/include/openssl/x509.h" #line 184 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/pem.h" #line 1 "/usr/include/openssl/e_os2.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 57 "/usr/include/openssl/e_os2.h" #line 63 "/usr/include/openssl/pem.h" #line 1 "/usr/include/openssl/pem2.h" #line 72 "/usr/include/openssl/pem.h" #line 97 "/usr/include/openssl/pem.h" #line 106 "/usr/include/openssl/pem.h" #line 113 "/usr/include/openssl/pem.h" #line 138 "/usr/include/openssl/pem.h" typedef struct PEM_Encode_Seal_st { EVP_ENCODE_CTX encode; EVP_MD_CTX md; EVP_CIPHER_CTX cipher; } PEM_ENCODE_SEAL_CTX; typedef struct pem_recip_st { char *name; X509_NAME *dn; int cipher; int key_enc; } PEM_USER; typedef struct pem_ctx_st { int type; struct { int version; int mode; } proc_type; char *domain; struct { int cipher; } DEK_info; PEM_USER *originator; int num_recipient; PEM_USER **recipient; STACK *x509_chain; EVP_MD *md; int md_enc; int md_len; char *md_data; EVP_CIPHER *dec; int key_len; unsigned char *key; int data_enc; int data_len; unsigned char *data; } PEM_CTX; #line 221 "/usr/include/openssl/pem.h" #line 230 "/usr/include/openssl/pem.h" #line 239 "/usr/include/openssl/pem.h" #line 248 "/usr/include/openssl/pem.h" #line 259 "/usr/include/openssl/pem.h" #line 270 "/usr/include/openssl/pem.h" #line 281 "/usr/include/openssl/pem.h" #line 290 "/usr/include/openssl/pem.h" #line 299 "/usr/include/openssl/pem.h" #line 309 "/usr/include/openssl/pem.h" #line 319 "/usr/include/openssl/pem.h" #line 361 "/usr/include/openssl/pem.h" #line 541 "/usr/include/openssl/pem.h" typedef int pem_password_cb (char *buf, int size, int rwflag, void *userdata); int PEM_get_EVP_CIPHER_INFO(char *header, EVP_CIPHER_INFO *cipher); int PEM_do_header(EVP_CIPHER_INFO *cipher, unsigned char *data, long *len, pem_password_cb *callback, void *u); int PEM_read_bio(BIO *bp, char **name, char **header, unsigned char **data, long *len); int PEM_write_bio(BIO *bp, const char *name, char *hdr, unsigned char *data, long len); int PEM_bytes_read_bio(unsigned char **pdata, long *plen, char **pnm, const char *name, BIO *bp, pem_password_cb *cb, void *u); void *PEM_ASN1_read_bio(d2i_of_void *d2i, const char *name, BIO *bp, void **x, pem_password_cb *cb, void *u); int PEM_ASN1_write_bio(i2d_of_void *i2d, const char *name, BIO *bp, char *x, const EVP_CIPHER *enc, unsigned char *kstr, int klen, pem_password_cb *cb, void *u); STACK *PEM_X509_INFO_read_bio(BIO *bp, STACK *sk, pem_password_cb *cb, void *u); int PEM_X509_INFO_write_bio(BIO *bp, X509_INFO *xi, EVP_CIPHER *enc, unsigned char *kstr, int klen, pem_password_cb *cd, void *u); int PEM_read(FILE *fp, char **name, char **header, unsigned char **data, long *len); int PEM_write(FILE *fp, char *name, char *hdr, unsigned char *data, long len); void *PEM_ASN1_read(d2i_of_void *d2i, const char *name, FILE *fp, void **x, pem_password_cb *cb, void *u); int PEM_ASN1_write(i2d_of_void *i2d, const char *name, FILE *fp, char *x, const EVP_CIPHER *enc, unsigned char *kstr, int klen, pem_password_cb *callback, void *u); STACK *PEM_X509_INFO_read(FILE *fp, STACK *sk, pem_password_cb *cb, void *u); int PEM_SealInit(PEM_ENCODE_SEAL_CTX *ctx, EVP_CIPHER *type, EVP_MD *md_type, unsigned char **ek, int *ekl, unsigned char *iv, EVP_PKEY **pubk, int npubk); void PEM_SealUpdate(PEM_ENCODE_SEAL_CTX *ctx, unsigned char *out, int *outl, unsigned char *in, int inl); int PEM_SealFinal(PEM_ENCODE_SEAL_CTX *ctx, unsigned char *sig, int *sigl, unsigned char *out, int *outl, EVP_PKEY *priv); void PEM_SignInit(EVP_MD_CTX *ctx, EVP_MD *type); void PEM_SignUpdate(EVP_MD_CTX *ctx, unsigned char *d, unsigned int cnt); int PEM_SignFinal(EVP_MD_CTX *ctx, unsigned char *sigret, unsigned int *siglen, EVP_PKEY *pkey); int PEM_def_callback(char *buf, int num, int w, void *key); void PEM_proc_type(char *buf, int type); void PEM_dek_info(char *buf, const char *type, int len, char *str); #line 1 "/usr/include/openssl/symhacks.h" #line 436 "/usr/include/openssl/symhacks.h" #line 619 "/usr/include/openssl/pem.h" X509 *PEM_read_bio_X509(BIO *bp, X509 * *x, pem_password_cb *cb, void *u); X509 *PEM_read_X509(FILE *fp, X509 * *x, pem_password_cb *cb, void *u); int PEM_write_bio_X509(BIO *bp, X509 *x); int PEM_write_X509(FILE *fp, X509 *x); X509 *PEM_read_bio_X509_AUX(BIO *bp, X509 * *x, pem_password_cb *cb, void *u); X509 *PEM_read_X509_AUX(FILE *fp, X509 * *x, pem_password_cb *cb, void *u); int PEM_write_bio_X509_AUX(BIO *bp, X509 *x); int PEM_write_X509_AUX(FILE *fp, X509 *x); X509_CERT_PAIR *PEM_read_bio_X509_CERT_PAIR(BIO *bp, X509_CERT_PAIR * *x, pem_password_cb *cb, void *u); X509_CERT_PAIR *PEM_read_X509_CERT_PAIR(FILE *fp, X509_CERT_PAIR * *x, pem_password_cb *cb, void *u); int PEM_write_bio_X509_CERT_PAIR(BIO *bp, X509_CERT_PAIR *x); int PEM_write_X509_CERT_PAIR(FILE *fp, X509_CERT_PAIR *x); X509_REQ *PEM_read_bio_X509_REQ(BIO *bp, X509_REQ * *x, pem_password_cb *cb, void *u); X509_REQ *PEM_read_X509_REQ(FILE *fp, X509_REQ * *x, pem_password_cb *cb, void *u); int PEM_write_bio_X509_REQ(BIO *bp, X509_REQ *x); int PEM_write_X509_REQ(FILE *fp, X509_REQ *x); int PEM_write_bio_X509_REQ_NEW(BIO *bp, X509_REQ *x); int PEM_write_X509_REQ_NEW(FILE *fp, X509_REQ *x); X509_CRL *PEM_read_bio_X509_CRL(BIO *bp, X509_CRL * *x, pem_password_cb *cb, void *u); X509_CRL *PEM_read_X509_CRL(FILE *fp, X509_CRL * *x, pem_password_cb *cb, void *u); int PEM_write_bio_X509_CRL(BIO *bp, X509_CRL *x); int PEM_write_X509_CRL(FILE *fp, X509_CRL *x); PKCS7 *PEM_read_bio_PKCS7(BIO *bp, PKCS7 * *x, pem_password_cb *cb, void *u); PKCS7 *PEM_read_PKCS7(FILE *fp, PKCS7 * *x, pem_password_cb *cb, void *u); int PEM_write_bio_PKCS7(BIO *bp, PKCS7 *x); int PEM_write_PKCS7(FILE *fp, PKCS7 *x); NETSCAPE_CERT_SEQUENCE *PEM_read_bio_NETSCAPE_CERT_SEQUENCE(BIO *bp, NETSCAPE_CERT_SEQUENCE * *x, pem_password_cb *cb, void *u); NETSCAPE_CERT_SEQUENCE *PEM_read_NETSCAPE_CERT_SEQUENCE(FILE *fp, NETSCAPE_CERT_SEQUENCE * *x, pem_password_cb *cb, void *u); int PEM_write_bio_NETSCAPE_CERT_SEQUENCE(BIO *bp, NETSCAPE_CERT_SEQUENCE *x); int PEM_write_NETSCAPE_CERT_SEQUENCE(FILE *fp, NETSCAPE_CERT_SEQUENCE *x); X509_SIG *PEM_read_bio_PKCS8(BIO *bp, X509_SIG * *x, pem_password_cb *cb, void *u); X509_SIG *PEM_read_PKCS8(FILE *fp, X509_SIG * *x, pem_password_cb *cb, void *u); int PEM_write_bio_PKCS8(BIO *bp, X509_SIG *x); int PEM_write_PKCS8(FILE *fp, X509_SIG *x); PKCS8_PRIV_KEY_INFO *PEM_read_bio_PKCS8_PRIV_KEY_INFO(BIO *bp, PKCS8_PRIV_KEY_INFO * *x, pem_password_cb *cb, void *u); PKCS8_PRIV_KEY_INFO *PEM_read_PKCS8_PRIV_KEY_INFO(FILE *fp, PKCS8_PRIV_KEY_INFO * *x, pem_password_cb *cb, void *u); int PEM_write_bio_PKCS8_PRIV_KEY_INFO(BIO *bp, PKCS8_PRIV_KEY_INFO *x); int PEM_write_PKCS8_PRIV_KEY_INFO(FILE *fp, PKCS8_PRIV_KEY_INFO *x); RSA *PEM_read_bio_RSAPrivateKey(BIO *bp, RSA * *x, pem_password_cb *cb, void *u); RSA *PEM_read_RSAPrivateKey(FILE *fp, RSA * *x, pem_password_cb *cb, void *u); int PEM_write_bio_RSAPrivateKey(BIO *bp, RSA *x, const EVP_CIPHER *enc, unsigned char *kstr, int klen, pem_password_cb *cb, void *u); int PEM_write_RSAPrivateKey(FILE *fp, RSA *x, const EVP_CIPHER *enc, unsigned char *kstr, int klen, pem_password_cb *cb, void *u); RSA *PEM_read_bio_RSAPublicKey(BIO *bp, RSA * *x, pem_password_cb *cb, void *u); RSA *PEM_read_RSAPublicKey(FILE *fp, RSA * *x, pem_password_cb *cb, void *u); int PEM_write_bio_RSAPublicKey(BIO *bp, const RSA *x); int PEM_write_RSAPublicKey(FILE *fp, const RSA *x); RSA *PEM_read_bio_RSA_PUBKEY(BIO *bp, RSA * *x, pem_password_cb *cb, void *u); RSA *PEM_read_RSA_PUBKEY(FILE *fp, RSA * *x, pem_password_cb *cb, void *u); int PEM_write_bio_RSA_PUBKEY(BIO *bp, RSA *x); int PEM_write_RSA_PUBKEY(FILE *fp, RSA *x); DSA *PEM_read_bio_DSAPrivateKey(BIO *bp, DSA * *x, pem_password_cb *cb, void *u); DSA *PEM_read_DSAPrivateKey(FILE *fp, DSA * *x, pem_password_cb *cb, void *u); int PEM_write_bio_DSAPrivateKey(BIO *bp, DSA *x, const EVP_CIPHER *enc, unsigned char *kstr, int klen, pem_password_cb *cb, void *u); int PEM_write_DSAPrivateKey(FILE *fp, DSA *x, const EVP_CIPHER *enc, unsigned char *kstr, int klen, pem_password_cb *cb, void *u); DSA *PEM_read_bio_DSA_PUBKEY(BIO *bp, DSA * *x, pem_password_cb *cb, void *u); DSA *PEM_read_DSA_PUBKEY(FILE *fp, DSA * *x, pem_password_cb *cb, void *u); int PEM_write_bio_DSA_PUBKEY(BIO *bp, DSA *x); int PEM_write_DSA_PUBKEY(FILE *fp, DSA *x); DSA *PEM_read_bio_DSAparams(BIO *bp, DSA * *x, pem_password_cb *cb, void *u); DSA *PEM_read_DSAparams(FILE *fp, DSA * *x, pem_password_cb *cb, void *u); int PEM_write_bio_DSAparams(BIO *bp, const DSA *x); int PEM_write_DSAparams(FILE *fp, const DSA *x); DH *PEM_read_bio_DHparams(BIO *bp, DH * *x, pem_password_cb *cb, void *u); DH *PEM_read_DHparams(FILE *fp, DH * *x, pem_password_cb *cb, void *u); int PEM_write_bio_DHparams(BIO *bp, const DH *x); int PEM_write_DHparams(FILE *fp, const DH *x); EVP_PKEY *PEM_read_bio_PrivateKey(BIO *bp, EVP_PKEY * *x, pem_password_cb *cb, void *u); EVP_PKEY *PEM_read_PrivateKey(FILE *fp, EVP_PKEY * *x, pem_password_cb *cb, void *u); int PEM_write_bio_PrivateKey(BIO *bp, EVP_PKEY *x, const EVP_CIPHER *enc, unsigned char *kstr, int klen, pem_password_cb *cb, void *u); int PEM_write_PrivateKey(FILE *fp, EVP_PKEY *x, const EVP_CIPHER *enc, unsigned char *kstr, int klen, pem_password_cb *cb, void *u); EVP_PKEY *PEM_read_bio_PUBKEY(BIO *bp, EVP_PKEY * *x, pem_password_cb *cb, void *u); EVP_PKEY *PEM_read_PUBKEY(FILE *fp, EVP_PKEY * *x, pem_password_cb *cb, void *u); int PEM_write_bio_PUBKEY(BIO *bp, EVP_PKEY *x); int PEM_write_PUBKEY(FILE *fp, EVP_PKEY *x); int PEM_write_bio_PKCS8PrivateKey_nid(BIO *bp, EVP_PKEY *x, int nid, char *kstr, int klen, pem_password_cb *cb, void *u); int PEM_write_bio_PKCS8PrivateKey(BIO *, EVP_PKEY *, const EVP_CIPHER *, char *, int, pem_password_cb *, void *); int i2d_PKCS8PrivateKey_bio(BIO *bp, EVP_PKEY *x, const EVP_CIPHER *enc, char *kstr, int klen, pem_password_cb *cb, void *u); int i2d_PKCS8PrivateKey_nid_bio(BIO *bp, EVP_PKEY *x, int nid, char *kstr, int klen, pem_password_cb *cb, void *u); EVP_PKEY *d2i_PKCS8PrivateKey_bio(BIO *bp, EVP_PKEY **x, pem_password_cb *cb, void *u); int i2d_PKCS8PrivateKey_fp(FILE *fp, EVP_PKEY *x, const EVP_CIPHER *enc, char *kstr, int klen, pem_password_cb *cb, void *u); int i2d_PKCS8PrivateKey_nid_fp(FILE *fp, EVP_PKEY *x, int nid, char *kstr, int klen, pem_password_cb *cb, void *u); int PEM_write_PKCS8PrivateKey_nid(FILE *fp, EVP_PKEY *x, int nid, char *kstr, int klen, pem_password_cb *cb, void *u); EVP_PKEY *d2i_PKCS8PrivateKey_fp(FILE *fp, EVP_PKEY **x, pem_password_cb *cb, void *u); int PEM_write_PKCS8PrivateKey(FILE *fp, EVP_PKEY *x, const EVP_CIPHER *enc, char *kstr, int klen, pem_password_cb *cd, void *u); void ERR_load_PEM_strings(void); #line 715 "/usr/include/openssl/pem.h" #line 733 "/usr/include/openssl/pem.h" #line 190 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/hmac.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 62 "/usr/include/openssl/hmac.h" typedef struct hmac_ctx_st { const EVP_MD *md; EVP_MD_CTX md_ctx; EVP_MD_CTX i_ctx; EVP_MD_CTX o_ctx; unsigned int key_length; unsigned char key[128]; } HMAC_CTX; void HMAC_CTX_init(HMAC_CTX *ctx); void HMAC_CTX_cleanup(HMAC_CTX *ctx); void HMAC_Init(HMAC_CTX *ctx, const void *key, int len, const EVP_MD *md); void HMAC_Init_ex(HMAC_CTX *ctx, const void *key, int len, const EVP_MD *md, ENGINE *impl); void HMAC_Update(HMAC_CTX *ctx, const unsigned char *data, size_t len); void HMAC_Final(HMAC_CTX *ctx, unsigned char *md, unsigned int *len); unsigned char *HMAC(const EVP_MD *evp_md, const void *key, int key_len, const unsigned char *d, size_t n, unsigned char *md, unsigned int *md_len); void HMAC_CTX_set_flags(HMAC_CTX *ctx, unsigned long flags); #line 191 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/kssl.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 68 "/usr/include/openssl/kssl.h" #line 193 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/symhacks.h" #line 436 "/usr/include/openssl/symhacks.h" #line 195 "/usr/include/openssl/ssl.h" #line 218 "/usr/include/openssl/ssl.h" #line 230 "/usr/include/openssl/ssl.h" #line 237 "/usr/include/openssl/ssl.h" #line 245 "/usr/include/openssl/ssl.h" #line 262 "/usr/include/openssl/ssl.h" #line 304 "/usr/include/openssl/ssl.h" typedef struct ssl_st *ssl_crock_st; typedef struct tls_session_ticket_ext_st TLS_SESSION_TICKET_EXT; typedef struct ssl_cipher_st { int valid; const char *name; unsigned long id; unsigned long algorithms; unsigned long algo_strength; unsigned long algorithm2; int strength_bits; int alg_bits; unsigned long mask; unsigned long mask_strength; } SSL_CIPHER; typedef int (*tls_session_ticket_ext_cb_fn)(SSL *s, const unsigned char *data, int len, void *arg); typedef int (*tls_session_secret_cb_fn)(SSL *s, void *secret, int *secret_len, STACK *peer_ciphers, SSL_CIPHER **cipher, void *arg); typedef struct ssl_method_st { int version; int (*ssl_new) (SSL *s); void (*ssl_clear) (SSL *s); void (*ssl_free) (SSL *s); int (*ssl_accept) (SSL *s); int (*ssl_connect) (SSL *s); int (*ssl_read) (SSL *s, void *buf, int len); int (*ssl_peek) (SSL *s, void *buf, int len); int (*ssl_write) (SSL *s, const void *buf, int len); int (*ssl_shutdown) (SSL *s); int (*ssl_renegotiate) (SSL *s); int (*ssl_renegotiate_check) (SSL *s); long (*ssl_get_message) (SSL *s, int st1, int stn, int mt, long max, int *ok); int (*ssl_read_bytes) (SSL *s, int type, unsigned char *buf, int len, int peek); int (*ssl_write_bytes) (SSL *s, int type, const void *buf_, int len); int (*ssl_dispatch_alert) (SSL *s); long (*ssl_ctrl) (SSL *s, int cmd, long larg, void *parg); long (*ssl_ctx_ctrl) (SSL_CTX *ctx, int cmd, long larg, void *parg); SSL_CIPHER *(*get_cipher_by_char) (const unsigned char *ptr); int (*put_cipher_by_char) (const SSL_CIPHER *cipher, unsigned char *ptr); int (*ssl_pending) (const SSL *s); int (*num_ciphers) (void); SSL_CIPHER *(*get_cipher) (unsigned ncipher); struct ssl_method_st *(*get_ssl_method) (int version); long (*get_timeout) (void); struct ssl3_enc_method *ssl3_enc; int (*ssl_version) (void); long (*ssl_callback_ctrl) (SSL *s, int cb_id, void (*fp) (void)); long (*ssl_ctx_callback_ctrl) (SSL_CTX *s, int cb_id, void (*fp) (void)); } SSL_METHOD; typedef struct ssl_session_st { int ssl_version; unsigned int key_arg_length; unsigned char key_arg[8]; int master_key_length; unsigned char master_key[48]; unsigned int session_id_length; unsigned char session_id[32]; unsigned int sid_ctx_length; unsigned char sid_ctx[32]; int not_resumable; struct sess_cert_st *sess_cert; X509 *peer; long verify_result; int references; long timeout; long time; int compress_meth; SSL_CIPHER *cipher; unsigned long cipher_id; STACK *ciphers; CRYPTO_EX_DATA ex_data; struct ssl_session_st *prev, *next; char *tlsext_hostname; unsigned char *tlsext_tick; size_t tlsext_ticklen; long tlsext_tick_lifetime_hint; } SSL_SESSION; #line 499 "/usr/include/openssl/ssl.h" #line 608 "/usr/include/openssl/ssl.h" #line 623 "/usr/include/openssl/ssl.h" void SSL_CTX_set_msg_callback(SSL_CTX *ctx, void (*cb) (int write_p, int version, int content_type, const void *buf, size_t len, SSL *ssl, void *arg)); void SSL_set_msg_callback(SSL *ssl, void (*cb) (int write_p, int version, int content_type, const void *buf, size_t len, SSL *ssl, void *arg)); typedef int (*GEN_SESSION_CB) (const SSL *ssl, unsigned char *id, unsigned int *id_len); typedef struct ssl_comp_st { int id; const char *name; COMP_METHOD *method; } SSL_COMP; struct ssl_ctx_st { SSL_METHOD *method; STACK *cipher_list; STACK *cipher_list_by_id; struct x509_store_st *cert_store; struct lhash_st *sessions; unsigned long session_cache_size; struct ssl_session_st *session_cache_head; struct ssl_session_st *session_cache_tail; int session_cache_mode; long session_timeout; int (*new_session_cb) (struct ssl_st *ssl, SSL_SESSION *sess); void (*remove_session_cb) (struct ssl_ctx_st *ctx, SSL_SESSION *sess); SSL_SESSION *(*get_session_cb) (struct ssl_st *ssl, unsigned char *data, int len, int *copy); struct { int sess_connect; int sess_connect_renegotiate; int sess_connect_good; int sess_accept; int sess_accept_renegotiate; int sess_accept_good; int sess_miss; int sess_timeout; int sess_cache_full; int sess_hit; int sess_cb_hit; } stats; int references; int (*app_verify_callback) (X509_STORE_CTX *, void *); void *app_verify_arg; pem_password_cb *default_passwd_callback; void *default_passwd_callback_userdata; int (*client_cert_cb) (SSL *ssl, X509 **x509, EVP_PKEY **pkey); int (*app_gen_cookie_cb) (SSL *ssl, unsigned char *cookie, unsigned int *cookie_len); int (*app_verify_cookie_cb) (SSL *ssl, unsigned char *cookie, unsigned int cookie_len); CRYPTO_EX_DATA ex_data; const EVP_MD *rsa_md5; const EVP_MD *md5; const EVP_MD *sha1; STACK *extra_certs; STACK *comp_methods; void (*info_callback) (const SSL *ssl, int type, int val); STACK *client_CA; unsigned long options; unsigned long mode; long max_cert_list; struct cert_st *cert; int read_ahead; void (*msg_callback) (int write_p, int version, int content_type, const void *buf, size_t len, SSL *ssl, void *arg); void *msg_callback_arg; int verify_mode; unsigned int sid_ctx_length; unsigned char sid_ctx[32]; int (*default_verify_callback) (int ok, X509_STORE_CTX *ctx); GEN_SESSION_CB generate_session_id; X509_VERIFY_PARAM *param; int quiet_shutdown; ENGINE *client_cert_engine; int (*tlsext_servername_callback) (SSL *, int *, void *); void *tlsext_servername_arg; unsigned char tlsext_tick_key_name[16]; unsigned char tlsext_tick_hmac_key[16]; unsigned char tlsext_tick_aes_key[16]; int (*tlsext_ticket_key_cb) (SSL *ssl, unsigned char *name, unsigned char *iv, EVP_CIPHER_CTX *ectx, HMAC_CTX *hctx, int enc); int (*tlsext_status_cb) (SSL *ssl, void *arg); void *tlsext_status_arg; }; struct lhash_st *SSL_CTX_sessions(SSL_CTX *ctx); #line 879 "/usr/include/openssl/ssl.h" void SSL_CTX_sess_set_new_cb(SSL_CTX *ctx, int (*new_session_cb) (struct ssl_st *ssl, SSL_SESSION *sess)); int (*SSL_CTX_sess_get_new_cb(SSL_CTX *ctx)) (struct ssl_st *ssl, SSL_SESSION *sess); void SSL_CTX_sess_set_remove_cb(SSL_CTX *ctx, void (*remove_session_cb) (struct ssl_ctx_st *ctx, SSL_SESSION *sess)); void (*SSL_CTX_sess_get_remove_cb(SSL_CTX *ctx)) (struct ssl_ctx_st *ctx, SSL_SESSION *sess); void SSL_CTX_sess_set_get_cb(SSL_CTX *ctx, SSL_SESSION *(*get_session_cb) (struct ssl_st *ssl, unsigned char *data, int len, int *copy)); SSL_SESSION *(*SSL_CTX_sess_get_get_cb(SSL_CTX *ctx)) (struct ssl_st *ssl, unsigned char *Data, int len, int *copy); void SSL_CTX_set_info_callback(SSL_CTX *ctx, void (*cb) (const SSL *ssl, int type, int val)); void (*SSL_CTX_get_info_callback(SSL_CTX *ctx)) (const SSL *ssl, int type, int val); void SSL_CTX_set_client_cert_cb(SSL_CTX *ctx, int (*client_cert_cb) (SSL *ssl, X509 **x509, EVP_PKEY **pkey)); int (*SSL_CTX_get_client_cert_cb(SSL_CTX *ctx)) (SSL *ssl, X509 **x509, EVP_PKEY **pkey); int SSL_CTX_set_client_cert_engine(SSL_CTX *ctx, ENGINE *e); void SSL_CTX_set_cookie_generate_cb(SSL_CTX *ctx, int (*app_gen_cookie_cb) (SSL *ssl, unsigned char *cookie, unsigned int *cookie_len)); void SSL_CTX_set_cookie_verify_cb(SSL_CTX *ctx, int (*app_verify_cookie_cb) (SSL *ssl, unsigned char *cookie, unsigned int cookie_len)); struct ssl_st { int version; int type; SSL_METHOD *method; BIO *rbio; BIO *wbio; BIO *bbio; #line 966 "/usr/include/openssl/ssl.h" int rwstate; int in_handshake; int (*handshake_func) (SSL *); int server; int new_session; int quiet_shutdown; int shutdown; int state; int rstate; BUF_MEM *init_buf; void *init_msg; int init_num; int init_off; unsigned char *packet; unsigned int packet_length; struct ssl2_state_st *s2; struct ssl3_state_st *s3; struct dtls1_state_st *d1; int read_ahead; void (*msg_callback) (int write_p, int version, int content_type, const void *buf, size_t len, SSL *ssl, void *arg); void *msg_callback_arg; int hit; X509_VERIFY_PARAM *param; STACK *cipher_list; STACK *cipher_list_by_id; EVP_CIPHER_CTX *enc_read_ctx; const EVP_MD *read_hash; COMP_CTX *expand; EVP_CIPHER_CTX *enc_write_ctx; const EVP_MD *write_hash; COMP_CTX *compress; struct cert_st *cert; unsigned int sid_ctx_length; unsigned char sid_ctx[32]; SSL_SESSION *session; GEN_SESSION_CB generate_session_id; int verify_mode; int (*verify_callback) (int ok, X509_STORE_CTX *ctx); void (*info_callback) (const SSL *ssl, int type, int val); int error; int error_code; SSL_CTX *ctx; int debug; long verify_result; CRYPTO_EX_DATA ex_data; STACK *client_CA; int references; unsigned long options; unsigned long mode; long max_cert_list; int first_packet; int client_version; void (*tlsext_debug_cb) (SSL *s, int client_server, int type, unsigned char *data, int len, void *arg); void *tlsext_debug_arg; char *tlsext_hostname; int servername_done; int tlsext_status_type; int tlsext_status_expected; STACK *tlsext_ocsp_ids; X509_EXTENSIONS *tlsext_ocsp_exts; unsigned char *tlsext_ocsp_resp; int tlsext_ocsp_resplen; int tlsext_ticket_expected; TLS_SESSION_TICKET_EXT *tlsext_session_ticket; tls_session_ticket_ext_cb_fn tls_session_ticket_ext_cb; void *tls_session_ticket_ext_cb_arg; tls_session_secret_cb_fn tls_session_secret_cb; void *tls_session_secret_cb_arg; SSL_CTX *initial_ctx; }; #line 1 "/usr/include/openssl/ssl2.h" #line 83 "/usr/include/openssl/ssl2.h" #line 103 "/usr/include/openssl/ssl2.h" #line 119 "/usr/include/openssl/ssl2.h" #line 156 "/usr/include/openssl/ssl2.h" typedef struct ssl2_state_st { int three_byte_header; int clear_text; int escape; int ssl2_rollback; unsigned int wnum; int wpend_tot; const unsigned char *wpend_buf; int wpend_off; int wpend_len; int wpend_ret; int rbuf_left; int rbuf_offs; unsigned char *rbuf; unsigned char *wbuf; unsigned char *write_ptr; unsigned int padding; unsigned int rlength; int ract_data_length; unsigned int wlength; int wact_data_length; unsigned char *ract_data; unsigned char *wact_data; unsigned char *mac_data; unsigned char *read_key; unsigned char *write_key; unsigned int challenge_length; unsigned char challenge[32]; unsigned int conn_id_length; unsigned char conn_id[16]; unsigned int key_material_length; unsigned char key_material[24 * 2]; unsigned long read_sequence; unsigned long write_sequence; struct { unsigned int conn_id_length; unsigned int cert_type; unsigned int cert_length; unsigned int csl; unsigned int clear; unsigned int enc; unsigned char ccl[32]; unsigned int cipher_spec_length; unsigned int session_id_length; unsigned int clen; unsigned int rlen; } tmp; } SSL2_STATE; #line 236 "/usr/include/openssl/ssl2.h" #line 257 "/usr/include/openssl/ssl2.h" #line 1147 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/ssl3.h" #line 1 "/usr/include/openssl/ssl.h" #line 126 "/usr/include/openssl/ssl3.h" #line 1 "/usr/include/openssl/pq_compat.h" #line 1 "/usr/include/openssl/opensslconf.h" #line 1 "/usr/include/openssl/opensslconf-sparc64.h" #line 57 "/usr/include/openssl/opensslconf-sparc64.h" #line 69 "/usr/include/openssl/opensslconf-sparc64.h" #line 115 "/usr/include/openssl/opensslconf-sparc64.h" #line 132 "/usr/include/openssl/opensslconf-sparc64.h" #line 142 "/usr/include/openssl/opensslconf-sparc64.h" #line 180 "/usr/include/openssl/opensslconf-sparc64.h" #line 188 "/usr/include/openssl/opensslconf-sparc64.h" #line 205 "/usr/include/openssl/opensslconf-sparc64.h" #line 212 "/usr/include/openssl/opensslconf-sparc64.h" #line 26 "/usr/include/openssl/opensslconf.h" #line 33 "/usr/include/openssl/opensslconf.h" #line 64 "/usr/include/openssl/pq_compat.h" #line 110 "/usr/include/openssl/pq_compat.h" #line 124 "/usr/include/openssl/pq_compat.h" #line 140 "/usr/include/openssl/pq_compat.h" #line 151 "/usr/include/openssl/pq_compat.h" #line 127 "/usr/include/openssl/ssl3.h" #line 154 "/usr/include/openssl/ssl3.h" #line 161 "/usr/include/openssl/ssl3.h" #line 168 "/usr/include/openssl/ssl3.h" #line 184 "/usr/include/openssl/ssl3.h" #line 196 "/usr/include/openssl/ssl3.h" #line 203 "/usr/include/openssl/ssl3.h" #line 214 "/usr/include/openssl/ssl3.h" #line 221 "/usr/include/openssl/ssl3.h" #line 228 "/usr/include/openssl/ssl3.h" #line 247 "/usr/include/openssl/ssl3.h" #line 254 "/usr/include/openssl/ssl3.h" #line 270 "/usr/include/openssl/ssl3.h" #line 280 "/usr/include/openssl/ssl3.h" #line 308 "/usr/include/openssl/ssl3.h" typedef struct ssl3_record_st { int type; unsigned int length; unsigned int off; unsigned char *data; unsigned char *input; unsigned char *comp; unsigned long epoch; unsigned long seq_num; } SSL3_RECORD; typedef struct ssl3_buffer_st { unsigned char *buf; size_t len; int offset; int left; } SSL3_BUFFER; #line 362 "/usr/include/openssl/ssl3.h" typedef struct ssl3_state_st { long flags; int delay_buf_pop_ret; unsigned char read_sequence[8]; unsigned char read_mac_secret[64]; unsigned char write_sequence[8]; unsigned char write_mac_secret[64]; unsigned char server_random[32]; unsigned char client_random[32]; int need_empty_fragments; int empty_fragment_done; SSL3_BUFFER rbuf; SSL3_BUFFER wbuf; SSL3_RECORD rrec; SSL3_RECORD wrec; unsigned char alert_fragment[2]; unsigned int alert_fragment_len; unsigned char handshake_fragment[4]; unsigned int handshake_fragment_len; unsigned int wnum; int wpend_tot; int wpend_type; int wpend_ret; const unsigned char *wpend_buf; EVP_MD_CTX finish_dgst1; EVP_MD_CTX finish_dgst2; int change_cipher_spec; int warn_alert; int fatal_alert; int alert_dispatch; unsigned char send_alert[2]; int renegotiate; int total_renegotiations; int num_renegotiations; int in_read_app_data; struct { unsigned char cert_verify_md[64 * 2]; unsigned char finish_md[64 * 2]; int finish_md_len; unsigned char peer_finish_md[64 * 2]; int peer_finish_md_len; unsigned long message_size; int message_type; SSL_CIPHER *new_cipher; DH *dh; int next_state; int reuse_message; int cert_req; int ctype_num; char ctype[7]; STACK *ca_names; int use_rsa_tmp; int key_block_length; unsigned char *key_block; const EVP_CIPHER *new_sym_enc; const EVP_MD *new_hash; const SSL_COMP *new_compression; int cert_request; } tmp; unsigned char previous_client_finished[64]; unsigned char previous_client_finished_len; unsigned char previous_server_finished[64]; unsigned char previous_server_finished_len; int send_connection_binding; } SSL3_STATE; #line 507 "/usr/include/openssl/ssl3.h" #line 520 "/usr/include/openssl/ssl3.h" #line 529 "/usr/include/openssl/ssl3.h" #line 554 "/usr/include/openssl/ssl3.h" #line 565 "/usr/include/openssl/ssl3.h" #line 574 "/usr/include/openssl/ssl3.h" #line 588 "/usr/include/openssl/ssl3.h" #line 600 "/usr/include/openssl/ssl3.h" #line 1148 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/tls1.h" #line 122 "/usr/include/openssl/tls1.h" #line 129 "/usr/include/openssl/tls1.h" #line 140 "/usr/include/openssl/tls1.h" const char *SSL_get_servername(const SSL *s, const int type); int SSL_get_servername_type(const SSL *s); #line 226 "/usr/include/openssl/tls1.h" #line 235 "/usr/include/openssl/tls1.h" #line 242 "/usr/include/openssl/tls1.h" #line 250 "/usr/include/openssl/tls1.h" #line 257 "/usr/include/openssl/tls1.h" #line 265 "/usr/include/openssl/tls1.h" #line 314 "/usr/include/openssl/tls1.h" #line 322 "/usr/include/openssl/tls1.h" #line 329 "/usr/include/openssl/tls1.h" #line 368 "/usr/include/openssl/tls1.h" #line 375 "/usr/include/openssl/tls1.h" #line 383 "/usr/include/openssl/tls1.h" #line 392 "/usr/include/openssl/tls1.h" #line 412 "/usr/include/openssl/tls1.h" #line 462 "/usr/include/openssl/tls1.h" struct tls_session_ticket_ext_st { unsigned short length; void *data; }; #line 1149 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/dtls1.h" #line 1 "/usr/include/openssl/pqueue.h" #line 1 "/usr/include/string.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 27 "/usr/include/string.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 34 "/usr/include/string.h" extern void *memcpy (void * __dest, const void * __src, size_t __n) ; extern void *memmove (void *__dest, const void *__src, size_t __n) ; extern void *memccpy (void * __dest, const void * __src, int __c, size_t __n) ; extern void *memset (void *__s, int __c, size_t __n) ; extern int memcmp (const void *__s1, const void *__s2, size_t __n) ; extern void *memchr (const void *__s, int __c, size_t __n) ; #line 80 "/usr/include/string.h" extern char *strcpy (char * __dest, const char * __src) ; extern char *strncpy (char * __dest, const char * __src, size_t __n) ; extern char *strcat (char * __dest, const char * __src) ; extern char *strncat (char * __dest, const char * __src, size_t __n) ; extern int strcmp (const char *__s1, const char *__s2) ; extern int strncmp (const char *__s1, const char *__s2, size_t __n) ; extern int strcoll (const char *__s1, const char *__s2) ; extern size_t strxfrm (char * __dest, const char * __src, size_t __n) ; #line 127 "/usr/include/string.h" extern char *strdup (const char *__s) ; #line 164 "/usr/include/string.h" extern char *strchr (const char *__s, int __c) ; extern char *strrchr (const char *__s, int __c) ; #line 180 "/usr/include/string.h" extern size_t strcspn (const char *__s, const char *__reject) ; extern size_t strspn (const char *__s, const char *__accept) ; extern char *strpbrk (const char *__s, const char *__accept) ; extern char *strstr (const char *__haystack, const char *__needle) ; extern char *strtok (char * __s, const char * __delim) ; extern char *__strtok_r (char * __s, const char * __delim, char ** __save_ptr) ; extern char *strtok_r (char * __s, const char * __delim, char ** __save_ptr) ; #line 238 "/usr/include/string.h" extern size_t strlen (const char *__s) ; #line 252 "/usr/include/string.h" extern char *strerror (int __errnum) ; extern int __xpg_strerror_r (int __errnum, char *__buf, size_t __buflen) ; #line 285 "/usr/include/string.h" extern void __bzero (void *__s, size_t __n) ; extern void bcopy (const void *__src, void *__dest, size_t __n) ; extern void bzero (void *__s, size_t __n) ; extern int bcmp (const void *__s1, const void *__s2, size_t __n) ; extern char *index (const char *__s, int __c) ; extern char *rindex (const char *__s, int __c) ; extern int ffs (int __i) ; #line 329 "/usr/include/string.h" extern int strcasecmp (const char *__s1, const char *__s2) ; extern int strncasecmp (const char *__s1, const char *__s2, size_t __n) ; #line 350 "/usr/include/string.h" extern char *strsep (char ** __stringp, const char * __delim) ; #line 396 "/usr/include/string.h" #line 431 "/usr/include/string.h" #line 66 "/usr/include/openssl/pqueue.h" typedef struct _pqueue *pqueue; typedef struct _pitem { unsigned long priority; void *data; struct _pitem *next; } pitem; typedef struct _pitem *piterator; pitem *pitem_new(unsigned long priority, void *data); void pitem_free(pitem *item); pqueue pqueue_new(void); void pqueue_free(pqueue pq); pitem *pqueue_insert(pqueue pq, pitem *item); pitem *pqueue_peek(pqueue pq); pitem *pqueue_pop(pqueue pq); pitem *pqueue_find(pqueue pq, unsigned long priority); pitem *pqueue_iterator(pqueue pq); pitem *pqueue_next(piterator *iter); void pqueue_print(pqueue pq); int pqueue_size(pqueue pq); #line 65 "/usr/include/openssl/dtls1.h" #line 1 "/usr/include/sys/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 24 "/usr/include/sys/time.h" #line 1 "/usr/include/bits/time.h" #line 60 "/usr/include/bits/time.h" #line 30 "/usr/include/sys/time.h" #line 52 "/usr/include/sys/time.h" struct timezone { int tz_minuteswest; int tz_dsttime; }; typedef struct timezone * __timezone_ptr_t; extern int gettimeofday (struct timeval * __tv, __timezone_ptr_t __tz) ; extern int settimeofday (const struct timeval *__tv, const struct timezone *__tz) ; extern int adjtime (const struct timeval *__delta, struct timeval *__olddelta) ; enum __itimer_which { ITIMER_REAL = 0, ITIMER_VIRTUAL = 1, ITIMER_PROF = 2 }; struct itimerval { struct timeval it_interval; struct timeval it_value; }; typedef int __itimer_which_t; extern int getitimer (__itimer_which_t __which, struct itimerval *__value) ; extern int setitimer (__itimer_which_t __which, const struct itimerval * __new, struct itimerval * __old) ; extern int utimes (const char *__file, const struct timeval __tvp[2]) ; extern int lutimes (const char *__file, const struct timeval __tvp[2]) ; extern int futimes (int __fd, const struct timeval __tvp[2]) ; #line 159 "/usr/include/sys/time.h" #line 190 "/usr/include/sys/time.h" #line 76 "/usr/include/openssl/dtls1.h" typedef struct dtls1_bitmap_st { unsigned long map; unsigned long length; unsigned long max_seq_num; } DTLS1_BITMAP; struct dtls1_retransmit_state { EVP_CIPHER_CTX *enc_write_ctx; const EVP_MD *write_hash; COMP_CTX *compress; SSL_SESSION *session; unsigned short epoch; }; struct hm_header_st { unsigned char type; unsigned long msg_len; unsigned short seq; unsigned long frag_off; unsigned long frag_len; unsigned int is_ccs; struct dtls1_retransmit_state saved_retransmit_state; }; struct ccs_header_st { unsigned char type; unsigned short seq; }; struct dtls1_timeout_st { unsigned int read_timeouts; unsigned int write_timeouts; unsigned int num_alerts; }; typedef struct record_pqueue_st { unsigned short epoch; pqueue q; } record_pqueue; typedef struct hm_fragment_st { struct hm_header_st msg_header; unsigned char *fragment; unsigned char *reassembly; } hm_fragment; typedef struct dtls1_state_st { unsigned int send_cookie; unsigned char cookie[256]; unsigned char rcvd_cookie[256]; unsigned int cookie_len; unsigned short r_epoch; unsigned short w_epoch; DTLS1_BITMAP bitmap; DTLS1_BITMAP next_bitmap; unsigned short handshake_write_seq; unsigned short next_handshake_write_seq; unsigned short handshake_read_seq; unsigned char last_write_sequence[8]; record_pqueue unprocessed_rcds; record_pqueue processed_rcds; pqueue buffered_messages; pqueue sent_messages; record_pqueue buffered_app_data; unsigned int listen; unsigned int mtu; struct hm_header_st w_msg_hdr; struct hm_header_st r_msg_hdr; struct dtls1_timeout_st timeout; struct timeval next_timeout; unsigned short timeout_duration; unsigned char alert_fragment[2]; unsigned int alert_fragment_len; unsigned char handshake_fragment[12]; unsigned int handshake_fragment_len; unsigned int retransmitting; unsigned int change_cipher_spec_ok; } DTLS1_STATE; typedef struct dtls1_record_data_st { unsigned char *packet; unsigned int packet_length; SSL3_BUFFER rbuf; SSL3_RECORD rrec; } DTLS1_RECORD_DATA; #line 1150 "/usr/include/openssl/ssl.h" #line 1 "/usr/include/openssl/ssl23.h" #line 1151 "/usr/include/openssl/ssl.h" #line 1163 "/usr/include/openssl/ssl.h" #line 1179 "/usr/include/openssl/ssl.h" #line 1193 "/usr/include/openssl/ssl.h" #line 1201 "/usr/include/openssl/ssl.h" size_t SSL_get_finished(const SSL *s, void *buf, size_t count); size_t SSL_get_peer_finished(const SSL *s, void *buf, size_t count); #line 1239 "/usr/include/openssl/ssl.h" #line 1252 "/usr/include/openssl/ssl.h" #line 1265 "/usr/include/openssl/ssl.h" #line 1286 "/usr/include/openssl/ssl.h" #line 1310 "/usr/include/openssl/ssl.h" #line 1325 "/usr/include/openssl/ssl.h" #line 1333 "/usr/include/openssl/ssl.h" #line 1341 "/usr/include/openssl/ssl.h" #line 1362 "/usr/include/openssl/ssl.h" #line 1369 "/usr/include/openssl/ssl.h" #line 1382 "/usr/include/openssl/ssl.h" #line 1392 "/usr/include/openssl/ssl.h" #line 1412 "/usr/include/openssl/ssl.h" #line 1421 "/usr/include/openssl/ssl.h" #line 1430 "/usr/include/openssl/ssl.h" #line 1439 "/usr/include/openssl/ssl.h" BIO_METHOD *BIO_f_ssl(void); BIO *BIO_new_ssl(SSL_CTX *ctx, int client); BIO *BIO_new_ssl_connect(SSL_CTX *ctx); BIO *BIO_new_buffer_ssl_connect(SSL_CTX *ctx); int BIO_ssl_copy_session_id(BIO *to, BIO *from); void BIO_ssl_shutdown(BIO *ssl_bio); int SSL_CTX_set_cipher_list(SSL_CTX *, const char *str); SSL_CTX *SSL_CTX_new(SSL_METHOD *meth); void SSL_CTX_free(SSL_CTX *); long SSL_CTX_set_timeout(SSL_CTX *ctx, long t); long SSL_CTX_get_timeout(const SSL_CTX *ctx); X509_STORE *SSL_CTX_get_cert_store(const SSL_CTX *); void SSL_CTX_set_cert_store(SSL_CTX *, X509_STORE *); int SSL_want(const SSL *s); int SSL_clear(SSL *s); void SSL_CTX_flush_sessions(SSL_CTX *ctx, long tm); SSL_CIPHER *SSL_get_current_cipher(const SSL *s); int SSL_CIPHER_get_bits(const SSL_CIPHER *c, int *alg_bits); char *SSL_CIPHER_get_version(const SSL_CIPHER *c); const char *SSL_CIPHER_get_name(const SSL_CIPHER *c); int SSL_get_fd(const SSL *s); int SSL_get_rfd(const SSL *s); int SSL_get_wfd(const SSL *s); const char *SSL_get_cipher_list(const SSL *s, int n); char *SSL_get_shared_ciphers(const SSL *s, char *buf, int len); int SSL_get_read_ahead(const SSL *s); int SSL_pending(const SSL *s); int SSL_set_fd(SSL *s, int fd); int SSL_set_rfd(SSL *s, int fd); int SSL_set_wfd(SSL *s, int fd); void SSL_set_bio(SSL *s, BIO *rbio, BIO *wbio); BIO *SSL_get_rbio(const SSL *s); BIO *SSL_get_wbio(const SSL *s); int SSL_set_cipher_list(SSL *s, const char *str); void SSL_set_read_ahead(SSL *s, int yes); int SSL_get_verify_mode(const SSL *s); int SSL_get_verify_depth(const SSL *s); int (*SSL_get_verify_callback(const SSL *s)) (int, X509_STORE_CTX *); void SSL_set_verify(SSL *s, int mode, int (*callback) (int ok, X509_STORE_CTX *ctx)); void SSL_set_verify_depth(SSL *s, int depth); int SSL_use_RSAPrivateKey(SSL *ssl, RSA *rsa); int SSL_use_RSAPrivateKey_ASN1(SSL *ssl, unsigned char *d, long len); int SSL_use_PrivateKey(SSL *ssl, EVP_PKEY *pkey); int SSL_use_PrivateKey_ASN1(int pk, SSL *ssl, const unsigned char *d, long len); int SSL_use_certificate(SSL *ssl, X509 *x); int SSL_use_certificate_ASN1(SSL *ssl, const unsigned char *d, int len); int SSL_use_RSAPrivateKey_file(SSL *ssl, const char *file, int type); int SSL_use_PrivateKey_file(SSL *ssl, const char *file, int type); int SSL_use_certificate_file(SSL *ssl, const char *file, int type); int SSL_CTX_use_RSAPrivateKey_file(SSL_CTX *ctx, const char *file, int type); int SSL_CTX_use_PrivateKey_file(SSL_CTX *ctx, const char *file, int type); int SSL_CTX_use_certificate_file(SSL_CTX *ctx, const char *file, int type); int SSL_CTX_use_certificate_chain_file(SSL_CTX *ctx, const char *file); STACK *SSL_load_client_CA_file(const char *file); int SSL_add_file_cert_subjects_to_stack(STACK *stackCAs, const char *file); int SSL_add_dir_cert_subjects_to_stack(STACK *stackCAs, const char *dir); void SSL_load_error_strings(void); const char *SSL_state_string(const SSL *s); const char *SSL_rstate_string(const SSL *s); const char *SSL_state_string_long(const SSL *s); const char *SSL_rstate_string_long(const SSL *s); long SSL_SESSION_get_time(const SSL_SESSION *s); long SSL_SESSION_set_time(SSL_SESSION *s, long t); long SSL_SESSION_get_timeout(const SSL_SESSION *s); long SSL_SESSION_set_timeout(SSL_SESSION *s, long t); void SSL_copy_session_id(SSL *to, const SSL *from); SSL_SESSION *SSL_SESSION_new(void); unsigned long SSL_SESSION_hash(const SSL_SESSION *a); int SSL_SESSION_cmp(const SSL_SESSION *a, const SSL_SESSION *b); const unsigned char *SSL_SESSION_get_id(const SSL_SESSION *s, unsigned int *len); int SSL_SESSION_print_fp(FILE *fp, const SSL_SESSION *ses); int SSL_SESSION_print(BIO *fp, const SSL_SESSION *ses); void SSL_SESSION_free(SSL_SESSION *ses); int i2d_SSL_SESSION(SSL_SESSION *in, unsigned char **pp); int SSL_set_session(SSL *to, SSL_SESSION *session); int SSL_CTX_add_session(SSL_CTX *s, SSL_SESSION *c); int SSL_CTX_remove_session(SSL_CTX *, SSL_SESSION *c); int SSL_CTX_set_generate_session_id(SSL_CTX *, GEN_SESSION_CB); int SSL_set_generate_session_id(SSL *, GEN_SESSION_CB); int SSL_has_matching_session_id(const SSL *ssl, const unsigned char *id, unsigned int id_len); SSL_SESSION *d2i_SSL_SESSION(SSL_SESSION **a, const unsigned char **pp, long length); X509 *SSL_get_peer_certificate(const SSL *s); STACK *SSL_get_peer_cert_chain(const SSL *s); int SSL_CTX_get_verify_mode(const SSL_CTX *ctx); int SSL_CTX_get_verify_depth(const SSL_CTX *ctx); int (*SSL_CTX_get_verify_callback(const SSL_CTX *ctx)) (int, X509_STORE_CTX *); void SSL_CTX_set_verify(SSL_CTX *ctx, int mode, int (*callback) (int, X509_STORE_CTX *)); void SSL_CTX_set_verify_depth(SSL_CTX *ctx, int depth); void SSL_CTX_set_cert_verify_callback(SSL_CTX *ctx, int (*cb) (X509_STORE_CTX *, void *), void *arg); int SSL_CTX_use_RSAPrivateKey(SSL_CTX *ctx, RSA *rsa); int SSL_CTX_use_RSAPrivateKey_ASN1(SSL_CTX *ctx, const unsigned char *d, long len); int SSL_CTX_use_PrivateKey(SSL_CTX *ctx, EVP_PKEY *pkey); int SSL_CTX_use_PrivateKey_ASN1(int pk, SSL_CTX *ctx, const unsigned char *d, long len); int SSL_CTX_use_certificate(SSL_CTX *ctx, X509 *x); int SSL_CTX_use_certificate_ASN1(SSL_CTX *ctx, int len, const unsigned char *d); void SSL_CTX_set_default_passwd_cb(SSL_CTX *ctx, pem_password_cb *cb); void SSL_CTX_set_default_passwd_cb_userdata(SSL_CTX *ctx, void *u); int SSL_CTX_check_private_key(const SSL_CTX *ctx); int SSL_check_private_key(const SSL *ctx); int SSL_CTX_set_session_id_context(SSL_CTX *ctx, const unsigned char *sid_ctx, unsigned int sid_ctx_len); SSL *SSL_new(SSL_CTX *ctx); int SSL_set_session_id_context(SSL *ssl, const unsigned char *sid_ctx, unsigned int sid_ctx_len); int SSL_CTX_set_purpose(SSL_CTX *s, int purpose); int SSL_set_purpose(SSL *s, int purpose); int SSL_CTX_set_trust(SSL_CTX *s, int trust); int SSL_set_trust(SSL *s, int trust); void SSL_free(SSL *ssl); int SSL_accept(SSL *ssl); int SSL_connect(SSL *ssl); int SSL_read(SSL *ssl, void *buf, int num); int SSL_peek(SSL *ssl, void *buf, int num); int SSL_write(SSL *ssl, const void *buf, int num); long SSL_ctrl(SSL *ssl, int cmd, long larg, void *parg); long SSL_callback_ctrl(SSL *, int, void (*)(void)); long SSL_CTX_ctrl(SSL_CTX *ctx, int cmd, long larg, void *parg); long SSL_CTX_callback_ctrl(SSL_CTX *, int, void (*)(void)); int SSL_get_error(const SSL *s, int ret_code); const char *SSL_get_version(const SSL *s); int SSL_CTX_set_ssl_version(SSL_CTX *ctx, SSL_METHOD *meth); SSL_METHOD *SSLv2_method(void); SSL_METHOD *SSLv2_server_method(void); SSL_METHOD *SSLv2_client_method(void); SSL_METHOD *SSLv3_method(void); SSL_METHOD *SSLv3_server_method(void); SSL_METHOD *SSLv3_client_method(void); SSL_METHOD *SSLv23_method(void); SSL_METHOD *SSLv23_server_method(void); SSL_METHOD *SSLv23_client_method(void); SSL_METHOD *TLSv1_method(void); SSL_METHOD *TLSv1_server_method(void); SSL_METHOD *TLSv1_client_method(void); SSL_METHOD *DTLSv1_method(void); SSL_METHOD *DTLSv1_server_method(void); SSL_METHOD *DTLSv1_client_method(void); STACK *SSL_get_ciphers(const SSL *s); int SSL_do_handshake(SSL *s); int SSL_renegotiate(SSL *s); int SSL_renegotiate_pending(SSL *s); int SSL_shutdown(SSL *s); SSL_METHOD *SSL_get_ssl_method(SSL *s); int SSL_set_ssl_method(SSL *s, SSL_METHOD *method); const char *SSL_alert_type_string_long(int value); const char *SSL_alert_type_string(int value); const char *SSL_alert_desc_string_long(int value); const char *SSL_alert_desc_string(int value); void SSL_set_client_CA_list(SSL *s, STACK *name_list); void SSL_CTX_set_client_CA_list(SSL_CTX *ctx, STACK *name_list); STACK *SSL_get_client_CA_list(const SSL *s); STACK *SSL_CTX_get_client_CA_list(const SSL_CTX *s); int SSL_add_client_CA(SSL *ssl, X509 *x); int SSL_CTX_add_client_CA(SSL_CTX *ctx, X509 *x); void SSL_set_connect_state(SSL *s); void SSL_set_accept_state(SSL *s); long SSL_get_default_timeout(const SSL *s); int SSL_library_init(void); char *SSL_CIPHER_description(const SSL_CIPHER *, char *buf, int size); STACK *SSL_dup_CA_list(STACK *sk); SSL *SSL_dup(SSL *ssl); X509 *SSL_get_certificate(const SSL *ssl); struct evp_pkey_st *SSL_get_privatekey(SSL *ssl); void SSL_CTX_set_quiet_shutdown(SSL_CTX *ctx, int mode); int SSL_CTX_get_quiet_shutdown(const SSL_CTX *ctx); void SSL_set_quiet_shutdown(SSL *ssl, int mode); int SSL_get_quiet_shutdown(const SSL *ssl); void SSL_set_shutdown(SSL *ssl, int mode); int SSL_get_shutdown(const SSL *ssl); int SSL_version(const SSL *ssl); int SSL_CTX_set_default_verify_paths(SSL_CTX *ctx); int SSL_CTX_load_verify_locations(SSL_CTX *ctx, const char *CAfile, const char *CApath); SSL_SESSION *SSL_get_session(const SSL *ssl); SSL_SESSION *SSL_get1_session(SSL *ssl); SSL_CTX *SSL_get_SSL_CTX(const SSL *ssl); SSL_CTX *SSL_set_SSL_CTX(SSL *ssl, SSL_CTX *ctx); void SSL_set_info_callback(SSL *ssl, void (*cb) (const SSL *ssl, int type, int val)); void (*SSL_get_info_callback(const SSL *ssl)) (const SSL *ssl, int type, int val); int SSL_state(const SSL *ssl); void SSL_set_verify_result(SSL *ssl, long v); long SSL_get_verify_result(const SSL *ssl); int SSL_set_ex_data(SSL *ssl, int idx, void *data); void *SSL_get_ex_data(const SSL *ssl, int idx); int SSL_get_ex_new_index(long argl, void *argp, CRYPTO_EX_new *new_func, CRYPTO_EX_dup *dup_func, CRYPTO_EX_free *free_func); int SSL_SESSION_set_ex_data(SSL_SESSION *ss, int idx, void *data); void *SSL_SESSION_get_ex_data(const SSL_SESSION *ss, int idx); int SSL_SESSION_get_ex_new_index(long argl, void *argp, CRYPTO_EX_new *new_func, CRYPTO_EX_dup *dup_func, CRYPTO_EX_free *free_func); int SSL_CTX_set_ex_data(SSL_CTX *ssl, int idx, void *data); void *SSL_CTX_get_ex_data(const SSL_CTX *ssl, int idx); int SSL_CTX_get_ex_new_index(long argl, void *argp, CRYPTO_EX_new *new_func, CRYPTO_EX_dup *dup_func, CRYPTO_EX_free *free_func); int SSL_get_ex_data_X509_STORE_CTX_idx(void); #line 1734 "/usr/include/openssl/ssl.h" #line 1749 "/usr/include/openssl/ssl.h" void SSL_CTX_set_tmp_rsa_callback(SSL_CTX *ctx, RSA *(*cb) (SSL *ssl, int is_export, int keylength)); void SSL_set_tmp_rsa_callback(SSL *ssl, RSA *(*cb) (SSL *ssl, int is_export, int keylength)); void SSL_CTX_set_tmp_dh_callback(SSL_CTX *ctx, DH *(*dh) (SSL *ssl, int is_export, int keylength)); void SSL_set_tmp_dh_callback(SSL *ssl, DH *(*dh) (SSL *ssl, int is_export, int keylength)); const COMP_METHOD *SSL_get_current_compression(SSL *s); const COMP_METHOD *SSL_get_current_expansion(SSL *s); const char *SSL_COMP_get_name(const COMP_METHOD *comp); STACK *SSL_COMP_get_compression_methods(void); int SSL_COMP_add_compression_method(int id, COMP_METHOD *cm); #line 1782 "/usr/include/openssl/ssl.h" int SSL_set_session_ticket_ext(SSL *s, void *ext_data, int ext_len); int SSL_set_session_ticket_ext_cb(SSL *s, tls_session_ticket_ext_cb_fn cb,void *arg); int SSL_set_session_secret_cb(SSL *s, tls_session_secret_cb_fn tls_session_secret_cb, void *arg); void ERR_load_SSL_strings(void); #line 1998 "/usr/include/openssl/ssl.h" #line 2257 "/usr/include/openssl/ssl.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Found header files ['openssl/ssl.h'] in [] Popping language C ================================================================================ TEST checkSharedLibrary from config.packages.ssl(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:626) TESTING: checkSharedLibrary from config.packages.ssl(config/BuildSystem/config/package.py:626) By default we don't care about checking if the library is shared Popping language C Not a clone of PETSc, don't need Lgrind Pushing language C ================================================================================ TEST configureLibrary from config.packages.valgrind(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:572) TESTING: configureLibrary from config.packages.valgrind(config/BuildSystem/config/package.py:572) Find an installation and check if it can work with PETSc ================================================================================== Checking for a functional valgrind Not checking for library in Compiler specific search VALGRIND: [] because no functions given to check for ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names No functions to check for in library [] [] Checking for headers Compiler specific search VALGRIND: [] Pushing language C ================================================================================ TEST checkInclude from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['valgrind/valgrind.h'] in [] Checking include with compiler flags var CPPFLAGS [] Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c".: Popping language C Not checking for library in Package specific search directory VALGRIND: [] because no functions given to check for ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names No functions to check for in library [] [] Checking for headers Package specific search directory VALGRIND: ['/usr/local/include'] Pushing language C ================================================================================ TEST checkInclude from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['valgrind/valgrind.h'] in ['/usr/local/include'] Checking include with compiler flags var CPPFLAGS ['/usr/local/include'] Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/usr/local/include /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c".: Popping language C Not checking for library in Package specific search directory VALGRIND: [] because no functions given to check for ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names No functions to check for in library [] [] Checking for headers Package specific search directory VALGRIND: ['/usr/local/include'] Pushing language C ================================================================================ TEST checkInclude from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['valgrind/valgrind.h'] in ['/usr/local/include'] Checking include with compiler flags var CPPFLAGS ['/usr/local/include'] Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/usr/local/include /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c".: Popping language C Not checking for library in Package specific search directory VALGRIND: [] because no functions given to check for ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names No functions to check for in library [] [] Checking for headers Package specific search directory VALGRIND: ['/opt/local/include'] Pushing language C ================================================================================ TEST checkInclude from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['valgrind/valgrind.h'] in ['/opt/local/include'] Checking include with compiler flags var CPPFLAGS ['/opt/local/include'] Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/opt/local/include /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Possible ERROR while running preprocessor: exit code 512 stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c"stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include Preprocess stderr before filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c". : Preprocess stderr after filtering:"/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c", line 3: error: cannot open source file "valgrind/valgrind.h" #include ^1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c".: Popping language C VALGRIND: DirPath not found.. skipping: /opt/local/lib64 Executing: uname -s stdout: Linux =============================================================================== It appears you do not have valgrind installed on your system. We HIGHLY recommend you install it from www.valgrind.org Or install valgrind-devel or equivalent using your package manager. Then rerun ./configure =============================================================================== Popping language C ================================================================================ TEST alternateConfigureLibrary from config.packages.pami(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.pami(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.PARTY(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.PARTY(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default Not a clone of PETSc or no Fortran, don't need Sowing ================================================================================ TEST alternateConfigureLibrary from config.packages.p4est(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.p4est(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.tchem(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.tchem(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.cgns(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.cgns(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.fftw(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.fftw(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.Chaco(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.Chaco(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.Mathematica(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.Mathematica(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST locateC2html from config.packages.c2html(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/c2html.py:33) TESTING: locateC2html from config.packages.c2html(config/BuildSystem/config/packages/c2html.py:33) Looking for default C2html executable Checking for program /opt/FJSVtclang/check/c2html...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/c2html...not found Checking for program /opt/kusu/bin/c2html...not found Checking for program /opt/kusu/sbin/c2html...not found Checking for program /usr/pgsql-9.0/bin/c2html...not found Checking for program /usr/local/bin/c2html...not found Checking for program /bin/c2html...not found Checking for program /usr/bin/c2html...not found Checking for program /home/hp150306/t00196/bin/c2html...not found Checking for program /home/hp150306/t00196/shortcut/c2html...not found Checking for program /opt/FJSVxosmmm/sbin/c2html...not found Checking for program /home/hp150306/t00196/c2html...not found Checking for program /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/bin/win32fe/c2html...not found ================================================================================ TEST alternateConfigureLibrary from config.packages.Numpy(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.Numpy(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.mpi4py(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/mpi4py.py:70) TESTING: alternateConfigureLibrary from config.packages.mpi4py(config/BuildSystem/config/packages/mpi4py.py:70) Defined make rule "mpi4py-build" with dependencies "" and code [] Defined make rule "mpi4py-install" with dependencies "" and code [] ================================================================================ TEST alternateConfigureLibrary from config.packages.petsc4py(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/petsc4py.py:103) TESTING: alternateConfigureLibrary from config.packages.petsc4py(config/BuildSystem/config/packages/petsc4py.py:103) Defined make rule "petsc4py-build" with dependencies "" and code [] Defined make rule "petsc4py-install" with dependencies "" and code [] ================================================================================ TEST alternateConfigureLibrary from config.packages.Matlab(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/Matlab.py:35) TESTING: alternateConfigureLibrary from config.packages.Matlab(config/BuildSystem/config/packages/Matlab.py:35) ================================================================================ TEST alternateConfigureLibrary from config.packages.MatlabEngine(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.MatlabEngine(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.opengl(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.opengl(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.glut(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.glut(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.opengles(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.opengles(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.boost(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.boost(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.PTScotch(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.PTScotch(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default Pushing language C ================================================================================ TEST configureLibrary from config.packages.hwloc(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:572) TESTING: configureLibrary from config.packages.hwloc(config/BuildSystem/config/package.py:572) Find an installation and check if it can work with PETSc ================================================================================== Checking for a functional hwloc Checking for library in Compiler specific search HWLOC: [] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [hwloc_topology_init] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char hwloc_topology_init(); static void _check_hwloc_topology_init() { hwloc_topology_init(); } int main() { _check_hwloc_topology_init();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o: In function `_check_hwloc_topology_init': conftest.c:(.text+0x4): undefined reference to `hwloc_topology_init' Popping language C Checking for library in Compiler specific search HWLOC: ['libhwloc.a'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [hwloc_topology_init] in library ['libhwloc.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char hwloc_topology_init(); static void _check_hwloc_topology_init() { hwloc_topology_init(); } int main() { _check_hwloc_topology_init();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -lhwloc -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lhwloc Popping language C Checking for library in Compiler specific search HWLOC: ['libhwloc.a', 'libxml2.a'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [hwloc_topology_init] in library ['libhwloc.a', 'libxml2.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char hwloc_topology_init(); static void _check_hwloc_topology_init() { hwloc_topology_init(); } int main() { _check_hwloc_topology_init();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -lhwloc -lxml2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lhwloc Popping language C Checking for library in Package specific search directory HWLOC: ['/usr/local/lib/libhwloc.a'] Contents: ['bin', 'etc', 'games', 'include', 'lib', 'lib64', 'libexec', 'sbin', 'share', 'src'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [hwloc_topology_init] in library ['/usr/local/lib/libhwloc.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char hwloc_topology_init(); static void _check_hwloc_topology_init() { hwloc_topology_init(); } int main() { _check_hwloc_topology_init();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib -L/usr/local/lib -lhwloc -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lhwloc Popping language C Checking for library in Package specific search directory HWLOC: ['/usr/local/lib/libhwloc.a', 'libxml2.a'] Contents: ['bin', 'etc', 'games', 'include', 'lib', 'lib64', 'libexec', 'sbin', 'share', 'src'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [hwloc_topology_init] in library ['/usr/local/lib/libhwloc.a', 'libxml2.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char hwloc_topology_init(); static void _check_hwloc_topology_init() { hwloc_topology_init(); } int main() { _check_hwloc_topology_init();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib -L/usr/local/lib -lhwloc -lxml2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lhwloc Popping language C Checking for library in Package specific search directory HWLOC: ['/usr/local/lib64/libhwloc.a'] Contents: ['bin', 'etc', 'games', 'include', 'lib', 'lib64', 'libexec', 'sbin', 'share', 'src'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [hwloc_topology_init] in library ['/usr/local/lib64/libhwloc.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char hwloc_topology_init(); static void _check_hwloc_topology_init() { hwloc_topology_init(); } int main() { _check_hwloc_topology_init();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib64 -L/usr/local/lib64 -lhwloc -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lhwloc Popping language C Checking for library in Package specific search directory HWLOC: ['/usr/local/lib64/libhwloc.a', 'libxml2.a'] Contents: ['bin', 'etc', 'games', 'include', 'lib', 'lib64', 'libexec', 'sbin', 'share', 'src'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [hwloc_topology_init] in library ['/usr/local/lib64/libhwloc.a', 'libxml2.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char hwloc_topology_init(); static void _check_hwloc_topology_init() { hwloc_topology_init(); } int main() { _check_hwloc_topology_init();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib64 -L/usr/local/lib64 -lhwloc -lxml2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lhwloc Popping language C Checking for library in Package specific search directory HWLOC: ['/opt/local/lib/libhwloc.a'] Contents: ['bin', 'conf', 'gcc', 'gcc-4.8.1', 'include', 'lib', 'Python-2.7.3', 'Python-2.7.3.omp', 'share', 'sparc64-unknown-linux-gnu', 'openjdk7u45', 'mpiJava', 'mpigcc', 'GCC_4.6.3'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [hwloc_topology_init] in library ['/opt/local/lib/libhwloc.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char hwloc_topology_init(); static void _check_hwloc_topology_init() { hwloc_topology_init(); } int main() { _check_hwloc_topology_init();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -Wl,-rpath,/opt/local/lib -L/opt/local/lib -lhwloc -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lhwloc Popping language C Checking for library in Package specific search directory HWLOC: ['/opt/local/lib/libhwloc.a', 'libxml2.a'] Contents: ['bin', 'conf', 'gcc', 'gcc-4.8.1', 'include', 'lib', 'Python-2.7.3', 'Python-2.7.3.omp', 'share', 'sparc64-unknown-linux-gnu', 'openjdk7u45', 'mpiJava', 'mpigcc', 'GCC_4.6.3'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [hwloc_topology_init] in library ['/opt/local/lib/libhwloc.a', 'libxml2.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char hwloc_topology_init(); static void _check_hwloc_topology_init() { hwloc_topology_init(); } int main() { _check_hwloc_topology_init();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -Wl,-rpath,/opt/local/lib -L/opt/local/lib -lhwloc -lxml2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lhwloc Popping language C HWLOC: DirPath not found.. skipping: /opt/local/lib64 ================================================================================ TEST checkSharedLibrary from config.packages.hwloc(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:626) TESTING: checkSharedLibrary from config.packages.hwloc(config/BuildSystem/config/package.py:626) By default we don't care about checking if the library is shared Popping language C ================================================================================ TEST alternateConfigureLibrary from config.packages.hdf5(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.hdf5(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.netcdf(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.netcdf(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.MOAB(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.MOAB(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.netcdf-cxx(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.netcdf-cxx(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.exodusii(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.exodusii(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default Pushing language C ================================================================================ TEST configureLibrary from config.packages.X(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:572) TESTING: configureLibrary from config.packages.X(config/BuildSystem/config/package.py:572) Find an installation and check if it can work with PETSc ================================================================================== Checking for a functional X Checking for library in Compiler specific search X: [] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [XSetWMName] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char XSetWMName(); static void _check_XSetWMName() { XSetWMName(); } int main() { _check_XSetWMName();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o: In function `_check_XSetWMName': conftest.c:(.text+0x4): undefined reference to `XSetWMName' Popping language C Checking for library in Compiler specific search X: ['libX11.a'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [XSetWMName] in library ['libX11.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char XSetWMName(); static void _check_XSetWMName() { XSetWMName(); } int main() { _check_XSetWMName();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -lX11 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lX11 Popping language C X: SearchDir DirPath not found.. skipping: /opt/X11 X: SearchDir DirPath not found.. skipping: /Developer/SDKs/MacOSX10.5.sdk/usr/X11 X: SearchDir DirPath not found.. skipping: /Developer/SDKs/MacOSX10.4u.sdk/usr/X11R6 X: SearchDir DirPath not found.. skipping: /usr/X11 X: SearchDir DirPath not found.. skipping: /usr/X11R6 X: SearchDir DirPath not found.. skipping: /usr/X11R5 X: SearchDir DirPath not found.. skipping: /usr/X11R4 X: SearchDir DirPath not found.. skipping: /usr/local/X11 X: SearchDir DirPath not found.. skipping: /usr/local/X11R6 X: SearchDir DirPath not found.. skipping: /usr/local/X11R5 X: SearchDir DirPath not found.. skipping: /usr/local/X11R4 X: SearchDir DirPath not found.. skipping: /usr/X386 X: SearchDir DirPath not found.. skipping: /usr/x386 X: SearchDir DirPath not found.. skipping: /usr/XFree86/X11 Checking for library in Package specific search directory X: ['/usr/local/lib/libX11.a'] Contents: ['bin', 'etc', 'games', 'include', 'lib', 'lib64', 'libexec', 'sbin', 'share', 'src'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [XSetWMName] in library ['/usr/local/lib/libX11.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char XSetWMName(); static void _check_XSetWMName() { XSetWMName(); } int main() { _check_XSetWMName();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib -L/usr/local/lib -lX11 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lX11 Popping language C Checking for library in Package specific search directory X: ['/usr/local/lib64/libX11.a'] Contents: ['bin', 'etc', 'games', 'include', 'lib', 'lib64', 'libexec', 'sbin', 'share', 'src'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [XSetWMName] in library ['/usr/local/lib64/libX11.a'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char XSetWMName(); static void _check_XSetWMName() { XSetWMName(); } int main() { _check_XSetWMName();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib64 -L/usr/local/lib64 -lX11 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /usr/bin/ld: cannot find -lX11 Popping language C X: SearchDir DirPath not found.. skipping: /usr/local/x11r5 X: SearchDir DirPath not found.. skipping: /usr/lpp/Xamples X: SearchDir DirPath not found.. skipping: /usr/openwin X: SearchDir DirPath not found.. skipping: /usr/openwin/share ================================================================================ TEST checkSharedLibrary from config.packages.X(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:626) TESTING: checkSharedLibrary from config.packages.X(config/BuildSystem/config/package.py:626) By default we don't care about checking if the library is shared Popping language C ================================================================================ TEST alternateConfigureLibrary from config.packages.Triangle(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.Triangle(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.afterimage(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.afterimage(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default Pushing language C ================================================================================ TEST configureLibrary from config.packages.openmp(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/openmp.py:15) TESTING: configureLibrary from config.packages.openmp(config/BuildSystem/config/packages/openmp.py:15) Checks for -fopenmp compiler flag Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added C compiler flag -Kopenmp Popping language C Pushing language FC Executing: mpifrt -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -X9 -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.F Successful compile: Source: program main end Added FC compiler flag -Kopenmp Popping language FC Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added Cxx compiler flag -Kopenmp Popping language Cxx ================================================================================ TEST checkSharedLibrary from config.packages.openmp(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:626) TESTING: checkSharedLibrary from config.packages.openmp(config/BuildSystem/config/package.py:626) By default we don't care about checking if the library is shared Popping language C ================================================================================ TEST alternateConfigureLibrary from config.packages.saws(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.saws(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default Pushing language C ================================================================================ TEST configureLibrary from config.packages.pthread(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/pthread.py:19) TESTING: configureLibrary from config.packages.pthread(config/BuildSystem/config/packages/pthread.py:19) Checks for pthread_barrier_t, cpu_set_t, and sys/sysctl.h ================================================================================== Checking for a functional pthread Checking for library in Compiler specific search PTHREAD: [] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [pthread_create] in library [] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char pthread_create(); static void _check_pthread_create() { pthread_create(); } int main() { _check_pthread_create();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Checking for headers Compiler specific search PTHREAD: [] Pushing language C ================================================================================ TEST checkInclude from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['pthread.h'] in [] Checking include with compiler flags var CPPFLAGS [] Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/usr/include/pthread.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 24 "/usr/include/pthread.h" #line 1 "/usr/include/endian.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/endian.h" #line 1 "/usr/include/bits/endian.h" #line 38 "/usr/include/endian.h" #line 51 "/usr/include/endian.h" #line 25 "/usr/include/pthread.h" #line 1 "/usr/include/sched.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 24 "/usr/include/sched.h" #line 1 "/usr/include/bits/types.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 28 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/wordsize.h" #line 29 "/usr/include/bits/types.h" typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; #line 68 "/usr/include/bits/types.h" #line 126 "/usr/include/bits/types.h" #line 1 "/usr/include/bits/typesizes.h" #line 61 "/usr/include/bits/typesizes.h" #line 132 "/usr/include/bits/types.h" typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; #line 27 "/usr/include/sched.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 30 "/usr/include/sched.h" #line 1 "/usr/include/time.h" #line 34 "/usr/include/time.h" #line 53 "/usr/include/time.h" #line 69 "/usr/include/time.h" #line 85 "/usr/include/time.h" #line 97 "/usr/include/time.h" #line 109 "/usr/include/time.h" struct timespec { __time_t tv_sec; long int tv_nsec; }; #line 419 "/usr/include/time.h" #line 33 "/usr/include/sched.h" #line 1 "/usr/include/bits/sched.h" #line 36 "/usr/include/bits/sched.h" #line 64 "/usr/include/bits/sched.h" struct sched_param { int __sched_priority; }; extern int clone (int (*__fn) (void *__arg), void *__child_stack, int __flags, void *__arg, ...) ; extern int unshare (int __flags) ; extern int sched_getcpu (void) ; struct __sched_param { int __sched_priority; }; typedef unsigned long int __cpu_mask; typedef struct { __cpu_mask __bits[1024 / (8 * sizeof (__cpu_mask))]; } cpu_set_t; #line 146 "/usr/include/bits/sched.h" #line 164 "/usr/include/bits/sched.h" #line 174 "/usr/include/bits/sched.h" extern int __sched_cpucount (size_t __setsize, const cpu_set_t *__setp) ; extern cpu_set_t *__sched_cpualloc (size_t __count) ; extern void __sched_cpufree (cpu_set_t *__set) ; #line 36 "/usr/include/sched.h" extern int sched_setparam (__pid_t __pid, const struct sched_param *__param) ; extern int sched_getparam (__pid_t __pid, struct sched_param *__param) ; extern int sched_setscheduler (__pid_t __pid, int __policy, const struct sched_param *__param) ; extern int sched_getscheduler (__pid_t __pid) ; extern int sched_yield (void) ; extern int sched_get_priority_max (int __algorithm) ; extern int sched_get_priority_min (int __algorithm) ; extern int sched_rr_get_interval (__pid_t __pid, struct timespec *__t) ; #line 117 "/usr/include/sched.h" #line 26 "/usr/include/pthread.h" #line 1 "/usr/include/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 30 "/usr/include/time.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 40 "/usr/include/time.h" #line 1 "/usr/include/bits/time.h" #line 43 "/usr/include/bits/time.h" #line 44 "/usr/include/time.h" typedef __clock_t clock_t; typedef __time_t time_t; typedef __clockid_t clockid_t; typedef __timer_t timer_t; #line 129 "/usr/include/time.h" struct tm { int tm_sec; int tm_min; int tm_hour; int tm_mday; int tm_mon; int tm_year; int tm_wday; int tm_yday; int tm_isdst; long int tm_gmtoff; const char *tm_zone; }; struct itimerspec { struct timespec it_interval; struct timespec it_value; }; struct sigevent; typedef __pid_t pid_t; extern clock_t clock (void) ; extern time_t time (time_t *__timer) ; extern double difftime (time_t __time1, time_t __time0) ; extern time_t mktime (struct tm *__tp) ; extern size_t strftime (char * __s, size_t __maxsize, const char * __format, const struct tm * __tp) ; #line 212 "/usr/include/time.h" #line 227 "/usr/include/time.h" extern struct tm *gmtime (const time_t *__timer) ; extern struct tm *localtime (const time_t *__timer) ; extern struct tm *gmtime_r (const time_t * __timer, struct tm * __tp) ; extern struct tm *localtime_r (const time_t * __timer, struct tm * __tp) ; extern char *asctime (const struct tm *__tp) ; extern char *ctime (const time_t *__timer) ; extern char *asctime_r (const struct tm * __tp, char * __buf) ; extern char *ctime_r (const time_t * __timer, char * __buf) ; extern char *__tzname[2]; extern int __daylight; extern long int __timezone; extern char *tzname[2]; extern void tzset (void) ; extern int daylight; extern long int timezone; extern int stime (const time_t *__when) ; extern time_t timegm (struct tm *__tp) ; extern time_t timelocal (struct tm *__tp) ; extern int dysize (int __year) ; extern int nanosleep (const struct timespec *__requested_time, struct timespec *__remaining); extern int clock_getres (clockid_t __clock_id, struct timespec *__res) ; extern int clock_gettime (clockid_t __clock_id, struct timespec *__tp) ; extern int clock_settime (clockid_t __clock_id, const struct timespec *__tp) ; extern int clock_nanosleep (clockid_t __clock_id, int __flags, const struct timespec *__req, struct timespec *__rem); extern int clock_getcpuclockid (pid_t __pid, clockid_t *__clock_id) ; extern int timer_create (clockid_t __clock_id, struct sigevent * __evp, timer_t * __timerid) ; extern int timer_delete (timer_t __timerid) ; extern int timer_settime (timer_t __timerid, int __flags, const struct itimerspec * __value, struct itimerspec * __ovalue) ; extern int timer_gettime (timer_t __timerid, struct itimerspec *__value) ; extern int timer_getoverrun (timer_t __timerid) ; #line 400 "/usr/include/time.h" #line 415 "/usr/include/time.h" #line 27 "/usr/include/pthread.h" #line 1 "/usr/include/signal.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 47 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 30 "/usr/include/signal.h" #line 1 "/usr/include/bits/sigset.h" typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; #line 34 "/usr/include/signal.h" #line 46 "/usr/include/signal.h" typedef __sigset_t sigset_t; #line 401 "/usr/include/signal.h" #line 30 "/usr/include/pthread.h" #line 1 "/usr/include/bits/pthreadtypes.h" #line 1 "/usr/include/bits/wordsize.h" #line 25 "/usr/include/bits/pthreadtypes.h" #line 47 "/usr/include/bits/pthreadtypes.h" typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; #line 73 "/usr/include/bits/pthreadtypes.h" typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; #line 102 "/usr/include/bits/pthreadtypes.h" } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; unsigned long long int __total_seq; unsigned long long int __wakeup_seq; unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; #line 188 "/usr/include/bits/pthreadtypes.h" char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; #line 31 "/usr/include/pthread.h" #line 1 "/usr/include/bits/setjmp.h" #line 1 "/usr/include/bits/wordsize.h" #line 28 "/usr/include/bits/setjmp.h" typedef struct __sparc64_jmp_buf { struct __sparc64_jmp_buf *uc_link; unsigned long uc_flags; unsigned long uc_sigmask; struct __sparc64_jmp_buf_mcontext { unsigned long mc_gregs[53]; unsigned long mc_fp; unsigned long mc_i7; struct __sparc64_jmp_buf_fpu { union { unsigned int sregs[512]; unsigned long dregs[256]; long double qregs[128]; } mcfpu_fpregs; unsigned long mcfpu_fsr; unsigned long mcfpu_fprs; unsigned long mcfpu_gsr; unsigned long mcfpu_xasr; void *mcfpu_fq; unsigned char mcfpu_qcnt; unsigned char mcfpu_qentsz; unsigned char mcfpu_enab; } mc_fpregs; } uc_mcontext; } __jmp_buf[1]; #line 70 "/usr/include/bits/setjmp.h" #line 32 "/usr/include/pthread.h" #line 1 "/usr/include/bits/wordsize.h" #line 33 "/usr/include/pthread.h" enum { PTHREAD_CREATE_JOINABLE, PTHREAD_CREATE_DETACHED }; enum { PTHREAD_MUTEX_TIMED_NP, PTHREAD_MUTEX_RECURSIVE_NP, PTHREAD_MUTEX_ERRORCHECK_NP, PTHREAD_MUTEX_ADAPTIVE_NP #line 63 "/usr/include/pthread.h" }; #line 74 "/usr/include/pthread.h" #line 85 "/usr/include/pthread.h" #line 111 "/usr/include/pthread.h" enum { PTHREAD_RWLOCK_PREFER_READER_NP, PTHREAD_RWLOCK_PREFER_WRITER_NP, PTHREAD_RWLOCK_PREFER_WRITER_NONRECURSIVE_NP, PTHREAD_RWLOCK_DEFAULT_NP = PTHREAD_RWLOCK_PREFER_READER_NP }; #line 144 "/usr/include/pthread.h" enum { PTHREAD_INHERIT_SCHED, PTHREAD_EXPLICIT_SCHED }; enum { PTHREAD_SCOPE_SYSTEM, PTHREAD_SCOPE_PROCESS }; enum { PTHREAD_PROCESS_PRIVATE, PTHREAD_PROCESS_SHARED }; struct _pthread_cleanup_buffer { void (*__routine) (void *); void *__arg; int __canceltype; struct _pthread_cleanup_buffer *__prev; }; enum { PTHREAD_CANCEL_ENABLE, PTHREAD_CANCEL_DISABLE }; enum { PTHREAD_CANCEL_DEFERRED, PTHREAD_CANCEL_ASYNCHRONOUS }; extern int pthread_create (pthread_t * __newthread, const pthread_attr_t * __attr, void *(*__start_routine) (void *), void * __arg) ; extern void pthread_exit (void *__retval) ; extern int pthread_join (pthread_t __th, void **__thread_return); #line 258 "/usr/include/pthread.h" extern int pthread_detach (pthread_t __th) ; extern pthread_t pthread_self (void) ; extern int pthread_equal (pthread_t __thread1, pthread_t __thread2) ; extern int pthread_attr_init (pthread_attr_t *__attr) ; extern int pthread_attr_destroy (pthread_attr_t *__attr) ; extern int pthread_attr_getdetachstate (const pthread_attr_t *__attr, int *__detachstate) ; extern int pthread_attr_setdetachstate (pthread_attr_t *__attr, int __detachstate) ; extern int pthread_attr_getguardsize (const pthread_attr_t *__attr, size_t *__guardsize) ; extern int pthread_attr_setguardsize (pthread_attr_t *__attr, size_t __guardsize) ; extern int pthread_attr_getschedparam (const pthread_attr_t * __attr, struct sched_param * __param) ; extern int pthread_attr_setschedparam (pthread_attr_t * __attr, const struct sched_param * __param) ; extern int pthread_attr_getschedpolicy (const pthread_attr_t * __attr, int * __policy) ; extern int pthread_attr_setschedpolicy (pthread_attr_t *__attr, int __policy) ; extern int pthread_attr_getinheritsched (const pthread_attr_t * __attr, int * __inherit) ; extern int pthread_attr_setinheritsched (pthread_attr_t *__attr, int __inherit) ; extern int pthread_attr_getscope (const pthread_attr_t * __attr, int * __scope) ; extern int pthread_attr_setscope (pthread_attr_t *__attr, int __scope) ; extern int pthread_attr_getstackaddr (const pthread_attr_t * __attr, void ** __stackaddr) ; extern int pthread_attr_setstackaddr (pthread_attr_t *__attr, void *__stackaddr) ; extern int pthread_attr_getstacksize (const pthread_attr_t * __attr, size_t * __stacksize) ; extern int pthread_attr_setstacksize (pthread_attr_t *__attr, size_t __stacksize) ; extern int pthread_attr_getstack (const pthread_attr_t * __attr, void ** __stackaddr, size_t * __stacksize) ; extern int pthread_attr_setstack (pthread_attr_t *__attr, void *__stackaddr, size_t __stacksize) ; #line 407 "/usr/include/pthread.h" extern int pthread_setschedparam (pthread_t __target_thread, int __policy, const struct sched_param *__param) ; extern int pthread_getschedparam (pthread_t __target_thread, int * __policy, struct sched_param * __param) ; extern int pthread_setschedprio (pthread_t __target_thread, int __prio) ; #line 435 "/usr/include/pthread.h" #line 455 "/usr/include/pthread.h" extern int pthread_once (pthread_once_t *__once_control, void (*__init_routine) (void)) ; extern int pthread_setcancelstate (int __state, int *__oldstate); extern int pthread_setcanceltype (int __type, int *__oldtype); extern int pthread_cancel (pthread_t __th); extern void pthread_testcancel (void); typedef struct { struct { __jmp_buf __cancel_jmp_buf; int __mask_was_saved; } __cancel_jmp_buf[1]; void *__pad[4]; } __pthread_unwind_buf_t ; struct __pthread_cleanup_frame { void (*__cancel_routine) (void *); void *__cancel_arg; int __do_it; int __cancel_type; }; #line 629 "/usr/include/pthread.h" #line 652 "/usr/include/pthread.h" extern void __pthread_register_cancel (__pthread_unwind_buf_t *__buf) ; #line 663 "/usr/include/pthread.h" extern void __pthread_unregister_cancel (__pthread_unwind_buf_t *__buf) ; #line 701 "/usr/include/pthread.h" extern void __pthread_unwind_next (__pthread_unwind_buf_t *__buf) ; struct __jmp_buf_tag; extern int __sigsetjmp (struct __jmp_buf_tag *__env, int __savemask) ; extern int pthread_mutex_init (pthread_mutex_t *__mutex, const pthread_mutexattr_t *__mutexattr) ; extern int pthread_mutex_destroy (pthread_mutex_t *__mutex) ; extern int pthread_mutex_trylock (pthread_mutex_t *__mutex) ; extern int pthread_mutex_lock (pthread_mutex_t *__mutex) ; extern int pthread_mutex_timedlock (pthread_mutex_t * __mutex, const struct timespec * __abstime) ; extern int pthread_mutex_unlock (pthread_mutex_t *__mutex) ; #line 761 "/usr/include/pthread.h" extern int pthread_mutexattr_init (pthread_mutexattr_t *__attr) ; extern int pthread_mutexattr_destroy (pthread_mutexattr_t *__attr) ; extern int pthread_mutexattr_getpshared (const pthread_mutexattr_t * __attr, int * __pshared) ; extern int pthread_mutexattr_setpshared (pthread_mutexattr_t *__attr, int __pshared) ; #line 827 "/usr/include/pthread.h" #line 839 "/usr/include/pthread.h" extern int pthread_rwlock_init (pthread_rwlock_t * __rwlock, const pthread_rwlockattr_t * __attr) ; extern int pthread_rwlock_destroy (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlock_rdlock (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlock_tryrdlock (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlock_timedrdlock (pthread_rwlock_t * __rwlock, const struct timespec * __abstime) ; extern int pthread_rwlock_wrlock (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlock_trywrlock (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlock_timedwrlock (pthread_rwlock_t * __rwlock, const struct timespec * __abstime) ; extern int pthread_rwlock_unlock (pthread_rwlock_t *__rwlock) ; extern int pthread_rwlockattr_init (pthread_rwlockattr_t *__attr) ; extern int pthread_rwlockattr_destroy (pthread_rwlockattr_t *__attr) ; extern int pthread_rwlockattr_getpshared (const pthread_rwlockattr_t * __attr, int * __pshared) ; extern int pthread_rwlockattr_setpshared (pthread_rwlockattr_t *__attr, int __pshared) ; extern int pthread_rwlockattr_getkind_np (const pthread_rwlockattr_t * __attr, int * __pref) ; extern int pthread_rwlockattr_setkind_np (pthread_rwlockattr_t *__attr, int __pref) ; extern int pthread_cond_init (pthread_cond_t * __cond, const pthread_condattr_t * __cond_attr) ; extern int pthread_cond_destroy (pthread_cond_t *__cond) ; extern int pthread_cond_signal (pthread_cond_t *__cond) ; extern int pthread_cond_broadcast (pthread_cond_t *__cond) ; extern int pthread_cond_wait (pthread_cond_t * __cond, pthread_mutex_t * __mutex) ; extern int pthread_cond_timedwait (pthread_cond_t * __cond, pthread_mutex_t * __mutex, const struct timespec * __abstime) ; extern int pthread_condattr_init (pthread_condattr_t *__attr) ; extern int pthread_condattr_destroy (pthread_condattr_t *__attr) ; extern int pthread_condattr_getpshared (const pthread_condattr_t * __attr, int * __pshared) ; extern int pthread_condattr_setpshared (pthread_condattr_t *__attr, int __pshared) ; extern int pthread_condattr_getclock (const pthread_condattr_t * __attr, __clockid_t * __clock_id) ; extern int pthread_condattr_setclock (pthread_condattr_t *__attr, __clockid_t __clock_id) ; extern int pthread_spin_init (pthread_spinlock_t *__lock, int __pshared) ; extern int pthread_spin_destroy (pthread_spinlock_t *__lock) ; extern int pthread_spin_lock (pthread_spinlock_t *__lock) ; extern int pthread_spin_trylock (pthread_spinlock_t *__lock) ; extern int pthread_spin_unlock (pthread_spinlock_t *__lock) ; extern int pthread_barrier_init (pthread_barrier_t * __barrier, const pthread_barrierattr_t * __attr, unsigned int __count) ; extern int pthread_barrier_destroy (pthread_barrier_t *__barrier) ; extern int pthread_barrier_wait (pthread_barrier_t *__barrier) ; extern int pthread_barrierattr_init (pthread_barrierattr_t *__attr) ; extern int pthread_barrierattr_destroy (pthread_barrierattr_t *__attr) ; extern int pthread_barrierattr_getpshared (const pthread_barrierattr_t * __attr, int * __pshared) ; extern int pthread_barrierattr_setpshared (pthread_barrierattr_t *__attr, int __pshared) ; extern int pthread_key_create (pthread_key_t *__key, void (*__destr_function) (void *)) ; extern int pthread_key_delete (pthread_key_t __key) ; extern void *pthread_getspecific (pthread_key_t __key) ; extern int pthread_setspecific (pthread_key_t __key, const void *__pointer) ; extern int pthread_getcpuclockid (pthread_t __thread_id, __clockid_t *__clock_id) ; extern int pthread_atfork (void (*__prepare) (void), void (*__parent) (void), void (*__child) (void)) ; #line 1116 "/usr/include/pthread.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Found header files ['pthread.h'] in [] Popping language C All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread/conftest.c", line 6: warning: variable "a" was declared but never referenced pthread_barrier_t *a; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { pthread_barrier_t *a; ; return 0; } Defined "HAVE_PTHREAD_BARRIER_T" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread/conftest.c", line 6: warning: variable "a" was declared but never referenced cpu_set_t *a; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { cpu_set_t *a; ; return 0; } Defined "HAVE_SCHED_CPU_SET_T" to "1" Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread/conftest.c" #line 1 "/usr/include/sys/sysctl.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 41 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 1 "/usr/include/features.h" #line 115 "/usr/include/features.h" #line 138 "/usr/include/features.h" #line 147 "/usr/include/features.h" #line 169 "/usr/include/features.h" #line 179 "/usr/include/features.h" #line 208 "/usr/include/features.h" #line 247 "/usr/include/features.h" #line 299 "/usr/include/features.h" #line 331 "/usr/include/features.h" #line 1 "/usr/include/sys/cdefs.h" #line 60 "/usr/include/sys/cdefs.h" #line 96 "/usr/include/sys/cdefs.h" #line 111 "/usr/include/sys/cdefs.h" #line 121 "/usr/include/sys/cdefs.h" #line 149 "/usr/include/sys/cdefs.h" #line 166 "/usr/include/sys/cdefs.h" #line 198 "/usr/include/sys/cdefs.h" #line 234 "/usr/include/sys/cdefs.h" #line 264 "/usr/include/sys/cdefs.h" #line 287 "/usr/include/sys/cdefs.h" #line 318 "/usr/include/sys/cdefs.h" #line 328 "/usr/include/sys/cdefs.h" #line 359 "/usr/include/sys/cdefs.h" #line 1 "/usr/include/bits/wordsize.h" #line 361 "/usr/include/sys/cdefs.h" #line 393 "/usr/include/sys/cdefs.h" #line 336 "/usr/include/features.h" #line 1 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/bits/wordsize.h" #line 5 "/usr/include/gnu/stubs.h" #line 1 "/usr/include/gnu/stubs-64.h" #line 10 "/usr/include/gnu/stubs.h" #line 360 "/usr/include/features.h" #line 50 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/features.h" #line 23 "/usr/include/sys/sysctl.h" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 24 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 42 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" typedef unsigned long size_t; #line 54 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 64 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 72 "//opt/FJSVtclang/GM-1.2.0-20/bin/../include/stddef.h" #line 25 "/usr/include/sys/sysctl.h" #line 43 "/usr/include/sys/sysctl.h" #line 1 "/usr/include/linux/sysctl.h" #line 1 "/usr/include/linux/kernel.h" #line 29 "/usr/include/linux/sysctl.h" #line 1 "/usr/include/linux/types.h" #line 30 "/usr/include/linux/sysctl.h" struct file; struct completion; struct __sysctl_args { int *name; int nlen; void *oldval; size_t *oldlenp; void *newval; size_t newlen; unsigned long __unused[4]; }; enum { CTL_KERN=1, CTL_VM=2, CTL_NET=3, CTL_PROC=4, CTL_FS=5, CTL_DEBUG=6, CTL_DEV=7, CTL_BUS=8, CTL_ABI=9, CTL_CPU=10, CTL_ARLAN=254, CTL_S390DBF=5677, CTL_SUNRPC=7249, CTL_PM=9899, CTL_FRV=9898, }; enum { CTL_BUS_ISA=1 }; enum { INOTIFY_MAX_USER_INSTANCES=1, INOTIFY_MAX_USER_WATCHES=2, INOTIFY_MAX_QUEUED_EVENTS=3 }; enum { KERN_OSTYPE=1, KERN_OSRELEASE=2, KERN_OSREV=3, KERN_VERSION=4, KERN_SECUREMASK=5, KERN_PROF=6, KERN_NODENAME=7, KERN_DOMAINNAME=8, KERN_PANIC=15, KERN_REALROOTDEV=16, KERN_SPARC_REBOOT=21, KERN_CTLALTDEL=22, KERN_PRINTK=23, KERN_NAMETRANS=24, KERN_PPC_HTABRECLAIM=25, KERN_PPC_ZEROPAGED=26, KERN_PPC_POWERSAVE_NAP=27, KERN_MODPROBE=28, KERN_SG_BIG_BUFF=29, KERN_ACCT=30, KERN_PPC_L2CR=31, KERN_RTSIGNR=32, KERN_RTSIGMAX=33, KERN_SHMMAX=34, KERN_MSGMAX=35, KERN_MSGMNB=36, KERN_MSGPOOL=37, KERN_SYSRQ=38, KERN_MAX_THREADS=39, KERN_RANDOM=40, KERN_SHMALL=41, KERN_MSGMNI=42, KERN_SEM=43, KERN_SPARC_STOP_A=44, KERN_SHMMNI=45, KERN_OVERFLOWUID=46, KERN_OVERFLOWGID=47, KERN_SHMPATH=48, KERN_HOTPLUG=49, KERN_IEEE_EMULATION_WARNINGS=50, KERN_S390_USER_DEBUG_LOGGING=51, KERN_CORE_USES_PID=52, KERN_TAINTED=53, KERN_CADPID=54, KERN_PIDMAX=55, KERN_CORE_PATTERN=56, KERN_PANIC_ON_OOPS=57, KERN_HPPA_PWRSW=58, KERN_HPPA_UNALIGNED=59, KERN_PRINTK_RATELIMIT=60, KERN_PRINTK_RATELIMIT_BURST=61, KERN_PTY=62, KERN_NGROUPS_MAX=63, KERN_SPARC_SCONS_PWROFF=64, KERN_HZ_TIMER=65, KERN_UNKNOWN_NMI_PANIC=66, KERN_BOOTLOADER_TYPE=67, KERN_RANDOMIZE=68, KERN_SETUID_DUMPABLE=69, KERN_SPIN_RETRY=70, KERN_ACPI_VIDEO_FLAGS=71, KERN_IA64_UNALIGNED=72, KERN_COMPAT_LOG=73, KERN_MAX_LOCK_DEPTH=74, KERN_NMI_WATCHDOG=75, KERN_PANIC_ON_NMI=76, }; enum { VM_UNUSED1=1, VM_UNUSED2=2, VM_UNUSED3=3, VM_UNUSED4=4, VM_OVERCOMMIT_MEMORY=5, VM_UNUSED5=6, VM_UNUSED7=7, VM_UNUSED8=8, VM_UNUSED9=9, VM_PAGE_CLUSTER=10, VM_DIRTY_BACKGROUND=11, VM_DIRTY_RATIO=12, VM_DIRTY_WB_CS=13, VM_DIRTY_EXPIRE_CS=14, VM_NR_PDFLUSH_THREADS=15, VM_OVERCOMMIT_RATIO=16, VM_PAGEBUF=17, VM_HUGETLB_PAGES=18, VM_SWAPPINESS=19, VM_LOWMEM_RESERVE_RATIO=20, VM_MIN_FREE_KBYTES=21, VM_MAX_MAP_COUNT=22, VM_LAPTOP_MODE=23, VM_BLOCK_DUMP=24, VM_HUGETLB_GROUP=25, VM_VFS_CACHE_PRESSURE=26, VM_LEGACY_VA_LAYOUT=27, VM_SWAP_TOKEN_TIMEOUT=28, VM_DROP_PAGECACHE=29, VM_PERCPU_PAGELIST_FRACTION=30, VM_ZONE_RECLAIM_MODE=31, VM_MIN_UNMAPPED=32, VM_PANIC_ON_OOM=33, VM_VDSO_ENABLED=34, VM_MIN_SLAB=35, VM_MPG_CTL=36, }; enum mpg_proc_type { MPG_CTL_TOTAL_BYTES = 1, }; enum { NET_CORE=1, NET_ETHER=2, NET_802=3, NET_UNIX=4, NET_IPV4=5, NET_IPX=6, NET_ATALK=7, NET_NETROM=8, NET_AX25=9, NET_BRIDGE=10, NET_ROSE=11, NET_IPV6=12, NET_X25=13, NET_TR=14, NET_DECNET=15, NET_ECONET=16, NET_SCTP=17, NET_LLC=18, NET_NETFILTER=19, NET_DCCP=20, NET_IRDA=412, }; enum { RANDOM_POOLSIZE=1, RANDOM_ENTROPY_COUNT=2, RANDOM_READ_THRESH=3, RANDOM_WRITE_THRESH=4, RANDOM_BOOT_ID=5, RANDOM_UUID=6 }; enum { PTY_MAX=1, PTY_NR=2 }; enum { BUS_ISA_MEM_BASE=1, BUS_ISA_PORT_BASE=2, BUS_ISA_PORT_SHIFT=3 }; enum { NET_CORE_WMEM_MAX=1, NET_CORE_RMEM_MAX=2, NET_CORE_WMEM_DEFAULT=3, NET_CORE_RMEM_DEFAULT=4, NET_CORE_MAX_BACKLOG=6, NET_CORE_FASTROUTE=7, NET_CORE_MSG_COST=8, NET_CORE_MSG_BURST=9, NET_CORE_OPTMEM_MAX=10, NET_CORE_HOT_LIST_LENGTH=11, NET_CORE_DIVERT_VERSION=12, NET_CORE_NO_CONG_THRESH=13, NET_CORE_NO_CONG=14, NET_CORE_LO_CONG=15, NET_CORE_MOD_CONG=16, NET_CORE_DEV_WEIGHT=17, NET_CORE_SOMAXCONN=18, NET_CORE_BUDGET=19, NET_CORE_AEVENT_ETIME=20, NET_CORE_AEVENT_RSEQTH=21, NET_CORE_WARNINGS=22, }; enum { NET_UNIX_DESTROY_DELAY=1, NET_UNIX_DELETE_DELAY=2, NET_UNIX_MAX_DGRAM_QLEN=3, }; enum { NET_NF_CONNTRACK_MAX=1, NET_NF_CONNTRACK_TCP_TIMEOUT_SYN_SENT=2, NET_NF_CONNTRACK_TCP_TIMEOUT_SYN_RECV=3, NET_NF_CONNTRACK_TCP_TIMEOUT_ESTABLISHED=4, NET_NF_CONNTRACK_TCP_TIMEOUT_FIN_WAIT=5, NET_NF_CONNTRACK_TCP_TIMEOUT_CLOSE_WAIT=6, NET_NF_CONNTRACK_TCP_TIMEOUT_LAST_ACK=7, NET_NF_CONNTRACK_TCP_TIMEOUT_TIME_WAIT=8, NET_NF_CONNTRACK_TCP_TIMEOUT_CLOSE=9, NET_NF_CONNTRACK_UDP_TIMEOUT=10, NET_NF_CONNTRACK_UDP_TIMEOUT_STREAM=11, NET_NF_CONNTRACK_ICMP_TIMEOUT=12, NET_NF_CONNTRACK_GENERIC_TIMEOUT=13, NET_NF_CONNTRACK_BUCKETS=14, NET_NF_CONNTRACK_LOG_INVALID=15, NET_NF_CONNTRACK_TCP_TIMEOUT_MAX_RETRANS=16, NET_NF_CONNTRACK_TCP_LOOSE=17, NET_NF_CONNTRACK_TCP_BE_LIBERAL=18, NET_NF_CONNTRACK_TCP_MAX_RETRANS=19, NET_NF_CONNTRACK_SCTP_TIMEOUT_CLOSED=20, NET_NF_CONNTRACK_SCTP_TIMEOUT_COOKIE_WAIT=21, NET_NF_CONNTRACK_SCTP_TIMEOUT_COOKIE_ECHOED=22, NET_NF_CONNTRACK_SCTP_TIMEOUT_ESTABLISHED=23, NET_NF_CONNTRACK_SCTP_TIMEOUT_SHUTDOWN_SENT=24, NET_NF_CONNTRACK_SCTP_TIMEOUT_SHUTDOWN_RECD=25, NET_NF_CONNTRACK_SCTP_TIMEOUT_SHUTDOWN_ACK_SENT=26, NET_NF_CONNTRACK_COUNT=27, NET_NF_CONNTRACK_ICMPV6_TIMEOUT=28, NET_NF_CONNTRACK_FRAG6_TIMEOUT=29, NET_NF_CONNTRACK_FRAG6_LOW_THRESH=30, NET_NF_CONNTRACK_FRAG6_HIGH_THRESH=31, NET_NF_CONNTRACK_CHECKSUM=32, }; enum { NET_IPV4_FORWARD=8, NET_IPV4_DYNADDR=9, NET_IPV4_CONF=16, NET_IPV4_NEIGH=17, NET_IPV4_ROUTE=18, NET_IPV4_FIB_HASH=19, NET_IPV4_NETFILTER=20, NET_IPV4_TCP_TIMESTAMPS=33, NET_IPV4_TCP_WINDOW_SCALING=34, NET_IPV4_TCP_SACK=35, NET_IPV4_TCP_RETRANS_COLLAPSE=36, NET_IPV4_DEFAULT_TTL=37, NET_IPV4_AUTOCONFIG=38, NET_IPV4_NO_PMTU_DISC=39, NET_IPV4_TCP_SYN_RETRIES=40, NET_IPV4_IPFRAG_HIGH_THRESH=41, NET_IPV4_IPFRAG_LOW_THRESH=42, NET_IPV4_IPFRAG_TIME=43, NET_IPV4_TCP_MAX_KA_PROBES=44, NET_IPV4_TCP_KEEPALIVE_TIME=45, NET_IPV4_TCP_KEEPALIVE_PROBES=46, NET_IPV4_TCP_RETRIES1=47, NET_IPV4_TCP_RETRIES2=48, NET_IPV4_TCP_FIN_TIMEOUT=49, NET_IPV4_IP_MASQ_DEBUG=50, NET_TCP_SYNCOOKIES=51, NET_TCP_STDURG=52, NET_TCP_RFC1337=53, NET_TCP_SYN_TAILDROP=54, NET_TCP_MAX_SYN_BACKLOG=55, NET_IPV4_LOCAL_PORT_RANGE=56, NET_IPV4_ICMP_ECHO_IGNORE_ALL=57, NET_IPV4_ICMP_ECHO_IGNORE_BROADCASTS=58, NET_IPV4_ICMP_SOURCEQUENCH_RATE=59, NET_IPV4_ICMP_DESTUNREACH_RATE=60, NET_IPV4_ICMP_TIMEEXCEED_RATE=61, NET_IPV4_ICMP_PARAMPROB_RATE=62, NET_IPV4_ICMP_ECHOREPLY_RATE=63, NET_IPV4_ICMP_IGNORE_BOGUS_ERROR_RESPONSES=64, NET_IPV4_IGMP_MAX_MEMBERSHIPS=65, NET_TCP_TW_RECYCLE=66, NET_IPV4_ALWAYS_DEFRAG=67, NET_IPV4_TCP_KEEPALIVE_INTVL=68, NET_IPV4_INET_PEER_THRESHOLD=69, NET_IPV4_INET_PEER_MINTTL=70, NET_IPV4_INET_PEER_MAXTTL=71, NET_IPV4_INET_PEER_GC_MINTIME=72, NET_IPV4_INET_PEER_GC_MAXTIME=73, NET_TCP_ORPHAN_RETRIES=74, NET_TCP_ABORT_ON_OVERFLOW=75, NET_TCP_SYNACK_RETRIES=76, NET_TCP_MAX_ORPHANS=77, NET_TCP_MAX_TW_BUCKETS=78, NET_TCP_FACK=79, NET_TCP_REORDERING=80, NET_TCP_ECN=81, NET_TCP_DSACK=82, NET_TCP_MEM=83, NET_TCP_WMEM=84, NET_TCP_RMEM=85, NET_TCP_APP_WIN=86, NET_TCP_ADV_WIN_SCALE=87, NET_IPV4_NONLOCAL_BIND=88, NET_IPV4_ICMP_RATELIMIT=89, NET_IPV4_ICMP_RATEMASK=90, NET_TCP_TW_REUSE=91, NET_TCP_FRTO=92, NET_TCP_LOW_LATENCY=93, NET_IPV4_IPFRAG_SECRET_INTERVAL=94, NET_IPV4_IGMP_MAX_MSF=96, NET_TCP_NO_METRICS_SAVE=97, NET_TCP_DEFAULT_WIN_SCALE=105, NET_TCP_MODERATE_RCVBUF=106, NET_TCP_TSO_WIN_DIVISOR=107, NET_TCP_BIC_BETA=108, NET_IPV4_ICMP_ERRORS_USE_INBOUND_IFADDR=109, NET_TCP_CONG_CONTROL=110, NET_TCP_ABC=111, NET_IPV4_IPFRAG_MAX_DIST=112, NET_TCP_MTU_PROBING=113, NET_TCP_BASE_MSS=114, NET_IPV4_TCP_WORKAROUND_SIGNED_WINDOWS=115, NET_TCP_DMA_COPYBREAK=116, NET_TCP_SLOW_START_AFTER_IDLE=117, NET_CIPSOV4_CACHE_ENABLE=118, NET_CIPSOV4_CACHE_BUCKET_SIZE=119, NET_CIPSOV4_RBM_OPTFMT=120, NET_CIPSOV4_RBM_STRICTVALID=121, NET_TCP_AVAIL_CONG_CONTROL=122, NET_TCP_ALLOWED_CONG_CONTROL=123, NET_TCP_MAX_SSTHRESH=124, NET_TCP_FRTO_RESPONSE=125, }; enum { NET_IPV4_ROUTE_FLUSH=1, NET_IPV4_ROUTE_MIN_DELAY=2, NET_IPV4_ROUTE_MAX_DELAY=3, NET_IPV4_ROUTE_GC_THRESH=4, NET_IPV4_ROUTE_MAX_SIZE=5, NET_IPV4_ROUTE_GC_MIN_INTERVAL=6, NET_IPV4_ROUTE_GC_TIMEOUT=7, NET_IPV4_ROUTE_GC_INTERVAL=8, NET_IPV4_ROUTE_REDIRECT_LOAD=9, NET_IPV4_ROUTE_REDIRECT_NUMBER=10, NET_IPV4_ROUTE_REDIRECT_SILENCE=11, NET_IPV4_ROUTE_ERROR_COST=12, NET_IPV4_ROUTE_ERROR_BURST=13, NET_IPV4_ROUTE_GC_ELASTICITY=14, NET_IPV4_ROUTE_MTU_EXPIRES=15, NET_IPV4_ROUTE_MIN_PMTU=16, NET_IPV4_ROUTE_MIN_ADVMSS=17, NET_IPV4_ROUTE_SECRET_INTERVAL=18, NET_IPV4_ROUTE_GC_MIN_INTERVAL_MS=19, }; enum { NET_PROTO_CONF_ALL=-2, NET_PROTO_CONF_DEFAULT=-3 }; enum { NET_IPV4_CONF_FORWARDING=1, NET_IPV4_CONF_MC_FORWARDING=2, NET_IPV4_CONF_PROXY_ARP=3, NET_IPV4_CONF_ACCEPT_REDIRECTS=4, NET_IPV4_CONF_SECURE_REDIRECTS=5, NET_IPV4_CONF_SEND_REDIRECTS=6, NET_IPV4_CONF_SHARED_MEDIA=7, NET_IPV4_CONF_RP_FILTER=8, NET_IPV4_CONF_ACCEPT_SOURCE_ROUTE=9, NET_IPV4_CONF_BOOTP_RELAY=10, NET_IPV4_CONF_LOG_MARTIANS=11, NET_IPV4_CONF_TAG=12, NET_IPV4_CONF_ARPFILTER=13, NET_IPV4_CONF_MEDIUM_ID=14, NET_IPV4_CONF_NOXFRM=15, NET_IPV4_CONF_NOPOLICY=16, NET_IPV4_CONF_FORCE_IGMP_VERSION=17, NET_IPV4_CONF_ARP_ANNOUNCE=18, NET_IPV4_CONF_ARP_IGNORE=19, NET_IPV4_CONF_PROMOTE_SECONDARIES=20, NET_IPV4_CONF_ARP_ACCEPT=21, __NET_IPV4_CONF_MAX }; enum { NET_IPV4_NF_CONNTRACK_MAX=1, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_SYN_SENT=2, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_SYN_RECV=3, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_ESTABLISHED=4, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_FIN_WAIT=5, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_CLOSE_WAIT=6, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_LAST_ACK=7, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_TIME_WAIT=8, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_CLOSE=9, NET_IPV4_NF_CONNTRACK_UDP_TIMEOUT=10, NET_IPV4_NF_CONNTRACK_UDP_TIMEOUT_STREAM=11, NET_IPV4_NF_CONNTRACK_ICMP_TIMEOUT=12, NET_IPV4_NF_CONNTRACK_GENERIC_TIMEOUT=13, NET_IPV4_NF_CONNTRACK_BUCKETS=14, NET_IPV4_NF_CONNTRACK_LOG_INVALID=15, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_MAX_RETRANS=16, NET_IPV4_NF_CONNTRACK_TCP_LOOSE=17, NET_IPV4_NF_CONNTRACK_TCP_BE_LIBERAL=18, NET_IPV4_NF_CONNTRACK_TCP_MAX_RETRANS=19, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_CLOSED=20, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_COOKIE_WAIT=21, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_COOKIE_ECHOED=22, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_ESTABLISHED=23, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_SHUTDOWN_SENT=24, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_SHUTDOWN_RECD=25, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_SHUTDOWN_ACK_SENT=26, NET_IPV4_NF_CONNTRACK_COUNT=27, NET_IPV4_NF_CONNTRACK_CHECKSUM=28, }; enum { NET_IPV6_CONF=16, NET_IPV6_NEIGH=17, NET_IPV6_ROUTE=18, NET_IPV6_ICMP=19, NET_IPV6_BINDV6ONLY=20, NET_IPV6_IP6FRAG_HIGH_THRESH=21, NET_IPV6_IP6FRAG_LOW_THRESH=22, NET_IPV6_IP6FRAG_TIME=23, NET_IPV6_IP6FRAG_SECRET_INTERVAL=24, NET_IPV6_MLD_MAX_MSF=25, }; enum { NET_IPV6_ROUTE_FLUSH=1, NET_IPV6_ROUTE_GC_THRESH=2, NET_IPV6_ROUTE_MAX_SIZE=3, NET_IPV6_ROUTE_GC_MIN_INTERVAL=4, NET_IPV6_ROUTE_GC_TIMEOUT=5, NET_IPV6_ROUTE_GC_INTERVAL=6, NET_IPV6_ROUTE_GC_ELASTICITY=7, NET_IPV6_ROUTE_MTU_EXPIRES=8, NET_IPV6_ROUTE_MIN_ADVMSS=9, NET_IPV6_ROUTE_GC_MIN_INTERVAL_MS=10 }; enum { NET_IPV6_FORWARDING=1, NET_IPV6_HOP_LIMIT=2, NET_IPV6_MTU=3, NET_IPV6_ACCEPT_RA=4, NET_IPV6_ACCEPT_REDIRECTS=5, NET_IPV6_AUTOCONF=6, NET_IPV6_DAD_TRANSMITS=7, NET_IPV6_RTR_SOLICITS=8, NET_IPV6_RTR_SOLICIT_INTERVAL=9, NET_IPV6_RTR_SOLICIT_DELAY=10, NET_IPV6_USE_TEMPADDR=11, NET_IPV6_TEMP_VALID_LFT=12, NET_IPV6_TEMP_PREFERED_LFT=13, NET_IPV6_REGEN_MAX_RETRY=14, NET_IPV6_MAX_DESYNC_FACTOR=15, NET_IPV6_MAX_ADDRESSES=16, NET_IPV6_FORCE_MLD_VERSION=17, NET_IPV6_ACCEPT_RA_DEFRTR=18, NET_IPV6_ACCEPT_RA_PINFO=19, NET_IPV6_ACCEPT_RA_RTR_PREF=20, NET_IPV6_RTR_PROBE_INTERVAL=21, NET_IPV6_ACCEPT_RA_RT_INFO_MAX_PLEN=22, NET_IPV6_PROXY_NDP=23, NET_IPV6_ACCEPT_SOURCE_ROUTE=25, __NET_IPV6_MAX }; enum { NET_IPV6_ICMP_RATELIMIT=1 }; enum { NET_NEIGH_MCAST_SOLICIT=1, NET_NEIGH_UCAST_SOLICIT=2, NET_NEIGH_APP_SOLICIT=3, NET_NEIGH_RETRANS_TIME=4, NET_NEIGH_REACHABLE_TIME=5, NET_NEIGH_DELAY_PROBE_TIME=6, NET_NEIGH_GC_STALE_TIME=7, NET_NEIGH_UNRES_QLEN=8, NET_NEIGH_PROXY_QLEN=9, NET_NEIGH_ANYCAST_DELAY=10, NET_NEIGH_PROXY_DELAY=11, NET_NEIGH_LOCKTIME=12, NET_NEIGH_GC_INTERVAL=13, NET_NEIGH_GC_THRESH1=14, NET_NEIGH_GC_THRESH2=15, NET_NEIGH_GC_THRESH3=16, NET_NEIGH_RETRANS_TIME_MS=17, NET_NEIGH_REACHABLE_TIME_MS=18, __NET_NEIGH_MAX }; enum { NET_DCCP_DEFAULT=1, }; enum { NET_IPX_PPROP_BROADCASTING=1, NET_IPX_FORWARDING=2 }; enum { NET_LLC2=1, NET_LLC_STATION=2, }; enum { NET_LLC2_TIMEOUT=1, }; enum { NET_LLC_STATION_ACK_TIMEOUT=1, }; enum { NET_LLC2_ACK_TIMEOUT=1, NET_LLC2_P_TIMEOUT=2, NET_LLC2_REJ_TIMEOUT=3, NET_LLC2_BUSY_TIMEOUT=4, }; enum { NET_ATALK_AARP_EXPIRY_TIME=1, NET_ATALK_AARP_TICK_TIME=2, NET_ATALK_AARP_RETRANSMIT_LIMIT=3, NET_ATALK_AARP_RESOLVE_TIME=4 }; enum { NET_NETROM_DEFAULT_PATH_QUALITY=1, NET_NETROM_OBSOLESCENCE_COUNT_INITIALISER=2, NET_NETROM_NETWORK_TTL_INITIALISER=3, NET_NETROM_TRANSPORT_TIMEOUT=4, NET_NETROM_TRANSPORT_MAXIMUM_TRIES=5, NET_NETROM_TRANSPORT_ACKNOWLEDGE_DELAY=6, NET_NETROM_TRANSPORT_BUSY_DELAY=7, NET_NETROM_TRANSPORT_REQUESTED_WINDOW_SIZE=8, NET_NETROM_TRANSPORT_NO_ACTIVITY_TIMEOUT=9, NET_NETROM_ROUTING_CONTROL=10, NET_NETROM_LINK_FAILS_COUNT=11, NET_NETROM_RESET=12 }; enum { NET_AX25_IP_DEFAULT_MODE=1, NET_AX25_DEFAULT_MODE=2, NET_AX25_BACKOFF_TYPE=3, NET_AX25_CONNECT_MODE=4, NET_AX25_STANDARD_WINDOW=5, NET_AX25_EXTENDED_WINDOW=6, NET_AX25_T1_TIMEOUT=7, NET_AX25_T2_TIMEOUT=8, NET_AX25_T3_TIMEOUT=9, NET_AX25_IDLE_TIMEOUT=10, NET_AX25_N2=11, NET_AX25_PACLEN=12, NET_AX25_PROTOCOL=13, NET_AX25_DAMA_SLAVE_TIMEOUT=14 }; enum { NET_ROSE_RESTART_REQUEST_TIMEOUT=1, NET_ROSE_CALL_REQUEST_TIMEOUT=2, NET_ROSE_RESET_REQUEST_TIMEOUT=3, NET_ROSE_CLEAR_REQUEST_TIMEOUT=4, NET_ROSE_ACK_HOLD_BACK_TIMEOUT=5, NET_ROSE_ROUTING_CONTROL=6, NET_ROSE_LINK_FAIL_TIMEOUT=7, NET_ROSE_MAX_VCS=8, NET_ROSE_WINDOW_SIZE=9, NET_ROSE_NO_ACTIVITY_TIMEOUT=10 }; enum { NET_X25_RESTART_REQUEST_TIMEOUT=1, NET_X25_CALL_REQUEST_TIMEOUT=2, NET_X25_RESET_REQUEST_TIMEOUT=3, NET_X25_CLEAR_REQUEST_TIMEOUT=4, NET_X25_ACK_HOLD_BACK_TIMEOUT=5, NET_X25_FORWARD=6 }; enum { NET_TR_RIF_TIMEOUT=1 }; enum { NET_DECNET_NODE_TYPE = 1, NET_DECNET_NODE_ADDRESS = 2, NET_DECNET_NODE_NAME = 3, NET_DECNET_DEFAULT_DEVICE = 4, NET_DECNET_TIME_WAIT = 5, NET_DECNET_DN_COUNT = 6, NET_DECNET_DI_COUNT = 7, NET_DECNET_DR_COUNT = 8, NET_DECNET_DST_GC_INTERVAL = 9, NET_DECNET_CONF = 10, NET_DECNET_NO_FC_MAX_CWND = 11, NET_DECNET_MEM = 12, NET_DECNET_RMEM = 13, NET_DECNET_WMEM = 14, NET_DECNET_DEBUG_LEVEL = 255 }; enum { NET_DECNET_CONF_LOOPBACK = -2, NET_DECNET_CONF_DDCMP = -3, NET_DECNET_CONF_PPP = -4, NET_DECNET_CONF_X25 = -5, NET_DECNET_CONF_GRE = -6, NET_DECNET_CONF_ETHER = -7 }; enum { NET_DECNET_CONF_DEV_PRIORITY = 1, NET_DECNET_CONF_DEV_T1 = 2, NET_DECNET_CONF_DEV_T2 = 3, NET_DECNET_CONF_DEV_T3 = 4, NET_DECNET_CONF_DEV_FORWARDING = 5, NET_DECNET_CONF_DEV_BLKSIZE = 6, NET_DECNET_CONF_DEV_STATE = 7 }; enum { NET_SCTP_RTO_INITIAL = 1, NET_SCTP_RTO_MIN = 2, NET_SCTP_RTO_MAX = 3, NET_SCTP_RTO_ALPHA = 4, NET_SCTP_RTO_BETA = 5, NET_SCTP_VALID_COOKIE_LIFE = 6, NET_SCTP_ASSOCIATION_MAX_RETRANS = 7, NET_SCTP_PATH_MAX_RETRANS = 8, NET_SCTP_MAX_INIT_RETRANSMITS = 9, NET_SCTP_HB_INTERVAL = 10, NET_SCTP_PRESERVE_ENABLE = 11, NET_SCTP_MAX_BURST = 12, NET_SCTP_ADDIP_ENABLE = 13, NET_SCTP_PRSCTP_ENABLE = 14, NET_SCTP_SNDBUF_POLICY = 15, NET_SCTP_SACK_TIMEOUT = 16, NET_SCTP_RCVBUF_POLICY = 17, }; enum { NET_BRIDGE_NF_CALL_ARPTABLES = 1, NET_BRIDGE_NF_CALL_IPTABLES = 2, NET_BRIDGE_NF_CALL_IP6TABLES = 3, NET_BRIDGE_NF_FILTER_VLAN_TAGGED = 4, NET_BRIDGE_NF_FILTER_PPPOE_TAGGED = 5, }; enum { NET_IRDA_DISCOVERY=1, NET_IRDA_DEVNAME=2, NET_IRDA_DEBUG=3, NET_IRDA_FAST_POLL=4, NET_IRDA_DISCOVERY_SLOTS=5, NET_IRDA_DISCOVERY_TIMEOUT=6, NET_IRDA_SLOT_TIMEOUT=7, NET_IRDA_MAX_BAUD_RATE=8, NET_IRDA_MIN_TX_TURN_TIME=9, NET_IRDA_MAX_TX_DATA_SIZE=10, NET_IRDA_MAX_TX_WINDOW=11, NET_IRDA_MAX_NOREPLY_TIME=12, NET_IRDA_WARN_NOREPLY_TIME=13, NET_IRDA_LAP_KEEPALIVE_TIME=14, }; enum { FS_NRINODE=1, FS_STATINODE=2, FS_MAXINODE=3, FS_NRDQUOT=4, FS_MAXDQUOT=5, FS_NRFILE=6, FS_MAXFILE=7, FS_DENTRY=8, FS_NRSUPER=9, FS_MAXSUPER=10, FS_OVERFLOWUID=11, FS_OVERFLOWGID=12, FS_LEASES=13, FS_DIR_NOTIFY=14, FS_LEASE_TIME=15, FS_DQSTATS=16, FS_XFS=17, FS_AIO_NR=18, FS_AIO_MAX_NR=19, FS_INOTIFY=20, FS_OCFS2=988, }; enum { FS_DQ_LOOKUPS = 1, FS_DQ_DROPS = 2, FS_DQ_READS = 3, FS_DQ_WRITES = 4, FS_DQ_CACHE_HITS = 5, FS_DQ_ALLOCATED = 6, FS_DQ_FREE = 7, FS_DQ_SYNCS = 8, FS_DQ_WARNINGS = 9, }; enum { DEV_CDROM=1, DEV_HWMON=2, DEV_PARPORT=3, DEV_RAID=4, DEV_MAC_HID=5, DEV_SCSI=6, DEV_IPMI=7, }; enum { DEV_CDROM_INFO=1, DEV_CDROM_AUTOCLOSE=2, DEV_CDROM_AUTOEJECT=3, DEV_CDROM_DEBUG=4, DEV_CDROM_LOCK=5, DEV_CDROM_CHECK_MEDIA=6 }; enum { DEV_PARPORT_DEFAULT=-3 }; enum { DEV_RAID_SPEED_LIMIT_MIN=1, DEV_RAID_SPEED_LIMIT_MAX=2 }; enum { DEV_PARPORT_DEFAULT_TIMESLICE=1, DEV_PARPORT_DEFAULT_SPINTIME=2 }; enum { DEV_PARPORT_SPINTIME=1, DEV_PARPORT_BASE_ADDR=2, DEV_PARPORT_IRQ=3, DEV_PARPORT_DMA=4, DEV_PARPORT_MODES=5, DEV_PARPORT_DEVICES=6, DEV_PARPORT_AUTOPROBE=16 }; enum { DEV_PARPORT_DEVICES_ACTIVE=-3, }; enum { DEV_PARPORT_DEVICE_TIMESLICE=1, }; enum { DEV_MAC_HID_KEYBOARD_SENDS_LINUX_KEYCODES=1, DEV_MAC_HID_KEYBOARD_LOCK_KEYCODES=2, DEV_MAC_HID_MOUSE_BUTTON_EMULATION=3, DEV_MAC_HID_MOUSE_BUTTON2_KEYCODE=4, DEV_MAC_HID_MOUSE_BUTTON3_KEYCODE=5, DEV_MAC_HID_ADB_MOUSE_SENDS_KEYCODES=6 }; enum { DEV_SCSI_LOGGING_LEVEL=1, }; enum { DEV_IPMI_POWEROFF_POWERCYCLE=1, }; enum { ABI_DEFHANDLER_COFF=1, ABI_DEFHANDLER_ELF=2, ABI_DEFHANDLER_LCALL7=3, ABI_DEFHANDLER_LIBCSO=4, ABI_TRACE=5, ABI_FAKE_UTSNAME=6, }; #line 45 "/usr/include/sys/sysctl.h" #line 63 "/usr/include/sys/sysctl.h" extern int sysctl (int *__name, int __nlen, void *__oldval, size_t *__oldlenp, void *__newval, size_t __newlen) ; #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Defined "HAVE_SYS_SYSCTL_H" to "1" ================================================================================ TEST checkSharedLibrary from config.packages.pthread(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:626) TESTING: checkSharedLibrary from config.packages.pthread(config/BuildSystem/config/package.py:626) By default we don't care about checking if the library is shared Popping language C ================================================================================ TEST alternateConfigureLibrary from config.packages.mpe(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.mpe(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.papi(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.papi(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.scientificpython(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.scientificpython(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.fiat(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.fiat(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST configureScalarType from PETSc.options.scalarTypes(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/scalarTypes.py:37) TESTING: configureScalarType from PETSc.options.scalarTypes(config/PETSc/options/scalarTypes.py:37) Choose between real and complex numbers Defined "USE_SCALAR_REAL" to "1" Scalar type is real Pushing language C All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0; int a = isnormal(b); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest.o: In function `main': conftest.c:(.text+0x2c): undefined reference to `isnormal' Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0; int a = isnan(b); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_ISNAN" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0; int a = isinf(b); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_ISINF" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0;int a = _isnan(b); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest.o: In function `main': conftest.c:(.text+0x2c): undefined reference to `_isnan' Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0;int a = _finite(b); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes/conftest.o: In function `main': conftest.c:(.text+0x2c): undefined reference to `_finite' Popping language C ================================================================================ TEST configurePrecision from PETSc.options.scalarTypes(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/options/scalarTypes.py:77) TESTING: configurePrecision from PETSc.options.scalarTypes(config/PETSc/options/scalarTypes.py:77) Set the default real number precision for PETSc objects Defined "USE_REAL_DOUBLE" to "1" Defined make macro "PETSC_SCALAR_SIZE" to "64" Precision is double ================================================================================ TEST alternateConfigureLibrary from config.packages.opencl(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.opencl(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.viennacl(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.viennacl(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.cuda(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.cuda(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.cusp(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.cusp(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST locateCMake from config.packages.cmake(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/cmake.py:32) TESTING: locateCMake from config.packages.cmake(config/BuildSystem/config/packages/cmake.py:32) Looking for default CMake executable Checking for program /opt/FJSVtclang/check/cmake...not found Checking for program /opt/FJSVtclang/GM-1.2.0-20/bin/cmake...not found Checking for program /opt/kusu/bin/cmake...not found Checking for program /opt/kusu/sbin/cmake...not found Checking for program /usr/pgsql-9.0/bin/cmake...not found Checking for program /usr/local/bin/cmake...not found Checking for program /bin/cmake...not found Checking for program /usr/bin/cmake...not found Checking for program /home/hp150306/t00196/bin/cmake...not found Checking for program /home/hp150306/t00196/shortcut/cmake...not found Checking for program /opt/FJSVxosmmm/sbin/cmake...not found Checking for program /home/hp150306/t00196/cmake...not found Checking for program /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/bin/win32fe/cmake...not found ================================================================================ TEST alternateConfigureLibrary from config.packages.metis(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.metis(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.parmetis(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.parmetis(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.Zoltan(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.Zoltan(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.fblaslapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.fblaslapack(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.f2cblaslapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.f2cblaslapack(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST configureLibrary from config.packages.BlasLapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/BlasLapack.py:333) TESTING: configureLibrary from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:333) ================================================================================ Checking for a functional BLAS and LAPACK in User specified BLAS/LAPACK library ================================================================================ TEST checkLib from config.packages.BlasLapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/BlasLapack.py:100) TESTING: checkLib from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:100) Checking for BLAS and LAPACK symbols Checking for functions [ddot_] in library ['-SSL2'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot_(); static void _check_ddot_() { ddot_(); } int main() { _check_ddot_();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Checking for functions [dgetrs_] in library ['-SSL2'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgetrs_(); static void _check_dgetrs_() { dgetrs_(); } int main() { _check_dgetrs_();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Checking for functions [dgeev_] in library ['-SSL2'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgeev_(); static void _check_dgeev_() { dgeev_(); } int main() { _check_dgeev_();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Found Fortran mangling on BLAS/LAPACK which is underscore Defined "BLASLAPACK_UNDERSCORE" to "1" ================================================================================ TEST check64BitBLASIndices from config.packages.BlasLapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/BlasLapack.py:466) TESTING: check64BitBLASIndices from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:466) Check for and use 64bit integer blas ================================================================================ TEST checkESSL from config.packages.BlasLapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/BlasLapack.py:396) TESTING: checkESSL from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:396) Check for the IBM ESSL library Checking for functions [iessl] in library ['-SSL2'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char iessl(); static void _check_iessl() { iessl(); } int main() { _check_iessl();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o: In function `_check_iessl': conftest.c:(.text+0x4): undefined reference to `iessl' Popping language C ================================================================================ TEST checkPESSL from config.packages.BlasLapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/BlasLapack.py:408) TESTING: checkPESSL from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:408) Check for the IBM PESSL library - and error out - if used instead of ESSL Checking for functions [ipessl] in library ['-SSL2'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ipessl(); static void _check_ipessl() { ipessl(); } int main() { _check_ipessl();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o: In function `_check_ipessl': conftest.c:(.text+0x4): undefined reference to `ipessl' Popping language C ================================================================================ TEST checkMKL from config.packages.BlasLapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/BlasLapack.py:402) TESTING: checkMKL from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:402) Check for Intel MKL library Checking for functions [mkl_set_num_threads] in library ['-SSL2'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char mkl_set_num_threads(); static void _check_mkl_set_num_threads() { mkl_set_num_threads(); } int main() { _check_mkl_set_num_threads();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Possible ERROR while running linker: exit code 256 stderr: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o: In function `_check_mkl_set_num_threads': conftest.c:(.text+0x4): undefined reference to `mkl_set_num_threads' Popping language C ================================================================================ TEST checkMissing from config.packages.BlasLapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/BlasLapack.py:431) TESTING: checkMissing from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:431) Check for missing LAPACK routines Checking for functions [dtrsen_ dgerfs_ dgges_ dtgsen_ dgesvd_ dgetrf_ dgetrs_ dgeev_ dgelss_ dsyev_ dsyevx_ dsygv_ dsygvx_ dpotrf_ dpotrs_ dstebz_ dpttrf_ dpttrs_ dstein_ dorgqr_ dgeqrf_ dgesv_ dhseqr_ dsteqr_] in library ['-SSL2'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dtrsen_(); static void _check_dtrsen_() { dtrsen_(); } char dgerfs_(); static void _check_dgerfs_() { dgerfs_(); } char dgges_(); static void _check_dgges_() { dgges_(); } char dtgsen_(); static void _check_dtgsen_() { dtgsen_(); } char dgesvd_(); static void _check_dgesvd_() { dgesvd_(); } char dgetrf_(); static void _check_dgetrf_() { dgetrf_(); } char dgetrs_(); static void _check_dgetrs_() { dgetrs_(); } char dgeev_(); static void _check_dgeev_() { dgeev_(); } char dgelss_(); static void _check_dgelss_() { dgelss_(); } char dsyev_(); static void _check_dsyev_() { dsyev_(); } char dsyevx_(); static void _check_dsyevx_() { dsyevx_(); } char dsygv_(); static void _check_dsygv_() { dsygv_(); } char dsygvx_(); static void _check_dsygvx_() { dsygvx_(); } char dpotrf_(); static void _check_dpotrf_() { dpotrf_(); } char dpotrs_(); static void _check_dpotrs_() { dpotrs_(); } char dstebz_(); static void _check_dstebz_() { dstebz_(); } char dpttrf_(); static void _check_dpttrf_() { dpttrf_(); } char dpttrs_(); static void _check_dpttrs_() { dpttrs_(); } char dstein_(); static void _check_dstein_() { dstein_(); } char dorgqr_(); static void _check_dorgqr_() { dorgqr_(); } char dgeqrf_(); static void _check_dgeqrf_() { dgeqrf_(); } char dgesv_(); static void _check_dgesv_() { dgesv_(); } char dhseqr_(); static void _check_dhseqr_() { dhseqr_(); } char dsteqr_(); static void _check_dsteqr_() { dsteqr_(); } int main() { _check_dtrsen_(); _check_dgerfs_(); _check_dgges_(); _check_dtgsen_(); _check_dgesvd_(); _check_dgetrf_(); _check_dgetrs_(); _check_dgeev_(); _check_dgelss_(); _check_dsyev_(); _check_dsyevx_(); _check_dsygv_(); _check_dsygvx_(); _check_dpotrf_(); _check_dpotrs_(); _check_dstebz_(); _check_dpttrf_(); _check_dpttrs_(); _check_dstein_(); _check_dorgqr_(); _check_dgeqrf_(); _check_dgesv_(); _check_dhseqr_(); _check_dsteqr_();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C ================================================================================ TEST checklsame from config.packages.BlasLapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/BlasLapack.py:444) TESTING: checklsame from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:444) Do the BLAS/LAPACK libraries have a valid lsame() function with correction binding. Lion and xcode 4.2 do not Checking for functions [lsame_] in library ['-SSL2'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char lsame_(); static void _check_lsame_() { lsame_(); } int main() { _check_lsame_();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C ================================================================================ TEST checksdotreturnsdouble from config.packages.BlasLapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/packages/BlasLapack.py:501) TESTING: checksdotreturnsdouble from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:501) Determines if BLAS sdot routine returns a float or a double Checking if sdot() returns a float or a double Pushing language C All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *output = fopen("runtimetestoutput","w"); extern float sdot_(int*,float*,int *,float*,int*); float x1[1] = {3.0}; int one1 = 1; float sdotresult = sdot_(&one1,x1,&one1,x1,&one1); fprintf(output, " '--known-sdot-returns-double=%d',\n",(sdotresult != 9.0)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack/conftest.o -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack/conftest Popping language C Checking if snrm() returns a float or a double Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *output = fopen("runtimetestoutput","w"); extern float snrm2_(int*,float*,int*); float x2[1] = {3.0}; int one2 = 1; float normresult = snrm2_(&one2,x2,&one2); fprintf(output, " '--known-snrm2-returns-double=%d',\n",(normresult != 3.0)); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack/conftest.o -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Testing executable /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack/conftest to see if it can be run Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack/conftest Executing: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack/conftest Popping language C ================================================================================ TEST alternateConfigureLibrary from config.packages.SuperLU_MT(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.SuperLU_MT(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.pARMS(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.pARMS(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.SuiteSparse(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.SuiteSparse(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.ml(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.ml(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.spai(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.spai(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.mkl_cpardiso(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.mkl_cpardiso(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.sundials(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.sundials(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.elemental(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.elemental(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST configureRegression from PETSc.Regression(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Regression.py:33) TESTING: configureRegression from PETSc.Regression(config/PETSc/Regression.py:33) Output a file listing the jobs that should be run by the PETSc buildtest Defined make macro "TEST_RUNS" to "C Fortran SSL OPENMP Cxx F90 F90_NoComplex F2003 Fortran_NoComplex C_NoComplex" ================================================================================ TEST alternateConfigureLibrary from config.packages.PaStiX(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.PaStiX(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default Pushing language C ================================================================================ TEST configureLibrary from config.packages.scalapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:572) TESTING: configureLibrary from config.packages.scalapack(config/BuildSystem/config/package.py:572) Find an installation and check if it can work with PETSc ================================================================================== Checking for a functional scalapack Checking for library in User specified SCALAPACK libraries: ['-SCALAPACK'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [pssytrd_] in library ['-SCALAPACK'] ['-SSL2'] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char pssytrd_(); static void _check_pssytrd_() { pssytrd_(); } int main() { _check_pssytrd_();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -SCALAPACK -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Checking for headers User specified SCALAPACK libraries: [] ================================================================================ TEST checkSharedLibrary from config.packages.scalapack(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:626) TESTING: checkSharedLibrary from config.packages.scalapack(config/BuildSystem/config/package.py:626) By default we don't care about checking if the library is shared Popping language C ================================================================================ TEST alternateConfigureLibrary from config.packages.MUMPS(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.MUMPS(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.mkl_pardiso(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.mkl_pardiso(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.SuperLU_DIST(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.SuperLU_DIST(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.SuperLU(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.SuperLU(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.Chombo(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.Chombo(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default Checking for functions [dgels_] in library ['-SSL2'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgels_(); static void _check_dgels_() { dgels_(); } int main() { _check_dgels_();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Found dgels() in Lapack library as needed by hypre Pushing language C ================================================================================ TEST configureLibrary from config.packages.hypre(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:572) TESTING: configureLibrary from config.packages.hypre(config/BuildSystem/config/package.py:572) Find an installation and check if it can work with PETSc ================================================================================== Checking for a functional hypre Checking for library in User specified root directory HYPRE: ['/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib/libHYPRE.a', '-ltrtmetcpp', '-L/opt/FJSVpxtof/sparc64fx/lib64', '-L/opt/FJSVtclang/GM-1.2.0-20/lib64', '-L//opt/FJSVtclang/GM-1.2.0-20/lib64', '-L/opt/FJSVxosmmm/lib64', '-lmpi_cxx', '-lfjdemgl', '-lstd_mt', '-lpthread', '-lstdc++'] Contents: ['lib', 'include'] ================================================================================ TEST check from config.libraries(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/libraries.py:146) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:146) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for functions [HYPRE_IJMatrixCreate] in library ['/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib/libHYPRE.a', '-ltrtmetcpp', '-L/opt/FJSVpxtof/sparc64fx/lib64', '-L/opt/FJSVtclang/GM-1.2.0-20/lib64', '-L//opt/FJSVtclang/GM-1.2.0-20/lib64', '-L/opt/FJSVxosmmm/lib64', '-lmpi_cxx', '-lfjdemgl', '-lstd_mt', '-lpthread', '-lstdc++'] ['-SSL2'] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char HYPRE_IJMatrixCreate(); static void _check_HYPRE_IJMatrixCreate() { HYPRE_IJMatrixCreate(); } int main() { _check_HYPRE_IJMatrixCreate();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -Wl,-rpath,/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -L/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -lHYPRE -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -SSL2 -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_LIBHYPRE" to "1" Defined "HAVE_LIBTRTMETCPP" to "1" Defined "HAVE_LIBMPI_CXX" to "1" Defined "HAVE_LIBFJDEMGL" to "1" Defined "HAVE_LIBSTD_MT" to "1" Defined "HAVE_LIBPTHREAD" to "1" Defined "HAVE_LIBSTDC__" to "1" Popping language C Checking for headers User specified root directory HYPRE: ['/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include'] Pushing language C ================================================================================ TEST checkInclude from config.headers(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['HYPRE.h'] in ['/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include'] Checking include with compiler flags var CPPFLAGS ['/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include', '/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu'] Executing: mpifcc -E -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c stdout: #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "//opt/FJSVtclang/GM-1.2.0-20/bin/../lib/c99.pre" #pragma unknown_control_flow(_setjmp) #pragma unknown_control_flow(__setjmp) #pragma unknown_control_flow(__sigsetjmp) #pragma unknown_control_flow(vfork) #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/confdefs.h" #line 2 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conffix.h" #line 3 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" #line 1 "/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include/HYPRE.h" #line 4 "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers/conftest.c" Preprocess stderr before filtering:: Preprocess stderr after filtering:: Found header files ['HYPRE.h'] in ['/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include'] Popping language C ================================================================================ TEST checkSharedLibrary from config.packages.hypre(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:626) TESTING: checkSharedLibrary from config.packages.hypre(config/BuildSystem/config/package.py:626) By default we don't care about checking if the library is shared Popping language C ================================================================================ TEST alternateConfigureLibrary from config.packages.Trilinos(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/BuildSystem/config/package.py:630) TESTING: alternateConfigureLibrary from config.packages.Trilinos(config/BuildSystem/config/package.py:630) Called if --with-packagename=0; does nothing by default ================================================================================ TEST configureRTLDDefault from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:774) TESTING: configureRTLDDefault from PETSc.Configure(config/PETSc/Configure.py:774) All intermediate test results are stored in /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c Possible ERROR while running compiler: exit code 512 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c", line 4: error: identifier "RTLD_DEFAULT" is undefined void *ptr = RTLD_DEFAULT; ^ 1 error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c". Source: #include "confdefs.h" #include "conffix.h" #include void *ptr = RTLD_DEFAULT; int main() { ; return 0; } ================================================================================ TEST configurePrefetch from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:624) TESTING: configurePrefetch from PETSc.Configure(config/PETSc/Configure.py:624) Sees if there are any prefetch functions supported Executing: uname -s stdout: Linux Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c", line 3: catastrophic error: cannot open source file "xmmintrin.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { void *v = 0;_mm_prefetch((const char*)v,_MM_HINT_NTA); ; return 0; } Compile failed inside link Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c", line 3: catastrophic error: cannot open source file "xmmintrin.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { void *v = 0;_mm_prefetch(v,_MM_HINT_NTA); ; return 0; } Compile failed inside link Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { void *v = 0;__builtin_prefetch(v,0,0); ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "Prefetch(a,b,c)" to "__builtin_prefetch((a),(b),(c))" Defined "PREFETCH_HINT_NTA" to "0" Defined "PREFETCH_HINT_T0" to "3" Defined "PREFETCH_HINT_T1" to "2" Defined "PREFETCH_HINT_T2" to "1" Popping language C ================================================================================ TEST configureUnused from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:685) TESTING: configureUnused from PETSc.Configure(config/PETSc/Configure.py:685) Sees if __attribute((unused)) is supported Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" __attribute((unused)) static int myfunc(__attribute((unused)) void *name){ return 1;} int main() { int i = 0; int j = myfunc(&i); typedef void* atype; __attribute((unused)) atype a; ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "UNUSED" to "__attribute((unused))" Popping language C ================================================================================ TEST configureDeprecated from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:703) TESTING: configureDeprecated from PETSc.Configure(config/PETSc/Configure.py:703) Check if __attribute((deprecated)) is supported Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c", line 3: warning: function "myfunc" was declared but never referenced __attribute((deprecated)) static int myfunc(void) { return 1;} ^ Source: #include "confdefs.h" #include "conffix.h" __attribute((deprecated)) static int myfunc(void) { return 1;} int main() { ; return 0; } Defined "DEPRECATED(why)" to "__attribute((deprecated))" Popping language C ================================================================================ TEST configureIsatty from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:697) TESTING: configureIsatty from PETSc.Configure(config/PETSc/Configure.py:697) Check if the Unix C function isatty() works correctly Actually just assumes it does not work correctly on batch systems Defined "USE_ISATTY" to "1" ================================================================================ TEST configureExpect from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:723) TESTING: configureExpect from PETSc.Configure(config/PETSc/Configure.py:723) Sees if the __builtin_expect directive is supported Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { if (__builtin_expect(0,1)) return 1;; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_BUILTIN_EXPECT" to "1" Popping language C ================================================================================ TEST configureFunctionName from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:730) TESTING: configureFunctionName from PETSc.Configure(config/PETSc/Configure.py:730) Sees if the compiler supports __func__ or a variant. Falls back on __FUNCT__ which PETSc source defines, but most users do not, thus stack traces through user code are better when the compiler's variant is used. Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { if (__func__[0] != 'm') return 1;; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Defined "FUNCTION_NAME_C" to "__func__" Pushing language Cxx Executing: mpiFCC -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.cc Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { if (__func__[0] != 'm') return 1;; return 0; } Pushing language CXX Popping language CXX Executing: mpiFCC -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language Cxx Defined "FUNCTION_NAME_CXX" to "__func__" ================================================================================ TEST configureIntptrt from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:752) TESTING: configureIntptrt from PETSc.Configure(config/PETSc/Configure.py:752) Determine what to use for uintptr_t Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c", line 6: warning: variable "i" was declared but never referenced int x; uintptr_t i = (uintptr_t)&x;; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { int x; uintptr_t i = (uintptr_t)&x;; return 0; } Defined "UINTPTR_T" to "uintptr_t" Popping language C ================================================================================ TEST configureSolaris from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:779) TESTING: configureSolaris from PETSc.Configure(config/PETSc/Configure.py:779) Solaris specific stuff ================================================================================ TEST configureLinux from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:792) TESTING: configureLinux from PETSc.Configure(config/PETSc/Configure.py:792) Linux specific stuff Defined "HAVE_DOUBLE_ALIGN_MALLOC" to "1" ================================================================================ TEST configureWin32 from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:798) TESTING: configureWin32 from PETSc.Configure(config/PETSc/Configure.py:798) Win32 non-cygwin specific stuff Checking for functions [GetComputerName] in library ['Kernel32.lib'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c", line 4: catastrophic error: cannot open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_GetComputerName() { GetComputerName(NULL,NULL);; } int main() { _check_GetComputerName();; return 0; } Compile failed inside link Popping language C Checking for functions [GetComputerName] in library ['kernel32'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c", line 4: catastrophic error: cannot open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_GetComputerName() { GetComputerName(NULL,NULL);; } int main() { _check_GetComputerName();; return 0; } Compile failed inside link Popping language C Checking for functions [GetUserName] in library ['Advapi32.lib'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c", line 4: catastrophic error: cannot open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_GetUserName() { GetUserName(NULL,NULL);; } int main() { _check_GetUserName();; return 0; } Compile failed inside link Popping language C Checking for functions [GetUserName] in library ['advapi32'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c", line 4: catastrophic error: cannot open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_GetUserName() { GetUserName(NULL,NULL);; } int main() { _check_GetUserName();; return 0; } Compile failed inside link Popping language C Checking for functions [GetDC] in library ['User32.lib'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c", line 4: catastrophic error: cannot open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_GetDC() { GetDC(0);; } int main() { _check_GetDC();; return 0; } Compile failed inside link Popping language C Checking for functions [GetDC] in library ['user32'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c", line 4: catastrophic error: cannot open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_GetDC() { GetDC(0);; } int main() { _check_GetDC();; return 0; } Compile failed inside link Popping language C Checking for functions [CreateCompatibleDC] in library ['Gdi32.lib'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c", line 4: catastrophic error: cannot open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_CreateCompatibleDC() { CreateCompatibleDC(0);; } int main() { _check_CreateCompatibleDC();; return 0; } Compile failed inside link Popping language C Checking for functions [CreateCompatibleDC] in library ['gdi32'] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c", line 4: catastrophic error: cannot open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include static void _check_CreateCompatibleDC() { CreateCompatibleDC(0);; } int main() { _check_CreateCompatibleDC();; return 0; } Compile failed inside link Popping language C Checking for type: int32_t Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types/conftest.c", line 13: warning: variable "a" was declared but never referenced int32_t a;; ^ Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { int32_t a;; return 0; } int32_t found Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c", line 6: warning: variable "u" was declared but never referenced uid_t u; ^ Source: #include "confdefs.h" #include "conffix.h" #include int main() { uid_t u; ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c Possible ERROR while running compiler: stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c", line 8: warning: variable "a" was declared but never referenced int a=R_OK; ^ Source: #include "confdefs.h" #include "conffix.h" #if defined(PETSC_HAVE_UNISTD_H) #include #endif int main() { int a=R_OK; ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int a=0; if (S_ISDIR(a)){} ; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c", line 3: catastrophic error: cannot open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" #include int main() { LARGE_INTEGER a; DWORD b=a.u.HighPart; ; return 0; } Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c Possible ERROR while running compiler: exit code 1024 stderr: "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c", line 3: catastrophic error: cannot open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c". Compilation terminated. Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { int flags = O_BINARY;; return 0; } Defined "PATH_SEPARATOR" to "':'" Defined "REPLACE_DIR_SEPARATOR" to "'\\'" Defined "DIR_SEPARATOR" to "'/'" Defined "DIR" to ""/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3"" ================================================================================ TEST configureCygwinBrokenPipe from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:868) TESTING: configureCygwinBrokenPipe from PETSc.Configure(config/PETSc/Configure.py:868) Cygwin version <= 1.7.18 had issues with pipes and long commands invoked from gnu-make http://cygwin.com/ml/cygwin/2013-05/msg00340.html Executing: uname -s stdout: Linux ================================================================================ TEST configureDefaultArch from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:884) TESTING: configureDefaultArch from PETSc.Configure(config/PETSc/Configure.py:884) ================================================================================ TEST configureScript from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:901) TESTING: configureScript from PETSc.Configure(config/PETSc/Configure.py:901) Output a script in the conf directory which will reproduce the configuration ================================================================================ TEST configureInstall from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:938) TESTING: configureInstall from PETSc.Configure(config/PETSc/Configure.py:938) Setup the directories for installation Defined make rule "shared_install" with dependencies "" and code ['- at echo "Now to install the libraries do:"', '- at echo "make PETSC_DIR=${PETSC_DIR} PETSC_ARCH=${PETSC_ARCH} install"', '- at echo "========================================="'] ================================================================================ TEST configureGCOV from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:950) TESTING: configureGCOV from PETSc.Configure(config/PETSc/Configure.py:950) ================================================================================ TEST configureFortranFlush from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:955) TESTING: configureFortranFlush from PETSc.Configure(config/PETSc/Configure.py:955) Checking for functions [flush_] in library [''] [] Pushing language C Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char flush_(); static void _check_flush_() { flush_(); } int main() { _check_flush_();; return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Popping language C Defined "HAVE_FLUSH" to "1" ================================================================================ TEST configureAtoll from PETSc.Configure(/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/config/PETSc/Configure.py:680) TESTING: configureAtoll from PETSc.Configure(config/PETSc/Configure.py:680) Checks if atoll exists Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #define _POSIX_C_SOURCE 200112L #include int main() { long v = atoll("25"); return 0; } Pushing language C Popping language C Executing: mpifcc -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl Defined "HAVE_ATOLL" to "1" Defined make rule "remote" with dependencies "" and code [] Defined make rule "remoteclean" with dependencies "" and code [] Pushing language C Defined make macro "CC_FLAGS" to "-Xg -O0 -Kopenmp " Popping language C Pushing language Cxx Defined make macro "CXX_FLAGS" to "-Xg -O0 -Kopenmp " Popping language Cxx Defined make macro "CPP_FLAGS" to "" Pushing language C Defined make macro "PCC" to "mpifcc" Defined make macro "PCC_FLAGS" to "-Xg -O0 -Kopenmp " Popping language C Defined make macro "CC_SUFFIX" to "o" Pushing language C Defined make macro "PCC_LINKER" to "mpifcc" Defined make macro "PCC_LINKER_FLAGS" to " -Xg -O0 -Kopenmp" Popping language C Defined make macro "CC_LINKER_SUFFIX" to "" Pushing language FC Defined "HAVE_FORTRAN" to "1" Defined make macro "FPP_FLAGS" to "" Defined make macro "FC_FLAGS" to "-X9 -O0 -Kopenmp " Popping language FC Defined make macro "FC_SUFFIX" to "o" Pushing language FC Executing: mpifrt -V Defined make macro "FC_LINKER" to "mpifrt" Defined make macro "FC_LINKER_FLAGS" to " -X9 -O0 -Kopenmp" Popping language FC Defined make macro "FC_MODULE_FLAG" to "-I" Defined make macro "FC_MODULE_OUTPUT_FLAG" to "-M" Pushing language C Defined make macro "SL_LINKER" to "mpifcc" Defined make macro "SL_LINKER_FLAGS" to "${PCC_LINKER_FLAGS}" Popping language C Defined make macro "SL_LINKER_SUFFIX" to "" Defined "SLSUFFIX" to """" Defined make macro "SL_LINKER_LIBS" to "${PETSC_EXTERNAL_LIB_BASIC}" Defined make macro "PETSC_LANGUAGE" to "CONLY" Defined make macro "PETSC_SCALAR" to "real" Defined make macro "PETSC_PRECISION" to "double" Executing: CC -VV Defined "USE_SOCKET_VIEWER" to "1" Executing: mpifcc -c -o /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.o -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.compilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.closure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.headers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.cacheDetails -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.atomics -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.functions -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.featureTestMacros -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.utilities.missing -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.MPI -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.setCompilers -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.pthread -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.options.scalarTypes -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.packages.BlasLapack -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.types -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/config.libraries -Xg -O0 -Kopenmp /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-x3RW_Z/PETSc.Configure/conftest.c Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { setsockopt(0,SOL_SOCKET,SO_REUSEADDR,0,0); return 0; } Defined "HAVE_SO_REUSEADDR" to "1" Defined "HAVE_HYPRE" to "1" Defined make macro "HYPRE_LIB" to "-Wl,-rpath,/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -L/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -lHYPRE -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++" Defined make macro "HYPRE_INCLUDE" to "-I/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include" Defined make macro "SCALAPACK_LIB" to "-SCALAPACK" Defined make macro "SCALAPACK_INCLUDE" to "" Defined "HAVE_BLASLAPACK" to "1" Defined make macro "BLASLAPACK_LIB" to "-SSL2" Defined make macro "BLASLAPACK_INCLUDE" to "" Defined "HAVE_PTHREAD" to "1" Defined make macro "PTHREAD_LIB" to "" Defined make macro "PTHREAD_INCLUDE" to "" Defined "HAVE_OPENMP" to "1" Defined make macro "OPENMP_LIB" to "" Defined make macro "OPENMP_INCLUDE" to "" Defined "HAVE_SSL" to "1" Defined make macro "SSL_LIB" to "-lssl -lcrypto" Defined make macro "SSL_INCLUDE" to "" Defined "HAVE_MPI" to "1" Defined make macro "MPI_LIB" to "" Defined make macro "MPI_INCLUDE" to "-I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu" Defined make macro "PETSC_WITH_EXTERNAL_LIB" to "-L/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-3.6.3_debug/lib -lpetsc -Wl,-rpath,/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -L/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -lHYPRE -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -SCALAPACK -SSL2 -lssl -lcrypto -ltrtmetcpp -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl " Defined make macro "PETSC_EXTERNAL_LIB_BASIC" to "-Wl,-rpath,/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -L/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -lHYPRE -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -SCALAPACK -SSL2 -lssl -lcrypto -ltrtmetcpp -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl " Defined make macro "PETSC_CC_INCLUDES" to "-I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/include -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-3.6.3_debug/include -I/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu" Pushing language FC Popping language FC Pushing language FC Popping language FC Pushing language FC Popping language FC Pushing language FC Popping language FC Defined make macro "PETSC_FC_INCLUDES" to "-I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/include -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-3.6.3_debug/include -I/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu" Defined make macro "DESTDIR" to "/home/hp150306/t00196/lib/petsc-3.6.3_debug" Defined "LIB_DIR" to ""/home/hp150306/t00196/lib/petsc-3.6.3_debug/lib"" Defined make macro "LIBNAME" to "${INSTALL_LIB_DIR}/libpetsc.${AR_LIB_SUFFIX}" Defined make macro "SHLIBS" to "libpetsc" Defined make macro "PETSC_LIB_BASIC" to "-lpetsc" Defined make macro "PETSC_KSP_LIB_BASIC" to "-lpetsc" Defined make macro "PETSC_TS_LIB_BASIC" to "-lpetsc" Defined make macro "PETSC_TAO_LIB_BASIC" to "-lpetsc" Defined "USE_SINGLE_LIBRARY" to "1" Defined make macro "PETSC_SYS_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_VEC_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_MAT_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_DM_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_KSP_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_SNES_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_TS_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_TAO_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_CHARACTERISTIC_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_LIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_CONTRIB" to "${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "CONFIGURE_OPTIONS" to "--with-cc=mpifcc --with-cxx=mpiFCC --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS=\"-Xg -O0\" --CXX=mpiFCC --CXXFLAGS=\"-Xg -O0\" --FC=mpifrt --FFLAGS=\"-X9 -O0\" --LD_SHARED= --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 --with-scalapack-lib=-SCALAPACK --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 --with-hypre=1 --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4" Pushing language C Popping language C Pushing language FC Popping language FC Pushing language C Popping language C Pushing language FC Popping language FC Skipping cmakeboot due to old python version: (2, 6, 2, 'final', 0) Pushing language C Popping language C Pushing language FC Popping language FC ================================================================================ **** petsc-3.6.3_debug/lib/petsc/conf/petscvariables **** FC_DEFINE_FLAG = -D FAST_AR_FLAGS = Scq AR_FLAGS = cr FC_MODULE_OUTPUT_FLAG = -M PETSC_LANGUAGE = CONLY FC_LINKER_FLAGS = -X9 -O0 -Kopenmp LIBNAME = ${INSTALL_LIB_DIR}/libpetsc.${AR_LIB_SUFFIX} SL_LINKER = mpifcc CC_FLAGS = -Xg -O0 -Kopenmp PETSC_LIB = ${PETSC_WITH_EXTERNAL_LIB} PETSC_PRECISION = double OPENMP_LIB = FC_FLAGS = -X9 -O0 -Kopenmp BLASLAPACK_LIB = -SSL2 PETSC_MAT_LIB = ${PETSC_WITH_EXTERNAL_LIB} PCC = mpifcc SL_LINKER_LIBS = ${PETSC_EXTERNAL_LIB_BASIC} MPI_LIB = SSL_LIB = -lssl -lcrypto PETSC_EXTERNAL_LIB_BASIC = -Wl,-rpath,/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -L/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -lHYPRE -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -SCALAPACK -SSL2 -lssl -lcrypto -ltrtmetcpp -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl SL_LINKER_FLAGS = ${PCC_LINKER_FLAGS} CC_SUFFIX = o OPENMP_INCLUDE = SCALAPACK_INCLUDE = SHLIBS = libpetsc CONFIGURE_OPTIONS = --with-cc=mpifcc --with-cxx=mpiFCC --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS=\"-Xg -O0\" --CXX=mpiFCC --CXXFLAGS=\"-Xg -O0\" --FC=mpifrt --FFLAGS=\"-X9 -O0\" --LD_SHARED= --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 --with-scalapack-lib=-SCALAPACK --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 --with-hypre=1 --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4 PETSC_CHARACTERISTIC_LIB = ${PETSC_WITH_EXTERNAL_LIB} PTHREAD_LIB = PETSC_SCALAR = real PETSC_FC_INCLUDES = -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/include -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-3.6.3_debug/include -I/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu CPP_FLAGS = PETSC_KSP_LIB_BASIC = -lpetsc FPP_FLAGS = HYPRE_INCLUDE = -I/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include FC_LINKER = mpifrt HYPRE_LIB = -Wl,-rpath,/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -L/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -lHYPRE -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ PETSC_KSP_LIB = ${PETSC_WITH_EXTERNAL_LIB} CXX_FLAGS = -Xg -O0 -Kopenmp PETSC_LIB_BASIC = -lpetsc PCC_LINKER_FLAGS = -Xg -O0 -Kopenmp SSL_INCLUDE = PETSC_CONTRIB = ${PETSC_WITH_EXTERNAL_LIB} PETSC_CC_INCLUDES = -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/include -I/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-3.6.3_debug/include -I/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu PCC_LINKER = mpifcc PETSC_SYS_LIB = ${PETSC_WITH_EXTERNAL_LIB} PCC_FLAGS = -Xg -O0 -Kopenmp PTHREAD_INCLUDE = PETSC_TS_LIB = ${PETSC_WITH_EXTERNAL_LIB} PETSC_TAO_LIB_BASIC = -lpetsc BLASLAPACK_INCLUDE = PETSC_TS_LIB_BASIC = -lpetsc PETSC_VEC_LIB = ${PETSC_WITH_EXTERNAL_LIB} CC_LINKER_SUFFIX = SL_LINKER_SUFFIX = PETSC_DM_LIB = ${PETSC_WITH_EXTERNAL_LIB} DESTDIR = /home/hp150306/t00196/lib/petsc-3.6.3_debug FC_MODULE_FLAG = -I SCALAPACK_LIB = -SCALAPACK PETSC_WITH_EXTERNAL_LIB = -L/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/petsc-3.6.3_debug/lib -lpetsc -Wl,-rpath,/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -L/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -lHYPRE -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -SCALAPACK -SSL2 -lssl -lcrypto -ltrtmetcpp -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ -ltrtmet -ltrtmet_c -ldl -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -lmpi -ltofucom -ltofutop -lnsl -lutil -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -ltrtfdb -lfjrtcl -ltrtth -lmpg -lmpgpthread -lpapi -lrt -lelf -lgcc_s -L/opt/FJSVxosmmm/lib64 -ldl PETSC_TAO_LIB = ${PETSC_WITH_EXTERNAL_LIB} MPI_INCLUDE = -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu FC_SUFFIX = o PETSC_SNES_LIB = ${PETSC_WITH_EXTERNAL_LIB} SHELL = /bin/sh GREP = /bin/grep MV = /bin/mv PYTHON = /usr/bin/python MKDIR = /bin/mkdir -p SEDINPLACE = /bin/sed -i SED = /bin/sed DIFF = /usr/bin/diff -w GZIP = /bin/gzip RM = /bin/rm -f CP = /bin/cp CC_LINKER_SLFLAG = -Wl,-rpath, CC = mpifcc RANLIB = /usr/bin/ranlib DYNAMICLINKER = mpifcc CXX = mpiFCC FC = mpifrt CXXCPP = mpiFCC -E FC_LINKER_SLFLAG = -Wl,-rpath, CPP = mpifcc -E AR_LIB_SUFFIX = a LD_SHARED = /usr/bin/ar AR = /usr/bin/ar DIR = /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 PETSC_INDEX_SIZE = 32 OMAKE = /usr/bin/gmake --no-print-directory MAKE_IS_GNUMAKE = 1 MAKE = /usr/bin/gmake MAKE_NP = 7 OMAKE_PRINTDIR = /usr/bin/gmake --print-directory MPIEXEC = mpiexec PETSC_SCALAR_SIZE = 64 BUILDSHAREDLIB = no DSYMUTIL = true TEST_RUNS = C Fortran SSL OPENMP Cxx F90 F90_NoComplex F2003 Fortran_NoComplex C_NoComplex **** petsc-3.6.3_debug/lib/petsc/conf/petscrules **** shared_install: - at echo "Now to install the libraries do:" - at echo "make PETSC_DIR=${PETSC_DIR} PETSC_ARCH=${PETSC_ARCH} install" - at echo "=========================================" remoteclean: remote: libc: ${LIBNAME}(${OBJSC}) libcxx: ${LIBNAME}(${OBJSCXX}) libcu: ${LIBNAME}(${OBJSCU}) libf: ${OBJSF} -${AR} ${AR_FLAGS} ${LIBNAME} ${OBJSF} .F.a: ${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FC_FLAGS} ${FFLAGS} ${FCPPFLAGS} $< -${AR} ${AR_FLAGS} ${LIBNAME} $*.o -${RM} $*.o .f.o .f90.o .f95.o: ${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FC_FLAGS} ${FFLAGS} -o $@ $< .f.a: ${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FC_FLAGS} ${FFLAGS} $< -${AR} ${AR_FLAGS} ${LIBNAME} $*.o -${RM} $*.o .F.o .F90.o .F95.o: ${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FC_FLAGS} ${FFLAGS} ${FCPPFLAGS} -o $@ $< shared_arch: petsc4py-build: petsc4py-install: mpi4py-build: mpi4py-install: **** petsc-3.6.3_debug/include/petscconf.h **** #if !defined(INCLUDED_UNKNOWN) #define INCLUDED_UNKNOWN #ifndef IS_COLORING_MAX #define IS_COLORING_MAX 65535 #endif #ifndef STDC_HEADERS #define STDC_HEADERS 1 #endif #ifndef MPIU_COLORING_VALUE #define MPIU_COLORING_VALUE MPI_UNSIGNED_SHORT #endif #ifndef PETSC_UINTPTR_T #define PETSC_UINTPTR_T uintptr_t #endif #ifndef PETSC_HAVE_PTHREAD #define PETSC_HAVE_PTHREAD 1 #endif #ifndef PETSC_HAVE_OPENMP #define PETSC_HAVE_OPENMP 1 #endif #ifndef PETSC_DEPRECATED #define PETSC_DEPRECATED(why) __attribute((deprecated)) #endif #ifndef PETSC_REPLACE_DIR_SEPARATOR #define PETSC_REPLACE_DIR_SEPARATOR '\\' #endif #ifndef PETSC_HAVE_SO_REUSEADDR #define PETSC_HAVE_SO_REUSEADDR 1 #endif #ifndef PETSC_HAVE_MPI #define PETSC_HAVE_MPI 1 #endif #ifndef PETSC_PREFETCH_HINT_T2 #define PETSC_PREFETCH_HINT_T2 1 #endif #ifndef PETSC_PREFETCH_HINT_T0 #define PETSC_PREFETCH_HINT_T0 3 #endif #ifndef PETSC_PREFETCH_HINT_T1 #define PETSC_PREFETCH_HINT_T1 2 #endif #ifndef PETSC_USE_SOCKET_VIEWER #define PETSC_USE_SOCKET_VIEWER 1 #endif #ifndef PETSC_DIR #define PETSC_DIR "/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3" #endif #ifndef PETSC_HAVE_SSL #define PETSC_HAVE_SSL 1 #endif #ifndef PETSC_HAVE_HYPRE #define PETSC_HAVE_HYPRE 1 #endif #ifndef PETSC_LIB_DIR #define PETSC_LIB_DIR "/home/hp150306/t00196/lib/petsc-3.6.3_debug/lib" #endif #ifndef PETSC_HAVE_FORTRAN #define PETSC_HAVE_FORTRAN 1 #endif #ifndef PETSC_USE_ISATTY #define PETSC_USE_ISATTY 1 #endif #ifndef PETSC_SLSUFFIX #define PETSC_SLSUFFIX "" #endif #ifndef PETSC_FUNCTION_NAME_CXX #define PETSC_FUNCTION_NAME_CXX __func__ #endif #ifndef PETSC_HAVE_FLUSH #define PETSC_HAVE_FLUSH 1 #endif #ifndef PETSC_HAVE_ATOLL #define PETSC_HAVE_ATOLL 1 #endif #ifndef PETSC_HAVE_DOUBLE_ALIGN_MALLOC #define PETSC_HAVE_DOUBLE_ALIGN_MALLOC 1 #endif #ifndef PETSC_UNUSED #define PETSC_UNUSED __attribute((unused)) #endif #ifndef PETSC_FUNCTION_NAME_C #define PETSC_FUNCTION_NAME_C __func__ #endif #ifndef PETSC_USE_SINGLE_LIBRARY #define PETSC_USE_SINGLE_LIBRARY 1 #endif #ifndef PETSC_HAVE_BUILTIN_EXPECT #define PETSC_HAVE_BUILTIN_EXPECT 1 #endif #ifndef PETSC_DIR_SEPARATOR #define PETSC_DIR_SEPARATOR '/' #endif #ifndef PETSC_PATH_SEPARATOR #define PETSC_PATH_SEPARATOR ':' #endif #ifndef PETSC_PREFETCH_HINT_NTA #define PETSC_PREFETCH_HINT_NTA 0 #endif #ifndef PETSC_Prefetch #define PETSC_Prefetch(a,b,c) __builtin_prefetch((a),(b),(c)) #endif #ifndef PETSC_HAVE_BLASLAPACK #define PETSC_HAVE_BLASLAPACK 1 #endif #ifndef PETSC_HAVE_GZIP #define PETSC_HAVE_GZIP 1 #endif #ifndef PETSC_HAVE_STRING_H #define PETSC_HAVE_STRING_H 1 #endif #ifndef PETSC_HAVE_SYS_TYPES_H #define PETSC_HAVE_SYS_TYPES_H 1 #endif #ifndef PETSC_HAVE_ENDIAN_H #define PETSC_HAVE_ENDIAN_H 1 #endif #ifndef PETSC_HAVE_SYS_PROCFS_H #define PETSC_HAVE_SYS_PROCFS_H 1 #endif #ifndef PETSC_HAVE_DLFCN_H #define PETSC_HAVE_DLFCN_H 1 #endif #ifndef PETSC_HAVE_SCHED_H #define PETSC_HAVE_SCHED_H 1 #endif #ifndef PETSC_HAVE_STDINT_H #define PETSC_HAVE_STDINT_H 1 #endif #ifndef PETSC_HAVE_LINUX_KERNEL_H #define PETSC_HAVE_LINUX_KERNEL_H 1 #endif #ifndef PETSC_HAVE_TIME_H #define PETSC_HAVE_TIME_H 1 #endif #ifndef PETSC_HAVE_MATH_H #define PETSC_HAVE_MATH_H 1 #endif #ifndef PETSC_TIME_WITH_SYS_TIME #define PETSC_TIME_WITH_SYS_TIME 1 #endif #ifndef PETSC_HAVE_SYS_PARAM_H #define PETSC_HAVE_SYS_PARAM_H 1 #endif #ifndef PETSC_HAVE_PTHREAD_H #define PETSC_HAVE_PTHREAD_H 1 #endif #ifndef PETSC_HAVE_UNISTD_H #define PETSC_HAVE_UNISTD_H 1 #endif #ifndef PETSC_HAVE_STDLIB_H #define PETSC_HAVE_STDLIB_H 1 #endif #ifndef PETSC_HAVE_SYS_WAIT_H #define PETSC_HAVE_SYS_WAIT_H 1 #endif #ifndef PETSC_HAVE_SETJMP_H #define PETSC_HAVE_SETJMP_H 1 #endif #ifndef PETSC_HAVE_LIMITS_H #define PETSC_HAVE_LIMITS_H 1 #endif #ifndef PETSC_HAVE_SYS_UTSNAME_H #define PETSC_HAVE_SYS_UTSNAME_H 1 #endif #ifndef PETSC_HAVE_NETINET_IN_H #define PETSC_HAVE_NETINET_IN_H 1 #endif #ifndef PETSC_HAVE_SYS_SOCKET_H #define PETSC_HAVE_SYS_SOCKET_H 1 #endif #ifndef PETSC_HAVE_FLOAT_H #define PETSC_HAVE_FLOAT_H 1 #endif #ifndef PETSC_HAVE_SEARCH_H #define PETSC_HAVE_SEARCH_H 1 #endif #ifndef PETSC_HAVE_SYS_RESOURCE_H #define PETSC_HAVE_SYS_RESOURCE_H 1 #endif #ifndef PETSC_HAVE_SYS_TIMES_H #define PETSC_HAVE_SYS_TIMES_H 1 #endif #ifndef PETSC_HAVE_NETDB_H #define PETSC_HAVE_NETDB_H 1 #endif #ifndef PETSC_HAVE_MALLOC_H #define PETSC_HAVE_MALLOC_H 1 #endif #ifndef PETSC_HAVE_PWD_H #define PETSC_HAVE_PWD_H 1 #endif #ifndef PETSC_HAVE_FCNTL_H #define PETSC_HAVE_FCNTL_H 1 #endif #ifndef PETSC_HAVE_STRINGS_H #define PETSC_HAVE_STRINGS_H 1 #endif #ifndef PETSC_HAVE_SYS_SYSINFO_H #define PETSC_HAVE_SYS_SYSINFO_H 1 #endif #ifndef PETSC_HAVE_SYS_TIME_H #define PETSC_HAVE_SYS_TIME_H 1 #endif #ifndef PETSC_USING_F90 #define PETSC_USING_F90 1 #endif #ifndef PETSC_USING_F2003 #define PETSC_USING_F2003 1 #endif #ifndef PETSC_HAVE_RTLD_NOW #define PETSC_HAVE_RTLD_NOW 1 #endif #ifndef PETSC_HAVE_RTLD_LOCAL #define PETSC_HAVE_RTLD_LOCAL 1 #endif #ifndef PETSC_HAVE_RTLD_LAZY #define PETSC_HAVE_RTLD_LAZY 1 #endif #ifndef PETSC_C_STATIC_INLINE #define PETSC_C_STATIC_INLINE static inline #endif #ifndef PETSC_HAVE_FORTRAN_UNDERSCORE #define PETSC_HAVE_FORTRAN_UNDERSCORE 1 #endif #ifndef PETSC_HAVE_CXX_NAMESPACE #define PETSC_HAVE_CXX_NAMESPACE 1 #endif #ifndef PETSC_HAVE_RTLD_GLOBAL #define PETSC_HAVE_RTLD_GLOBAL 1 #endif #ifndef PETSC_C_RESTRICT #define PETSC_C_RESTRICT __restrict__ #endif #ifndef PETSC_CXX_RESTRICT #define PETSC_CXX_RESTRICT __restrict__ #endif #ifndef PETSC_CXX_STATIC_INLINE #define PETSC_CXX_STATIC_INLINE static inline #endif #ifndef PETSC_HAVE_F90_2PTR_ARG #define PETSC_HAVE_F90_2PTR_ARG 1 #endif #ifndef PETSC_HAVE_LIBZ #define PETSC_HAVE_LIBZ 1 #endif #ifndef PETSC_HAVE_LIBDL #define PETSC_HAVE_LIBDL 1 #endif #ifndef PETSC_HAVE_LIBSTDC__ #define PETSC_HAVE_LIBSTDC__ 1 #endif #ifndef PETSC_HAVE_LIBPTHREAD #define PETSC_HAVE_LIBPTHREAD 1 #endif #ifndef PETSC_HAVE_LIBCRYPTO #define PETSC_HAVE_LIBCRYPTO 1 #endif #ifndef PETSC_HAVE_FENV_H #define PETSC_HAVE_FENV_H 1 #endif #ifndef PETSC_HAVE_LIBHYPRE #define PETSC_HAVE_LIBHYPRE 1 #endif #ifndef PETSC_HAVE_LOG2 #define PETSC_HAVE_LOG2 1 #endif #ifndef PETSC_HAVE_LIBSTD_MT #define PETSC_HAVE_LIBSTD_MT 1 #endif #ifndef PETSC_HAVE_LIBMPI_CXX #define PETSC_HAVE_LIBMPI_CXX 1 #endif #ifndef PETSC_HAVE_ERF #define PETSC_HAVE_ERF 1 #endif #ifndef PETSC_HAVE_LIBSSL #define PETSC_HAVE_LIBSSL 1 #endif #ifndef PETSC_HAVE_LIBTRTMETCPP #define PETSC_HAVE_LIBTRTMETCPP 1 #endif #ifndef PETSC_HAVE_TGAMMA #define PETSC_HAVE_TGAMMA 1 #endif #ifndef PETSC_HAVE_LIBFJDEMGL #define PETSC_HAVE_LIBFJDEMGL 1 #endif #ifndef PETSC_ARCH #define PETSC_ARCH "petsc-3.6.3_debug" #endif #ifndef PETSC_CLANGUAGE_C #define PETSC_CLANGUAGE_C 1 #endif #ifndef PETSC_USE_ERRORCHECKING #define PETSC_USE_ERRORCHECKING 1 #endif #ifndef PETSC_WORDS_BIGENDIAN #define PETSC_WORDS_BIGENDIAN 1 #endif #ifndef PETSC_BITS_PER_BYTE #define PETSC_BITS_PER_BYTE 8 #endif #ifndef PETSC_SIZEOF_MPI_FINT #define PETSC_SIZEOF_MPI_FINT 4 #endif #ifndef PETSC_SIZEOF_VOID_P #define PETSC_SIZEOF_VOID_P 8 #endif #ifndef PETSC_RETSIGTYPE #define PETSC_RETSIGTYPE void #endif #ifndef PETSC_HAVE_CXX_COMPLEX #define PETSC_HAVE_CXX_COMPLEX 1 #endif #ifndef PETSC_SIZEOF_LONG #define PETSC_SIZEOF_LONG 8 #endif #ifndef PETSC_USE_FORTRANKIND #define PETSC_USE_FORTRANKIND 1 #endif #ifndef PETSC_SIZEOF_SIZE_T #define PETSC_SIZEOF_SIZE_T 8 #endif #ifndef PETSC_HAVE_SIGINFO_T #define PETSC_HAVE_SIGINFO_T 1 #endif #ifndef PETSC_SIZEOF_CHAR #define PETSC_SIZEOF_CHAR 1 #endif #ifndef PETSC_SIZEOF_DOUBLE #define PETSC_SIZEOF_DOUBLE 8 #endif #ifndef PETSC_SIZEOF_FLOAT #define PETSC_SIZEOF_FLOAT 4 #endif #ifndef PETSC_HAVE_C99_COMPLEX #define PETSC_HAVE_C99_COMPLEX 1 #endif #ifndef PETSC_SIZEOF_INT #define PETSC_SIZEOF_INT 4 #endif #ifndef PETSC_SIZEOF_LONG_LONG #define PETSC_SIZEOF_LONG_LONG 8 #endif #ifndef PETSC_SIZEOF_MPI_COMM #define PETSC_SIZEOF_MPI_COMM 8 #endif #ifndef PETSC_SIZEOF_SHORT #define PETSC_SIZEOF_SHORT 2 #endif #ifndef PETSC_HAVE_STRCASECMP #define PETSC_HAVE_STRCASECMP 1 #endif #ifndef PETSC_HAVE_GET_NPROCS #define PETSC_HAVE_GET_NPROCS 1 #endif #ifndef PETSC_HAVE_POPEN #define PETSC_HAVE_POPEN 1 #endif #ifndef PETSC_HAVE_SIGSET #define PETSC_HAVE_SIGSET 1 #endif #ifndef PETSC_HAVE_GETWD #define PETSC_HAVE_GETWD 1 #endif #ifndef PETSC_HAVE_VSNPRINTF #define PETSC_HAVE_VSNPRINTF 1 #endif #ifndef PETSC_HAVE_TIMES #define PETSC_HAVE_TIMES 1 #endif #ifndef PETSC_HAVE_DLSYM #define PETSC_HAVE_DLSYM 1 #endif #ifndef PETSC_HAVE_SNPRINTF #define PETSC_HAVE_SNPRINTF 1 #endif #ifndef PETSC_HAVE_GETHOSTBYNAME #define PETSC_HAVE_GETHOSTBYNAME 1 #endif #ifndef PETSC_HAVE_GETCWD #define PETSC_HAVE_GETCWD 1 #endif #ifndef PETSC_HAVE_DLERROR #define PETSC_HAVE_DLERROR 1 #endif #ifndef PETSC_HAVE_FORK #define PETSC_HAVE_FORK 1 #endif #ifndef PETSC_HAVE_RAND #define PETSC_HAVE_RAND 1 #endif #ifndef PETSC_HAVE_GETTIMEOFDAY #define PETSC_HAVE_GETTIMEOFDAY 1 #endif #ifndef PETSC_HAVE_DLCLOSE #define PETSC_HAVE_DLCLOSE 1 #endif #ifndef PETSC_HAVE_UNAME #define PETSC_HAVE_UNAME 1 #endif #ifndef PETSC_HAVE_GETHOSTNAME #define PETSC_HAVE_GETHOSTNAME 1 #endif #ifndef PETSC_HAVE_MKSTEMP #define PETSC_HAVE_MKSTEMP 1 #endif #ifndef PETSC_HAVE_SIGACTION #define PETSC_HAVE_SIGACTION 1 #endif #ifndef PETSC_HAVE_DRAND48 #define PETSC_HAVE_DRAND48 1 #endif #ifndef PETSC_HAVE_MEMALIGN #define PETSC_HAVE_MEMALIGN 1 #endif #ifndef PETSC_HAVE_VA_COPY #define PETSC_HAVE_VA_COPY 1 #endif #ifndef PETSC_HAVE_CLOCK #define PETSC_HAVE_CLOCK 1 #endif #ifndef PETSC_HAVE_ACCESS #define PETSC_HAVE_ACCESS 1 #endif #ifndef PETSC_HAVE_SIGNAL #define PETSC_HAVE_SIGNAL 1 #endif #ifndef PETSC_HAVE_USLEEP #define PETSC_HAVE_USLEEP 1 #endif #ifndef PETSC_HAVE_GETRUSAGE #define PETSC_HAVE_GETRUSAGE 1 #endif #ifndef PETSC_HAVE_VFPRINTF #define PETSC_HAVE_VFPRINTF 1 #endif #ifndef PETSC_HAVE_NANOSLEEP #define PETSC_HAVE_NANOSLEEP 1 #endif #ifndef PETSC_HAVE_GETDOMAINNAME #define PETSC_HAVE_GETDOMAINNAME 1 #endif #ifndef PETSC_HAVE_TIME #define PETSC_HAVE_TIME 1 #endif #ifndef PETSC_HAVE_LSEEK #define PETSC_HAVE_LSEEK 1 #endif #ifndef PETSC_HAVE_SOCKET #define PETSC_HAVE_SOCKET 1 #endif #ifndef PETSC_HAVE_SYSINFO #define PETSC_HAVE_SYSINFO 1 #endif #ifndef PETSC_HAVE_READLINK #define PETSC_HAVE_READLINK 1 #endif #ifndef PETSC_HAVE_REALPATH #define PETSC_HAVE_REALPATH 1 #endif #ifndef PETSC_HAVE_DLOPEN #define PETSC_HAVE_DLOPEN 1 #endif #ifndef PETSC_HAVE_MEMMOVE #define PETSC_HAVE_MEMMOVE 1 #endif #ifndef PETSC_SIGNAL_CAST #define PETSC_SIGNAL_CAST #endif #ifndef PETSC_HAVE_SLEEP #define PETSC_HAVE_SLEEP 1 #endif #ifndef PETSC_HAVE_VPRINTF #define PETSC_HAVE_VPRINTF 1 #endif #ifndef PETSC_HAVE_BZERO #define PETSC_HAVE_BZERO 1 #endif #ifndef PETSC_HAVE_GETPAGESIZE #define PETSC_HAVE_GETPAGESIZE 1 #endif #ifndef PETSC_CPU_RELAX #define PETSC_CPU_RELAX() __asm__ __volatile__ ("":::"memory") #endif #ifndef PETSC_BLASLAPACK_UNDERSCORE #define PETSC_BLASLAPACK_UNDERSCORE 1 #endif #ifndef PETSC_HAVE_MPI_F90MODULE #define PETSC_HAVE_MPI_F90MODULE 1 #endif #ifndef PETSC_HAVE_MPI_IALLREDUCE #define PETSC_HAVE_MPI_IALLREDUCE 1 #endif #ifndef PETSC_HAVE_OMPI_MINOR_VERSION #define PETSC_HAVE_OMPI_MINOR_VERSION 6 #endif #ifndef PETSC_HAVE_MPI_IN_PLACE #define PETSC_HAVE_MPI_IN_PLACE 1 #endif #ifndef PETSC_HAVE_MPI_COMM_C2F #define PETSC_HAVE_MPI_COMM_C2F 1 #endif #ifndef PETSC_HAVE_MPI_COMBINER_CONTIGUOUS #define PETSC_HAVE_MPI_COMBINER_CONTIGUOUS 1 #endif #ifndef PETSC_HAVE_MPI_TYPE_GET_EXTENT #define PETSC_HAVE_MPI_TYPE_GET_EXTENT 1 #endif #ifndef PETSC_HAVE_MPI_WIN_CREATE #define PETSC_HAVE_MPI_WIN_CREATE 1 #endif #ifndef PETSC_HAVE_MPI_TYPE_DUP #define PETSC_HAVE_MPI_TYPE_DUP 1 #endif #ifndef PETSC_HAVE_MPI_INIT_THREAD #define PETSC_HAVE_MPI_INIT_THREAD 1 #endif #ifndef PETSC_HAVE_MPI_COMM_F2C #define PETSC_HAVE_MPI_COMM_F2C 1 #endif #ifndef PETSC_HAVE_MPI_TYPE_GET_ENVELOPE #define PETSC_HAVE_MPI_TYPE_GET_ENVELOPE 1 #endif #ifndef PETSC_HAVE_MPI_ALLTOALLW #define PETSC_HAVE_MPI_ALLTOALLW 1 #endif #ifndef PETSC_HAVE_OMPI_MAJOR_VERSION #define PETSC_HAVE_OMPI_MAJOR_VERSION 1 #endif #ifndef PETSC_HAVE_MPIIO #define PETSC_HAVE_MPIIO 1 #endif #ifndef PETSC_HAVE_MPI_COMM_SPAWN #define PETSC_HAVE_MPI_COMM_SPAWN 1 #endif #ifndef PETSC_HAVE_MPI_FINT #define PETSC_HAVE_MPI_FINT 1 #endif #ifndef PETSC_HAVE_MPI_IBARRIER #define PETSC_HAVE_MPI_IBARRIER 1 #endif #ifndef PETSC_HAVE_MPI_FINALIZED #define PETSC_HAVE_MPI_FINALIZED 1 #endif #ifndef PETSC_HAVE_OMPI_RELEASE_VERSION #define PETSC_HAVE_OMPI_RELEASE_VERSION 3 #endif #ifndef PETSC_HAVE_MPI_REPLACE #define PETSC_HAVE_MPI_REPLACE 1 #endif #ifndef PETSC_HAVE_MPI_EXSCAN #define PETSC_HAVE_MPI_EXSCAN 1 #endif #ifndef PETSC_HAVE_MPI_COMBINER_DUP #define PETSC_HAVE_MPI_COMBINER_DUP 1 #endif #ifndef PETSC_USE_INFO #define PETSC_USE_INFO 1 #endif #ifndef PETSC_Alignx #define PETSC_Alignx(a,b) #endif #ifndef PETSC_USE_BACKWARD_LOOP #define PETSC_USE_BACKWARD_LOOP 1 #endif #ifndef PETSC_USE_DEBUG #define PETSC_USE_DEBUG 1 #endif #ifndef PETSC_IS_COLOR_VALUE_TYPE_SIZE #define PETSC_IS_COLOR_VALUE_TYPE_SIZE PETSC_SIZEOF_SHORT #endif #ifndef PETSC_USE_LOG #define PETSC_USE_LOG 1 #endif #ifndef PETSC_IS_COLOR_VALUE_TYPE #define PETSC_IS_COLOR_VALUE_TYPE short #endif #ifndef PETSC_USE_CTABLE #define PETSC_USE_CTABLE 1 #endif #ifndef PETSC_MEMALIGN #define PETSC_MEMALIGN 16 #endif #ifndef PETSC_USE_FORTRAN_INTERFACES #define PETSC_USE_FORTRAN_INTERFACES 1 #endif #ifndef PETSC_USE_SCALAR_REAL #define PETSC_USE_SCALAR_REAL 1 #endif #ifndef PETSC_HAVE_ISINF #define PETSC_HAVE_ISINF 1 #endif #ifndef PETSC_HAVE_ISNAN #define PETSC_HAVE_ISNAN 1 #endif #ifndef PETSC_USE_REAL_DOUBLE #define PETSC_USE_REAL_DOUBLE 1 #endif #ifndef PETSC_HAVE_DYNAMIC_LIBRARIES #define PETSC_HAVE_DYNAMIC_LIBRARIES 1 #endif #ifndef PETSC_HAVE_SHARED_LIBRARIES #define PETSC_HAVE_SHARED_LIBRARIES 1 #endif #ifndef PETSC__GNU_SOURCE #define PETSC__GNU_SOURCE 1 #endif #ifndef PETSC__BSD_SOURCE #define PETSC__BSD_SOURCE 1 #endif #ifndef PETSC__DEFAULT_SOURCE #define PETSC__DEFAULT_SOURCE 1 #endif #ifndef PETSC_LEVEL1_DCACHE_LINESIZE #define PETSC_LEVEL1_DCACHE_LINESIZE 32 #endif #ifndef PETSC_LEVEL1_DCACHE_SIZE #define PETSC_LEVEL1_DCACHE_SIZE 32768 #endif #ifndef PETSC_HAVE_FORTRAN_GET_COMMAND_ARGUMENT #define PETSC_HAVE_FORTRAN_GET_COMMAND_ARGUMENT 1 #endif #ifndef PETSC_USE_PROC_FOR_SIZE #define PETSC_USE_PROC_FOR_SIZE 1 #endif #ifndef PETSC_HAVE_SCHED_CPU_SET_T #define PETSC_HAVE_SCHED_CPU_SET_T 1 #endif #ifndef PETSC_HAVE_PTHREAD_BARRIER_T #define PETSC_HAVE_PTHREAD_BARRIER_T 1 #endif #ifndef PETSC_HAVE_SYS_SYSCTL_H #define PETSC_HAVE_SYS_SYSCTL_H 1 #endif #endif **** petsc-3.6.3_debug/include/petscfix.h **** #if !defined(INCLUDED_UNKNOWN) #define INCLUDED_UNKNOWN #if defined(__cplusplus) extern "C" { } #else #endif #endif Configure Actions These are the actions performed by configure on the filesystem ----------------------------------------------------------------- PETSc: Build : Set default architecture to petsc-3.6.3_debug in lib/petsc/conf/petscvariables File creation : Created petsc-3.6.3_debug/lib/petsc/conf/reconfigure-petsc-3.6.3_debug.py for automatic reconfiguration Framework: File creation : Created makefile configure header petsc-3.6.3_debug/lib/petsc/conf/petscvariables File creation : Created makefile configure header petsc-3.6.3_debug/lib/petsc/conf/petscrules File creation : Created configure header petsc-3.6.3_debug/include/petscconf.h File creation : Created C specific configure header petsc-3.6.3_debug/include/petscfix.h Pushing language C Popping language C Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Compilers: C Compiler: mpifcc -Xg -O0 -Kopenmp C++ Compiler: mpiFCC -Xg -O0 -Kopenmp Fortran Compiler: mpifrt -X9 -O0 -Kopenmp Linkers: Static linker: /usr/bin/ar cr Dynamic linker: mpifcc -shared -Xg -O0 -Kopenmp make: BLAS/LAPACK: -SSL2 MPI: Includes: -I/opt/FJSVtclang/GM-1.2.0-20/include/mpi/fujitsu pthread: hypre: Includes: -I/home/hp150306/t00196/lib/hypre-2.10.0b-p4/include Library: -Wl,-rpath,/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -L/home/hp150306/t00196/lib/hypre-2.10.0b-p4/lib -lHYPRE -ltrtmetcpp -L/opt/FJSVpxtof/sparc64fx/lib64 -L/opt/FJSVtclang/GM-1.2.0-20/lib64 -L//opt/FJSVtclang/GM-1.2.0-20/lib64 -L/opt/FJSVxosmmm/lib64 -lmpi_cxx -lfjdemgl -lstd_mt -lpthread -lstdc++ openmp: scalapack: Library: -SCALAPACK Arch: ssl: Library: -lssl -lcrypto PETSc: PETSC_ARCH: petsc-3.6.3_debug PETSC_DIR: /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 Clanguage: C Integer size: 32 Memory alignment: 16 Scalar type: real Precision: double shared libraries: disabled xxx=========================================================================xxx Configure stage complete. Now build PETSc libraries with (gnumake build): make PETSC_DIR=/.global/volume2/home/hp150306/t00196/source/petsc-3.6.3 PETSC_ARCH=petsc-3.6.3_debug all xxx=========================================================================xxx ================================================================================ Finishing Configure Run at Thu May 26 15:55:43 2016 ================================================================================ From Michael.Becker at physik.uni-giessen.de Fri Jun 3 05:37:38 2016 From: Michael.Becker at physik.uni-giessen.de (Michael Becker) Date: Fri, 3 Jun 2016 12:37:38 +0200 Subject: [petsc-users] Tuning performance for simple solver Message-ID: <57515DF2.3090405@physik.uni-giessen.de> Dear all, I have a few questions regarding possible performance enhancements for the PETSc solver I included in my project. It's a particle-in-cell plasma simulation written in C++, where Poisson's equation needs to be solved repeatedly on every timestep. The simulation domain is discretized using finite differences, so the solver therefore needs to be able to efficiently solve the linear system A x = b successively with changing b. The solution x of the previous timestep is generally a good initial guess for the solution. I wrote a class PETScSolver that holds all PETSc objects and necessary information about domain size and decomposition. To solve the linear system, two arrays, 'phi' and 'charge', are passed to a member function solve(), where they are copied to PETSc vectors, and KSPSolve() is called. After convergence, the solution is then transferred again to the phi array so that other program parts can use it. The matrix is created using DMDA. An array 'bound' is used to determine whether a node is either a Dirichlet BC or holds a charge. I attached three files, petscsolver.h, petscsolver.cpp and main.cpp, that contain a shortened version of the solver class and a set-up to initialize and run a simple problem. Is there anything I can change to generally make the program run faster? And, since I'm rather unexperienced with KSP methods, how do I efficiently choose PC and KSP? Just by testing every combination? Would multigrid be a viable option as a pure solver (-ksp_type preonly)? Thanks, Michael -------------- next part -------------- A non-text attachment was scrubbed... Name: main.cpp Type: text/x-c++src Size: 5029 bytes Desc: not available URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: petscsolver.h Type: text/x-chdr Size: 615 bytes Desc: not available URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: petscsolver.cpp Type: text/x-c++src Size: 4104 bytes Desc: not available URL: From dave.mayhem23 at gmail.com Fri Jun 3 05:56:44 2016 From: dave.mayhem23 at gmail.com (Dave May) Date: Fri, 3 Jun 2016 11:56:44 +0100 Subject: [petsc-users] Tuning performance for simple solver In-Reply-To: <57515DF2.3090405@physik.uni-giessen.de> References: <57515DF2.3090405@physik.uni-giessen.de> Message-ID: On 3 June 2016 at 11:37, Michael Becker < Michael.Becker at physik.uni-giessen.de> wrote: > Dear all, > > I have a few questions regarding possible performance enhancements for the > PETSc solver I included in my project. > > It's a particle-in-cell plasma simulation written in C++, where Poisson's > equation needs to be solved repeatedly on every timestep. > The simulation domain is discretized using finite differences, so the > solver therefore needs to be able to efficiently solve the linear system A > x = b successively with changing b. The solution x of the previous timestep > is generally a good initial guess for the solution. > > I wrote a class PETScSolver that holds all PETSc objects and necessary > information about domain size and decomposition. To solve the linear > system, two arrays, 'phi' and 'charge', are passed to a member function > solve(), where they are copied to PETSc vectors, and KSPSolve() is called. > After convergence, the solution is then transferred again to the phi array > so that other program parts can use it. > > The matrix is created using DMDA. An array 'bound' is used to determine > whether a node is either a Dirichlet BC or holds a charge. > > I attached three files, petscsolver.h, petscsolver.cpp and main.cpp, that > contain a shortened version of the solver class and a set-up to initialize > and run a simple problem. > > Is there anything I can change to generally make the program run faster? > Before changing anything, you should profile your code to see where time is being spent. To that end, you should compile an optimized build of petsc, link it to you application and run your code with the option -log_summary. The -log_summary flag will generate a performance profile of specific functionality within petsc (KSPSolve, MatMult etc) so you can see where all the time is being spent. As a second round of profiling, you should consider registering specific functionality in your code you think is performance critical. You can do this using the function PetscLogStageRegister() http://www.mcs.anl.gov/petsc/petsc-current/docs/manualpages/Profiling/PetscLogStageRegister.html Check out the examples listed at the bottom of this web page to see how to log stages. Once you've registered stages, these will appear in the report provided by -log_summary Thanks, Dave And, since I'm rather unexperienced with KSP methods, how do I efficiently > choose PC and KSP? Just by testing every combination? > Would multigrid be a viable option as a pure solver (-ksp_type preonly)? > > Thanks, > Michael > -------------- next part -------------- An HTML attachment was scrubbed... URL: From knepley at gmail.com Fri Jun 3 07:32:22 2016 From: knepley at gmail.com (Matthew Knepley) Date: Fri, 3 Jun 2016 07:32:22 -0500 Subject: [petsc-users] Tuning performance for simple solver In-Reply-To: References: <57515DF2.3090405@physik.uni-giessen.de> Message-ID: On Fri, Jun 3, 2016 at 5:56 AM, Dave May wrote: > On 3 June 2016 at 11:37, Michael Becker < > Michael.Becker at physik.uni-giessen.de> wrote: > >> Dear all, >> >> I have a few questions regarding possible performance enhancements for >> the PETSc solver I included in my project. >> >> It's a particle-in-cell plasma simulation written in C++, where Poisson's >> equation needs to be solved repeatedly on every timestep. >> The simulation domain is discretized using finite differences, so the >> solver therefore needs to be able to efficiently solve the linear system A >> x = b successively with changing b. The solution x of the previous timestep >> is generally a good initial guess for the solution. >> >> I wrote a class PETScSolver that holds all PETSc objects and necessary >> information about domain size and decomposition. To solve the linear >> system, two arrays, 'phi' and 'charge', are passed to a member function >> solve(), where they are copied to PETSc vectors, and KSPSolve() is called. >> After convergence, the solution is then transferred again to the phi array >> so that other program parts can use it. >> >> The matrix is created using DMDA. An array 'bound' is used to determine >> whether a node is either a Dirichlet BC or holds a charge. >> >> I attached three files, petscsolver.h, petscsolver.cpp and main.cpp, that >> contain a shortened version of the solver class and a set-up to initialize >> and run a simple problem. >> >> Is there anything I can change to generally make the program run faster? >> > > Before changing anything, you should profile your code to see where time > is being spent. > > To that end, you should compile an optimized build of petsc, link it to > you application and run your code with the option -log_summary. The > -log_summary flag will generate a performance profile of specific > functionality within petsc (KSPSolve, MatMult etc) so you can see where all > the time is being spent. > > As a second round of profiling, you should consider registering specific > functionality in your code you think is performance critical. > You can do this using the function PetscLogStageRegister() > > > http://www.mcs.anl.gov/petsc/petsc-current/docs/manualpages/Profiling/PetscLogStageRegister.html > > Check out the examples listed at the bottom of this web page to see how to > log stages. Once you've registered stages, these will appear in the report > provided by -log_summary > Do everything Dave said. I will also note that since you are using FD, I am guessing you are solving on a square. Then you should really be using geometric MG. We support this through the DMDA object. Thanks, Matt > Thanks, > Dave > > > And, since I'm rather unexperienced with KSP methods, how do I efficiently >> choose PC and KSP? Just by testing every combination? >> Would multigrid be a viable option as a pure solver (-ksp_type preonly)? >> >> Thanks, >> Michael >> > > -- What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead. -- Norbert Wiener -------------- next part -------------- An HTML attachment was scrubbed... URL: From balay at mcs.anl.gov Fri Jun 3 09:33:21 2016 From: balay at mcs.anl.gov (Satish Balay) Date: Fri, 3 Jun 2016 09:33:21 -0500 Subject: [petsc-users] Fwd: Re: Error with PETSc on K computer In-Reply-To: <3436e085-071a-db3f-3438-84e2536af2d5@gmail.com> References: <7423eeed-4b95-28e7-c55d-08e515911935@gmail.com> <3436e085-071a-db3f-3438-84e2536af2d5@gmail.com> Message-ID: Sorry - I'm not sure whats hapenning with this compiler. [for a build without the patch I sent ] - can you edit PETSC_ARCH/include/petscconf.h and remove the lines #ifndef PETSC_HAVE_F90_2PTR_ARG #define PETSC_HAVE_F90_2PTR_ARG 1 #endif And then build the libraries [do not run configure again]. Does this make a difference for this example? Satish On Fri, 3 Jun 2016, TAY wee-beng wrote: > Hi, > > Is there any update to the issue below? > > No hurry, just to make sure that the email is sent successfully. > > > Thanks > > > > -------- Forwarded Message -------- > Subject: Re: [petsc-users] Error with PETSc on K computer > Date: Thu, 2 Jun 2016 10:25:22 +0800 > From: TAY wee-beng > To: petsc-users > > > > Hi Satish, > > The X9 option is : > > Provides a different interpretation under Fortran 95 specifications > for any parts not conforming to the language specifications of this > compiler > > I just patched and re-compiled but it still can't work. I've attached the > configure.log for both builds. > > FYI, some parts of the PETSc 3.6.3 code were initially patch to make it work > with the K computer system: > > $ diff -u petsc-3.6.3/config/BuildSystem/config/package.py.org > petsc-3.6.3/config/BuildSystem/config/package.py > --- petsc-3.6.3/config/BuildSystem/config/package.py.org 2015-12-04 > 14:06:42.000000000 +0900 > +++ petsc-3.6.3/config/BuildSystem/config/package.py 2016-01-22 > 11:09:37.000000000 +0900 > @@ -174,7 +174,7 @@ > return '' > > def getSharedFlag(self,cflags): > - for flag in ['-PIC', '-fPIC', '-KPIC', '-qpic']: > + for flag in ['-KPIC', '-fPIC', '-PIC', '-qpic']: > if cflags.find(flag) >=0: return flag > return '' > > $ diff -u petsc-3.6.3/config/BuildSystem/config/setCompilers.py.org > petsc-3.6.3/config/BuildSystem/config/setCompilers.py > --- petsc-3.6.3/config/BuildSystem/config/setCompilers.py.org 2015-07-23 > 00:22:46.000000000 +0900 > +++ petsc-3.6.3/config/BuildSystem/config/setCompilers.py 2016-01-22 > 11:10:05.000000000 +0900 > @@ -1017,7 +1017,7 @@ > self.pushLanguage(language) > #different compilers are sensitive to the order of testing these > flags. So separete out GCC test. > if config.setCompilers.Configure.isGNU(self.getCompiler()): testFlags = > ['-fPIC'] > - else: testFlags = ['-PIC', '-fPIC', '-KPIC','-qpic'] > + else: testFlags = ['-KPIC', '-fPIC', '-PIC','-qpic'] > for testFlag in testFlags: > try: > self.logPrint('Trying '+language+' compiler flag '+testFlag) > $ diff -u petsc-3.6.3/config/BuildSystem/config/packages/openmp.py.org > petsc-3.6.3/config/BuildSystem/config/packages/openmp.py > --- petsc-3.6.3/config/BuildSystem/config/packages/openmp.py.org 2016-01-25 > 15:42:23.000000000+0900 > +++ petsc-3.6.3/config/BuildSystem/config/packages/openmp.py 2016-01-22 > 17:13:52.000000000 +0900 > @@ -19,7 +19,8 @@ > self.found = 0 > self.setCompilers.pushLanguage('C') > # > - for flag in ["-fopenmp", # Gnu > + for flag in ["-Kopenmp", # Fujitsu > + "-fopenmp", # Gnu > "-qsmp=omp",# IBM XL C/C++ > "-h omp", # Cray. Must come after XL because XL > interprets this option as meaning"-soname omp" > "-mp", # Portland Group > > $ diff -u ./petsc-3.6.3/config/BuildSystem/config/compilers.py.org > ./petsc-3.6.3/config/BuildSystem/config/compilers.py > --- ./petsc-3.6.3/config/BuildSystem/config/compilers.py.org 2015-06-10 > 06:24:49.000000000 +0900 > +++ ./petsc-3.6.3/config/BuildSystem/config/compilers.py 2016-02-19 > 11:56:12.000000000 +0900 > @@ -164,7 +164,7 @@ > def checkCLibraries(self): > '''Determines the libraries needed to link with C''' > oldFlags = self.setCompilers.LDFLAGS > - self.setCompilers.LDFLAGS += ' -v' > + self.setCompilers.LDFLAGS += ' -###' > self.pushLanguage('C') > (output, returnCode) = self.outputLink('', '') > self.setCompilers.LDFLAGS = oldFlags > @@ -413,7 +413,7 @@ > def checkCxxLibraries(self): > '''Determines the libraries needed to link with C++''' > oldFlags = self.setCompilers.LDFLAGS > - self.setCompilers.LDFLAGS += ' -v' > + self.setCompilers.LDFLAGS += ' -###' > self.pushLanguage('Cxx') > (output, returnCode) = self.outputLink('', '') > self.setCompilers.LDFLAGS = oldFlags > > > > Thank you > > Yours sincerely, > > TAY wee-beng > > On 2/6/2016 3:18 AM, Satish Balay wrote: > > What does -X9 in --FFLAGS="-X9 -O0" do? > > > > can you send configure.log for this build? > > > > And does the attached patch make a difference with this example? > > [suggest doing a separate temporary build of PETSc - in a different source > > location - to check this.] > > > > Satish > > > > On Wed, 1 Jun 2016, TAY wee-beng wrote: > > > > > Hi Satish, > > > > > > Only partially working: > > > > > > [t00196 at b04-036 tutorials]$ mpiexec -n 2 ./ex4f90 > > > jwe1050i-w The hardware barrier couldn't be used and continues processing > > > using the software barrier. > > > taken to (standard) corrective action, execution continuing. > > > jwe1050i-w The hardware barrier couldn't be used and continues processing > > > using the software barrier. > > > taken to (standard) corrective action, execution continuing. > > > Vec Object:Vec Object:initial vector:initial vector: 1 MPI processes > > > type: seq > > > 10 > > > 20 > > > 30 > > > 40 > > > 50 > > > 60 > > > 1 MPI processes > > > type: seq > > > 10 > > > 20 > > > 30 > > > 40 > > > 50 > > > 60 > > > [1]PETSC ERROR: > > > ------------------------------------------------------------------------ > > > [1]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, > > > probably > > > memory access out of range > > > [1]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger > > > [1]PETSC ERROR: or see > > > http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind > > > [1]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple Mac OS X > > > to > > > find memory corruption errors > > > [1]PETSC ERROR: likely location of problem given in stack below > > > [1]PETSC ERROR: --------------------- Stack Frames > > > ------------------------------------ > > > [1]PETSC ERROR: Note: The EXACT line numbers in the stack are not > > > available, > > > [1]PETSC ERROR: INSTEAD the line number of the start of the function > > > [1]PETSC ERROR: is given. > > > [1]PETSC ERROR: [1] F90Array1dCreate line 50 > > > /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c > > > [1]PETSC ERROR: --------------------- Error Message > > > ------------------------------------------[0]PETSC ERROR: > > > ------------------------------------------------------------------------ > > > [0]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, > > > probably > > > memory access out of range > > > [0]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger > > > [0]PETSC ERROR: or see > > > http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind > > > [0]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple Mac OS X > > > to > > > find memory corruption errors > > > [0]PETSC ERROR: likely location of problem given in stack below > > > [0]PETSC ERROR: --------------------- Stack Frames > > > ------------------------------------ > > > [0]PETSC ERROR: Note: The EXACT line numbers in the stack are not > > > available, > > > [0]PETSC ERROR: INSTEAD the line number of the start of the function > > > [0]PETSC ERROR: is given. > > > [0]PETSC ERROR: [0] F90Array1dCreate line 50 > > > /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c > > > [0]PETSC ERROR: --------------------- Error Message > > > -------------------------------------------------------------- > > > [1]PETSC ERROR: Signal received > > > [1]PETSC ERROR: Seehttp://www.mcs.anl.gov/petsc/documentation/faq.html > > > for > > > trouble shooting. > > > [1]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015 > > > [1]PETSC ERROR: ./ex4f90 on a petsc-3.6.3_debug named b04-036 by Unknown > > > Wed > > > Jun 1 13:23:41 2016 > > > [1]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC > > > --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" > > > --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" > > > --LD_SHARED= > > > --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big > > > --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 > > > --with-scalapack-lib=-SCALAPACK > > > --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug > > > --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 > > > --with-hypre=1 > > > --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4 > > > [1]PETSC ERROR: #1 User provided function() line 0 in unknown file > > > -------------------------------------------------------------------------- > > > [mpi::mpi-api::mpi-abort] > > > MPI_ABORT was invoked on rank 1 in communicator MPI_COMM_WORLD > > > with errorcode 59. > > > > > > NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes. > > > You may or may not see output from other processes, depending on > > > exactly when Open MPI kills them. > > > -------------------------------------------------------------------------- > > > [b04-036:28998] > > > /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_errmgr_base_error_abort+0x84) > > > [0xffffffff11360404] > > > [b04-036:28998] > > > /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(ompi_mpi_abort+0x51c) > > > [0xffffffff1110391c] > > > [b04-036:28998] > > > /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(MPI_Abort+0x6c) > > > [0xffffffff1111b5ec] > > > [b04-036:28998] > > > /opt/FJSVtclang/GM-1.2.0-20/lib64/libtrtmet_c.so.1(MPI_Abort+0x2c) > > > [0xffffffff00281bf0] > > > [b04-036:28998] ./ex4f90 [0x292548] > > > [b04-036:28998] ./ex4f90 [0x29165c] > > > [b04-036:28998] > > > /opt/FJSVxosmmm/lib64/libmpgpthread.so.1(_IO_funlockfile+0x5c) > > > [0xffffffff121e1974] > > > [b04-036:28998] ./ex4f90 [0x9f6748] > > > [b04-036:28998] ./ex4f90 [0x9f0ea4] > > > [b04-036:28998] ./ex4f90 [0x2c76a0] > > > [b04-036:28998] ./ex4f90(MAIN__+0x38c) [0x10688c] > > > [b04-036:28998] ./ex4f90(main+0xec) [0x268e91c] > > > [b04-036:28998] /lib64/libc.so.6(__libc_start_main+0x194) > > > [0xffffffff138cb81c] > > > [b04-036:28998] ./ex4f90 [0x1063ac] > > > [1]PETSC ERROR: > > > ------------------------------------------------------------------------ > > > [1]PETSC ERROR: Caught signal number 15 Terminate: Some process (or the > > > batch > > > system) has told this process to end > > > [1]PETSC ERROR: Tr-------------------- > > > [0]PETSC ERROR: Signal received > > > [0]PETSC ERROR: Seehttp://www.mcs.anl.gov/petsc/documentation/faq.html > > > for > > > trouble shooting. > > > [0]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015 > > > [0]PETSC ERROR: ./ex4f90 on a petsc-3.6.3_debug named b04-036 by Unknown > > > Wed > > > Jun 1 13:23:41 2016 > > > [0]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC > > > --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" > > > --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" > > > --LD_SHARED= > > > --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big > > > --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 > > > --with-scalapack-lib=-SCALAPACK > > > --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug > > > --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 > > > --with-hypre=1 > > > --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4 > > > [0]PETSC ERROR: #1 User provided function() line 0 in unknown file > > > -------------------------------------------------------------------------- > > > [mpi::mpi-api::mpi-abort] > > > MPI_ABORT was invoked on rank 0 in communicator MPI_COMM_WORLD > > > with errorcode 59. > > > > > > NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes. > > > You may or may not see output from other processes, depending on > > > exactly when Open MPI kills them. > > > -------------------------------------------------------------------------- > > > [b04-036:28997] > > > /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_errmgr_base_error_abort+0x84) > > > [0xffffffff11360404] > > > [b04-036:28997] > > > /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(ompi_mpi_abort+0x51c) > > > [0xffffffff1110391c] > > > [b04-036:28997] > > > /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(MPI_Abort+0x6c) > > > [0xffffffff1111b5ec] > > > [b04-036:28997] > > > /opt/FJSVtclang/GM-1.2.0-20/lib64/libtrtmet_c.so.1(MPI_Abort+0x2c) > > > [0xffffffff00281bf0] > > > [b04-036:28997] ./ex4f90 [0x292548] > > > [b04-036:28997] ./ex4f90 [0x29165c] > > > [b04-036:28997] > > > /opt/FJSVxosmmm/lib64/libmpgpthread.so.1(_IO_funlockfile+0x5c) > > > [0xffffffff121e1974] > > > [b04-036:28997] ./ex4f90 [0x9f6748] > > > [b04-036:28997] ./ex4f90 [0x9f0ea4] > > > [b04-036:28997] ./ex4f90 [0x2c76a0] > > > [b04-036:28997] ./ex4f90(MAIN__+0x38c) [0x10688c] > > > [b04-036:28997] ./ex4f90(main+0xec) [0x268e91c] > > > [b04-036:28997] /lib64/libc.so.6(__libc_start_main+0x194) > > > [0xffffffff138cb81c] > > > [b04-036:28997] ./ex4f90 [0x1063ac] > > > [0]PETSC ERROR: > > > ------------------------------------------------------------------------ > > > [0]PETSC ERROR: Caught signal number 15 Terminate: Some process (or the > > > batch > > > system) has told this process to end > > > [0]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger > > > [0]PETSC ERROR: or see > > > http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind > > > [0]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple Mac OS X > > > to > > > find memory corruption errors > > > [0]PETSC ERROR: likely location of problem given in stack below > > > [0]PETSC ERROR: --------------------- Stack Frames > > > ------------------------------------ > > > [0]PETSC ERROR: Note: The EXACT line numbers in the stack are not > > > available, > > > [0]PETSC ERROR: INSTEAD the line number of the start of the function > > > [0]PETSC ERROR: is given. > > > [0]PETSC ERROR: [0] F90Array1dCreate line 50 > > > /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c > > > [0]PETSC ERROR: --------------------- Error Message > > > -------------------------------------------------------------- > > > [0]PETSC ERROR: Signal received > > > [0]PETSC ERROR: Seehttp://www.mcs.anl.gov/petsc/documentation/faq.html > > > for > > > trouble shooting. > > > [0]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015 > > > [0]PETSC ERROR: ./ex4f90 on a petsc-3.6.3_debug named b04-036 by Unknown > > > Wed > > > Jun 1 13:23:41 2016 > > > [0]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC > > > --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" > > > --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" > > > --LD_SHARED= > > > --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big > > > --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 > > > --with-scalapack-lib=-SCALAPACK > > > --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug > > > --with-fortran-interfaces=1 --with-debuy option -start_in_debugger or > > > -on_error_attach_debugger > > > [1]PETSC ERROR: or see > > > http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind > > > [1]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple Mac OS X > > > to > > > find memory corruption errors > > > [1]PETSC ERROR: likely location of problem given in stack below > > > [1]PETSC ERROR: --------------------- Stack Frames > > > ------------------------------------ > > > [1]PETSC ERROR: Note: The EXACT line numbers in the stack are not > > > available, > > > [1]PETSC ERROR: INSTEAD the line number of the start of the function > > > [1]PETSC ERROR: is given. > > > [1]PETSC ERROR: [1] F90Array1dCreate line 50 > > > /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c > > > [1]PETSC ERROR: --------------------- Error Message > > > -------------------------------------------------------------- > > > [1]PETSC ERROR: Signal received > > > [1]PETSC ERROR: Seehttp://www.mcs.anl.gov/petsc/documentation/faq.html > > > for > > > trouble shooting. > > > [1]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015 > > > [1]PETSC ERROR: ./ex4f90 on a petsc-3.6.3_debug named b04-036 by Unknown > > > Wed > > > Jun 1 13:23:41 2016 > > > [1]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC > > > --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" > > > --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" > > > --LD_SHARED= > > > --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big > > > --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 > > > --with-scalapack-lib=-SCALAPACK > > > --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug > > > --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 > > > --with-hypre=1 > > > --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4 > > > [1]PETSC ERROR: #2 User provided function() line 0 in unknown file > > > gging=1 --useThreads=0 --with-hypre=1 > > > --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4 > > > [0]PETSC ERROR: #2 User provided function() line 0 in unknown file > > > [ERR.] PLE 0019 plexec One of MPI processes was > > > aborted.(rank=0)(nid=0x04180034)(CODE=1938,793745140674134016,15104) > > > [t00196 at b04-036 tutorials]$ > > > [ERR.] PLE 0021 plexec The interactive job has aborted with the > > > signal.(sig=24) > > > [INFO] PJM 0083 pjsub Interactive job 5211401 completed. > > > > > > Thank you > > > > > > Yours sincerely, > > > > > > TAY wee-beng > > > > > > On 1/6/2016 12:21 PM, Satish Balay wrote: > > > > Do PETSc examples using VecGetArrayF90() work? > > > > > > > > say src/vec/vec/examples/tutorials/ex4f90.F > > > > > > > > Satish > > > > > > > > On Tue, 31 May 2016, TAY wee-beng wrote: > > > > > > > > > Hi, > > > > > > > > > > I'm trying to run my MPI CFD code on Japan's K computer. My code can > > > > > run > > > > > if I > > > > > didn't make use of the PETSc DMDAVecGetArrayF90 subroutine. If it's > > > > > called > > > > > > > > > > call DMDAVecGetArrayF90(da_u,u_local,u_array,ierr) > > > > > > > > > > I get the error below. I have no problem with my code on other > > > > > clusters > > > > > using > > > > > the new Intel compilers. I used to have problems with DM when using > > > > > the > > > > > old > > > > > Intel compilers. Now on the K computer, I'm using Fujitsu's Fortran > > > > > compiler. > > > > > How can I troubleshoot? > > > > > > > > > > Btw, I also tested on the ex13f90 example and it didn't work too. The > > > > > error is > > > > > below. > > > > > > > > > > > > > > > My code error: > > > > > > > > > > /* size_x,size_y,size_z 76x130x136*//* > > > > > *//* total grid size = 1343680*//* > > > > > *//* recommended cores (50k / core) = 26.87360000000000*//* > > > > > *//* 0*//* > > > > > *//* 1*//* > > > > > *//* 1*//* > > > > > *//*[3]PETSC ERROR: [1]PETSC ERROR: > > > > > ------------------------------------------------------------------------*//* > > > > > *//*[1]PETSC ERROR: Caught signal number 11 SEGV: Segmentation > > > > > Violation, > > > > > probably memory access out of range*//* > > > > > *//*[1]PETSC ERROR: Try option -start_in_debugger or > > > > > -on_error_attach_debugger*//* > > > > > *//*[1]PETSC ERROR: or see > > > > > http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* > > > > > *//*[1]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple > > > > > Mac > > > > > OS X > > > > > to find memory corruption errors*//* > > > > > *//*[1]PETSC ERROR: likely location of problem given in stack > > > > > below*//* > > > > > *//*[1]PETSC ERROR: --------------------- Stack Frames > > > > > ------------------------------------*//* > > > > > *//*[1]PETSC ERROR: Note: The EXACT line numbers in the stack are not > > > > > available,*//* > > > > > *//*[1]PETSC ERROR: INSTEAD the line number of the start of the > > > > > function*//* > > > > > *//*[1]PETSC ERROR: is given.*//* > > > > > *//*[1]PETSC ERROR: [1] F90Array3dCreate line 244 > > > > > /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* > > > > > *//* 1*//* > > > > > *//*------------------------------------------------------------------------*//* > > > > > *//*[3]PETSC ERROR: Caught signal number 11 SEGV: Segmentation > > > > > Violation, > > > > > probably memory access out of range*//* > > > > > *//*[3]PETSC ERROR: Try option -start_in_debugger or > > > > > -on_error_attach_debugger*//* > > > > > *//*[3]PETSC ERROR: or see > > > > > http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* > > > > > *//*[3]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple > > > > > Mac > > > > > OS X > > > > > to find memory corruption errors*//* > > > > > *//*[3]PETSC ERROR: likely location of problem given in stack > > > > > below*//* > > > > > *//*[3]PETSC ERROR: --------------------- Stack Frames > > > > > ------------------------------------*//* > > > > > *//*[0]PETSC ERROR: > > > > > ------------------------------------------------------------------------*//* > > > > > *//*[0]PETSC ERROR: Caught signal number 11 SEGV: Segmentation > > > > > Violation, > > > > > probably memory access out of range*//* > > > > > *//*[0]PETSC ERROR: Try option -start_in_debugger or > > > > > -on_error_attach_debugger*//* > > > > > *//*[0]PETSC ERROR: or see > > > > > http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* > > > > > *//*[0]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple > > > > > Mac > > > > > OS X > > > > > to find memory corruption errors*//* > > > > > *//*[0]PETSC ERROR: likely location of problem given in stack > > > > > below*//* > > > > > *//*[0]PETSC ERROR: --------------------- Stack Frames > > > > > ------------------------------------*//* > > > > > *//*[0]PETSC ERROR: Note: The EXACT line numbers in the stack are not > > > > > available,*//* > > > > > *//*[0]PETSC ERROR: INSTEAD the line number of the start of the > > > > > function*//* > > > > > *//*[0]PETSC ERROR: is given.*//* > > > > > *//*[0]PETSC ERROR: [0] F90Array3dCreate line 244 > > > > > /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* > > > > > *//*[0]PETSC ERROR: --------------------- Error Message > > > > > ----------------------------------------- 1*//* > > > > > *//*[2]PETSC ERROR: > > > > > ------------------------------------------------------------------------*//* > > > > > *//*[2]PETSC ERROR: Caught signal number 11 SEGV: Segmentation > > > > > Violation, > > > > > probably memory access out of range*//* > > > > > *//*[2]PETSC ERROR: Try option -start_in_debugger or > > > > > -on_error_attach_debugger*//* > > > > > *//*[2]PETSC ERROR: or see > > > > > http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* > > > > > *//*[2]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple > > > > > Mac > > > > > OS X > > > > > to find memory corruption errors*//* > > > > > *//*[2]PETSC ERROR: likely location of problem given in stack > > > > > below*//* > > > > > *//*[2]PETSC ERROR: --------------------- Stack Frames > > > > > ------------------------------------*//* > > > > > *//*[2]PETSC ERROR: Note: The EXACT line numbers in the stack are not > > > > > available,*//* > > > > > *//*[2]PETSC ERROR: INSTEAD the line number of the start of the > > > > > function*//* > > > > > *//*[2]PETSC ERROR: is given.*//* > > > > > *//*[2]PETSC ERROR: [2] F90Array3dCreate line 244 > > > > > /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* > > > > > *//*[2]PETSC ERROR: --------------------- Error Message > > > > > -----------------------------------------[3]PETSC ERROR: Note: The > > > > > EXACT > > > > > line > > > > > numbers in the stack are not available,*//* > > > > > *//*[3]PETSC ERROR: INSTEAD the line number of the start of the > > > > > function*//* > > > > > *//*[3]PETSC ERROR: is given.*//* > > > > > *//*[3]PETSC ERROR: [3] F90Array3dCreate line 244 > > > > > /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* > > > > > *//*[3]PETSC ERROR: --------------------- Error Message > > > > > --------------------------------------------------------------*//* > > > > > *//*[3]PETSC ERROR: Signal received*//* > > > > > *//*[3]PETSC ERROR: See > > > > > http://www.mcs.anl.gov/petsc/documentation/faq.html > > > > > for trouble shooting.*//* > > > > > *//*[3]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015*//* > > > > > *//*[3]PETSC ERROR: ./a-debug.out on a petsc-3.6.3_debug named b04-036 > > > > > by > > > > > Unknown Wed Jun 1 12:54:34 2016*//* > > > > > *//*[3]PETSC ERROR: Configure options --with-cc=mpifcc > > > > > --with-cxx=mpiFCC > > > > > --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg > > > > > -O0" > > > > > --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" > > > > > --LD_SHARED= > > > > > --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big > > > > > --with-shared----------------------*//* > > > > > *//*[0]PETSC ERROR: Signal received*//* > > > > > *//*[0]PETSC ERROR: See > > > > > http://www.mcs.anl.gov/petsc/documentation/faq.html > > > > > for trouble shooting.*//* > > > > > *//*[0]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015*//* > > > > > *//*[0]PETSC ERROR: ./a-debug.out on a petsc-3.6.3_debug named b04-036 > > > > > by > > > > > Unknown Wed Jun 1 12:54:34 2016*//* > > > > > *//*[0]PETSC ERROR: Configure options --with-cc=mpifcc > > > > > --with-cxx=mpiFCC > > > > > --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg > > > > > -O0" > > > > > --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" > > > > > --LD_SHARED= > > > > > --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big > > > > > --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 > > > > > --with-scalapack-lib=-SCALAPACK > > > > > --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug > > > > > --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 > > > > > --with-hypre=1 > > > > > --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4*//* > > > > > *//*[0]PETSC ERROR: #1 User provided function() line 0 in unknown > > > > > file*//* > > > > > *//*--------------------------------------------------------------------------*//* > > > > > *//*[m---------------------*//* > > > > > *//*[2]PETSC ERROR: Signal received*//* > > > > > *//*[2]PETSC ERROR: See > > > > > http://www.mcs.anl.gov/petsc/documentation/faq.html > > > > > for trouble shooting.*//* > > > > > *//*[2]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015*//* > > > > > *//*[2]PETSC ERROR: ./a-debug.out on a petsc-3.6.3_debug named b04-036 > > > > > by > > > > > Unknown Wed Jun 1 12:54:34 2016*//* > > > > > *//*[2]PETSC ERROR: Configure options --with-cc=mpifcc > > > > > --with-cxx=mpiFCC > > > > > --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg > > > > > -O0" > > > > > --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" > > > > > --LD_SHARED= > > > > > --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big > > > > > --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 > > > > > --with-scalapack-lib=-SCALAPACK > > > > > --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug > > > > > --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 > > > > > --with-hypre=1 > > > > > --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4*//* > > > > > *//*[2]PETSC ERROR: #1 User provided function() line 0 in unknown > > > > > file*//* > > > > > *//*--------------------------------------------------------------------------*//* > > > > > *//*[m[1]PETSC ERROR: --------------------- Error Message > > > > > --------------------------------------------------------------*//* > > > > > *//*[1]PETSC ERROR: Signal received*//* > > > > > *//*[1]PETSC ERROR: See > > > > > http://www.mcs.anl.gov/petsc/documentation/faq.html > > > > > for trouble shooting.*//* > > > > > *//*[1]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015*//* > > > > > *//*[1]PETSC ERROR: ./a-debug.out on a petsc-3.6.3_debug named b04-036 > > > > > by > > > > > Unknown Wed Jun 1 12:54:34 2016*//* > > > > > *//*[1]PETSC ERROR: Configure options --with-cc=mpifcc > > > > > --with-cxx=mpiFCC > > > > > --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg > > > > > -O0" > > > > > --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" > > > > > --LD_SHARED= > > > > > --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big > > > > > --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 > > > > > --with-scalapack-lib=-SCALAPACK > > > > > --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug > > > > > --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 > > > > > --with-hypre=1 > > > > > --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4*//* > > > > > *//*[1]PETSC ERROR: #1 User provided function() line 0 ilibraries=0 > > > > > --with-blas-lapack-lib=-SSL2 --with-scalapack-lib=-SCALAPACK > > > > > --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug > > > > > --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 > > > > > --with-hypre=1 > > > > > --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4*//* > > > > > *//*[3]PETSC ERROR: #1 User provided function() line 0 in unknown > > > > > file*//* > > > > > *//*--------------------------------------------------------------------------*//* > > > > > *//*[mpi::mpi-api::mpi-abort]*//* > > > > > *//*MPI_ABORT was invoked on rank 3 in communicator MPI_COMM_WORLD*//* > > > > > *//*with errorcode 59.*//* > > > > > *//* > > > > > *//*NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI > > > > > processes.*//* > > > > > *//*You may or may not see output from other processes, depending > > > > > on*//* > > > > > *//*exactly when Open MPI kills them.*//* > > > > > *//*--------------------------------------------------------------------------*//* > > > > > *//*[b04-036:28416] > > > > > /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_errmgr_base_error_abort+0x84) > > > > > [0xffffffff11360404]*//* > > > > > *//*[b04-036:28416] > > > > > /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(ompi_mpi_abort+0x51c) > > > > > [0xffffffff1110391c]*//* > > > > > *//*[b04-036:28416] > > > > > /opt/FJSVtclang/GM-1.2.0-2pi::mpi-api::mpi-abort]*//* > > > > > *//*MPI_ABORT was invoked on rank 2 in communicator MPI_COMM_WORLD*//* > > > > > *//*with errorcode 59.*/ > > > > > > > > > > ex13f90 error: > > > > > > > > > > > > > > > /*[t00196 at b04-036 tutorials]$ mpiexec -np 2 ./ex13f90*//* > > > > > *//*jwe1050i-w The hardware barrier couldn't be used and continues > > > > > processing > > > > > using the software barrier.*//* > > > > > *//*taken to (standard) corrective action, execution continuing.*//* > > > > > *//*jwe1050i-w The hardware barrier couldn't be used and continues > > > > > processing > > > > > using the software barrier.*//* > > > > > *//*taken to (standard) corrective action, execution continuing.*//* > > > > > *//* Hi! We're solving van der Pol using 2 processes.*//* > > > > > *//* > > > > > *//* t x1 x2*//* > > > > > *//*[1]PETSC ERROR: > > > > > ------------------------------------------------------------------------*//* > > > > > *//*[1]PETSC ERROR: Caught signal number 10 BUS: Bus Error, possibly > > > > > illegal > > > > > memory access*//* > > > > > *//*[1]PETSC ERROR: Try option -start_in_debugger or > > > > > -on_error_attach_debugger*//* > > > > > *//*[0]PETSC ERROR: > > > > > ------------------------------------------------------------------------*//* > > > > > *//*[0]PETSC ERROR: Caught signal number 10 BUS: Bus Error, possibly > > > > > illegal > > > > > memory access*//* > > > > > *//*[0]PETSC ERROR: Try option -start_in_debugger or > > > > > -on_error_attach_debugger*//* > > > > > *//*[0]PETSC ERROR: or see > > > > > http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* > > > > > *//*[0]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple > > > > > Mac > > > > > OS X > > > > > to find memory corruption errors*//* > > > > > *//*[1]PETSC ERROR: or see > > > > > http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* > > > > > *//*[1]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple > > > > > Mac > > > > > OS X > > > > > to find memory corruption errors*//* > > > > > *//*[1]PETSC ERROR: likely location of problem given in stack > > > > > below*//* > > > > > *//*[1]PETSC ERROR: --------------------- Stack Frames > > > > > ------------------------------------*//* > > > > > *//*[1]PETSC ERROR: Note: The EXACT line numbers in the stack are not > > > > > available,*//* > > > > > *//*[1]PETSC ERROR: INSTEAD the line number of the start of the > > > > > function*//* > > > > > *//*[1]PETSC ERROR: is given.*//* > > > > > *//*[1]PETSC ERROR: [1] F90Array4dCreate line 337 > > > > > /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* > > > > > *//*[0]PETSC ERROR: likely location of problem given in stack > > > > > below*//* > > > > > *//*[0]PETSC ERROR: --------------------- Stack Frames > > > > > ------------------------------------*//* > > > > > *//*[0]PETSC ERROR: Note: The EXACT line numbers in the stack are not > > > > > available,*//* > > > > > *//*[0]PETSC ERROR: INSTEAD the line number of the start of the > > > > > function*//* > > > > > *//*[0]PETSC ERROR: is given.*//* > > > > > *//*[0]PETSC ERROR: [0] F90Array4dCreate line 337 > > > > > /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* > > > > > *//*[1]PETSC ERROR: --------------------- Error Message > > > > > --------------------------------------------------------------*//* > > > > > *//*[1]PETSC ERROR: Signal received*//* > > > > > *//*[1]PETSC ERROR: See > > > > > http://www.mcs.anl.gov/petsc/documentation/faq.html > > > > > for trouble shooting.*//* > > > > > *//*[1]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015*//* > > > > > *//*[1]PETSC ERROR: ./ex13f90 on a petsc-3.6.3_debug named b04-036 by > > > > > Unknown > > > > > Wed Jun 1 13:04:34 2016*//* > > > > > *//*[1]PETSC ERROR: Configure options --with-cc=mpifcc > > > > > --with-cxx=mpiFCC > > > > > --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg > > > > > -O0" > > > > > --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" > > > > > --LD_SHARED= > > > > > --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big > > > > > --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 > > > > > --with-scalapack-lib=-SCALAPACK > > > > > --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug > > > > > --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 > > > > > --with-hypre=1 > > > > > --with-hyp*//* > > > > > */ > > > > > > > > > > > > > > > > > > > > From Michael.Becker at physik.uni-giessen.de Fri Jun 3 09:34:09 2016 From: Michael.Becker at physik.uni-giessen.de (Michael Becker) Date: Fri, 3 Jun 2016 16:34:09 +0200 Subject: [petsc-users] Tuning performance for simple solver In-Reply-To: References: <57515DF2.3090405@physik.uni-giessen.de> Message-ID: <57519561.30502@physik.uni-giessen.de> So using -log_summary helps me find out how much time is actually spent on the PETSc routines that are repeatedly called. Since that part of my code is fairly simple: PetscScalar *barray; VecGetArray(b,&barray); for (int i=0; i Max Max/Min Avg Total > Time (sec): 1.916e+02 1.00055 1.915e+02 > Objects: 1.067e+03 1.00000 1.067e+03 > Flops: 5.730e+10 1.22776 5.360e+10 1.158e+13 > Flops/sec: 2.992e+08 1.22792 2.798e+08 6.044e+10 > MPI Messages: 1.900e+06 3.71429 1.313e+06 2.835e+08 > MPI Message Lengths: 1.138e+09 2.38189 6.824e+02 1.935e+11 > MPI Reductions: 1.462e+05 1.00000 > > Flop counting convention: 1 flop = 1 real number operation of type > (multiply/divide/add/subtract) > e.g., VecAXPY() for real vectors of length > N --> 2N flops > and VecAXPY() for complex vectors of > length N --> 8N flops > > Summary of Stages: ----- Time ------ ----- Flops ----- --- > Messages --- -- Message Lengths -- -- Reductions -- > Avg %Total Avg %Total counts > %Total Avg %Total counts %Total > 0: Main Stage: 1.9154e+02 100.0% 1.1577e+13 100.0% 2.835e+08 > 100.0% 6.824e+02 100.0% 1.462e+05 100.0% > > ------------------------------------------------------------------------------------------------------------------------ > See the 'Profiling' chapter of the users' manual for details on > interpreting output. > Phase summary info: > Count: number of times phase was executed > Time and Flops: Max - maximum over all processors > Ratio - ratio of maximum to minimum over all processors > Mess: number of messages sent > Avg. len: average message length (bytes) > Reduct: number of global reductions > Global: entire computation > Stage: stages of a computation. Set stages with PetscLogStagePush() > and PetscLogStagePop(). > %T - percent time in this phase %F - percent flops in > this phase > %M - percent messages in this phase %L - percent message > lengths in this phase > %R - percent reductions in this phase > Total Mflop/s: 10e-6 * (sum of flops over all processors)/(max time > over all processors) > ------------------------------------------------------------------------------------------------------------------------ > Event Count Time (sec) > Flops --- Global --- --- Stage --- Total > Max Ratio Max Ratio Max Ratio Mess Avg len > Reduct %T %F %M %L %R %T %F %M %L %R Mflop/s > ------------------------------------------------------------------------------------------------------------------------ > > --- Event Stage 0: Main Stage > > KSPGMRESOrthog 70070 1.0 7.8035e+01 2.3 1.94e+10 1.2 0.0e+00 > 0.0e+00 7.0e+04 29 34 0 0 48 29 34 0 0 48 50538 > KSPSetUp 2 1.0 1.5209e-03 1.1 0.00e+00 0.0 0.0e+00 > 0.0e+00 1.0e+01 0 0 0 0 0 0 0 0 0 0 0 > KSPSolve 1001 1.0 1.9097e+02 1.0 5.73e+10 1.2 2.8e+08 > 6.8e+02 1.5e+05100100100100100 100100100100100 60621 > VecMDot 70070 1.0 6.9833e+01 2.8 9.69e+09 1.2 0.0e+00 > 0.0e+00 7.0e+04 25 17 0 0 48 25 17 0 0 48 28235 > VecNorm 74074 1.0 1.1570e+01 1.7 7.28e+08 1.2 0.0e+00 > 0.0e+00 7.4e+04 5 1 0 0 51 5 1 0 0 51 12804 > VecScale 73073 1.0 5.6676e-01 1.3 3.59e+08 1.2 0.0e+00 > 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 128930 > VecCopy 3003 1.0 1.0008e-01 1.6 0.00e+00 0.0 0.0e+00 > 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 > VecSet 77080 1.0 1.3647e+00 1.4 0.00e+00 0.0 0.0e+00 > 0.0e+00 0.0e+00 1 0 0 0 0 1 0 0 0 0 0 > VecAXPY 6006 1.0 1.0779e-01 1.7 5.90e+07 1.2 0.0e+00 > 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 111441 > VecMAXPY 73073 1.0 9.2155e+00 1.3 1.04e+10 1.2 0.0e+00 > 0.0e+00 0.0e+00 4 18 0 0 0 4 18 0 0 0 229192 > VecScatterBegin 73073 1.0 7.0538e+00 4.4 0.00e+00 0.0 2.8e+08 > 6.8e+02 0.0e+00 2 0100100 0 2 0100100 0 0 > VecScatterEnd 73073 1.0 7.8382e+00 2.6 0.00e+00 0.0 0.0e+00 > 0.0e+00 0.0e+00 3 0 0 0 0 3 0 0 0 0 0 > VecNormalize 73073 1.0 1.1774e+01 1.6 1.08e+09 1.2 0.0e+00 > 0.0e+00 7.3e+04 5 2 0 0 50 5 2 0 0 50 18619 > MatMult 73073 1.0 8.6056e+01 1.7 1.90e+10 1.3 2.8e+08 > 6.8e+02 0.0e+00 36 33100100 0 36 33100100 0 44093 > MatSolve 74074 1.0 5.4865e+01 1.2 1.71e+10 1.2 0.0e+00 > 0.0e+00 0.0e+00 27 30 0 0 0 27 30 0 0 0 63153 > MatLUFactorNum 1 1.0 4.1230e-03 2.6 9.89e+05241.4 0.0e+00 > 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 36155 > MatILUFactorSym 1 1.0 2.1942e-03 1.3 0.00e+00 0.0 0.0e+00 > 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 > MatAssemblyBegin 2 1.0 5.6112e-03 4.8 0.00e+00 0.0 0.0e+00 > 0.0e+00 4.0e+00 0 0 0 0 0 0 0 0 0 0 0 > MatAssemblyEnd 2 1.0 6.3889e-03 1.0 0.00e+00 0.0 7.8e+03 > 1.7e+02 8.0e+00 0 0 0 0 0 0 0 0 0 0 0 > MatGetRowIJ 1 1.0 2.8849e-0515.1 0.00e+00 0.0 0.0e+00 > 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 > MatGetOrdering 1 1.0 1.2279e-04 1.6 0.00e+00 0.0 0.0e+00 > 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 > PCSetUp 2 1.0 6.6662e-03 1.8 9.89e+05241.4 0.0e+00 > 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 22361 > PCSetUpOnBlocks 1001 1.0 7.5164e-03 1.7 9.89e+05241.4 0.0e+00 > 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 19832 > PCApply 74074 1.0 5.9613e+01 1.2 1.71e+10 1.2 0.0e+00 > 0.0e+00 0.0e+00 29 30 0 0 0 29 30 0 0 0 58123 > ------------------------------------------------------------------------------------------------------------------------ > > Memory usage is given in bytes: > > Object Type Creations Destructions Memory Descendants' Mem. > Reports information only for process 0. > > --- Event Stage 0: Main Stage > > Krylov Solver 2 2 19576 0. > DMKSP interface 1 1 656 0. > Vector 1043 1043 42492328 0. > Vector Scatter 2 2 41496 0. > Matrix 4 4 3163588 0. > Distributed Mesh 1 1 5080 0. > Star Forest Bipartite Graph 2 2 1728 0. > Discrete System 1 1 872 0. > Index Set 7 7 71796 0. > IS L to G Mapping 1 1 28068 0. > Preconditioner 2 2 1912 0. > Viewer 1 0 0 0. > ======================================================================================================================== > Average time to get PetscTime(): 1.90735e-07 > Average time for MPI_Barrier(): 0.000184202 > Average time for zero size MPI_Send(): 1.03469e-05 > #PETSc Option Table entries: > -log_summary > #End of PETSc Option Table entries > Compiled without FORTRAN kernels > Compiled with full precision matrices (default) > sizeof(short) 2 sizeof(int) 4 sizeof(long) 8 sizeof(void*) 8 > sizeof(PetscScalar) 8 sizeof(PetscInt) 4 > Configure options: --download-f2cblaslapack --with-fc=0 > --with-debugging=0 COPTFLAGS=-O3 CXXOPTFLAGS=-O3 Regarding Matt's answer: It's generally a rectangular grid (3D) of predetermined size (not necessarily a cube). Additionally, objects of arbitrary shape can be defined by Dirichlet boundary conditions. Is geometric MG still viable? Thanks, Michael Am 03.06.2016 um 14:32 schrieb Matthew Knepley: > On Fri, Jun 3, 2016 at 5:56 AM, Dave May > wrote: > > On 3 June 2016 at 11:37, Michael Becker > > wrote: > > Dear all, > > I have a few questions regarding possible performance > enhancements for the PETSc solver I included in my project. > > It's a particle-in-cell plasma simulation written in C++, > where Poisson's equation needs to be solved repeatedly on > every timestep. > The simulation domain is discretized using finite differences, > so the solver therefore needs to be able to efficiently solve > the linear system A x = b successively with changing b. The > solution x of the previous timestep is generally a good > initial guess for the solution. > > I wrote a class PETScSolver that holds all PETSc objects and > necessary information about domain size and decomposition. To > solve the linear system, two arrays, 'phi' and 'charge', are > passed to a member function solve(), where they are copied to > PETSc vectors, and KSPSolve() is called. After convergence, > the solution is then transferred again to the phi array so > that other program parts can use it. > > The matrix is created using DMDA. An array 'bound' is used to > determine whether a node is either a Dirichlet BC or holds a > charge. > > I attached three files, petscsolver.h, petscsolver.cpp and > main.cpp, that contain a shortened version of the solver class > and a set-up to initialize and run a simple problem. > > Is there anything I can change to generally make the program > run faster? > > > Before changing anything, you should profile your code to see > where time is being spent. > > To that end, you should compile an optimized build of petsc, link > it to you application and run your code with the option > -log_summary. The -log_summary flag will generate a performance > profile of specific functionality within petsc (KSPSolve, MatMult > etc) so you can see where all the time is being spent. > > As a second round of profiling, you should consider registering > specific functionality in your code you think is performance > critical. > You can do this using the function PetscLogStageRegister() > > http://www.mcs.anl.gov/petsc/petsc-current/docs/manualpages/Profiling/PetscLogStageRegister.html > > > Check out the examples listed at the bottom of this web page to > see how to log stages. Once you've registered stages, these will > appear in the report provided by -log_summary > > > Do everything Dave said. I will also note that since you are using FD, > I am guessing you are solving on a square. Then > you should really be using geometric MG. We support this through the > DMDA object. > > Thanks, > > Matt > > Thanks, > Dave > > > And, since I'm rather unexperienced with KSP methods, how do I > efficiently choose PC and KSP? Just by testing every combination? > Would multigrid be a viable option as a pure solver (-ksp_type > preonly)? > > Thanks, > Michael > > > > > > -- > What most experimenters take for granted before they begin their > experiments is infinitely more interesting than any results to which > their experiments lead. > -- Norbert Wiener -------------- next part -------------- An HTML attachment was scrubbed... URL: From knepley at gmail.com Fri Jun 3 09:52:04 2016 From: knepley at gmail.com (Matthew Knepley) Date: Fri, 3 Jun 2016 09:52:04 -0500 Subject: [petsc-users] Tuning performance for simple solver In-Reply-To: <57519561.30502@physik.uni-giessen.de> References: <57515DF2.3090405@physik.uni-giessen.de> <57519561.30502@physik.uni-giessen.de> Message-ID: On Fri, Jun 3, 2016 at 9:34 AM, Michael Becker < Michael.Becker at physik.uni-giessen.de> wrote: > So using -log_summary helps me find out how much time is actually spent on > the PETSc routines that are repeatedly called. Since that part of my code > is fairly simple: > > PetscScalar *barray; > VecGetArray(b,&barray); > for (int i=0; i if (bound[i]==0) > barray[i] = charge[i]*ih*iepsilon0; > else > barray[i] = phi[i]; > } > VecRestoreArray(b,&barray); > > KSPSolve(ksp,b,x); > > KSPGetSolution(ksp,&x); > PetscScalar *xarray; > VecGetArray(x,&xarray); > for (int i=0; i phi[i] = xarray[i]; > VecRestoreArray(x,&xarray); > > , I don't see how additional log states would help me. So I would then > still just test which KSP method is the fastest? > > I ran a test over 1000 iterations; this is the output: > > Max Max/Min Avg Total > Time (sec): 1.916e+02 1.00055 1.915e+02 > Objects: 1.067e+03 1.00000 1.067e+03 > Flops: 5.730e+10 1.22776 5.360e+10 1.158e+13 > Flops/sec: 2.992e+08 1.22792 2.798e+08 6.044e+10 > MPI Messages: 1.900e+06 3.71429 1.313e+06 2.835e+08 > MPI Message Lengths: 1.138e+09 2.38189 6.824e+02 1.935e+11 > MPI Reductions: 1.462e+05 1.00000 > > Flop counting convention: 1 flop = 1 real number operation of type > (multiply/divide/add/subtract) > e.g., VecAXPY() for real vectors of length N > --> 2N flops > and VecAXPY() for complex vectors of length N > --> 8N flops > > Summary of Stages: ----- Time ------ ----- Flops ----- --- Messages > --- -- Message Lengths -- -- Reductions -- > Avg %Total Avg %Total counts > %Total Avg %Total counts %Total > 0: Main Stage: 1.9154e+02 100.0% 1.1577e+13 100.0% 2.835e+08 > 100.0% 6.824e+02 100.0% 1.462e+05 100.0% > > > ------------------------------------------------------------------------------------------------------------------------ > See the 'Profiling' chapter of the users' manual for details on > interpreting output. > Phase summary info: > Count: number of times phase was executed > Time and Flops: Max - maximum over all processors > Ratio - ratio of maximum to minimum over all processors > Mess: number of messages sent > Avg. len: average message length (bytes) > Reduct: number of global reductions > Global: entire computation > Stage: stages of a computation. Set stages with PetscLogStagePush() and > PetscLogStagePop(). > %T - percent time in this phase %F - percent flops in this > phase > %M - percent messages in this phase %L - percent message lengths > in this phase > %R - percent reductions in this phase > Total Mflop/s: 10e-6 * (sum of flops over all processors)/(max time > over all processors) > > ------------------------------------------------------------------------------------------------------------------------ > Event Count Time (sec) > Flops --- Global --- --- Stage --- Total > Max Ratio Max Ratio Max Ratio Mess Avg len > Reduct %T %F %M %L %R %T %F %M %L %R Mflop/s > > ------------------------------------------------------------------------------------------------------------------------ > > --- Event Stage 0: Main Stage > > KSPGMRESOrthog 70070 1.0 7.8035e+01 2.3 1.94e+10 1.2 0.0e+00 0.0e+00 > 7.0e+04 29 34 0 0 48 29 34 0 0 48 50538 > KSPSetUp 2 1.0 1.5209e-03 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 > 1.0e+01 0 0 0 0 0 0 0 0 0 0 0 > KSPSolve 1001 1.0 1.9097e+02 1.0 5.73e+10 1.2 2.8e+08 6.8e+02 > 1.5e+05100100100100100 100100100100100 60621 > VecMDot 70070 1.0 6.9833e+01 2.8 9.69e+09 1.2 0.0e+00 0.0e+00 > 7.0e+04 25 17 0 0 48 25 17 0 0 48 28235 > VecNorm 74074 1.0 1.1570e+01 1.7 7.28e+08 1.2 0.0e+00 0.0e+00 > 7.4e+04 5 1 0 0 51 5 1 0 0 51 12804 > VecScale 73073 1.0 5.6676e-01 1.3 3.59e+08 1.2 0.0e+00 0.0e+00 > 0.0e+00 0 1 0 0 0 0 1 0 0 0 128930 > VecCopy 3003 1.0 1.0008e-01 1.6 0.00e+00 0.0 0.0e+00 0.0e+00 > 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 > VecSet 77080 1.0 1.3647e+00 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 > 0.0e+00 1 0 0 0 0 1 0 0 0 0 0 > VecAXPY 6006 1.0 1.0779e-01 1.7 5.90e+07 1.2 0.0e+00 0.0e+00 > 0.0e+00 0 0 0 0 0 0 0 0 0 0 111441 > VecMAXPY 73073 1.0 9.2155e+00 1.3 1.04e+10 1.2 0.0e+00 0.0e+00 > 0.0e+00 4 18 0 0 0 4 18 0 0 0 229192 > VecScatterBegin 73073 1.0 7.0538e+00 4.4 0.00e+00 0.0 2.8e+08 6.8e+02 > 0.0e+00 2 0100100 0 2 0100100 0 0 > VecScatterEnd 73073 1.0 7.8382e+00 2.6 0.00e+00 0.0 0.0e+00 0.0e+00 > 0.0e+00 3 0 0 0 0 3 0 0 0 0 0 > VecNormalize 73073 1.0 1.1774e+01 1.6 1.08e+09 1.2 0.0e+00 0.0e+00 > 7.3e+04 5 2 0 0 50 5 2 0 0 50 18619 > MatMult 73073 1.0 8.6056e+01 1.7 1.90e+10 1.3 2.8e+08 6.8e+02 > 0.0e+00 36 33100100 0 36 33100100 0 44093 > MatSolve 74074 1.0 5.4865e+01 1.2 1.71e+10 1.2 0.0e+00 0.0e+00 > 0.0e+00 27 30 0 0 0 27 30 0 0 0 63153 > MatLUFactorNum 1 1.0 4.1230e-03 2.6 9.89e+05241.4 0.0e+00 0.0e+00 > 0.0e+00 0 0 0 0 0 0 0 0 0 0 36155 > MatILUFactorSym 1 1.0 2.1942e-03 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 > 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 > MatAssemblyBegin 2 1.0 5.6112e-03 4.8 0.00e+00 0.0 0.0e+00 0.0e+00 > 4.0e+00 0 0 0 0 0 0 0 0 0 0 0 > MatAssemblyEnd 2 1.0 6.3889e-03 1.0 0.00e+00 0.0 7.8e+03 1.7e+02 > 8.0e+00 0 0 0 0 0 0 0 0 0 0 0 > MatGetRowIJ 1 1.0 2.8849e-0515.1 0.00e+00 0.0 0.0e+00 0.0e+00 > 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 > MatGetOrdering 1 1.0 1.2279e-04 1.6 0.00e+00 0.0 0.0e+00 0.0e+00 > 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 > PCSetUp 2 1.0 6.6662e-03 1.8 9.89e+05241.4 0.0e+00 0.0e+00 > 0.0e+00 0 0 0 0 0 0 0 0 0 0 22361 > PCSetUpOnBlocks 1001 1.0 7.5164e-03 1.7 9.89e+05241.4 0.0e+00 0.0e+00 > 0.0e+00 0 0 0 0 0 0 0 0 0 0 19832 > PCApply 74074 1.0 5.9613e+01 1.2 1.71e+10 1.2 0.0e+00 0.0e+00 > 0.0e+00 29 30 0 0 0 29 30 0 0 0 58123 > > ------------------------------------------------------------------------------------------------------------------------ > > Memory usage is given in bytes: > > Object Type Creations Destructions Memory Descendants' Mem. > Reports information only for process 0. > > --- Event Stage 0: Main Stage > > Krylov Solver 2 2 19576 0. > DMKSP interface 1 1 656 0. > Vector 1043 1043 42492328 0. > Vector Scatter 2 2 41496 0. > Matrix 4 4 3163588 0. > Distributed Mesh 1 1 5080 0. > Star Forest Bipartite Graph 2 2 1728 0. > Discrete System 1 1 872 0. > Index Set 7 7 71796 0. > IS L to G Mapping 1 1 28068 0. > Preconditioner 2 2 1912 0. > Viewer 1 0 0 0. > > ======================================================================================================================== > Average time to get PetscTime(): 1.90735e-07 > Average time for MPI_Barrier(): 0.000184202 > Average time for zero size MPI_Send(): 1.03469e-05 > #PETSc Option Table entries: > -log_summary > #End of PETSc Option Table entries > Compiled without FORTRAN kernels > Compiled with full precision matrices (default) > sizeof(short) 2 sizeof(int) 4 sizeof(long) 8 sizeof(void*) 8 > sizeof(PetscScalar) 8 sizeof(PetscInt) 4 > Configure options: --download-f2cblaslapack --with-fc=0 --with-debugging=0 > COPTFLAGS=-O3 CXXOPTFLAGS=-O3 > > > Regarding Matt's answer: It's generally a rectangular grid (3D) of > predetermined size (not necessarily a cube). Additionally, objects of > arbitrary shape can be defined by Dirichlet boundary conditions. Is > geometric MG still viable? > a) 1000 iterates is way too much (usually) b) "objects of arbitrary shape can be defined by Dirichlet boundary conditions" I have no idea what this means. If you are doing the Immersed Boundary Method, you can still do GMG but its subtle. In anything but the Cartesian case, you probably want to just use AMG, -pc_type gamg. It has a bigger setup time, but still < 10 iterates usually. Thanks, Matt > Thanks, > Michael > > > Am 03.06.2016 um 14:32 schrieb Matthew Knepley: > > On Fri, Jun 3, 2016 at 5:56 AM, Dave May wrote: > >> On 3 June 2016 at 11:37, Michael Becker < >> >> Michael.Becker at physik.uni-giessen.de> wrote: >> >>> Dear all, >>> >>> I have a few questions regarding possible performance enhancements for >>> the PETSc solver I included in my project. >>> >>> It's a particle-in-cell plasma simulation written in C++, where >>> Poisson's equation needs to be solved repeatedly on every timestep. >>> The simulation domain is discretized using finite differences, so the >>> solver therefore needs to be able to efficiently solve the linear system A >>> x = b successively with changing b. The solution x of the previous timestep >>> is generally a good initial guess for the solution. >>> >>> I wrote a class PETScSolver that holds all PETSc objects and necessary >>> information about domain size and decomposition. To solve the linear >>> system, two arrays, 'phi' and 'charge', are passed to a member function >>> solve(), where they are copied to PETSc vectors, and KSPSolve() is called. >>> After convergence, the solution is then transferred again to the phi array >>> so that other program parts can use it. >>> >>> The matrix is created using DMDA. An array 'bound' is used to determine >>> whether a node is either a Dirichlet BC or holds a charge. >>> >>> I attached three files, petscsolver.h, petscsolver.cpp and main.cpp, >>> that contain a shortened version of the solver class and a set-up to >>> initialize and run a simple problem. >>> >>> Is there anything I can change to generally make the program run faster? >>> >> >> Before changing anything, you should profile your code to see where time >> is being spent. >> >> To that end, you should compile an optimized build of petsc, link it to >> you application and run your code with the option -log_summary. The >> -log_summary flag will generate a performance profile of specific >> functionality within petsc (KSPSolve, MatMult etc) so you can see where all >> the time is being spent. >> >> As a second round of profiling, you should consider registering specific >> functionality in your code you think is performance critical. >> You can do this using the function PetscLogStageRegister() >> >> >> http://www.mcs.anl.gov/petsc/petsc-current/docs/manualpages/Profiling/PetscLogStageRegister.html >> >> Check out the examples listed at the bottom of this web page to see how >> to log stages. Once you've registered stages, these will appear in the >> report provided by -log_summary >> > > Do everything Dave said. I will also note that since you are using FD, I > am guessing you are solving on a square. Then > you should really be using geometric MG. We support this through the DMDA > object. > > Thanks, > > Matt > > >> Thanks, >> Dave >> >> >> And, since I'm rather unexperienced with KSP methods, how do I >>> efficiently choose PC and KSP? Just by testing every combination? >>> Would multigrid be a viable option as a pure solver (-ksp_type preonly)? >>> >>> Thanks, >>> Michael >>> >> >> > > > -- > What most experimenters take for granted before they begin their > experiments is infinitely more interesting than any results to which their > experiments lead. > -- Norbert Wiener > > > -- What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead. -- Norbert Wiener -------------- next part -------------- An HTML attachment was scrubbed... URL: From dave.mayhem23 at gmail.com Fri Jun 3 09:56:36 2016 From: dave.mayhem23 at gmail.com (Dave May) Date: Fri, 3 Jun 2016 15:56:36 +0100 Subject: [petsc-users] Tuning performance for simple solver In-Reply-To: <57519561.30502@physik.uni-giessen.de> References: <57515DF2.3090405@physik.uni-giessen.de> <57519561.30502@physik.uni-giessen.de> Message-ID: On 3 June 2016 at 15:34, Michael Becker < Michael.Becker at physik.uni-giessen.de> wrote: > So using -log_summary helps me find out how much time is actually spent on > the PETSc routines that are repeatedly called. Since that part of my code > is fairly simple: > > PetscScalar *barray; > VecGetArray(b,&barray); > for (int i=0; i if (bound[i]==0) > barray[i] = charge[i]*ih*iepsilon0; > else > barray[i] = phi[i]; > } > VecRestoreArray(b,&barray); > > KSPSolve(ksp,b,x); > > KSPGetSolution(ksp,&x); > PetscScalar *xarray; > VecGetArray(x,&xarray); > for (int i=0; i phi[i] = xarray[i]; > VecRestoreArray(x,&xarray); > > Well - you also have user code which assembles a matrix... However it seems assembly is not taking much time. Note that this is not always the case, for instance if the preallocation was done incorrectly. > , I don't see how additional log states would help me. > The point of profiling is to precisely identify calls which consume the most time, rather than just _assuming_ which functions consume the largest fraction of time. Now we are all on the same page and can correct state that the solve is the problem. Without knowing anything other than you are solving Poisson, the simplest preconditioner to try out which can yield scalable and optimal results is algebraic multigrid. Try the option: -pc_type gamg > > So I would then still just test which KSP method is the fastest? > > I ran a test over 1000 iterations; this is the output: > > Max Max/Min Avg Total > Time (sec): 1.916e+02 1.00055 1.915e+02 > Objects: 1.067e+03 1.00000 1.067e+03 > Flops: 5.730e+10 1.22776 5.360e+10 1.158e+13 > Flops/sec: 2.992e+08 1.22792 2.798e+08 6.044e+10 > MPI Messages: 1.900e+06 3.71429 1.313e+06 2.835e+08 > MPI Message Lengths: 1.138e+09 2.38189 6.824e+02 1.935e+11 > MPI Reductions: 1.462e+05 1.00000 > > Flop counting convention: 1 flop = 1 real number operation of type > (multiply/divide/add/subtract) > e.g., VecAXPY() for real vectors of length N > --> 2N flops > and VecAXPY() for complex vectors of length N > --> 8N flops > > Summary of Stages: ----- Time ------ ----- Flops ----- --- Messages > --- -- Message Lengths -- -- Reductions -- > Avg %Total Avg %Total counts > %Total Avg %Total counts %Total > 0: Main Stage: 1.9154e+02 100.0% 1.1577e+13 100.0% 2.835e+08 > 100.0% 6.824e+02 100.0% 1.462e+05 100.0% > > > ------------------------------------------------------------------------------------------------------------------------ > See the 'Profiling' chapter of the users' manual for details on > interpreting output. > Phase summary info: > Count: number of times phase was executed > Time and Flops: Max - maximum over all processors > Ratio - ratio of maximum to minimum over all processors > Mess: number of messages sent > Avg. len: average message length (bytes) > Reduct: number of global reductions > Global: entire computation > Stage: stages of a computation. Set stages with PetscLogStagePush() and > PetscLogStagePop(). > %T - percent time in this phase %F - percent flops in this > phase > %M - percent messages in this phase %L - percent message lengths > in this phase > %R - percent reductions in this phase > Total Mflop/s: 10e-6 * (sum of flops over all processors)/(max time > over all processors) > > ------------------------------------------------------------------------------------------------------------------------ > Event Count Time (sec) > Flops --- Global --- --- Stage --- Total > Max Ratio Max Ratio Max Ratio Mess Avg len > Reduct %T %F %M %L %R %T %F %M %L %R Mflop/s > > ------------------------------------------------------------------------------------------------------------------------ > > --- Event Stage 0: Main Stage > > KSPGMRESOrthog 70070 1.0 7.8035e+01 2.3 1.94e+10 1.2 0.0e+00 0.0e+00 > 7.0e+04 29 34 0 0 48 29 34 0 0 48 50538 > KSPSetUp 2 1.0 1.5209e-03 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 > 1.0e+01 0 0 0 0 0 0 0 0 0 0 0 > KSPSolve 1001 1.0 1.9097e+02 1.0 5.73e+10 1.2 2.8e+08 6.8e+02 > 1.5e+05100100100100100 100100100100100 60621 > VecMDot 70070 1.0 6.9833e+01 2.8 9.69e+09 1.2 0.0e+00 0.0e+00 > 7.0e+04 25 17 0 0 48 25 17 0 0 48 28235 > VecNorm 74074 1.0 1.1570e+01 1.7 7.28e+08 1.2 0.0e+00 0.0e+00 > 7.4e+04 5 1 0 0 51 5 1 0 0 51 12804 > VecScale 73073 1.0 5.6676e-01 1.3 3.59e+08 1.2 0.0e+00 0.0e+00 > 0.0e+00 0 1 0 0 0 0 1 0 0 0 128930 > VecCopy 3003 1.0 1.0008e-01 1.6 0.00e+00 0.0 0.0e+00 0.0e+00 > 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 > VecSet 77080 1.0 1.3647e+00 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 > 0.0e+00 1 0 0 0 0 1 0 0 0 0 0 > VecAXPY 6006 1.0 1.0779e-01 1.7 5.90e+07 1.2 0.0e+00 0.0e+00 > 0.0e+00 0 0 0 0 0 0 0 0 0 0 111441 > VecMAXPY 73073 1.0 9.2155e+00 1.3 1.04e+10 1.2 0.0e+00 0.0e+00 > 0.0e+00 4 18 0 0 0 4 18 0 0 0 229192 > VecScatterBegin 73073 1.0 7.0538e+00 4.4 0.00e+00 0.0 2.8e+08 6.8e+02 > 0.0e+00 2 0100100 0 2 0100100 0 0 > VecScatterEnd 73073 1.0 7.8382e+00 2.6 0.00e+00 0.0 0.0e+00 0.0e+00 > 0.0e+00 3 0 0 0 0 3 0 0 0 0 0 > VecNormalize 73073 1.0 1.1774e+01 1.6 1.08e+09 1.2 0.0e+00 0.0e+00 > 7.3e+04 5 2 0 0 50 5 2 0 0 50 18619 > MatMult 73073 1.0 8.6056e+01 1.7 1.90e+10 1.3 2.8e+08 6.8e+02 > 0.0e+00 36 33100100 0 36 33100100 0 44093 > MatSolve 74074 1.0 5.4865e+01 1.2 1.71e+10 1.2 0.0e+00 0.0e+00 > 0.0e+00 27 30 0 0 0 27 30 0 0 0 63153 > MatLUFactorNum 1 1.0 4.1230e-03 2.6 9.89e+05241.4 0.0e+00 0.0e+00 > 0.0e+00 0 0 0 0 0 0 0 0 0 0 36155 > MatILUFactorSym 1 1.0 2.1942e-03 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 > 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 > MatAssemblyBegin 2 1.0 5.6112e-03 4.8 0.00e+00 0.0 0.0e+00 0.0e+00 > 4.0e+00 0 0 0 0 0 0 0 0 0 0 0 > MatAssemblyEnd 2 1.0 6.3889e-03 1.0 0.00e+00 0.0 7.8e+03 1.7e+02 > 8.0e+00 0 0 0 0 0 0 0 0 0 0 0 > MatGetRowIJ 1 1.0 2.8849e-0515.1 0.00e+00 0.0 0.0e+00 0.0e+00 > 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 > MatGetOrdering 1 1.0 1.2279e-04 1.6 0.00e+00 0.0 0.0e+00 0.0e+00 > 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 > PCSetUp 2 1.0 6.6662e-03 1.8 9.89e+05241.4 0.0e+00 0.0e+00 > 0.0e+00 0 0 0 0 0 0 0 0 0 0 22361 > PCSetUpOnBlocks 1001 1.0 7.5164e-03 1.7 9.89e+05241.4 0.0e+00 0.0e+00 > 0.0e+00 0 0 0 0 0 0 0 0 0 0 19832 > PCApply 74074 1.0 5.9613e+01 1.2 1.71e+10 1.2 0.0e+00 0.0e+00 > 0.0e+00 29 30 0 0 0 29 30 0 0 0 58123 > > ------------------------------------------------------------------------------------------------------------------------ > > Memory usage is given in bytes: > > Object Type Creations Destructions Memory Descendants' Mem. > Reports information only for process 0. > > --- Event Stage 0: Main Stage > > Krylov Solver 2 2 19576 0. > DMKSP interface 1 1 656 0. > Vector 1043 1043 42492328 0. > Vector Scatter 2 2 41496 0. > Matrix 4 4 3163588 0. > Distributed Mesh 1 1 5080 0. > Star Forest Bipartite Graph 2 2 1728 0. > Discrete System 1 1 872 0. > Index Set 7 7 71796 0. > IS L to G Mapping 1 1 28068 0. > Preconditioner 2 2 1912 0. > Viewer 1 0 0 0. > > ======================================================================================================================== > Average time to get PetscTime(): 1.90735e-07 > Average time for MPI_Barrier(): 0.000184202 > Average time for zero size MPI_Send(): 1.03469e-05 > #PETSc Option Table entries: > -log_summary > #End of PETSc Option Table entries > Compiled without FORTRAN kernels > Compiled with full precision matrices (default) > sizeof(short) 2 sizeof(int) 4 sizeof(long) 8 sizeof(void*) 8 > sizeof(PetscScalar) 8 sizeof(PetscInt) 4 > Configure options: --download-f2cblaslapack --with-fc=0 --with-debugging=0 > COPTFLAGS=-O3 CXXOPTFLAGS=-O3 > > > Regarding Matt's answer: It's generally a rectangular grid (3D) of > predetermined size (not necessarily a cube). Additionally, objects of > arbitrary shape can be defined by Dirichlet boundary conditions. Is > geometric MG still viable? > > Thanks, > Michael > > > > Am 03.06.2016 um 14:32 schrieb Matthew Knepley: > > On Fri, Jun 3, 2016 at 5:56 AM, Dave May wrote: > >> On 3 June 2016 at 11:37, Michael Becker < >> >> Michael.Becker at physik.uni-giessen.de> wrote: >> >>> Dear all, >>> >>> I have a few questions regarding possible performance enhancements for >>> the PETSc solver I included in my project. >>> >>> It's a particle-in-cell plasma simulation written in C++, where >>> Poisson's equation needs to be solved repeatedly on every timestep. >>> The simulation domain is discretized using finite differences, so the >>> solver therefore needs to be able to efficiently solve the linear system A >>> x = b successively with changing b. The solution x of the previous timestep >>> is generally a good initial guess for the solution. >>> >>> I wrote a class PETScSolver that holds all PETSc objects and necessary >>> information about domain size and decomposition. To solve the linear >>> system, two arrays, 'phi' and 'charge', are passed to a member function >>> solve(), where they are copied to PETSc vectors, and KSPSolve() is called. >>> After convergence, the solution is then transferred again to the phi array >>> so that other program parts can use it. >>> >>> The matrix is created using DMDA. An array 'bound' is used to determine >>> whether a node is either a Dirichlet BC or holds a charge. >>> >>> I attached three files, petscsolver.h, petscsolver.cpp and main.cpp, >>> that contain a shortened version of the solver class and a set-up to >>> initialize and run a simple problem. >>> >>> Is there anything I can change to generally make the program run faster? >>> >> >> Before changing anything, you should profile your code to see where time >> is being spent. >> >> To that end, you should compile an optimized build of petsc, link it to >> you application and run your code with the option -log_summary. The >> -log_summary flag will generate a performance profile of specific >> functionality within petsc (KSPSolve, MatMult etc) so you can see where all >> the time is being spent. >> >> As a second round of profiling, you should consider registering specific >> functionality in your code you think is performance critical. >> You can do this using the function PetscLogStageRegister() >> >> >> http://www.mcs.anl.gov/petsc/petsc-current/docs/manualpages/Profiling/PetscLogStageRegister.html >> >> Check out the examples listed at the bottom of this web page to see how >> to log stages. Once you've registered stages, these will appear in the >> report provided by -log_summary >> > > Do everything Dave said. I will also note that since you are using FD, I > am guessing you are solving on a square. Then > you should really be using geometric MG. We support this through the DMDA > object. > > Thanks, > > Matt > > >> Thanks, >> Dave >> >> >> And, since I'm rather unexperienced with KSP methods, how do I >>> efficiently choose PC and KSP? Just by testing every combination? >>> Would multigrid be a viable option as a pure solver (-ksp_type preonly)? >>> >>> Thanks, >>> Michael >>> >> >> > > > -- > What most experimenters take for granted before they begin their > experiments is infinitely more interesting than any results to which their > experiments lead. > -- Norbert Wiener > > > -------------- next part -------------- An HTML attachment was scrubbed... URL: From gomer at stanford.edu Fri Jun 3 10:13:56 2016 From: gomer at stanford.edu (Paul Urbanczyk) Date: Fri, 3 Jun 2016 08:13:56 -0700 Subject: [petsc-users] Error with MatView on multiple processors In-Reply-To: References: <95704256-96f8-e5e3-1d60-1af39c209fea@stanford.edu> Message-ID: <13471917-f86e-dffb-4c8d-41af2a4f4779@stanford.edu> For the benefit of anyone else who happens to run into this issue... Earlier in my code, I had used the function DMDAGetAO(DM da, AO *ao), and then destroyed the AO at the end of the function with AODestroy. I'm guessing that, when I did this, I destroyed the AO for the DM, so when it came time to view the matrix, PETSc could not convert the numbering for display. Does this sound right or make sense? Thanks, Paul On 05/27/2016 06:43 PM, Matthew Knepley wrote: > On Fri, May 27, 2016 at 8:38 PM, Paul Urbanczyk > wrote: > > On 05/27/2016 05:44 PM, Matthew Knepley wrote: > >> On Fri, May 27, 2016 at 6:34 PM, Paul Urbanczyk >> > wrote: >> >> Hello, >> >> I'm having trouble with the MatView function drawing the >> matrix structure(s) when I execute my code on multiple >> processors. >> >> When I run on a single processor, the code runs fine, and the >> graphics window displays cleanly. >> >> >> Lets start with an example. I do this >> >> cd $PETSC_DIR/src/snes/examples/tutorials >> make ex19 >> >> Make sure it runs >> >> ./ex19 -snes_monitor >> >> Make sure it runs in parallel (maybe you need >> $PETSC_DIR/$PETSC_ARCH/bin/mpiexec) >> >> mpiexec -n 2 ./ex19 -snes_monitor >> >> Make sure it can draw >> >> mpiexec -n 2 ./ex19 -snes_monitor -mat_view draw -draw_pause 1 >> >> This runs fine for me. Can you try it? >> >> Thanks, >> >> Matt > Hello Matt, > > Yes, this example seems to run just fine. How should I proceed? > > > I am not sure what you are doing in your code. Can you try and change > one of these examples > to do something like what you do? SNEX ex19 seems like it does things > mostly the way you > describe. > > Matt > > > -Paul >> >> When I run with multiple processors, I get error messages >> (see below). >> >> The matrices are constructed with DMCreateMatrix(da, &A_matrix). >> >> I then set the values with >> MatSetValuesStencil(A_matrix,1,&row,2,col_A,value_A,INSERT_VALUES). >> >> Finally, I call MatAssemblyBegin(A_matrix,MAT_FINAL_ASSEMBLY) >> and MatAssemblyEnd(A_matrix,MAT_FINAL_ASSEMBLY). >> >> I also test that the matrices are assembled with >> MatAssembled(A_matrix, &is_assembled_bool), and it appears >> they are successfully assembled. >> >> Any help/advice is greatly appreciated. >> >> Thanks in advance! >> >> -Paul Urbanczyk >> >> [0]PETSC ERROR: --------------------- Error Message >> -------------------------------------------------------------- >> [0]PETSC ERROR: Invalid argument >> [0]PETSC ERROR: Wrong type of object: Parameter # 1 >> [0]PETSC ERROR: See >> http://www.mcs.anl.gov/petsc/documentation/faq.html for >> trouble shooting. >> [0]PETSC ERROR: Petsc Release Version 3.7.1, unknown >> [0]PETSC ERROR: ./urbanSCFD on a arch-linux2-c-debug named >> prometheus by gomer Fri May 27 16:29:01 2016 >> [0]PETSC ERROR: Configure options --with-cc=mpicc >> --with-cxx=mpicxx --with-fc=mpif90 >> [0]PETSC ERROR: #1 AOApplicationToPetsc() line 267 in >> /home/gomer/local/petsc/src/vec/is/ao/interface/ao.c >> [0]PETSC ERROR: #2 MatView_MPI_DA() line 557 in >> /home/gomer/local/petsc/src/dm/impls/da/fdda.c >> [0]PETSC ERROR: #3 MatView() line 901 in >> /home/gomer/local/petsc/src/mat/interface/matrix.c >> [1]PETSC ERROR: --------------------- Error Message >> -------------------------------------------------------------- >> [1]PETSC ERROR: Invalid argument >> [1]PETSC ERROR: Wrong type of object: Parameter # 1 >> [1]PETSC ERROR: See >> http://www.mcs.anl.gov/petsc/documentation/faq.html for >> trouble shooting. >> [1]PETSC ERROR: Petsc Release Version 3.7.1, unknown >> [1]PETSC ERROR: ./urbanSCFD on a arch-linux2-c-debug named >> prometheus by gomer Fri May 27 16:29:01 2016 >> [1]PETSC ERROR: Configure options --with-cc=mpicc >> --with-cxx=mpicxx --with-fc=mpif90 >> [1]PETSC ERROR: #1 AOApplicationToPetsc() line 267 in >> /home/gomer/local/petsc/src/vec/is/ao/interface/ao.c >> [1]PETSC ERROR: #2 MatView_MPI_DA() line 557 in >> /home/gomer/local/petsc/src/dm/impls/da/fdda.c >> [1]PETSC ERROR: #3 MatView() line 901 in >> /home/gomer/local/petsc/src/mat/interface/matrix.c >> [0]PETSC ERROR: --------------------- Error Message >> -------------------------------------------------------------- >> [0]PETSC ERROR: Invalid argument >> [1]PETSC ERROR: --------------------- Error Message >> -------------------------------------------------------------- >> [1]PETSC ERROR: Invalid argument >> [1]PETSC ERROR: Wrong type of object: Parameter # 1 >> [1]PETSC ERROR: See >> http://www.mcs.anl.gov/petsc/documentation/faq.html for >> trouble shooting. >> [1]PETSC ERROR: Petsc Release Version 3.7.1, unknown >> [1]PETSC ERROR: ./urbanSCFD on a arch-linux2-c-debug named >> prometheus by gomer Fri May 27 16:29:01 2016 >> [1]PETSC ERROR: Configure options --with-cc=mpicc >> --with-cxx=mpicxx --with-fc=mpif90 >> [1]PETSC ERROR: #4 AOApplicationToPetsc() line 267 in >> /home/gomer/local/petsc/src/vec/is/ao/interface/ao.c >> [1]PETSC ERROR: #5 MatView_MPI_DA() line 557 in >> /home/gomer/local/petsc/src/dm/impls/da/fdda.c >> [1]PETSC ERROR: #6 MatView() line 901 in >> /home/gomer/local/petsc/src/mat/interface/matrix.c >> [0]PETSC ERROR: Wrong type of object: Parameter # 1 >> [0]PETSC ERROR: See >> http://www.mcs.anl.gov/petsc/documentation/faq.html for >> trouble shooting. >> [0]PETSC ERROR: Petsc Release Version 3.7.1, unknown >> [0]PETSC ERROR: ./urbanSCFD on a arch-linux2-c-debug named >> prometheus by gomer Fri May 27 16:29:01 2016 >> [0]PETSC ERROR: Configure options --with-cc=mpicc >> --with-cxx=mpicxx --with-fc=mpif90 >> [0]PETSC ERROR: #4 AOApplicationToPetsc() line 267 in >> /home/gomer/local/petsc/src/vec/is/ao/interface/ao.c >> [0]PETSC ERROR: #5 MatView_MPI_DA() line 557 in >> /home/gomer/local/petsc/src/dm/impls/da/fdda.c >> [0]PETSC ERROR: #6 MatView() line 901 in >> /home/gomer/local/petsc/src/mat/interface/matrix.c >> >> >> >> >> >> -- >> What most experimenters take for granted before they begin their >> experiments is infinitely more interesting than any results to >> which their experiments lead. >> -- Norbert Wiener > > > > > -- > What most experimenters take for granted before they begin their > experiments is infinitely more interesting than any results to which > their experiments lead. > -- Norbert Wiener -------------- next part -------------- An HTML attachment was scrubbed... URL: From gomer at stanford.edu Fri Jun 3 10:23:31 2016 From: gomer at stanford.edu (Paul Urbanczyk) Date: Fri, 3 Jun 2016 08:23:31 -0700 Subject: [petsc-users] TSSetExactFinalTime Behavior Without TSAdapt Message-ID: <7b409e70-60fa-a1f2-6dd1-052fdcbb8601@stanford.edu> Hello, I recently upgraded to the latest version of PETSc (3.7.1) from the git repository. Running my code gave me an error message about TSSolve being in the wrong state and needing to call TSSetExactFinalTime. I added this function call with TS_EXACTFINALTIME_STEPOVER, but when I re-ran my code, I got a seg fault and error messages pointing to TSAdaptChoose. After fiddling around for a while, I found that I now needed to explicitly set the time step adaptation through TSAdaptSetType. Can anyone confirm that this is so? If so, it might be helpful to note that in documentation or error messages somewhere. Thanks, Paul From bsmith at mcs.anl.gov Fri Jun 3 10:53:51 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Fri, 3 Jun 2016 10:53:51 -0500 Subject: [petsc-users] Error with MatView on multiple processors In-Reply-To: <13471917-f86e-dffb-4c8d-41af2a4f4779@stanford.edu> References: <95704256-96f8-e5e3-1d60-1af39c209fea@stanford.edu> <13471917-f86e-dffb-4c8d-41af2a4f4779@stanford.edu> Message-ID: > On Jun 3, 2016, at 10:13 AM, Paul Urbanczyk wrote: > > For the benefit of anyone else who happens to run into this issue... > > Earlier in my code, I had used the function DMDAGetAO(DM da, AO *ao), and then destroyed the AO at the end of the function with AODestroy. > > I'm guessing that, when I did this, I destroyed the AO for the DM, so when it came time to view the matrix, PETSc could not convert the numbering for display. > > Does this sound right or make sense? Yes. For PETSc "Get" operations there is sometimes a corresponding "Restore" operation and sometimes not but one should never Destroy() an object obtained with Get (unless one increased the reference count on the object themselves) because it will cause a hanging reference that can cause a crash later. I'll check the manual page for DMDAGetAO to make sure it indicates this. Barry > Thanks, > Paul > > On 05/27/2016 06:43 PM, Matthew Knepley wrote: >> On Fri, May 27, 2016 at 8:38 PM, Paul Urbanczyk wrote: >> On 05/27/2016 05:44 PM, Matthew Knepley wrote: >>> On Fri, May 27, 2016 at 6:34 PM, Paul Urbanczyk wrote: >>> Hello, >>> >>> I'm having trouble with the MatView function drawing the matrix structure(s) when I execute my code on multiple processors. >>> >>> When I run on a single processor, the code runs fine, and the graphics window displays cleanly. >>> >>> Lets start with an example. I do this >>> >>> cd $PETSC_DIR/src/snes/examples/tutorials >>> make ex19 >>> >>> Make sure it runs >>> >>> ./ex19 -snes_monitor >>> >>> Make sure it runs in parallel (maybe you need $PETSC_DIR/$PETSC_ARCH/bin/mpiexec) >>> >>> mpiexec -n 2 ./ex19 -snes_monitor >>> >>> Make sure it can draw >>> >>> mpiexec -n 2 ./ex19 -snes_monitor -mat_view draw -draw_pause 1 >>> >>> This runs fine for me. Can you try it? >>> >>> Thanks, >>> >>> Matt >> Hello Matt, >> >> Yes, this example seems to run just fine. How should I proceed? >> >> I am not sure what you are doing in your code. Can you try and change one of these examples >> to do something like what you do? SNEX ex19 seems like it does things mostly the way you >> describe. >> >> Matt >> >> >> -Paul >>> >>> When I run with multiple processors, I get error messages (see below). >>> >>> The matrices are constructed with DMCreateMatrix(da, &A_matrix). >>> >>> I then set the values with MatSetValuesStencil(A_matrix,1,&row,2,col_A,value_A,INSERT_VALUES). >>> >>> Finally, I call MatAssemblyBegin(A_matrix,MAT_FINAL_ASSEMBLY) and MatAssemblyEnd(A_matrix,MAT_FINAL_ASSEMBLY). >>> >>> I also test that the matrices are assembled with MatAssembled(A_matrix, &is_assembled_bool), and it appears they are successfully assembled. >>> >>> Any help/advice is greatly appreciated. >>> >>> Thanks in advance! >>> >>> -Paul Urbanczyk >>> >>> [0]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- >>> [0]PETSC ERROR: Invalid argument >>> [0]PETSC ERROR: Wrong type of object: Parameter # 1 >>> [0]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. >>> [0]PETSC ERROR: Petsc Release Version 3.7.1, unknown >>> [0]PETSC ERROR: ./urbanSCFD on a arch-linux2-c-debug named prometheus by gomer Fri May 27 16:29:01 2016 >>> [0]PETSC ERROR: Configure options --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 >>> [0]PETSC ERROR: #1 AOApplicationToPetsc() line 267 in /home/gomer/local/petsc/src/vec/is/ao/interface/ao.c >>> [0]PETSC ERROR: #2 MatView_MPI_DA() line 557 in /home/gomer/local/petsc/src/dm/impls/da/fdda.c >>> [0]PETSC ERROR: #3 MatView() line 901 in /home/gomer/local/petsc/src/mat/interface/matrix.c >>> [1]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- >>> [1]PETSC ERROR: Invalid argument >>> [1]PETSC ERROR: Wrong type of object: Parameter # 1 >>> [1]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. >>> [1]PETSC ERROR: Petsc Release Version 3.7.1, unknown >>> [1]PETSC ERROR: ./urbanSCFD on a arch-linux2-c-debug named prometheus by gomer Fri May 27 16:29:01 2016 >>> [1]PETSC ERROR: Configure options --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 >>> [1]PETSC ERROR: #1 AOApplicationToPetsc() line 267 in /home/gomer/local/petsc/src/vec/is/ao/interface/ao.c >>> [1]PETSC ERROR: #2 MatView_MPI_DA() line 557 in /home/gomer/local/petsc/src/dm/impls/da/fdda.c >>> [1]PETSC ERROR: #3 MatView() line 901 in /home/gomer/local/petsc/src/mat/interface/matrix.c >>> [0]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- >>> [0]PETSC ERROR: Invalid argument >>> [1]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- >>> [1]PETSC ERROR: Invalid argument >>> [1]PETSC ERROR: Wrong type of object: Parameter # 1 >>> [1]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. >>> [1]PETSC ERROR: Petsc Release Version 3.7.1, unknown >>> [1]PETSC ERROR: ./urbanSCFD on a arch-linux2-c-debug named prometheus by gomer Fri May 27 16:29:01 2016 >>> [1]PETSC ERROR: Configure options --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 >>> [1]PETSC ERROR: #4 AOApplicationToPetsc() line 267 in /home/gomer/local/petsc/src/vec/is/ao/interface/ao.c >>> [1]PETSC ERROR: #5 MatView_MPI_DA() line 557 in /home/gomer/local/petsc/src/dm/impls/da/fdda.c >>> [1]PETSC ERROR: #6 MatView() line 901 in /home/gomer/local/petsc/src/mat/interface/matrix.c >>> [0]PETSC ERROR: Wrong type of object: Parameter # 1 >>> [0]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. >>> [0]PETSC ERROR: Petsc Release Version 3.7.1, unknown >>> [0]PETSC ERROR: ./urbanSCFD on a arch-linux2-c-debug named prometheus by gomer Fri May 27 16:29:01 2016 >>> [0]PETSC ERROR: Configure options --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 >>> [0]PETSC ERROR: #4 AOApplicationToPetsc() line 267 in /home/gomer/local/petsc/src/vec/is/ao/interface/ao.c >>> [0]PETSC ERROR: #5 MatView_MPI_DA() line 557 in /home/gomer/local/petsc/src/dm/impls/da/fdda.c >>> [0]PETSC ERROR: #6 MatView() line 901 in /home/gomer/local/petsc/src/mat/interface/matrix.c >>> >>> >>> >>> >>> >>> -- >>> What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead. >>> -- Norbert Wiener >> >> >> >> >> -- >> What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead. >> -- Norbert Wiener > From zonexo at gmail.com Sun Jun 5 02:20:26 2016 From: zonexo at gmail.com (TAY wee-beng) Date: Sun, 5 Jun 2016 15:20:26 +0800 Subject: [petsc-users] Fwd: Re: Error with PETSc on K computer In-Reply-To: References: <7423eeed-4b95-28e7-c55d-08e515911935@gmail.com> <3436e085-071a-db3f-3438-84e2536af2d5@gmail.com> Message-ID: <8954e515-8f66-3e4e-552f-bf2b7be5de59@gmail.com> Hi, It gives the same problem. Any other solution? Thank you. Yours sincerely, TAY wee-beng On 3/6/2016 10:33 PM, Satish Balay wrote: > Sorry - I'm not sure whats hapenning with this compiler. > > [for a build without the patch I sent ] - can you edit > PETSC_ARCH/include/petscconf.h and remove the lines > > #ifndef PETSC_HAVE_F90_2PTR_ARG > #define PETSC_HAVE_F90_2PTR_ARG 1 > #endif > > And then build the libraries [do not run configure again]. > > Does this make a difference for this example? > > Satish > > On Fri, 3 Jun 2016, TAY wee-beng wrote: > >> Hi, >> >> Is there any update to the issue below? >> >> No hurry, just to make sure that the email is sent successfully. >> >> >> Thanks >> >> >> >> -------- Forwarded Message -------- >> Subject: Re: [petsc-users] Error with PETSc on K computer >> Date: Thu, 2 Jun 2016 10:25:22 +0800 >> From: TAY wee-beng >> To: petsc-users >> >> >> >> Hi Satish, >> >> The X9 option is : >> >> Provides a different interpretation under Fortran 95 specifications >> for any parts not conforming to the language specifications of this >> compiler >> >> I just patched and re-compiled but it still can't work. I've attached the >> configure.log for both builds. >> >> FYI, some parts of the PETSc 3.6.3 code were initially patch to make it work >> with the K computer system: >> >> $ diff -u petsc-3.6.3/config/BuildSystem/config/package.py.org >> petsc-3.6.3/config/BuildSystem/config/package.py >> --- petsc-3.6.3/config/BuildSystem/config/package.py.org 2015-12-04 >> 14:06:42.000000000 +0900 >> +++ petsc-3.6.3/config/BuildSystem/config/package.py 2016-01-22 >> 11:09:37.000000000 +0900 >> @@ -174,7 +174,7 @@ >> return '' >> >> def getSharedFlag(self,cflags): >> - for flag in ['-PIC', '-fPIC', '-KPIC', '-qpic']: >> + for flag in ['-KPIC', '-fPIC', '-PIC', '-qpic']: >> if cflags.find(flag) >=0: return flag >> return '' >> >> $ diff -u petsc-3.6.3/config/BuildSystem/config/setCompilers.py.org >> petsc-3.6.3/config/BuildSystem/config/setCompilers.py >> --- petsc-3.6.3/config/BuildSystem/config/setCompilers.py.org 2015-07-23 >> 00:22:46.000000000 +0900 >> +++ petsc-3.6.3/config/BuildSystem/config/setCompilers.py 2016-01-22 >> 11:10:05.000000000 +0900 >> @@ -1017,7 +1017,7 @@ >> self.pushLanguage(language) >> #different compilers are sensitive to the order of testing these >> flags. So separete out GCC test. >> if config.setCompilers.Configure.isGNU(self.getCompiler()): testFlags = >> ['-fPIC'] >> - else: testFlags = ['-PIC', '-fPIC', '-KPIC','-qpic'] >> + else: testFlags = ['-KPIC', '-fPIC', '-PIC','-qpic'] >> for testFlag in testFlags: >> try: >> self.logPrint('Trying '+language+' compiler flag '+testFlag) >> $ diff -u petsc-3.6.3/config/BuildSystem/config/packages/openmp.py.org >> petsc-3.6.3/config/BuildSystem/config/packages/openmp.py >> --- petsc-3.6.3/config/BuildSystem/config/packages/openmp.py.org 2016-01-25 >> 15:42:23.000000000+0900 >> +++ petsc-3.6.3/config/BuildSystem/config/packages/openmp.py 2016-01-22 >> 17:13:52.000000000 +0900 >> @@ -19,7 +19,8 @@ >> self.found = 0 >> self.setCompilers.pushLanguage('C') >> # >> - for flag in ["-fopenmp", # Gnu >> + for flag in ["-Kopenmp", # Fujitsu >> + "-fopenmp", # Gnu >> "-qsmp=omp",# IBM XL C/C++ >> "-h omp", # Cray. Must come after XL because XL >> interprets this option as meaning"-soname omp" >> "-mp", # Portland Group >> >> $ diff -u ./petsc-3.6.3/config/BuildSystem/config/compilers.py.org >> ./petsc-3.6.3/config/BuildSystem/config/compilers.py >> --- ./petsc-3.6.3/config/BuildSystem/config/compilers.py.org 2015-06-10 >> 06:24:49.000000000 +0900 >> +++ ./petsc-3.6.3/config/BuildSystem/config/compilers.py 2016-02-19 >> 11:56:12.000000000 +0900 >> @@ -164,7 +164,7 @@ >> def checkCLibraries(self): >> '''Determines the libraries needed to link with C''' >> oldFlags = self.setCompilers.LDFLAGS >> - self.setCompilers.LDFLAGS += ' -v' >> + self.setCompilers.LDFLAGS += ' -###' >> self.pushLanguage('C') >> (output, returnCode) = self.outputLink('', '') >> self.setCompilers.LDFLAGS = oldFlags >> @@ -413,7 +413,7 @@ >> def checkCxxLibraries(self): >> '''Determines the libraries needed to link with C++''' >> oldFlags = self.setCompilers.LDFLAGS >> - self.setCompilers.LDFLAGS += ' -v' >> + self.setCompilers.LDFLAGS += ' -###' >> self.pushLanguage('Cxx') >> (output, returnCode) = self.outputLink('', '') >> self.setCompilers.LDFLAGS = oldFlags >> >> >> >> Thank you >> >> Yours sincerely, >> >> TAY wee-beng >> >> On 2/6/2016 3:18 AM, Satish Balay wrote: >>> What does -X9 in --FFLAGS="-X9 -O0" do? >>> >>> can you send configure.log for this build? >>> >>> And does the attached patch make a difference with this example? >>> [suggest doing a separate temporary build of PETSc - in a different source >>> location - to check this.] >>> >>> Satish >>> >>> On Wed, 1 Jun 2016, TAY wee-beng wrote: >>> >>>> Hi Satish, >>>> >>>> Only partially working: >>>> >>>> [t00196 at b04-036 tutorials]$ mpiexec -n 2 ./ex4f90 >>>> jwe1050i-w The hardware barrier couldn't be used and continues processing >>>> using the software barrier. >>>> taken to (standard) corrective action, execution continuing. >>>> jwe1050i-w The hardware barrier couldn't be used and continues processing >>>> using the software barrier. >>>> taken to (standard) corrective action, execution continuing. >>>> Vec Object:Vec Object:initial vector:initial vector: 1 MPI processes >>>> type: seq >>>> 10 >>>> 20 >>>> 30 >>>> 40 >>>> 50 >>>> 60 >>>> 1 MPI processes >>>> type: seq >>>> 10 >>>> 20 >>>> 30 >>>> 40 >>>> 50 >>>> 60 >>>> [1]PETSC ERROR: >>>> ------------------------------------------------------------------------ >>>> [1]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, >>>> probably >>>> memory access out of range >>>> [1]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger >>>> [1]PETSC ERROR: or see >>>> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind >>>> [1]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple Mac OS X >>>> to >>>> find memory corruption errors >>>> [1]PETSC ERROR: likely location of problem given in stack below >>>> [1]PETSC ERROR: --------------------- Stack Frames >>>> ------------------------------------ >>>> [1]PETSC ERROR: Note: The EXACT line numbers in the stack are not >>>> available, >>>> [1]PETSC ERROR: INSTEAD the line number of the start of the function >>>> [1]PETSC ERROR: is given. >>>> [1]PETSC ERROR: [1] F90Array1dCreate line 50 >>>> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c >>>> [1]PETSC ERROR: --------------------- Error Message >>>> ------------------------------------------[0]PETSC ERROR: >>>> ------------------------------------------------------------------------ >>>> [0]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, >>>> probably >>>> memory access out of range >>>> [0]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger >>>> [0]PETSC ERROR: or see >>>> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind >>>> [0]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple Mac OS X >>>> to >>>> find memory corruption errors >>>> [0]PETSC ERROR: likely location of problem given in stack below >>>> [0]PETSC ERROR: --------------------- Stack Frames >>>> ------------------------------------ >>>> [0]PETSC ERROR: Note: The EXACT line numbers in the stack are not >>>> available, >>>> [0]PETSC ERROR: INSTEAD the line number of the start of the function >>>> [0]PETSC ERROR: is given. >>>> [0]PETSC ERROR: [0] F90Array1dCreate line 50 >>>> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c >>>> [0]PETSC ERROR: --------------------- Error Message >>>> -------------------------------------------------------------- >>>> [1]PETSC ERROR: Signal received >>>> [1]PETSC ERROR: Seehttp://www.mcs.anl.gov/petsc/documentation/faq.html >>>> for >>>> trouble shooting. >>>> [1]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015 >>>> [1]PETSC ERROR: ./ex4f90 on a petsc-3.6.3_debug named b04-036 by Unknown >>>> Wed >>>> Jun 1 13:23:41 2016 >>>> [1]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC >>>> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" >>>> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" >>>> --LD_SHARED= >>>> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >>>> --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 >>>> --with-scalapack-lib=-SCALAPACK >>>> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >>>> --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 >>>> --with-hypre=1 >>>> --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4 >>>> [1]PETSC ERROR: #1 User provided function() line 0 in unknown file >>>> -------------------------------------------------------------------------- >>>> [mpi::mpi-api::mpi-abort] >>>> MPI_ABORT was invoked on rank 1 in communicator MPI_COMM_WORLD >>>> with errorcode 59. >>>> >>>> NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes. >>>> You may or may not see output from other processes, depending on >>>> exactly when Open MPI kills them. >>>> -------------------------------------------------------------------------- >>>> [b04-036:28998] >>>> /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_errmgr_base_error_abort+0x84) >>>> [0xffffffff11360404] >>>> [b04-036:28998] >>>> /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(ompi_mpi_abort+0x51c) >>>> [0xffffffff1110391c] >>>> [b04-036:28998] >>>> /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(MPI_Abort+0x6c) >>>> [0xffffffff1111b5ec] >>>> [b04-036:28998] >>>> /opt/FJSVtclang/GM-1.2.0-20/lib64/libtrtmet_c.so.1(MPI_Abort+0x2c) >>>> [0xffffffff00281bf0] >>>> [b04-036:28998] ./ex4f90 [0x292548] >>>> [b04-036:28998] ./ex4f90 [0x29165c] >>>> [b04-036:28998] >>>> /opt/FJSVxosmmm/lib64/libmpgpthread.so.1(_IO_funlockfile+0x5c) >>>> [0xffffffff121e1974] >>>> [b04-036:28998] ./ex4f90 [0x9f6748] >>>> [b04-036:28998] ./ex4f90 [0x9f0ea4] >>>> [b04-036:28998] ./ex4f90 [0x2c76a0] >>>> [b04-036:28998] ./ex4f90(MAIN__+0x38c) [0x10688c] >>>> [b04-036:28998] ./ex4f90(main+0xec) [0x268e91c] >>>> [b04-036:28998] /lib64/libc.so.6(__libc_start_main+0x194) >>>> [0xffffffff138cb81c] >>>> [b04-036:28998] ./ex4f90 [0x1063ac] >>>> [1]PETSC ERROR: >>>> ------------------------------------------------------------------------ >>>> [1]PETSC ERROR: Caught signal number 15 Terminate: Some process (or the >>>> batch >>>> system) has told this process to end >>>> [1]PETSC ERROR: Tr-------------------- >>>> [0]PETSC ERROR: Signal received >>>> [0]PETSC ERROR: Seehttp://www.mcs.anl.gov/petsc/documentation/faq.html >>>> for >>>> trouble shooting. >>>> [0]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015 >>>> [0]PETSC ERROR: ./ex4f90 on a petsc-3.6.3_debug named b04-036 by Unknown >>>> Wed >>>> Jun 1 13:23:41 2016 >>>> [0]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC >>>> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" >>>> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" >>>> --LD_SHARED= >>>> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >>>> --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 >>>> --with-scalapack-lib=-SCALAPACK >>>> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >>>> --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 >>>> --with-hypre=1 >>>> --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4 >>>> [0]PETSC ERROR: #1 User provided function() line 0 in unknown file >>>> -------------------------------------------------------------------------- >>>> [mpi::mpi-api::mpi-abort] >>>> MPI_ABORT was invoked on rank 0 in communicator MPI_COMM_WORLD >>>> with errorcode 59. >>>> >>>> NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes. >>>> You may or may not see output from other processes, depending on >>>> exactly when Open MPI kills them. >>>> -------------------------------------------------------------------------- >>>> [b04-036:28997] >>>> /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_errmgr_base_error_abort+0x84) >>>> [0xffffffff11360404] >>>> [b04-036:28997] >>>> /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(ompi_mpi_abort+0x51c) >>>> [0xffffffff1110391c] >>>> [b04-036:28997] >>>> /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(MPI_Abort+0x6c) >>>> [0xffffffff1111b5ec] >>>> [b04-036:28997] >>>> /opt/FJSVtclang/GM-1.2.0-20/lib64/libtrtmet_c.so.1(MPI_Abort+0x2c) >>>> [0xffffffff00281bf0] >>>> [b04-036:28997] ./ex4f90 [0x292548] >>>> [b04-036:28997] ./ex4f90 [0x29165c] >>>> [b04-036:28997] >>>> /opt/FJSVxosmmm/lib64/libmpgpthread.so.1(_IO_funlockfile+0x5c) >>>> [0xffffffff121e1974] >>>> [b04-036:28997] ./ex4f90 [0x9f6748] >>>> [b04-036:28997] ./ex4f90 [0x9f0ea4] >>>> [b04-036:28997] ./ex4f90 [0x2c76a0] >>>> [b04-036:28997] ./ex4f90(MAIN__+0x38c) [0x10688c] >>>> [b04-036:28997] ./ex4f90(main+0xec) [0x268e91c] >>>> [b04-036:28997] /lib64/libc.so.6(__libc_start_main+0x194) >>>> [0xffffffff138cb81c] >>>> [b04-036:28997] ./ex4f90 [0x1063ac] >>>> [0]PETSC ERROR: >>>> ------------------------------------------------------------------------ >>>> [0]PETSC ERROR: Caught signal number 15 Terminate: Some process (or the >>>> batch >>>> system) has told this process to end >>>> [0]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger >>>> [0]PETSC ERROR: or see >>>> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind >>>> [0]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple Mac OS X >>>> to >>>> find memory corruption errors >>>> [0]PETSC ERROR: likely location of problem given in stack below >>>> [0]PETSC ERROR: --------------------- Stack Frames >>>> ------------------------------------ >>>> [0]PETSC ERROR: Note: The EXACT line numbers in the stack are not >>>> available, >>>> [0]PETSC ERROR: INSTEAD the line number of the start of the function >>>> [0]PETSC ERROR: is given. >>>> [0]PETSC ERROR: [0] F90Array1dCreate line 50 >>>> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c >>>> [0]PETSC ERROR: --------------------- Error Message >>>> -------------------------------------------------------------- >>>> [0]PETSC ERROR: Signal received >>>> [0]PETSC ERROR: Seehttp://www.mcs.anl.gov/petsc/documentation/faq.html >>>> for >>>> trouble shooting. >>>> [0]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015 >>>> [0]PETSC ERROR: ./ex4f90 on a petsc-3.6.3_debug named b04-036 by Unknown >>>> Wed >>>> Jun 1 13:23:41 2016 >>>> [0]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC >>>> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" >>>> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" >>>> --LD_SHARED= >>>> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >>>> --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 >>>> --with-scalapack-lib=-SCALAPACK >>>> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >>>> --with-fortran-interfaces=1 --with-debuy option -start_in_debugger or >>>> -on_error_attach_debugger >>>> [1]PETSC ERROR: or see >>>> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind >>>> [1]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple Mac OS X >>>> to >>>> find memory corruption errors >>>> [1]PETSC ERROR: likely location of problem given in stack below >>>> [1]PETSC ERROR: --------------------- Stack Frames >>>> ------------------------------------ >>>> [1]PETSC ERROR: Note: The EXACT line numbers in the stack are not >>>> available, >>>> [1]PETSC ERROR: INSTEAD the line number of the start of the function >>>> [1]PETSC ERROR: is given. >>>> [1]PETSC ERROR: [1] F90Array1dCreate line 50 >>>> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c >>>> [1]PETSC ERROR: --------------------- Error Message >>>> -------------------------------------------------------------- >>>> [1]PETSC ERROR: Signal received >>>> [1]PETSC ERROR: Seehttp://www.mcs.anl.gov/petsc/documentation/faq.html >>>> for >>>> trouble shooting. >>>> [1]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015 >>>> [1]PETSC ERROR: ./ex4f90 on a petsc-3.6.3_debug named b04-036 by Unknown >>>> Wed >>>> Jun 1 13:23:41 2016 >>>> [1]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC >>>> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" >>>> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" >>>> --LD_SHARED= >>>> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >>>> --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 >>>> --with-scalapack-lib=-SCALAPACK >>>> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >>>> --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 >>>> --with-hypre=1 >>>> --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4 >>>> [1]PETSC ERROR: #2 User provided function() line 0 in unknown file >>>> gging=1 --useThreads=0 --with-hypre=1 >>>> --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4 >>>> [0]PETSC ERROR: #2 User provided function() line 0 in unknown file >>>> [ERR.] PLE 0019 plexec One of MPI processes was >>>> aborted.(rank=0)(nid=0x04180034)(CODE=1938,793745140674134016,15104) >>>> [t00196 at b04-036 tutorials]$ >>>> [ERR.] PLE 0021 plexec The interactive job has aborted with the >>>> signal.(sig=24) >>>> [INFO] PJM 0083 pjsub Interactive job 5211401 completed. >>>> >>>> Thank you >>>> >>>> Yours sincerely, >>>> >>>> TAY wee-beng >>>> >>>> On 1/6/2016 12:21 PM, Satish Balay wrote: >>>>> Do PETSc examples using VecGetArrayF90() work? >>>>> >>>>> say src/vec/vec/examples/tutorials/ex4f90.F >>>>> >>>>> Satish >>>>> >>>>> On Tue, 31 May 2016, TAY wee-beng wrote: >>>>> >>>>>> Hi, >>>>>> >>>>>> I'm trying to run my MPI CFD code on Japan's K computer. My code can >>>>>> run >>>>>> if I >>>>>> didn't make use of the PETSc DMDAVecGetArrayF90 subroutine. If it's >>>>>> called >>>>>> >>>>>> call DMDAVecGetArrayF90(da_u,u_local,u_array,ierr) >>>>>> >>>>>> I get the error below. I have no problem with my code on other >>>>>> clusters >>>>>> using >>>>>> the new Intel compilers. I used to have problems with DM when using >>>>>> the >>>>>> old >>>>>> Intel compilers. Now on the K computer, I'm using Fujitsu's Fortran >>>>>> compiler. >>>>>> How can I troubleshoot? >>>>>> >>>>>> Btw, I also tested on the ex13f90 example and it didn't work too. The >>>>>> error is >>>>>> below. >>>>>> >>>>>> >>>>>> My code error: >>>>>> >>>>>> /* size_x,size_y,size_z 76x130x136*//* >>>>>> *//* total grid size = 1343680*//* >>>>>> *//* recommended cores (50k / core) = 26.87360000000000*//* >>>>>> *//* 0*//* >>>>>> *//* 1*//* >>>>>> *//* 1*//* >>>>>> *//*[3]PETSC ERROR: [1]PETSC ERROR: >>>>>> ------------------------------------------------------------------------*//* >>>>>> *//*[1]PETSC ERROR: Caught signal number 11 SEGV: Segmentation >>>>>> Violation, >>>>>> probably memory access out of range*//* >>>>>> *//*[1]PETSC ERROR: Try option -start_in_debugger or >>>>>> -on_error_attach_debugger*//* >>>>>> *//*[1]PETSC ERROR: or see >>>>>> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* >>>>>> *//*[1]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple >>>>>> Mac >>>>>> OS X >>>>>> to find memory corruption errors*//* >>>>>> *//*[1]PETSC ERROR: likely location of problem given in stack >>>>>> below*//* >>>>>> *//*[1]PETSC ERROR: --------------------- Stack Frames >>>>>> ------------------------------------*//* >>>>>> *//*[1]PETSC ERROR: Note: The EXACT line numbers in the stack are not >>>>>> available,*//* >>>>>> *//*[1]PETSC ERROR: INSTEAD the line number of the start of the >>>>>> function*//* >>>>>> *//*[1]PETSC ERROR: is given.*//* >>>>>> *//*[1]PETSC ERROR: [1] F90Array3dCreate line 244 >>>>>> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* >>>>>> *//* 1*//* >>>>>> *//*------------------------------------------------------------------------*//* >>>>>> *//*[3]PETSC ERROR: Caught signal number 11 SEGV: Segmentation >>>>>> Violation, >>>>>> probably memory access out of range*//* >>>>>> *//*[3]PETSC ERROR: Try option -start_in_debugger or >>>>>> -on_error_attach_debugger*//* >>>>>> *//*[3]PETSC ERROR: or see >>>>>> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* >>>>>> *//*[3]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple >>>>>> Mac >>>>>> OS X >>>>>> to find memory corruption errors*//* >>>>>> *//*[3]PETSC ERROR: likely location of problem given in stack >>>>>> below*//* >>>>>> *//*[3]PETSC ERROR: --------------------- Stack Frames >>>>>> ------------------------------------*//* >>>>>> *//*[0]PETSC ERROR: >>>>>> ------------------------------------------------------------------------*//* >>>>>> *//*[0]PETSC ERROR: Caught signal number 11 SEGV: Segmentation >>>>>> Violation, >>>>>> probably memory access out of range*//* >>>>>> *//*[0]PETSC ERROR: Try option -start_in_debugger or >>>>>> -on_error_attach_debugger*//* >>>>>> *//*[0]PETSC ERROR: or see >>>>>> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* >>>>>> *//*[0]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple >>>>>> Mac >>>>>> OS X >>>>>> to find memory corruption errors*//* >>>>>> *//*[0]PETSC ERROR: likely location of problem given in stack >>>>>> below*//* >>>>>> *//*[0]PETSC ERROR: --------------------- Stack Frames >>>>>> ------------------------------------*//* >>>>>> *//*[0]PETSC ERROR: Note: The EXACT line numbers in the stack are not >>>>>> available,*//* >>>>>> *//*[0]PETSC ERROR: INSTEAD the line number of the start of the >>>>>> function*//* >>>>>> *//*[0]PETSC ERROR: is given.*//* >>>>>> *//*[0]PETSC ERROR: [0] F90Array3dCreate line 244 >>>>>> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* >>>>>> *//*[0]PETSC ERROR: --------------------- Error Message >>>>>> ----------------------------------------- 1*//* >>>>>> *//*[2]PETSC ERROR: >>>>>> ------------------------------------------------------------------------*//* >>>>>> *//*[2]PETSC ERROR: Caught signal number 11 SEGV: Segmentation >>>>>> Violation, >>>>>> probably memory access out of range*//* >>>>>> *//*[2]PETSC ERROR: Try option -start_in_debugger or >>>>>> -on_error_attach_debugger*//* >>>>>> *//*[2]PETSC ERROR: or see >>>>>> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* >>>>>> *//*[2]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple >>>>>> Mac >>>>>> OS X >>>>>> to find memory corruption errors*//* >>>>>> *//*[2]PETSC ERROR: likely location of problem given in stack >>>>>> below*//* >>>>>> *//*[2]PETSC ERROR: --------------------- Stack Frames >>>>>> ------------------------------------*//* >>>>>> *//*[2]PETSC ERROR: Note: The EXACT line numbers in the stack are not >>>>>> available,*//* >>>>>> *//*[2]PETSC ERROR: INSTEAD the line number of the start of the >>>>>> function*//* >>>>>> *//*[2]PETSC ERROR: is given.*//* >>>>>> *//*[2]PETSC ERROR: [2] F90Array3dCreate line 244 >>>>>> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* >>>>>> *//*[2]PETSC ERROR: --------------------- Error Message >>>>>> -----------------------------------------[3]PETSC ERROR: Note: The >>>>>> EXACT >>>>>> line >>>>>> numbers in the stack are not available,*//* >>>>>> *//*[3]PETSC ERROR: INSTEAD the line number of the start of the >>>>>> function*//* >>>>>> *//*[3]PETSC ERROR: is given.*//* >>>>>> *//*[3]PETSC ERROR: [3] F90Array3dCreate line 244 >>>>>> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* >>>>>> *//*[3]PETSC ERROR: --------------------- Error Message >>>>>> --------------------------------------------------------------*//* >>>>>> *//*[3]PETSC ERROR: Signal received*//* >>>>>> *//*[3]PETSC ERROR: See >>>>>> http://www.mcs.anl.gov/petsc/documentation/faq.html >>>>>> for trouble shooting.*//* >>>>>> *//*[3]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015*//* >>>>>> *//*[3]PETSC ERROR: ./a-debug.out on a petsc-3.6.3_debug named b04-036 >>>>>> by >>>>>> Unknown Wed Jun 1 12:54:34 2016*//* >>>>>> *//*[3]PETSC ERROR: Configure options --with-cc=mpifcc >>>>>> --with-cxx=mpiFCC >>>>>> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg >>>>>> -O0" >>>>>> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" >>>>>> --LD_SHARED= >>>>>> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >>>>>> --with-shared----------------------*//* >>>>>> *//*[0]PETSC ERROR: Signal received*//* >>>>>> *//*[0]PETSC ERROR: See >>>>>> http://www.mcs.anl.gov/petsc/documentation/faq.html >>>>>> for trouble shooting.*//* >>>>>> *//*[0]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015*//* >>>>>> *//*[0]PETSC ERROR: ./a-debug.out on a petsc-3.6.3_debug named b04-036 >>>>>> by >>>>>> Unknown Wed Jun 1 12:54:34 2016*//* >>>>>> *//*[0]PETSC ERROR: Configure options --with-cc=mpifcc >>>>>> --with-cxx=mpiFCC >>>>>> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg >>>>>> -O0" >>>>>> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" >>>>>> --LD_SHARED= >>>>>> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >>>>>> --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 >>>>>> --with-scalapack-lib=-SCALAPACK >>>>>> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >>>>>> --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 >>>>>> --with-hypre=1 >>>>>> --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4*//* >>>>>> *//*[0]PETSC ERROR: #1 User provided function() line 0 in unknown >>>>>> file*//* >>>>>> *//*--------------------------------------------------------------------------*//* >>>>>> *//*[m---------------------*//* >>>>>> *//*[2]PETSC ERROR: Signal received*//* >>>>>> *//*[2]PETSC ERROR: See >>>>>> http://www.mcs.anl.gov/petsc/documentation/faq.html >>>>>> for trouble shooting.*//* >>>>>> *//*[2]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015*//* >>>>>> *//*[2]PETSC ERROR: ./a-debug.out on a petsc-3.6.3_debug named b04-036 >>>>>> by >>>>>> Unknown Wed Jun 1 12:54:34 2016*//* >>>>>> *//*[2]PETSC ERROR: Configure options --with-cc=mpifcc >>>>>> --with-cxx=mpiFCC >>>>>> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg >>>>>> -O0" >>>>>> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" >>>>>> --LD_SHARED= >>>>>> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >>>>>> --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 >>>>>> --with-scalapack-lib=-SCALAPACK >>>>>> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >>>>>> --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 >>>>>> --with-hypre=1 >>>>>> --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4*//* >>>>>> *//*[2]PETSC ERROR: #1 User provided function() line 0 in unknown >>>>>> file*//* >>>>>> *//*--------------------------------------------------------------------------*//* >>>>>> *//*[m[1]PETSC ERROR: --------------------- Error Message >>>>>> --------------------------------------------------------------*//* >>>>>> *//*[1]PETSC ERROR: Signal received*//* >>>>>> *//*[1]PETSC ERROR: See >>>>>> http://www.mcs.anl.gov/petsc/documentation/faq.html >>>>>> for trouble shooting.*//* >>>>>> *//*[1]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015*//* >>>>>> *//*[1]PETSC ERROR: ./a-debug.out on a petsc-3.6.3_debug named b04-036 >>>>>> by >>>>>> Unknown Wed Jun 1 12:54:34 2016*//* >>>>>> *//*[1]PETSC ERROR: Configure options --with-cc=mpifcc >>>>>> --with-cxx=mpiFCC >>>>>> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg >>>>>> -O0" >>>>>> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" >>>>>> --LD_SHARED= >>>>>> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >>>>>> --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 >>>>>> --with-scalapack-lib=-SCALAPACK >>>>>> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >>>>>> --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 >>>>>> --with-hypre=1 >>>>>> --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4*//* >>>>>> *//*[1]PETSC ERROR: #1 User provided function() line 0 ilibraries=0 >>>>>> --with-blas-lapack-lib=-SSL2 --with-scalapack-lib=-SCALAPACK >>>>>> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >>>>>> --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 >>>>>> --with-hypre=1 >>>>>> --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4*//* >>>>>> *//*[3]PETSC ERROR: #1 User provided function() line 0 in unknown >>>>>> file*//* >>>>>> *//*--------------------------------------------------------------------------*//* >>>>>> *//*[mpi::mpi-api::mpi-abort]*//* >>>>>> *//*MPI_ABORT was invoked on rank 3 in communicator MPI_COMM_WORLD*//* >>>>>> *//*with errorcode 59.*//* >>>>>> *//* >>>>>> *//*NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI >>>>>> processes.*//* >>>>>> *//*You may or may not see output from other processes, depending >>>>>> on*//* >>>>>> *//*exactly when Open MPI kills them.*//* >>>>>> *//*--------------------------------------------------------------------------*//* >>>>>> *//*[b04-036:28416] >>>>>> /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_errmgr_base_error_abort+0x84) >>>>>> [0xffffffff11360404]*//* >>>>>> *//*[b04-036:28416] >>>>>> /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(ompi_mpi_abort+0x51c) >>>>>> [0xffffffff1110391c]*//* >>>>>> *//*[b04-036:28416] >>>>>> /opt/FJSVtclang/GM-1.2.0-2pi::mpi-api::mpi-abort]*//* >>>>>> *//*MPI_ABORT was invoked on rank 2 in communicator MPI_COMM_WORLD*//* >>>>>> *//*with errorcode 59.*/ >>>>>> >>>>>> ex13f90 error: >>>>>> >>>>>> >>>>>> /*[t00196 at b04-036 tutorials]$ mpiexec -np 2 ./ex13f90*//* >>>>>> *//*jwe1050i-w The hardware barrier couldn't be used and continues >>>>>> processing >>>>>> using the software barrier.*//* >>>>>> *//*taken to (standard) corrective action, execution continuing.*//* >>>>>> *//*jwe1050i-w The hardware barrier couldn't be used and continues >>>>>> processing >>>>>> using the software barrier.*//* >>>>>> *//*taken to (standard) corrective action, execution continuing.*//* >>>>>> *//* Hi! We're solving van der Pol using 2 processes.*//* >>>>>> *//* >>>>>> *//* t x1 x2*//* >>>>>> *//*[1]PETSC ERROR: >>>>>> ------------------------------------------------------------------------*//* >>>>>> *//*[1]PETSC ERROR: Caught signal number 10 BUS: Bus Error, possibly >>>>>> illegal >>>>>> memory access*//* >>>>>> *//*[1]PETSC ERROR: Try option -start_in_debugger or >>>>>> -on_error_attach_debugger*//* >>>>>> *//*[0]PETSC ERROR: >>>>>> ------------------------------------------------------------------------*//* >>>>>> *//*[0]PETSC ERROR: Caught signal number 10 BUS: Bus Error, possibly >>>>>> illegal >>>>>> memory access*//* >>>>>> *//*[0]PETSC ERROR: Try option -start_in_debugger or >>>>>> -on_error_attach_debugger*//* >>>>>> *//*[0]PETSC ERROR: or see >>>>>> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* >>>>>> *//*[0]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple >>>>>> Mac >>>>>> OS X >>>>>> to find memory corruption errors*//* >>>>>> *//*[1]PETSC ERROR: or see >>>>>> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* >>>>>> *//*[1]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple >>>>>> Mac >>>>>> OS X >>>>>> to find memory corruption errors*//* >>>>>> *//*[1]PETSC ERROR: likely location of problem given in stack >>>>>> below*//* >>>>>> *//*[1]PETSC ERROR: --------------------- Stack Frames >>>>>> ------------------------------------*//* >>>>>> *//*[1]PETSC ERROR: Note: The EXACT line numbers in the stack are not >>>>>> available,*//* >>>>>> *//*[1]PETSC ERROR: INSTEAD the line number of the start of the >>>>>> function*//* >>>>>> *//*[1]PETSC ERROR: is given.*//* >>>>>> *//*[1]PETSC ERROR: [1] F90Array4dCreate line 337 >>>>>> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* >>>>>> *//*[0]PETSC ERROR: likely location of problem given in stack >>>>>> below*//* >>>>>> *//*[0]PETSC ERROR: --------------------- Stack Frames >>>>>> ------------------------------------*//* >>>>>> *//*[0]PETSC ERROR: Note: The EXACT line numbers in the stack are not >>>>>> available,*//* >>>>>> *//*[0]PETSC ERROR: INSTEAD the line number of the start of the >>>>>> function*//* >>>>>> *//*[0]PETSC ERROR: is given.*//* >>>>>> *//*[0]PETSC ERROR: [0] F90Array4dCreate line 337 >>>>>> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* >>>>>> *//*[1]PETSC ERROR: --------------------- Error Message >>>>>> --------------------------------------------------------------*//* >>>>>> *//*[1]PETSC ERROR: Signal received*//* >>>>>> *//*[1]PETSC ERROR: See >>>>>> http://www.mcs.anl.gov/petsc/documentation/faq.html >>>>>> for trouble shooting.*//* >>>>>> *//*[1]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015*//* >>>>>> *//*[1]PETSC ERROR: ./ex13f90 on a petsc-3.6.3_debug named b04-036 by >>>>>> Unknown >>>>>> Wed Jun 1 13:04:34 2016*//* >>>>>> *//*[1]PETSC ERROR: Configure options --with-cc=mpifcc >>>>>> --with-cxx=mpiFCC >>>>>> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg >>>>>> -O0" >>>>>> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" >>>>>> --LD_SHARED= >>>>>> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >>>>>> --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 >>>>>> --with-scalapack-lib=-SCALAPACK >>>>>> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >>>>>> --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 >>>>>> --with-hypre=1 >>>>>> --with-hyp*//* >>>>>> */ >>>>>> >>>>>> >>>>>> >> --- This email has been checked for viruses by Avast antivirus software. https://www.avast.com/antivirus From david.knezevic at akselos.com Sun Jun 5 12:12:35 2016 From: david.knezevic at akselos.com (David Knezevic) Date: Sun, 5 Jun 2016 13:12:35 -0400 Subject: [petsc-users] MUMPS error reporting in PETSc-3.7 Message-ID: In PETSc-3.6, when I hit an error using the MUMPS solver, I would get an error like this: [0]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [0]PETSC ERROR: Error in external library [0]PETSC ERROR: Error reported by MUMPS in numerical factorization phase: INFO(1)=-9, INFO(2)=351513 In PETSc-3.7, the solver now reports "KSP_DIVERGED_PCSETUP_FAILED" instead. The new behavior is definitely better, so thanks for the update! However, I'd still be curious to be able to see what error codes MUMPS returned (which was previously provided in INFO(1) and INFO(2)), since that can be helpful for diagnosing the reason for the solver failure. Is that info still available somehow? Thanks, David -------------- next part -------------- An HTML attachment was scrubbed... URL: From bsmith at mcs.anl.gov Sun Jun 5 12:42:28 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Sun, 5 Jun 2016 12:42:28 -0500 Subject: [petsc-users] MUMPS error reporting in PETSc-3.7 In-Reply-To: References: Message-ID: > On Jun 5, 2016, at 12:12 PM, David Knezevic wrote: > > In PETSc-3.6, when I hit an error using the MUMPS solver, I would get an error like this: > > [0]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- > [0]PETSC ERROR: Error in external library > [0]PETSC ERROR: Error reported by MUMPS in numerical factorization phase: INFO(1)=-9, INFO(2)=351513 > > In PETSc-3.7, the solver now reports "KSP_DIVERGED_PCSETUP_FAILED" instead. The new behavior is definitely better, so thanks for the update! However, I'd still be curious to be able to see what error codes MUMPS returned (which was previously provided in INFO(1) and INFO(2)), since that can be helpful for diagnosing the reason for the solver failure. Is that info still available somehow? David, There are a couple of ways to obtain them both clunky, we should also provide a simple function call interface such as MatMumpsGetInfo(Mat,int *infog,int *info); Anyways right now you can run with -info and it prints the information (along with too much other information) or you can run with -ksp_error_if_not_converged and then it reverts back to the old behavior of stopping immediately and printing the error message and info values. Barry > > Thanks, > David > From david.knezevic at akselos.com Sun Jun 5 12:45:49 2016 From: david.knezevic at akselos.com (David Knezevic) Date: Sun, 5 Jun 2016 13:45:49 -0400 Subject: [petsc-users] MUMPS error reporting in PETSc-3.7 In-Reply-To: References: Message-ID: On Sun, Jun 5, 2016 at 1:42 PM, Barry Smith wrote: > > > On Jun 5, 2016, at 12:12 PM, David Knezevic > wrote: > > > > In PETSc-3.6, when I hit an error using the MUMPS solver, I would get an > error like this: > > > > [0]PETSC ERROR: --------------------- Error Message > -------------------------------------------------------------- > > [0]PETSC ERROR: Error in external library > > [0]PETSC ERROR: Error reported by MUMPS in numerical factorization > phase: INFO(1)=-9, INFO(2)=351513 > > > > In PETSc-3.7, the solver now reports "KSP_DIVERGED_PCSETUP_FAILED" > instead. The new behavior is definitely better, so thanks for the update! > However, I'd still be curious to be able to see what error codes MUMPS > returned (which was previously provided in INFO(1) and INFO(2)), since that > can be helpful for diagnosing the reason for the solver failure. Is that > info still available somehow? > > David, > > There are a couple of ways to obtain them both clunky, we should also > provide a simple function call interface such as MatMumpsGetInfo(Mat,int > *infog,int *info); > > Anyways right now you can run with -info and it prints the > information (along with too much other information) or you can run with > -ksp_error_if_not_converged and then it reverts back to the old behavior of > stopping immediately and printing the error message and info values. > OK, got it, thanks! David -------------- next part -------------- An HTML attachment was scrubbed... URL: From ncerpagi at umn.edu Sun Jun 5 19:43:17 2016 From: ncerpagi at umn.edu (Nestor Cerpa) Date: Sun, 5 Jun 2016 19:43:17 -0500 Subject: [petsc-users] Parallel assembly FEM matrix Message-ID: Hello, I am learning to use Petsc in order to modify my sequential FEM code to work in parallel. First, I am trying to understand how a FEM assembly loop would work in parallel using Petsc but I run into some problems. I made a simple example to explain the issue : - I read a simple mesh (generated by gmsh) with 4 quadrilaterls and generate the corresponding DMPlex - I define a scalar field on vertices - Vertices on Bottom and Top boundaries are contrained (so I have 3 unknowns) - I create a DM Matrix - For the purpose of my example during the assembly I define an ?elementary matrix? containing only ones When I run the program with one process I obtain what the matrix is supposed to be : Mat Object: 1 MPI processes type: seqaij row 0: (0, 2.) (2, 2.) row 1: (1, 2.) (2, 2.) row 2: (0, 2.) (1, 2.) (2, 4.) But running with two processes gives me this : Mat Object: 2 MPI processes type: mpiaij row 0: (0, 2.) (2, 0.) row 1: (1, 2.) (2, 2.) row 2: (0, 0.) (1, 2.) (2, 2.) It seems that in the way I am doing the assembly, Process 0 is not giving the contribution of its local assembly to process 1. For the assembly I am doing something like this (the complete example is attached) : !************************************* !--- Matrix Assembly !************************************* call DMCreateMatrix(dm,A,ierr) call DMGetLocalToGlobalMapping(dm,ltog,ierr) call MatSetLocalToGlobalMapping(A,ltog,ltog,ierr); call ISLocalToGlobalMappingDestroy(ltog,ierr); do icell = !--- Loop over cells do ic = ! Loop over closure (somehow only vertices) ipoin = closure((ic-1)*2+1) call DMPlexGetPointLocal(dm,ipoin,pStart,pEnd,ierr) ! ! Something to get location of point data in a local Vec ! enddo elstf(:,:) = 1.0 do i = !Loop over rows corresponding to dofs which are not constrained call MatSetValuesLocal(A,1,local_ldof(i)-1,ndof*nodes,local_ldof(:)-1, elstf(i,:),ADD_VALUES,ierr) enddo enddo call MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY,ierr) call MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY,ierr) !************************************* !--- End Assembly !************************************* There is something I am definitely missing because I don?t understand why it does not work. I was thinking maybe I need a function like DMLocallToGlobal?() but for matrices. I hope someone can help me with this and I am sorry if there is an obvious answer? Thanks in advance. Nestor --------------------------------------------------- --------------------------------------------------- Nestor Cerpa Gilvonio Postdoctoral researcher Department of Earth Sciences University of Minnesota 310 Pillsbury Drive SE Minnepolis, MN 55455 E-mail : ncerpagi at umn.edu -------------- next part -------------- An HTML attachment was scrubbed... URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: ParAssembly.F90 Type: application/octet-stream Size: 8108 bytes Desc: not available URL: -------------- next part -------------- An HTML attachment was scrubbed... URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: Q1_4cells.msh Type: application/octet-stream Size: 441 bytes Desc: not available URL: -------------- next part -------------- An HTML attachment was scrubbed... URL: From bsmith at mcs.anl.gov Sun Jun 5 20:44:16 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Sun, 5 Jun 2016 20:44:16 -0500 Subject: [petsc-users] TSSetExactFinalTime Behavior Without TSAdapt In-Reply-To: <7b409e70-60fa-a1f2-6dd1-052fdcbb8601@stanford.edu> References: <7b409e70-60fa-a1f2-6dd1-052fdcbb8601@stanford.edu> Message-ID: Paul, I don't think this was an expected change. Can you send code or walk us through the steps that led you to this? Barry > On Jun 3, 2016, at 10:23 AM, Paul Urbanczyk wrote: > > Hello, > > I recently upgraded to the latest version of PETSc (3.7.1) from the git repository. > > Running my code gave me an error message about TSSolve being in the wrong state and needing to call TSSetExactFinalTime. > > I added this function call with TS_EXACTFINALTIME_STEPOVER, but when I re-ran my code, I got a seg fault and error messages pointing to TSAdaptChoose. > > After fiddling around for a while, I found that I now needed to explicitly set the time step adaptation through TSAdaptSetType. > > Can anyone confirm that this is so? If so, it might be helpful to note that in documentation or error messages somewhere. > > Thanks, > > Paul > > From hongzhang at anl.gov Sun Jun 5 23:56:18 2016 From: hongzhang at anl.gov (Hong Zhang) Date: Sun, 5 Jun 2016 21:56:18 -0700 Subject: [petsc-users] TSSetExactFinalTime Behavior Without TSAdapt In-Reply-To: <7b409e70-60fa-a1f2-6dd1-052fdcbb8601@stanford.edu> References: <7b409e70-60fa-a1f2-6dd1-052fdcbb8601@stanford.edu> Message-ID: <4C1A5057-237A-4F05-93A6-0480630DC753@anl.gov> Did you call TSSetFromOptions() right before TSSolve()? I have seen similar errors when TSSetFromOptions() is not used. Hong > On Jun 3, 2016, at 8:23 AM, Paul Urbanczyk wrote: > > Hello, > > I recently upgraded to the latest version of PETSc (3.7.1) from the git repository. > > Running my code gave me an error message about TSSolve being in the wrong state and needing to call TSSetExactFinalTime. > > I added this function call with TS_EXACTFINALTIME_STEPOVER, but when I re-ran my code, I got a seg fault and error messages pointing to TSAdaptChoose. > > After fiddling around for a while, I found that I now needed to explicitly set the time step adaptation through TSAdaptSetType. > > Can anyone confirm that this is so? If so, it might be helpful to note that in documentation or error messages somewhere. > > Thanks, > > Paul > > From lawrence.mitchell at imperial.ac.uk Mon Jun 6 02:38:24 2016 From: lawrence.mitchell at imperial.ac.uk (Lawrence Mitchell) Date: Mon, 6 Jun 2016 08:38:24 +0100 Subject: [petsc-users] Parallel assembly FEM matrix In-Reply-To: References: Message-ID: <228249DD-8606-4777-B2E5-4BCF8E922400@imperial.ac.uk> > On 6 Jun 2016, at 01:43, Nestor Cerpa wrote: > > Hello, > > I am learning to use Petsc in order to modify my sequential FEM code to work in parallel. First, I am trying to understand how a FEM assembly loop would work in parallel using Petsc but I run into some problems. > > I made a simple example to explain the issue : > - I read a simple mesh (generated by gmsh) with 4 quadrilaterls and generate the corresponding DMPlex > - I define a scalar field on vertices > - Vertices on Bottom and Top boundaries are contrained (so I have 3 unknowns) > - I create a DM Matrix > - For the purpose of my example during the assembly I define an ?elementary matrix? containing only ones > > When I run the program with one process I obtain what the matrix is supposed to be : > > Mat Object: 1 MPI processes > type: seqaij > row 0: (0, 2.) (2, 2.) > row 1: (1, 2.) (2, 2.) > row 2: (0, 2.) (1, 2.) (2, 4.) > > But running with two processes gives me this : > > Mat Object: 2 MPI processes > type: mpiaij > row 0: (0, 2.) (2, 0.) > row 1: (1, 2.) (2, 2.) > row 2: (0, 0.) (1, 2.) (2, 2.) > > It seems that in the way I am doing the assembly, Process 0 is not giving the contribution of its local assembly to process 1. > > > For the assembly I am doing something like this (the complete example is attached) : > > > !************************************* > !--- Matrix Assembly > !************************************* > > call DMCreateMatrix(dm,A,ierr) > call DMGetLocalToGlobalMapping(dm,ltog,ierr) > call MatSetLocalToGlobalMapping(A,ltog,ltog,ierr); > call ISLocalToGlobalMappingDestroy(ltog,ierr); > > > do icell = !--- Loop over cells > > do ic = ! Loop over closure (somehow only vertices) > ipoin = closure((ic-1)*2+1) > call DMPlexGetPointLocal(dm,ipoin,pStart,pEnd,ierr) > ! > ! Something to get location of point data in a local Vec > ! > enddo > > elstf(:,:) = 1.0 > > do i = !Loop over rows corresponding to dofs which are not constrained > call MatSetValuesLocal(A,1,local_ldof(i)-1,ndof*nodes,local_ldof(:)-1, elstf(i,:),ADD_VALUES,ierr) > enddo > > enddo > > call MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY,ierr) > call MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY,ierr) > > !************************************* > !--- End Assembly > !************************************* > > > > There is something I am definitely missing because I don?t understand why it does not work. I was thinking maybe I need a function like DMLocallToGlobal?() but for matrices. You can either do this "by hand" using DMPlexGetTransitiveClosure to get the points. Or else you use DMPlexMatSetClosure to scatter the element matrix to the appropriate points in the matrix. Note there is also a matching DMPlexVecSetClosure to set values in the residual vector, and DMPlexVecGetClosure to get the values in the closure of a point. So in pseudo-code you'd probably do: for c in cells: DMPlexVecGetClosure(dm, NULL, coeff, c, &csize, &values) ! build element matrix (using values) ... DMPlexVecRestoreClosure(dm, NULL, coeff, c, &size, &values) DMPlexMatSetClosure(dm, NULL, NULL, mat, c, element_matrix, ADD_VALUES) Cheers, Lawrence -------------- next part -------------- A non-text attachment was scrubbed... Name: signature.asc Type: application/pgp-signature Size: 455 bytes Desc: Message signed with OpenPGP using GPGMail URL: From Michael.Becker at physik.uni-giessen.de Mon Jun 6 07:10:07 2016 From: Michael.Becker at physik.uni-giessen.de (Michael Becker) Date: Mon, 6 Jun 2016 14:10:07 +0200 Subject: [petsc-users] Tuning performance for simple solver In-Reply-To: References: <57515DF2.3090405@physik.uni-giessen.de> <57519561.30502@physik.uni-giessen.de> Message-ID: <5755681F.5050606@physik.uni-giessen.de> For clarification (as it seems I may have misused certain terms): Poisson's equation is meant to be solved ~1E6 times with successively changing right handed side. Assembling the matrix wont be a dominating part of the solution process as long as it can be reused. My initial concerns involved possible flaws in the set-up or optimizations I wouldn't come up with myself. A certain amount of nodes within the grid define walls of arbitrary shape by having a fixed value in the solution vector (e.g. capacitor plates with fixed potential). I account for those by replacing the correspondent matrix rows by rows of the identity matrix and by adjusting the rhs vector. Nonetheless, algebraic multigrid seems to work really well compared to other preconditioners. Can I expect any further runtime improvements by using additional options like -pc_mg_smoothdown <1> or are the standard values generally sufficient? Thanks, Michael Am 03.06.2016 um 16:56 schrieb Dave May: > > > On 3 June 2016 at 15:34, Michael Becker > > wrote: > > So using -log_summary helps me find out how much time is actually > spent on the PETSc routines that are repeatedly called. Since that > part of my code is fairly simple: > > PetscScalar *barray; > VecGetArray(b,&barray); > for (int i=0; i if (bound[i]==0) > barray[i] = charge[i]*ih*iepsilon0; > else > barray[i] = phi[i]; > } > VecRestoreArray(b,&barray); > > KSPSolve(ksp,b,x); > > KSPGetSolution(ksp,&x); > PetscScalar *xarray; > VecGetArray(x,&xarray); > for (int i=0; i phi[i] = xarray[i]; > VecRestoreArray(x,&xarray); > > > Well - you also have user code which assembles a matrix... > > However it seems assembly is not taking much time. > Note that this is not always the case, for instance if the > preallocation was done incorrectly. > > , I don't see how additional log states would help me. > > > The point of profiling is to precisely identify calls which consume > the most time, > rather than just _assuming_ which functions consume the largest > fraction of time. > > Now we are all on the same page and can correct state that the solve > is the problem. > > Without knowing anything other than you are solving Poisson, the > simplest preconditioner to try out which > can yield scalable and optimal results is algebraic multigrid. > Try the option: > -pc_type gamg > > So I would then still just test which KSP method is the fastest? > > I ran a test over 1000 iterations; this is the output: >> Max Max/Min Avg Total >> Time (sec): 1.916e+02 1.00055 1.915e+02 >> Objects: 1.067e+03 1.00000 1.067e+03 >> Flops: 5.730e+10 1.22776 5.360e+10 1.158e+13 >> Flops/sec: 2.992e+08 1.22792 2.798e+08 6.044e+10 >> MPI Messages: 1.900e+06 3.71429 1.313e+06 2.835e+08 >> MPI Message Lengths: 1.138e+09 2.38189 6.824e+02 1.935e+11 >> MPI Reductions: 1.462e+05 1.00000 >> >> Flop counting convention: 1 flop = 1 real number operation of >> type (multiply/divide/add/subtract) >> e.g., VecAXPY() for real vectors of >> length N --> 2N flops >> and VecAXPY() for complex vectors of >> length N --> 8N flops >> >> Summary of Stages: ----- Time ------ ----- Flops ----- --- >> Messages --- -- Message Lengths -- -- Reductions -- >> Avg %Total Avg %Total counts >> %Total Avg %Total counts %Total >> 0: Main Stage: 1.9154e+02 100.0% 1.1577e+13 100.0% >> 2.835e+08 100.0% 6.824e+02 100.0% 1.462e+05 100.0% >> >> ------------------------------------------------------------------------------------------------------------------------ >> See the 'Profiling' chapter of the users' manual for details on >> interpreting output. >> Phase summary info: >> Count: number of times phase was executed >> Time and Flops: Max - maximum over all processors >> Ratio - ratio of maximum to minimum over all >> processors >> Mess: number of messages sent >> Avg. len: average message length (bytes) >> Reduct: number of global reductions >> Global: entire computation >> Stage: stages of a computation. Set stages with >> PetscLogStagePush() and PetscLogStagePop(). >> %T - percent time in this phase %F - percent flops >> in this phase >> %M - percent messages in this phase %L - percent >> message lengths in this phase >> %R - percent reductions in this phase >> Total Mflop/s: 10e-6 * (sum of flops over all processors)/(max >> time over all processors) >> ------------------------------------------------------------------------------------------------------------------------ >> Event Count Time (sec) >> Flops --- Global --- --- Stage --- >> Total >> Max Ratio Max Ratio Max Ratio Mess >> Avg len Reduct %T %F %M %L %R %T %F %M %L %R Mflop/s >> ------------------------------------------------------------------------------------------------------------------------ >> >> --- Event Stage 0: Main Stage >> >> KSPGMRESOrthog 70070 1.0 7.8035e+01 2.3 1.94e+10 1.2 0.0e+00 >> 0.0e+00 7.0e+04 29 34 0 0 48 29 34 0 0 48 50538 >> KSPSetUp 2 1.0 1.5209e-03 1.1 0.00e+00 0.0 0.0e+00 >> 0.0e+00 1.0e+01 0 0 0 0 0 0 0 0 0 0 0 >> KSPSolve 1001 1.0 1.9097e+02 1.0 5.73e+10 1.2 2.8e+08 >> 6.8e+02 1.5e+05100100100100100 100100100100100 60621 >> VecMDot 70070 1.0 6.9833e+01 2.8 9.69e+09 1.2 0.0e+00 >> 0.0e+00 7.0e+04 25 17 0 0 48 25 17 0 0 48 28235 >> VecNorm 74074 1.0 1.1570e+01 1.7 7.28e+08 1.2 0.0e+00 >> 0.0e+00 7.4e+04 5 1 0 0 51 5 1 0 0 51 12804 >> VecScale 73073 1.0 5.6676e-01 1.3 3.59e+08 1.2 0.0e+00 >> 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 128930 >> VecCopy 3003 1.0 1.0008e-01 1.6 0.00e+00 0.0 0.0e+00 >> 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 >> VecSet 77080 1.0 1.3647e+00 1.4 0.00e+00 0.0 0.0e+00 >> 0.0e+00 0.0e+00 1 0 0 0 0 1 0 0 0 0 0 >> VecAXPY 6006 1.0 1.0779e-01 1.7 5.90e+07 1.2 0.0e+00 >> 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 111441 >> VecMAXPY 73073 1.0 9.2155e+00 1.3 1.04e+10 1.2 0.0e+00 >> 0.0e+00 0.0e+00 4 18 0 0 0 4 18 0 0 0 229192 >> VecScatterBegin 73073 1.0 7.0538e+00 4.4 0.00e+00 0.0 2.8e+08 >> 6.8e+02 0.0e+00 2 0100100 0 2 0100100 0 0 >> VecScatterEnd 73073 1.0 7.8382e+00 2.6 0.00e+00 0.0 0.0e+00 >> 0.0e+00 0.0e+00 3 0 0 0 0 3 0 0 0 0 0 >> VecNormalize 73073 1.0 1.1774e+01 1.6 1.08e+09 1.2 0.0e+00 >> 0.0e+00 7.3e+04 5 2 0 0 50 5 2 0 0 50 18619 >> MatMult 73073 1.0 8.6056e+01 1.7 1.90e+10 1.3 2.8e+08 >> 6.8e+02 0.0e+00 36 33100100 0 36 33100100 0 44093 >> MatSolve 74074 1.0 5.4865e+01 1.2 1.71e+10 1.2 0.0e+00 >> 0.0e+00 0.0e+00 27 30 0 0 0 27 30 0 0 0 63153 >> MatLUFactorNum 1 1.0 4.1230e-03 2.6 9.89e+05241.4 0.0e+00 >> 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 36155 >> MatILUFactorSym 1 1.0 2.1942e-03 1.3 0.00e+00 0.0 0.0e+00 >> 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 >> MatAssemblyBegin 2 1.0 5.6112e-03 4.8 0.00e+00 0.0 0.0e+00 >> 0.0e+00 4.0e+00 0 0 0 0 0 0 0 0 0 0 0 >> MatAssemblyEnd 2 1.0 6.3889e-03 1.0 0.00e+00 0.0 7.8e+03 >> 1.7e+02 8.0e+00 0 0 0 0 0 0 0 0 0 0 0 >> MatGetRowIJ 1 1.0 2.8849e-0515.1 0.00e+00 0.0 0.0e+00 >> 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 >> MatGetOrdering 1 1.0 1.2279e-04 1.6 0.00e+00 0.0 0.0e+00 >> 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 >> PCSetUp 2 1.0 6.6662e-03 1.8 9.89e+05241.4 0.0e+00 >> 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 22361 >> PCSetUpOnBlocks 1001 1.0 7.5164e-03 1.7 9.89e+05241.4 0.0e+00 >> 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 19832 >> PCApply 74074 1.0 5.9613e+01 1.2 1.71e+10 1.2 0.0e+00 >> 0.0e+00 0.0e+00 29 30 0 0 0 29 30 0 0 0 58123 >> ------------------------------------------------------------------------------------------------------------------------ >> >> Memory usage is given in bytes: >> >> Object Type Creations Destructions Memory >> Descendants' Mem. >> Reports information only for process 0. >> >> --- Event Stage 0: Main Stage >> >> Krylov Solver 2 2 19576 0. >> DMKSP interface 1 1 656 0. >> Vector 1043 1043 42492328 0. >> Vector Scatter 2 2 41496 0. >> Matrix 4 4 3163588 0. >> Distributed Mesh 1 1 5080 0. >> Star Forest Bipartite Graph 2 2 1728 0. >> Discrete System 1 1 872 0. >> Index Set 7 7 71796 0. >> IS L to G Mapping 1 1 28068 0. >> Preconditioner 2 2 1912 0. >> Viewer 1 0 0 0. >> ======================================================================================================================== >> Average time to get PetscTime(): 1.90735e-07 >> Average time for MPI_Barrier(): 0.000184202 >> Average time for zero size MPI_Send(): 1.03469e-05 >> #PETSc Option Table entries: >> -log_summary >> #End of PETSc Option Table entries >> Compiled without FORTRAN kernels >> Compiled with full precision matrices (default) >> sizeof(short) 2 sizeof(int) 4 sizeof(long) 8 sizeof(void*) 8 >> sizeof(PetscScalar) 8 sizeof(PetscInt) 4 >> Configure options: --download-f2cblaslapack --with-fc=0 >> --with-debugging=0 COPTFLAGS=-O3 CXXOPTFLAGS=-O3 > > Regarding Matt's answer: It's generally a rectangular grid (3D) of > predetermined size (not necessarily a cube). Additionally, objects > of arbitrary shape can be defined by Dirichlet boundary > conditions. Is geometric MG still viable? > > Thanks, > Michael > > > > Am 03.06.2016 um 14:32 schrieb Matthew Knepley: >> On Fri, Jun 3, 2016 at 5:56 AM, Dave May > > wrote: >> >> On 3 June 2016 at 11:37, Michael Becker >> > > wrote: >> >> Dear all, >> >> I have a few questions regarding possible performance >> enhancements for the PETSc solver I included in my project. >> >> It's a particle-in-cell plasma simulation written in C++, >> where Poisson's equation needs to be solved repeatedly on >> every timestep. >> The simulation domain is discretized using finite >> differences, so the solver therefore needs to be able to >> efficiently solve the linear system A x = b successively >> with changing b. The solution x of the previous timestep >> is generally a good initial guess for the solution. >> >> I wrote a class PETScSolver that holds all PETSc objects >> and necessary information about domain size and >> decomposition. To solve the linear system, two arrays, >> 'phi' and 'charge', are passed to a member function >> solve(), where they are copied to PETSc vectors, and >> KSPSolve() is called. After convergence, the solution is >> then transferred again to the phi array so that other >> program parts can use it. >> >> The matrix is created using DMDA. An array 'bound' is >> used to determine whether a node is either a Dirichlet BC >> or holds a charge. >> >> I attached three files, petscsolver.h, petscsolver.cpp >> and main.cpp, that contain a shortened version of the >> solver class and a set-up to initialize and run a simple >> problem. >> >> Is there anything I can change to generally make the >> program run faster? >> >> >> Before changing anything, you should profile your code to see >> where time is being spent. >> >> To that end, you should compile an optimized build of petsc, >> link it to you application and run your code with the option >> -log_summary. The -log_summary flag will generate a >> performance profile of specific functionality within petsc >> (KSPSolve, MatMult etc) so you can see where all the time is >> being spent. >> >> As a second round of profiling, you should consider >> registering specific functionality in your code you think is >> performance critical. >> You can do this using the function PetscLogStageRegister() >> >> http://www.mcs.anl.gov/petsc/petsc-current/docs/manualpages/Profiling/PetscLogStageRegister.html >> >> >> Check out the examples listed at the bottom of this web page >> to see how to log stages. Once you've registered stages, >> these will appear in the report provided by -log_summary >> >> >> Do everything Dave said. I will also note that since you are >> using FD, I am guessing you are solving on a square. Then >> you should really be using geometric MG. We support this through >> the DMDA object. >> >> Thanks, >> >> Matt >> >> Thanks, >> Dave >> >> >> And, since I'm rather unexperienced with KSP methods, how >> do I efficiently choose PC and KSP? Just by testing every >> combination? >> Would multigrid be a viable option as a pure solver >> (-ksp_type preonly)? >> >> Thanks, >> Michael >> >> >> >> >> >> -- >> What most experimenters take for granted before they begin their >> experiments is infinitely more interesting than any results to >> which their experiments lead. >> -- Norbert Wiener > > -------------- next part -------------- An HTML attachment was scrubbed... URL: From sophie.leger at umoncton.ca Mon Jun 6 12:49:28 2016 From: sophie.leger at umoncton.ca (=?iso-8859-1?Q?Sophie_L=E9ger?=) Date: Mon, 6 Jun 2016 17:49:28 +0000 Subject: [petsc-users] Functionality in Petsc Message-ID: Hello, I'm trying to multiply a column vector with a line vector (which would result in a matrix) and am wondering if this is possible with Petsc? I have looked, but have not found anything yet. Would it be possible to let me know if such a functionality exists and if so guide me in the right direction? Thank you very much for your help! Sophie Leger Mathematics professor - Universit? de Moncton -------------- next part -------------- An HTML attachment was scrubbed... URL: From patrick.sanan at gmail.com Mon Jun 6 12:59:35 2016 From: patrick.sanan at gmail.com (Patrick Sanan) Date: Mon, 6 Jun 2016 19:59:35 +0200 Subject: [petsc-users] Functionality in Petsc In-Reply-To: References: Message-ID: Assuming that you don't want to store this dense rank-1 matrix explicitly, one way to go is to define your own MATSHELL which holds your two vectors and can apply the outer product to a vector. > Am 06.06.2016 um 19:49 schrieb Sophie L?ger : > > Hello, > > I?m trying to multiply a column vector with a line vector (which would result in a matrix) and am wondering if this is possible with Petsc? I have looked, but have not found anything yet. Would it be possible to let me know if such a functionality exists and if so guide me in the right direction? > > Thank you very much for your help! > Sophie Leger > Mathematics professor ? Universit? de Moncton -------------- next part -------------- An HTML attachment was scrubbed... URL: From faraz_hussain at yahoo.com Mon Jun 6 13:02:45 2016 From: faraz_hussain at yahoo.com (Faraz Hussain) Date: Mon, 6 Jun 2016 18:02:45 +0000 (UTC) Subject: [petsc-users] How to create symmetric matrix? References: <419029197.5870943.1465236165229.JavaMail.yahoo.ref@mail.yahoo.com> Message-ID: <419029197.5870943.1465236165229.JavaMail.yahoo@mail.yahoo.com> I am learning petsc and using the following code to insert values into my matrix: ierr = MatSetValue(A, row, col, value,INSERT_VALUES); ierr = MatSetValue(A, col, row, value,INSERT_VALUES); Since my matrix is symmetric, I want to speed things up only calling MatSetValue once. I tried setting: ?ierr = MatSetOption(A,MAT_SYMMETRIC,PETSC_TRUE); However, whenver I solve Ax=b, I get a wrong solution for x ( almost all zeroes ).? I am guessing MAT_SYMMETRIC is not automatically creating the lower triangular matrix from the upper triangular matrix? -------------- next part -------------- An HTML attachment was scrubbed... URL: From bsmith at mcs.anl.gov Mon Jun 6 14:27:07 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Mon, 6 Jun 2016 14:27:07 -0500 Subject: [petsc-users] How to create symmetric matrix? In-Reply-To: <419029197.5870943.1465236165229.JavaMail.yahoo@mail.yahoo.com> References: <419029197.5870943.1465236165229.JavaMail.yahoo.ref@mail.yahoo.com> <419029197.5870943.1465236165229.JavaMail.yahoo@mail.yahoo.com> Message-ID: <5B9539DD-4F72-4B39-841A-4A1EE6498668@mcs.anl.gov> > On Jun 6, 2016, at 1:02 PM, Faraz Hussain wrote: > > I am learning petsc and using the following code to insert values into my matrix: > > ierr = MatSetValue(A, row, col, value,INSERT_VALUES); > ierr = MatSetValue(A, col, row, value,INSERT_VALUES); > > Since my matrix is symmetric, I want to speed things up only calling MatSetValue once. I tried setting: > > ierr = MatSetOption(A,MAT_SYMMETRIC,PETSC_TRUE); > > However, whenver I solve Ax=b, I get a wrong solution for x ( almost all zeroes ). I am guessing MAT_SYMMETRIC is not automatically creating the lower triangular matrix from the upper triangular matrix? Correct. You can use the SBAIJ format which stores only the diagonal and upper triangular portion of the matrix. Then you do not need to set the other values. Barry > > From bsmith at mcs.anl.gov Mon Jun 6 15:16:41 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Mon, 6 Jun 2016 15:16:41 -0500 Subject: [petsc-users] MUMPS error reporting in PETSc-3.7 In-Reply-To: References: Message-ID: <0077D3FF-5D11-48EF-B6F3-59072689C189@mcs.anl.gov> David, Actually all the routines for accessing the MUMPS information already exist. I have added this to the manual page for MATSOLVERMUMPS Notes: When a MUMPS factorization fails inside a KSP solve, for example with a KSP_DIVERGED_PCSETUP_FAILED, one can find the MUMPS information about the failure by calling $ KSPGetPC(ksp,&pc); $ PCFactorGetMatrix(pc,&mat); $ MatMumpsGetInfo(mat,....); $ MatMumpsGetInfog(mat,....); etc. .seealso: PCFactorSetMatSolverPackage(), MatSolverPackage, MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog(), KSPGetPC(), PCGetFactor(), PCFactorGetMatrix() Please let us know if this does not work Barry > On Jun 5, 2016, at 12:45 PM, David Knezevic wrote: > > On Sun, Jun 5, 2016 at 1:42 PM, Barry Smith wrote: > > > On Jun 5, 2016, at 12:12 PM, David Knezevic wrote: > > > > In PETSc-3.6, when I hit an error using the MUMPS solver, I would get an error like this: > > > > [0]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- > > [0]PETSC ERROR: Error in external library > > [0]PETSC ERROR: Error reported by MUMPS in numerical factorization phase: INFO(1)=-9, INFO(2)=351513 > > > > In PETSc-3.7, the solver now reports "KSP_DIVERGED_PCSETUP_FAILED" instead. The new behavior is definitely better, so thanks for the update! However, I'd still be curious to be able to see what error codes MUMPS returned (which was previously provided in INFO(1) and INFO(2)), since that can be helpful for diagnosing the reason for the solver failure. Is that info still available somehow? > > David, > > There are a couple of ways to obtain them both clunky, we should also provide a simple function call interface such as MatMumpsGetInfo(Mat,int *infog,int *info); > > Anyways right now you can run with -info and it prints the information (along with too much other information) or you can run with -ksp_error_if_not_converged and then it reverts back to the old behavior of stopping immediately and printing the error message and info values. > > > OK, got it, thanks! > > David From david.knezevic at akselos.com Mon Jun 6 16:38:05 2016 From: david.knezevic at akselos.com (David Knezevic) Date: Mon, 6 Jun 2016 17:38:05 -0400 Subject: [petsc-users] MUMPS error reporting in PETSc-3.7 In-Reply-To: <0077D3FF-5D11-48EF-B6F3-59072689C189@mcs.anl.gov> References: <0077D3FF-5D11-48EF-B6F3-59072689C189@mcs.anl.gov> Message-ID: On Mon, Jun 6, 2016 at 4:16 PM, Barry Smith wrote: > > David, > > Actually all the routines for accessing the MUMPS information already > exist. I have added this to the manual page for MATSOLVERMUMPS > > Notes: When a MUMPS factorization fails inside a KSP solve, for > example with a KSP_DIVERGED_PCSETUP_FAILED, one can find the MUMPS > information about the failure by calling > $ KSPGetPC(ksp,&pc); > $ PCFactorGetMatrix(pc,&mat); > $ MatMumpsGetInfo(mat,....); > $ MatMumpsGetInfog(mat,....); etc. > > .seealso: PCFactorSetMatSolverPackage(), MatSolverPackage, > MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), > MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), > MatMumpsGetRinfo(), MatMumpsGetRinfog(), KSPGetPC(), PCGetFactor(), > PCFactorGetMatrix() > > Please let us know if this does not work > Thanks! That looks good. I've changed my code to use this, and I'll let you know if I have any issues with it. Thanks, David > On Jun 5, 2016, at 12:45 PM, David Knezevic > wrote: > > > > On Sun, Jun 5, 2016 at 1:42 PM, Barry Smith wrote: > > > > > On Jun 5, 2016, at 12:12 PM, David Knezevic < > david.knezevic at akselos.com> wrote: > > > > > > In PETSc-3.6, when I hit an error using the MUMPS solver, I would get > an error like this: > > > > > > [0]PETSC ERROR: --------------------- Error Message > -------------------------------------------------------------- > > > [0]PETSC ERROR: Error in external library > > > [0]PETSC ERROR: Error reported by MUMPS in numerical factorization > phase: INFO(1)=-9, INFO(2)=351513 > > > > > > In PETSc-3.7, the solver now reports "KSP_DIVERGED_PCSETUP_FAILED" > instead. The new behavior is definitely better, so thanks for the update! > However, I'd still be curious to be able to see what error codes MUMPS > returned (which was previously provided in INFO(1) and INFO(2)), since that > can be helpful for diagnosing the reason for the solver failure. Is that > info still available somehow? > > > > David, > > > > There are a couple of ways to obtain them both clunky, we should > also provide a simple function call interface such as > MatMumpsGetInfo(Mat,int *infog,int *info); > > > > Anyways right now you can run with -info and it prints the > information (along with too much other information) or you can run with > -ksp_error_if_not_converged and then it reverts back to the old behavior of > stopping immediately and printing the error message and info values. > > > > > > OK, got it, thanks! > > > > David > > -------------- next part -------------- An HTML attachment was scrubbed... URL: From ncerpagi at umn.edu Tue Jun 7 00:38:26 2016 From: ncerpagi at umn.edu (Nestor Cerpa) Date: Tue, 7 Jun 2016 00:38:26 -0500 Subject: [petsc-users] Parallel assembly FEM matrix In-Reply-To: <228249DD-8606-4777-B2E5-4BCF8E922400@imperial.ac.uk> References: <228249DD-8606-4777-B2E5-4BCF8E922400@imperial.ac.uk> Message-ID: <014C612C-6AD8-4E4D-96C1-C2274E2B5E45@umn.edu> Hi Lawrence, Thank you. Now it works! I?ve looked at the source code for DMPlexMatSetClosure() and it uses MatSetValues() so I am wondering in which situation should we use MatSetValuesLocal() ? and how to scatter the local matrices assembled with this ? Nestor > On Jun 6, 2016, at 2:38 AM, Lawrence Mitchell wrote: > > >> On 6 Jun 2016, at 01:43, Nestor Cerpa wrote: >> >> Hello, >> >> I am learning to use Petsc in order to modify my sequential FEM code to work in parallel. First, I am trying to understand how a FEM assembly loop would work in parallel using Petsc but I run into some problems. >> >> I made a simple example to explain the issue : >> - I read a simple mesh (generated by gmsh) with 4 quadrilaterls and generate the corresponding DMPlex >> - I define a scalar field on vertices >> - Vertices on Bottom and Top boundaries are contrained (so I have 3 unknowns) >> - I create a DM Matrix >> - For the purpose of my example during the assembly I define an ?elementary matrix? containing only ones >> >> When I run the program with one process I obtain what the matrix is supposed to be : >> >> Mat Object: 1 MPI processes >> type: seqaij >> row 0: (0, 2.) (2, 2.) >> row 1: (1, 2.) (2, 2.) >> row 2: (0, 2.) (1, 2.) (2, 4.) >> >> But running with two processes gives me this : >> >> Mat Object: 2 MPI processes >> type: mpiaij >> row 0: (0, 2.) (2, 0.) >> row 1: (1, 2.) (2, 2.) >> row 2: (0, 0.) (1, 2.) (2, 2.) >> >> It seems that in the way I am doing the assembly, Process 0 is not giving the contribution of its local assembly to process 1. >> >> >> For the assembly I am doing something like this (the complete example is attached) : >> >> >> !************************************* >> !--- Matrix Assembly >> !************************************* >> >> call DMCreateMatrix(dm,A,ierr) >> call DMGetLocalToGlobalMapping(dm,ltog,ierr) >> call MatSetLocalToGlobalMapping(A,ltog,ltog,ierr); >> call ISLocalToGlobalMappingDestroy(ltog,ierr); >> >> >> do icell = !--- Loop over cells >> >> do ic = ! Loop over closure (somehow only vertices) >> ipoin = closure((ic-1)*2+1) >> call DMPlexGetPointLocal(dm,ipoin,pStart,pEnd,ierr) >> ! >> ! Something to get location of point data in a local Vec >> ! >> enddo >> >> elstf(:,:) = 1.0 >> >> do i = !Loop over rows corresponding to dofs which are not constrained >> call MatSetValuesLocal(A,1,local_ldof(i)-1,ndof*nodes,local_ldof(:)-1, elstf(i,:),ADD_VALUES,ierr) >> enddo >> >> enddo >> >> call MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY,ierr) >> call MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY,ierr) >> >> !************************************* >> !--- End Assembly >> !************************************* >> >> >> >> There is something I am definitely missing because I don?t understand why it does not work. I was thinking maybe I need a function like DMLocallToGlobal?() but for matrices. > > > You can either do this "by hand" using DMPlexGetTransitiveClosure to get the points. Or else you use DMPlexMatSetClosure to scatter the element matrix to the appropriate points in the matrix. > > Note there is also a matching DMPlexVecSetClosure to set values in the residual vector, and DMPlexVecGetClosure to get the values in the closure of a point. > > So in pseudo-code you'd probably do: > > for c in cells: > DMPlexVecGetClosure(dm, NULL, coeff, c, &csize, &values) > ! build element matrix (using values) > ... > DMPlexVecRestoreClosure(dm, NULL, coeff, c, &size, &values) > DMPlexMatSetClosure(dm, NULL, NULL, mat, c, element_matrix, ADD_VALUES) > > Cheers, > > Lawrence > --------------------------------------------------- --------------------------------------------------- Nestor Cerpa Gilvonio Postdoctoral research associate Department of Earth Sciences University of Minnesota 310 Pillsbury Drive SE Minnepolis, MN 55455 E-mail : ncerpagi at umn.edu -------------- next part -------------- An HTML attachment was scrubbed... URL: From knepley at gmail.com Tue Jun 7 01:16:10 2016 From: knepley at gmail.com (Matthew Knepley) Date: Tue, 7 Jun 2016 07:16:10 +0100 Subject: [petsc-users] Parallel assembly FEM matrix In-Reply-To: <014C612C-6AD8-4E4D-96C1-C2274E2B5E45@umn.edu> References: <228249DD-8606-4777-B2E5-4BCF8E922400@imperial.ac.uk> <014C612C-6AD8-4E4D-96C1-C2274E2B5E45@umn.edu> Message-ID: On Tue, Jun 7, 2016 at 6:38 AM, Nestor Cerpa wrote: > Hi Lawrence, > > Thank you. Now it works! > > I?ve looked at the source code for DMPlexMatSetClosure() and it uses > MatSetValues() so I am wondering in which situation should we use > MatSetValuesLocal() ? and how to scatter the local matrices assembled with > this ? > MatSetValuesLocal() just uses a mapping from local indices to global indices, and then calls MatSetValues(). It does not assemble a different type of matrix. Thanks, Matt > Nestor > > > On Jun 6, 2016, at 2:38 AM, Lawrence Mitchell < > lawrence.mitchell at imperial.ac.uk> wrote: > > > On 6 Jun 2016, at 01:43, Nestor Cerpa wrote: > > Hello, > > I am learning to use Petsc in order to modify my sequential FEM code to > work in parallel. First, I am trying to understand how a FEM assembly loop > would work in parallel using Petsc but I run into some problems. > > I made a simple example to explain the issue : > - I read a simple mesh (generated by gmsh) with 4 quadrilaterls and > generate the corresponding DMPlex > - I define a scalar field on vertices > - Vertices on Bottom and Top boundaries are contrained (so I have 3 > unknowns) > - I create a DM Matrix > - For the purpose of my example during the assembly I define an > ?elementary matrix? containing only ones > > When I run the program with one process I obtain what the matrix is > supposed to be : > > Mat Object: 1 MPI processes > type: seqaij > row 0: (0, 2.) (2, 2.) > row 1: (1, 2.) (2, 2.) > row 2: (0, 2.) (1, 2.) (2, 4.) > > But running with two processes gives me this : > > Mat Object: 2 MPI processes > type: mpiaij > row 0: (0, 2.) (2, 0.) > row 1: (1, 2.) (2, 2.) > row 2: (0, 0.) (1, 2.) (2, 2.) > > It seems that in the way I am doing the assembly, Process 0 is not giving > the contribution of its local assembly to process 1. > > > For the assembly I am doing something like this (the complete example is > attached) : > > > !************************************* > !--- Matrix Assembly > !************************************* > > call DMCreateMatrix(dm,A,ierr) > call DMGetLocalToGlobalMapping(dm,ltog,ierr) > call MatSetLocalToGlobalMapping(A,ltog,ltog,ierr); > call ISLocalToGlobalMappingDestroy(ltog,ierr); > > > do icell = !--- Loop over cells > > do ic = ! Loop over closure (somehow only vertices) > ipoin = closure((ic-1)*2+1) > call DMPlexGetPointLocal(dm,ipoin,pStart,pEnd,ierr) > ! > ! Something to get location of point data in a local Vec > ! > enddo > > elstf(:,:) = 1.0 > > do i = !Loop over rows corresponding to dofs which are not > constrained > call > MatSetValuesLocal(A,1,local_ldof(i)-1,ndof*nodes,local_ldof(:)-1, > elstf(i,:),ADD_VALUES,ierr) > enddo > > enddo > > call MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY,ierr) > call MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY,ierr) > > !************************************* > !--- End Assembly > !************************************* > > > > There is something I am definitely missing because I don?t understand why > it does not work. I was thinking maybe I need a function like > DMLocallToGlobal?() but for matrices. > > > > You can either do this "by hand" using DMPlexGetTransitiveClosure to get > the points. Or else you use DMPlexMatSetClosure to scatter the element > matrix to the appropriate points in the matrix. > > Note there is also a matching DMPlexVecSetClosure to set values in the > residual vector, and DMPlexVecGetClosure to get the values in the closure > of a point. > > So in pseudo-code you'd probably do: > > for c in cells: > DMPlexVecGetClosure(dm, NULL, coeff, c, &csize, &values) > ! build element matrix (using values) > ... > DMPlexVecRestoreClosure(dm, NULL, coeff, c, &size, &values) > DMPlexMatSetClosure(dm, NULL, NULL, mat, c, element_matrix, ADD_VALUES) > > Cheers, > > Lawrence > > > > > --------------------------------------------------- > --------------------------------------------------- > > Nestor Cerpa Gilvonio > Postdoctoral research associate > > Department of Earth Sciences > University of Minnesota > 310 Pillsbury Drive SE > Minnepolis, MN 55455 > > E-mail : ncerpagi at umn.edu > > -- What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead. -- Norbert Wiener -------------- next part -------------- An HTML attachment was scrubbed... URL: From rl.chen at siat.ac.cn Tue Jun 7 04:09:06 2016 From: rl.chen at siat.ac.cn (Rongliang Chen) Date: Tue, 07 Jun 2016 17:09:06 +0800 Subject: [petsc-users] How to refine the Vertex Sets in DMPlex Message-ID: <57568F32.6030401@siat.ac.cn> Dear All, I am using the DMRefine_Plex to refine a mesh. In the coarse mesh, it has a label "Vertex Sets" to mark the boundary nodes. I found that the DMRefine_Plex did not refine this label. For example, in the coarse mesh, there are 100 nodes on the boundary, that is the number of nodes in the label is 100. In the refined mesh (uniformly refined), the number of nodes in the label should be larger than 100, but I found that this number is still 100, which means the newly added nodes on the boundary were not added to the label. But I need a refined label to set the boundary conditions. Anyone can tell me how to get a refined Vertex Sets label? Best regards, Rongliang From mfadams at lbl.gov Tue Jun 7 06:36:44 2016 From: mfadams at lbl.gov (Mark Adams) Date: Tue, 7 Jun 2016 12:36:44 +0100 Subject: [petsc-users] Tuning performance for simple solver In-Reply-To: <5755681F.5050606@physik.uni-giessen.de> References: <57515DF2.3090405@physik.uni-giessen.de> <57519561.30502@physik.uni-giessen.de> <5755681F.5050606@physik.uni-giessen.de> Message-ID: > > > Nonetheless, algebraic multigrid seems to work really well compared to > other preconditioners. Can I expect any further runtime improvements by > using additional options like -pc_mg_smoothdown <1> or are the standard > values generally sufficient? > Getting almost one digit reduction in residual per iteration is about as good as it gets. If you are (far) away from that then there is some discussion in the document on how to try to improve GAMG. If GAMG is spending a lot more time in the matrix setup phase (RAP or 'MatPtAP..' in log view) than the 'KSPSolve' then you may be coarsening too slowly and you can use the threshold parameters and graph squaring to increase coarsening rate and thereby decrease setup cost and cost per iteration, and reducing overall solve time. > > Thanks, > Michael > > > > Am 03.06.2016 um 16:56 schrieb Dave May: > > > > On 3 June 2016 at 15:34, Michael Becker < > Michael.Becker at physik.uni-giessen.de> wrote: > >> So using -log_summary helps me find out how much time is actually spent >> on the PETSc routines that are repeatedly called. Since that part of my >> code is fairly simple: >> >> PetscScalar *barray; >> VecGetArray(b,&barray); >> for (int i=0; i> if (bound[i]==0) >> barray[i] = charge[i]*ih*iepsilon0; >> else >> barray[i] = phi[i]; >> } >> VecRestoreArray(b,&barray); >> >> KSPSolve(ksp,b,x); >> >> KSPGetSolution(ksp,&x); >> PetscScalar *xarray; >> VecGetArray(x,&xarray); >> for (int i=0; i> phi[i] = xarray[i]; >> VecRestoreArray(x,&xarray); >> >> > Well - you also have user code which assembles a matrix... > > However it seems assembly is not taking much time. > Note that this is not always the case, for instance if the preallocation > was done incorrectly. > > > >> , I don't see how additional log states would help me. >> > > The point of profiling is to precisely identify calls which consume the > most time, > rather than just _assuming_ which functions consume the largest fraction > of time. > > Now we are all on the same page and can correct state that the solve is > the problem. > > Without knowing anything other than you are solving Poisson, the simplest > preconditioner to try out which > can yield scalable and optimal results is algebraic multigrid. > Try the option: > -pc_type gamg > > >> >> So I would then still just test which KSP method is the fastest? >> >> I ran a test over 1000 iterations; this is the output: >> >> Max Max/Min Avg Total >> Time (sec): 1.916e+02 1.00055 1.915e+02 >> Objects: 1.067e+03 1.00000 1.067e+03 >> Flops: 5.730e+10 1.22776 5.360e+10 1.158e+13 >> Flops/sec: 2.992e+08 1.22792 2.798e+08 6.044e+10 >> MPI Messages: 1.900e+06 3.71429 1.313e+06 2.835e+08 >> MPI Message Lengths: 1.138e+09 2.38189 6.824e+02 1.935e+11 >> MPI Reductions: 1.462e+05 1.00000 >> >> Flop counting convention: 1 flop = 1 real number operation of type >> (multiply/divide/add/subtract) >> e.g., VecAXPY() for real vectors of length N >> --> 2N flops >> and VecAXPY() for complex vectors of length N >> --> 8N flops >> >> Summary of Stages: ----- Time ------ ----- Flops ----- --- Messages >> --- -- Message Lengths -- -- Reductions -- >> Avg %Total Avg %Total counts >> %Total Avg %Total counts %Total >> 0: Main Stage: 1.9154e+02 100.0% 1.1577e+13 100.0% 2.835e+08 >> 100.0% 6.824e+02 100.0% 1.462e+05 100.0% >> >> >> ------------------------------------------------------------------------------------------------------------------------ >> See the 'Profiling' chapter of the users' manual for details on >> interpreting output. >> Phase summary info: >> Count: number of times phase was executed >> Time and Flops: Max - maximum over all processors >> Ratio - ratio of maximum to minimum over all processors >> Mess: number of messages sent >> Avg. len: average message length (bytes) >> Reduct: number of global reductions >> Global: entire computation >> Stage: stages of a computation. Set stages with PetscLogStagePush() >> and PetscLogStagePop(). >> %T - percent time in this phase %F - percent flops in this >> phase >> %M - percent messages in this phase %L - percent message >> lengths in this phase >> %R - percent reductions in this phase >> Total Mflop/s: 10e-6 * (sum of flops over all processors)/(max time >> over all processors) >> >> ------------------------------------------------------------------------------------------------------------------------ >> Event Count Time (sec) >> Flops --- Global --- --- Stage --- Total >> Max Ratio Max Ratio Max Ratio Mess Avg len >> Reduct %T %F %M %L %R %T %F %M %L %R Mflop/s >> >> ------------------------------------------------------------------------------------------------------------------------ >> >> --- Event Stage 0: Main Stage >> >> KSPGMRESOrthog 70070 1.0 7.8035e+01 2.3 1.94e+10 1.2 0.0e+00 0.0e+00 >> 7.0e+04 29 34 0 0 48 29 34 0 0 48 50538 >> KSPSetUp 2 1.0 1.5209e-03 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 >> 1.0e+01 0 0 0 0 0 0 0 0 0 0 0 >> KSPSolve 1001 1.0 1.9097e+02 1.0 5.73e+10 1.2 2.8e+08 6.8e+02 >> 1.5e+05100100100100100 100100100100100 60621 >> VecMDot 70070 1.0 6.9833e+01 2.8 9.69e+09 1.2 0.0e+00 0.0e+00 >> 7.0e+04 25 17 0 0 48 25 17 0 0 48 28235 >> VecNorm 74074 1.0 1.1570e+01 1.7 7.28e+08 1.2 0.0e+00 0.0e+00 >> 7.4e+04 5 1 0 0 51 5 1 0 0 51 12804 >> VecScale 73073 1.0 5.6676e-01 1.3 3.59e+08 1.2 0.0e+00 0.0e+00 >> 0.0e+00 0 1 0 0 0 0 1 0 0 0 128930 >> VecCopy 3003 1.0 1.0008e-01 1.6 0.00e+00 0.0 0.0e+00 0.0e+00 >> 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 >> VecSet 77080 1.0 1.3647e+00 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 >> 0.0e+00 1 0 0 0 0 1 0 0 0 0 0 >> VecAXPY 6006 1.0 1.0779e-01 1.7 5.90e+07 1.2 0.0e+00 0.0e+00 >> 0.0e+00 0 0 0 0 0 0 0 0 0 0 111441 >> VecMAXPY 73073 1.0 9.2155e+00 1.3 1.04e+10 1.2 0.0e+00 0.0e+00 >> 0.0e+00 4 18 0 0 0 4 18 0 0 0 229192 >> VecScatterBegin 73073 1.0 7.0538e+00 4.4 0.00e+00 0.0 2.8e+08 6.8e+02 >> 0.0e+00 2 0100100 0 2 0100100 0 0 >> VecScatterEnd 73073 1.0 7.8382e+00 2.6 0.00e+00 0.0 0.0e+00 0.0e+00 >> 0.0e+00 3 0 0 0 0 3 0 0 0 0 0 >> VecNormalize 73073 1.0 1.1774e+01 1.6 1.08e+09 1.2 0.0e+00 0.0e+00 >> 7.3e+04 5 2 0 0 50 5 2 0 0 50 18619 >> MatMult 73073 1.0 8.6056e+01 1.7 1.90e+10 1.3 2.8e+08 6.8e+02 >> 0.0e+00 36 33100100 0 36 33100100 0 44093 >> MatSolve 74074 1.0 5.4865e+01 1.2 1.71e+10 1.2 0.0e+00 0.0e+00 >> 0.0e+00 27 30 0 0 0 27 30 0 0 0 63153 >> MatLUFactorNum 1 1.0 4.1230e-03 2.6 9.89e+05241.4 0.0e+00 0.0e+00 >> 0.0e+00 0 0 0 0 0 0 0 0 0 0 36155 >> MatILUFactorSym 1 1.0 2.1942e-03 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 >> 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 >> MatAssemblyBegin 2 1.0 5.6112e-03 4.8 0.00e+00 0.0 0.0e+00 0.0e+00 >> 4.0e+00 0 0 0 0 0 0 0 0 0 0 0 >> MatAssemblyEnd 2 1.0 6.3889e-03 1.0 0.00e+00 0.0 7.8e+03 1.7e+02 >> 8.0e+00 0 0 0 0 0 0 0 0 0 0 0 >> MatGetRowIJ 1 1.0 2.8849e-0515.1 0.00e+00 0.0 0.0e+00 0.0e+00 >> 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 >> MatGetOrdering 1 1.0 1.2279e-04 1.6 0.00e+00 0.0 0.0e+00 0.0e+00 >> 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 >> PCSetUp 2 1.0 6.6662e-03 1.8 9.89e+05241.4 0.0e+00 0.0e+00 >> 0.0e+00 0 0 0 0 0 0 0 0 0 0 22361 >> PCSetUpOnBlocks 1001 1.0 7.5164e-03 1.7 9.89e+05241.4 0.0e+00 0.0e+00 >> 0.0e+00 0 0 0 0 0 0 0 0 0 0 19832 >> PCApply 74074 1.0 5.9613e+01 1.2 1.71e+10 1.2 0.0e+00 0.0e+00 >> 0.0e+00 29 30 0 0 0 29 30 0 0 0 58123 >> >> ------------------------------------------------------------------------------------------------------------------------ >> >> Memory usage is given in bytes: >> >> Object Type Creations Destructions Memory Descendants' >> Mem. >> Reports information only for process 0. >> >> --- Event Stage 0: Main Stage >> >> Krylov Solver 2 2 19576 0. >> DMKSP interface 1 1 656 0. >> Vector 1043 1043 42492328 0. >> Vector Scatter 2 2 41496 0. >> Matrix 4 4 3163588 0. >> Distributed Mesh 1 1 5080 0. >> Star Forest Bipartite Graph 2 2 1728 0. >> Discrete System 1 1 872 0. >> Index Set 7 7 71796 0. >> IS L to G Mapping 1 1 28068 0. >> Preconditioner 2 2 1912 0. >> Viewer 1 0 0 0. >> >> ======================================================================================================================== >> Average time to get PetscTime(): 1.90735e-07 >> Average time for MPI_Barrier(): 0.000184202 >> Average time for zero size MPI_Send(): 1.03469e-05 >> #PETSc Option Table entries: >> -log_summary >> #End of PETSc Option Table entries >> Compiled without FORTRAN kernels >> Compiled with full precision matrices (default) >> sizeof(short) 2 sizeof(int) 4 sizeof(long) 8 sizeof(void*) 8 >> sizeof(PetscScalar) 8 sizeof(PetscInt) 4 >> Configure options: --download-f2cblaslapack --with-fc=0 >> --with-debugging=0 COPTFLAGS=-O3 CXXOPTFLAGS=-O3 >> >> >> Regarding Matt's answer: It's generally a rectangular grid (3D) of >> predetermined size (not necessarily a cube). Additionally, objects of >> arbitrary shape can be defined by Dirichlet boundary conditions. Is >> geometric MG still viable? >> >> Thanks, >> Michael >> >> >> >> Am 03.06.2016 um 14:32 schrieb Matthew Knepley: >> >> On Fri, Jun 3, 2016 at 5:56 AM, Dave May < >> dave.mayhem23 at gmail.com> wrote: >> >>> On 3 June 2016 at 11:37, Michael Becker < >>> >>> Michael.Becker at physik.uni-giessen.de> wrote: >>> >>>> Dear all, >>>> >>>> I have a few questions regarding possible performance enhancements for >>>> the PETSc solver I included in my project. >>>> >>>> It's a particle-in-cell plasma simulation written in C++, where >>>> Poisson's equation needs to be solved repeatedly on every timestep. >>>> The simulation domain is discretized using finite differences, so the >>>> solver therefore needs to be able to efficiently solve the linear system A >>>> x = b successively with changing b. The solution x of the previous timestep >>>> is generally a good initial guess for the solution. >>>> >>>> I wrote a class PETScSolver that holds all PETSc objects and necessary >>>> information about domain size and decomposition. To solve the linear >>>> system, two arrays, 'phi' and 'charge', are passed to a member function >>>> solve(), where they are copied to PETSc vectors, and KSPSolve() is called. >>>> After convergence, the solution is then transferred again to the phi array >>>> so that other program parts can use it. >>>> >>>> The matrix is created using DMDA. An array 'bound' is used to determine >>>> whether a node is either a Dirichlet BC or holds a charge. >>>> >>>> I attached three files, petscsolver.h, petscsolver.cpp and main.cpp, >>>> that contain a shortened version of the solver class and a set-up to >>>> initialize and run a simple problem. >>>> >>>> Is there anything I can change to generally make the program run faster? >>>> >>> >>> Before changing anything, you should profile your code to see where time >>> is being spent. >>> >>> To that end, you should compile an optimized build of petsc, link it to >>> you application and run your code with the option -log_summary. The >>> -log_summary flag will generate a performance profile of specific >>> functionality within petsc (KSPSolve, MatMult etc) so you can see where all >>> the time is being spent. >>> >>> As a second round of profiling, you should consider registering specific >>> functionality in your code you think is performance critical. >>> You can do this using the function PetscLogStageRegister() >>> >>> >>> http://www.mcs.anl.gov/petsc/petsc-current/docs/manualpages/Profiling/PetscLogStageRegister.html >>> >>> Check out the examples listed at the bottom of this web page to see how >>> to log stages. Once you've registered stages, these will appear in the >>> report provided by -log_summary >>> >> >> Do everything Dave said. I will also note that since you are using FD, I >> am guessing you are solving on a square. Then >> you should really be using geometric MG. We support this through the DMDA >> object. >> >> Thanks, >> >> Matt >> >> >>> Thanks, >>> Dave >>> >>> >>> And, since I'm rather unexperienced with KSP methods, how do I >>>> efficiently choose PC and KSP? Just by testing every combination? >>>> Would multigrid be a viable option as a pure solver (-ksp_type preonly)? >>>> >>>> Thanks, >>>> Michael >>>> >>> >>> >> >> >> -- >> What most experimenters take for granted before they begin their >> experiments is infinitely more interesting than any results to which their >> experiments lead. >> -- Norbert Wiener >> >> >> > > -------------- next part -------------- An HTML attachment was scrubbed... URL: From Hassan.Raiesi at aero.bombardier.com Tue Jun 7 08:39:05 2016 From: Hassan.Raiesi at aero.bombardier.com (Hassan Raiesi) Date: Tue, 7 Jun 2016 13:39:05 +0000 Subject: [petsc-users] DMPlex import partitioned mesh Message-ID: I'm trying to adapt an in-house CFD code to use DMPlex. I wonder if there is an interface to import an already portioned mesh (unstructured finite volume) into the data structure of DMplex, (i.e a parallel reader) The problem is that the un-partitioned mesh is often too big to be loaded on a single CPU and partitioned by DMplex. I'll appreciate any help, Thank you for your great work developing PETSc! Hassan Raiesi, Ph.D. Advanced Aerodynamics Department Bombardier Aerospace hassan.raiesi at aero.bombardier.com 2351 boul. Alfred-Nobel (BAN1) Ville Saint-Laurent, Qu?bec, H4S 2A9 T?l. 514-855-5001 # 62204 [cid:image001.png at 01D1C09F.77974370] -------------- next part -------------- An HTML attachment was scrubbed... URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: image001.png Type: image/png Size: 6402 bytes Desc: image001.png URL: From fdkong.jd at gmail.com Tue Jun 7 08:46:50 2016 From: fdkong.jd at gmail.com (Fande Kong) Date: Tue, 7 Jun 2016 07:46:50 -0600 Subject: [petsc-users] algorithms for PCGAMG Message-ID: Hi ALL, Are there any papers or documents on the algorithms implemented as PCGAMG? Thanks, Fande, -------------- next part -------------- An HTML attachment was scrubbed... URL: From knepley at gmail.com Tue Jun 7 08:51:38 2016 From: knepley at gmail.com (Matthew Knepley) Date: Tue, 7 Jun 2016 14:51:38 +0100 Subject: [petsc-users] How to refine the Vertex Sets in DMPlex In-Reply-To: <57568F32.6030401@siat.ac.cn> References: <57568F32.6030401@siat.ac.cn> Message-ID: On Tue, Jun 7, 2016 at 10:09 AM, Rongliang Chen wrote: > Dear All, > > I am using the DMRefine_Plex to refine a mesh. In the coarse mesh, it has > a label "Vertex Sets" to mark the boundary nodes. I found that the > DMRefine_Plex did not refine this label. > > For example, in the coarse mesh, there are 100 nodes on the boundary, that > is the number of nodes in the label is 100. In the refined mesh (uniformly > refined), the number of nodes in the label should be larger than 100, but I > found that this number is still 100, which means the newly added nodes on > the boundary were not added to the label. > > But I need a refined label to set the boundary conditions. Anyone can tell > me how to get a refined Vertex Sets label? > All operations are topological in Plex, not geometric. When we refine, we split edges (for instance) and the new vertex inserted inherits the labels from the edge that was split. I am guessing that you only labels the vertices. Thanks, Matt > Best regards, > Rongliang > > -- What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead. -- Norbert Wiener -------------- next part -------------- An HTML attachment was scrubbed... URL: From rl.chen at siat.ac.cn Tue Jun 7 09:05:46 2016 From: rl.chen at siat.ac.cn (Rongliang Chen) Date: Tue, 07 Jun 2016 22:05:46 +0800 Subject: [petsc-users] How to refine the Vertex Sets in DMPlex In-Reply-To: References: <57568F32.6030401@siat.ac.cn> Message-ID: <5756D4BA.5040307@siat.ac.cn> Hi Matt, Thanks for your reply. Yes, I only labels the vertex because I am doing the finite element method where I only need the vertex label. Do you mean that I need to label the faces and get the vertex label from the face label? Thanks, Rongliang On 06/07/2016 09:51 PM, Matthew Knepley wrote: > On Tue, Jun 7, 2016 at 10:09 AM, Rongliang Chen > wrote: > > Dear All, > > I am using the DMRefine_Plex to refine a mesh. In the coarse mesh, > it has a label "Vertex Sets" to mark the boundary nodes. I found > that the DMRefine_Plex did not refine this label. > > For example, in the coarse mesh, there are 100 nodes on the > boundary, that is the number of nodes in the label is 100. In the > refined mesh (uniformly refined), the number of nodes in the label > should be larger than 100, but I found that this number is still > 100, which means the newly added nodes on the boundary were not > added to the label. > > But I need a refined label to set the boundary conditions. Anyone > can tell me how to get a refined Vertex Sets label? > > > All operations are topological in Plex, not geometric. When we refine, > we split edges (for instance) and the new vertex inserted > inherits the labels from the edge that was split. I am guessing that > you only labels the vertices. > > Thanks, > > Matt > > Best regards, > Rongliang > > > > > -- > What most experimenters take for granted before they begin their > experiments is infinitely more interesting than any results to which > their experiments lead. > -- Norbert Wiener -------------- next part -------------- An HTML attachment was scrubbed... URL: From knepley at gmail.com Tue Jun 7 09:06:11 2016 From: knepley at gmail.com (Matthew Knepley) Date: Tue, 7 Jun 2016 15:06:11 +0100 Subject: [petsc-users] How to refine the Vertex Sets in DMPlex In-Reply-To: <5756D4BA.5040307@siat.ac.cn> References: <57568F32.6030401@siat.ac.cn> <5756D4BA.5040307@siat.ac.cn> Message-ID: On Tue, Jun 7, 2016 at 3:05 PM, Rongliang Chen wrote: > Hi Matt, > > Thanks for your reply. > > Yes, I only labels the vertex because I am doing the finite element method > where I only need the vertex label. Do you mean that I need to label the > faces and get the vertex label from the face label? > You need to label vertices and edges. Thanks, Matt > Thanks, > Rongliang > > > > On 06/07/2016 09:51 PM, Matthew Knepley wrote: > > On Tue, Jun 7, 2016 at 10:09 AM, Rongliang Chen > wrote: > >> Dear All, >> >> I am using the DMRefine_Plex to refine a mesh. In the coarse mesh, it has >> a label "Vertex Sets" to mark the boundary nodes. I found that the >> DMRefine_Plex did not refine this label. >> >> For example, in the coarse mesh, there are 100 nodes on the boundary, >> that is the number of nodes in the label is 100. In the refined mesh >> (uniformly refined), the number of nodes in the label should be larger than >> 100, but I found that this number is still 100, which means the newly added >> nodes on the boundary were not added to the label. >> >> But I need a refined label to set the boundary conditions. Anyone can >> tell me how to get a refined Vertex Sets label? >> > > All operations are topological in Plex, not geometric. When we refine, we > split edges (for instance) and the new vertex inserted > inherits the labels from the edge that was split. I am guessing that you > only labels the vertices. > > Thanks, > > Matt > > >> Best regards, >> Rongliang >> >> > > > -- > What most experimenters take for granted before they begin their > experiments is infinitely more interesting than any results to which their > experiments lead. > -- Norbert Wiener > > > -- What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead. -- Norbert Wiener -------------- next part -------------- An HTML attachment was scrubbed... URL: From knepley at gmail.com Tue Jun 7 09:08:04 2016 From: knepley at gmail.com (Matthew Knepley) Date: Tue, 7 Jun 2016 15:08:04 +0100 Subject: [petsc-users] algorithms for PCGAMG In-Reply-To: References: Message-ID: On Tue, Jun 7, 2016 at 2:46 PM, Fande Kong wrote: > Hi ALL, > > Are there any papers or documents on the algorithms implemented as PCGAMG? > I think you can start here: http://dl.acm.org/citation.cfm?id=1049978 Thanks, Matt > Thanks, > > Fande, > -- What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead. -- Norbert Wiener -------------- next part -------------- An HTML attachment was scrubbed... URL: From fdkong.jd at gmail.com Tue Jun 7 09:10:15 2016 From: fdkong.jd at gmail.com (Fande Kong) Date: Tue, 7 Jun 2016 08:10:15 -0600 Subject: [petsc-users] algorithms for PCGAMG In-Reply-To: References: Message-ID: Thanks, Matt, I will go through this paper. Fande, On Tue, Jun 7, 2016 at 8:08 AM, Matthew Knepley wrote: > On Tue, Jun 7, 2016 at 2:46 PM, Fande Kong wrote: > >> Hi ALL, >> >> Are there any papers or documents on the algorithms implemented as PCGAMG? >> > > I think you can start here: http://dl.acm.org/citation.cfm?id=1049978 > > Thanks, > > Matt > > >> Thanks, >> >> Fande, >> > > > > -- > What most experimenters take for granted before they begin their > experiments is infinitely more interesting than any results to which their > experiments lead. > -- Norbert Wiener > -------------- next part -------------- An HTML attachment was scrubbed... URL: From knepley at gmail.com Tue Jun 7 09:10:15 2016 From: knepley at gmail.com (Matthew Knepley) Date: Tue, 7 Jun 2016 15:10:15 +0100 Subject: [petsc-users] DMPlex import partitioned mesh In-Reply-To: References: Message-ID: On Tue, Jun 7, 2016 at 2:39 PM, Hassan Raiesi < Hassan.Raiesi at aero.bombardier.com> wrote: > I?m trying to adapt an in-house CFD code to use DMPlex. I wonder if there > is an interface to import an already portioned mesh (unstructured finite > volume) into the data structure of DMplex, (i.e a parallel reader) > > The problem is that the un-partitioned mesh is often too big to be loaded > on a single CPU and partitioned by DMplex. > Most mesh formats are not well-setup for this kind of read. We have some experimental support for this using a very simple format, see DMPlexCreateFromCellListParallel(). We are working on adapting more complex formats, but figuring out the missing information in parallel is somewhat tricky. It should be finished by the end of the summer. Thanks, Matt > > > I?ll appreciate any help, > > Thank you for your great work developing PETSc! > > > > > > *Hassan Raiesi, Ph.D.* > > Advanced Aerodynamics Department > > Bombardier Aerospace > > > > hassan.raiesi at aero.bombardier.com > > > > *2351 boul. Alfred-Nobel (BAN1)* > > *Ville Saint-Laurent, Qu?bec, H4S 2A9* > > > > > > > > T?l. > > 514-855-5001 # 62204 > > > > > > > > > > > -- What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead. -- Norbert Wiener -------------- next part -------------- An HTML attachment was scrubbed... URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: image001.png Type: image/png Size: 6402 bytes Desc: not available URL: From rl.chen at siat.ac.cn Tue Jun 7 11:18:23 2016 From: rl.chen at siat.ac.cn (Rongliang Chen) Date: Wed, 08 Jun 2016 00:18:23 +0800 Subject: [petsc-users] How to refine the Vertex Sets in DMPlex In-Reply-To: References: <57568F32.6030401@siat.ac.cn> <5756D4BA.5040307@siat.ac.cn> Message-ID: <5756F3CF.3070207@siat.ac.cn> Hi Matt, I know how to label vertex (ex_get_node_set) and face (ex_get_side_set), but do not know how to label the edge for a 3D mesh. Can you give me an example for that? Thanks, Rongliang --------------------- Rongliang Chen, PhD Associate Professor Laboratory for Engineering and Scientific Computing Shenzhen Institutes of Advanced Technology Chinese Academy of Sciences Address: 1068 Xueyuan Avenue, Shenzhen University Town, Shenzhen, Guangdong (518055), P. R. China E-mail: rl.chen at siat.ac.cn Phone: +86-755-86392312 On 06/07/2016 10:06 PM, Matthew Knepley wrote: > On Tue, Jun 7, 2016 at 3:05 PM, Rongliang Chen > wrote: > > Hi Matt, > > Thanks for your reply. > > Yes, I only labels the vertex because I am doing the finite > element method where I only need the vertex label. Do you mean > that I need to label the faces and get the vertex label from the > face label? > > > You need to label vertices and edges. > > Thanks, > > Matt > > Thanks, > Rongliang > > > > On 06/07/2016 09:51 PM, Matthew Knepley wrote: >> On Tue, Jun 7, 2016 at 10:09 AM, Rongliang Chen >> > wrote: >> >> Dear All, >> >> I am using the DMRefine_Plex to refine a mesh. In the coarse >> mesh, it has a label "Vertex Sets" to mark the boundary >> nodes. I found that the DMRefine_Plex did not refine this label. >> >> For example, in the coarse mesh, there are 100 nodes on the >> boundary, that is the number of nodes in the label is 100. In >> the refined mesh (uniformly refined), the number of nodes in >> the label should be larger than 100, but I found that this >> number is still 100, which means the newly added nodes on the >> boundary were not added to the label. >> >> But I need a refined label to set the boundary conditions. >> Anyone can tell me how to get a refined Vertex Sets label? >> >> >> All operations are topological in Plex, not geometric. When we >> refine, we split edges (for instance) and the new vertex inserted >> inherits the labels from the edge that was split. I am guessing >> that you only labels the vertices. >> >> Thanks, >> >> Matt >> >> Best regards, >> Rongliang >> >> >> >> >> -- >> What most experimenters take for granted before they begin their >> experiments is infinitely more interesting than any results to >> which their experiments lead. >> -- Norbert Wiener > > > > > -- > What most experimenters take for granted before they begin their > experiments is infinitely more interesting than any results to which > their experiments lead. > -- Norbert Wiener -------------- next part -------------- An HTML attachment was scrubbed... URL: From knepley at gmail.com Tue Jun 7 12:53:54 2016 From: knepley at gmail.com (Matthew Knepley) Date: Tue, 7 Jun 2016 18:53:54 +0100 Subject: [petsc-users] How to refine the Vertex Sets in DMPlex In-Reply-To: <5756F3CF.3070207@siat.ac.cn> References: <57568F32.6030401@siat.ac.cn> <5756D4BA.5040307@siat.ac.cn> <5756F3CF.3070207@siat.ac.cn> Message-ID: On Tue, Jun 7, 2016 at 5:18 PM, Rongliang Chen wrote: > Hi Matt, > > I know how to label vertex (ex_get_node_set) and face (ex_get_side_set), > but do not know how to label the edge for a 3D mesh. Can you give me an > example for that? > You can label the faces, and then call DMPlexLabelComplete(). Thanks, Matt > Thanks, > Rongliang > > --------------------- > Rongliang Chen, PhD > Associate Professor > > Laboratory for Engineering and Scientific Computing > Shenzhen Institutes of Advanced Technology > Chinese Academy of Sciences > Address: 1068 Xueyuan Avenue, Shenzhen University Town, Shenzhen, Guangdong (518055), P. R. China > E-mail: rl.chen at siat.ac.cn > Phone: +86-755-86392312 > > On 06/07/2016 10:06 PM, Matthew Knepley wrote: > > On Tue, Jun 7, 2016 at 3:05 PM, Rongliang Chen wrote: > >> Hi Matt, >> >> Thanks for your reply. >> >> Yes, I only labels the vertex because I am doing the finite element >> method where I only need the vertex label. Do you mean that I need to label >> the faces and get the vertex label from the face label? >> > > You need to label vertices and edges. > > Thanks, > > Matt > > >> Thanks, >> Rongliang >> >> >> >> On 06/07/2016 09:51 PM, Matthew Knepley wrote: >> >> On Tue, Jun 7, 2016 at 10:09 AM, Rongliang Chen >> wrote: >> >>> Dear All, >>> >>> I am using the DMRefine_Plex to refine a mesh. In the coarse mesh, it >>> has a label "Vertex Sets" to mark the boundary nodes. I found that the >>> DMRefine_Plex did not refine this label. >>> >>> For example, in the coarse mesh, there are 100 nodes on the boundary, >>> that is the number of nodes in the label is 100. In the refined mesh >>> (uniformly refined), the number of nodes in the label should be larger than >>> 100, but I found that this number is still 100, which means the newly added >>> nodes on the boundary were not added to the label. >>> >>> But I need a refined label to set the boundary conditions. Anyone can >>> tell me how to get a refined Vertex Sets label? >>> >> >> All operations are topological in Plex, not geometric. When we refine, we >> split edges (for instance) and the new vertex inserted >> inherits the labels from the edge that was split. I am guessing that you >> only labels the vertices. >> >> Thanks, >> >> Matt >> >> >>> Best regards, >>> Rongliang >>> >>> >> >> >> -- >> What most experimenters take for granted before they begin their >> experiments is infinitely more interesting than any results to which their >> experiments lead. >> -- Norbert Wiener >> >> >> > > > -- > What most experimenters take for granted before they begin their > experiments is infinitely more interesting than any results to which their > experiments lead. > -- Norbert Wiener > > > -- What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead. -- Norbert Wiener -------------- next part -------------- An HTML attachment was scrubbed... URL: From gomer at stanford.edu Tue Jun 7 14:49:33 2016 From: gomer at stanford.edu (Paul Urbanczyk) Date: Tue, 7 Jun 2016 12:49:33 -0700 Subject: [petsc-users] TSSetExactFinalTime Behavior Without TSAdapt In-Reply-To: References: <7b409e70-60fa-a1f2-6dd1-052fdcbb8601@stanford.edu> Message-ID: <5cf95ffc-0f25-63b7-7f9a-0b227c529064@stanford.edu> Hello, See below for my initial code, before adding TSSetExactFinalTime. That version yielded the following error: [0]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [0]PETSC ERROR: Object is in wrong state [0]PETSC ERROR: You must call TSSetExactFinalTime() or use -ts_exact_final_time before calling TSSolve() [0]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [0]PETSC ERROR: Petsc Development GIT revision: v3.7.1-449-g419beca GIT Date: 2016-06-01 15:39:33 -0500 [0]PETSC ERROR: ./urbanSCFD on a arch-linux2-c-debug named prometheus by gomer Tue Jun 7 12:42:05 2016 [0]PETSC ERROR: Configure options [0]PETSC ERROR: #1 TSSolve() line 3946 in /home/gomer/local/petsc/src/ts/interface/ts.c I then added: TSSetExactFinalTime(ts_solver,TS_EXACTFINALTIME_STEPOVER); Running then yielded the following error: [0]PETSC ERROR: ------------------------------------------------------------------------ [0]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, probably memory access out of range [0]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger [0]PETSC ERROR: or see http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind [0]PETSC ERROR: or try http://valgrind.org on GNU/linux and Apple Mac OS X to find memory corruption errors [0]PETSC ERROR: likely location of problem given in stack below [0]PETSC ERROR: --------------------- Stack Frames ------------------------------------ [0]PETSC ERROR: Note: The EXACT line numbers in the stack are not available, [0]PETSC ERROR: INSTEAD the line number of the start of the function [0]PETSC ERROR: is given. [0]PETSC ERROR: [0] TSAdaptChoose line 571 /home/gomer/local/petsc/src/ts/adapt/interface/tsadapt.c [0]PETSC ERROR: [0] TSStep_Euler line 20 /home/gomer/local/petsc/src/ts/impls/explicit/euler/euler.c [0]PETSC ERROR: [0] TSStep line 3707 /home/gomer/local/petsc/src/ts/interface/ts.c [0]PETSC ERROR: [0] TSSolve line 3928 /home/gomer/local/petsc/src/ts/interface/ts.c [0]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [0]PETSC ERROR: Signal received [0]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [0]PETSC ERROR: Petsc Development GIT revision: v3.7.1-449-g419beca GIT Date: 2016-06-01 15:39:33 -0500 [0]PETSC ERROR: ./urbanSCFD on a arch-linux2-c-debug named prometheus by gomer Tue Jun 7 12:44:17 2016 [0]PETSC ERROR: Configure options [0]PETSC ERROR: #1 User provided function() line 0 in unknown file -------------------------------------------------------------------------- Finally, I added TSAdapt ts_adapt; TSGetAdapt(ts_solver,&ts_adapt); TSAdaptSetType(ts_adapt,TSADAPTNONE); After adding this, the program runs without error. Hope that helps. Please let me know if I was doing something wrong before to have caused this. It's not pressing for me, though, as my code now appears to be running ok. -Paul ORIGINAL VERSION WITHOUT TSSetExactFinalTime: void cPETScSolverClass::SolveTSProblem() { if(mpi_main.getRank() == 0) { std::cout << "*****STARTING SOLUTION*****" << std::endl; } // Set up the time-stepping solver object TSCreate(PETSC_COMM_WORLD,&ts_solver); // Set the problem type to be nonlinear TSSetProblemType(ts_solver,TS_NONLINEAR); // Point the solution to the solution vector (vector of conserved variables) TSSetSolution(ts_solver,solver_main.U_cons); // Set the time-stepping type TSSetType(ts_solver,TSEULER); // Set the initial time and the time step TSSetInitialTimeStep(ts_solver,0.0,0.001); // Set the total duration (number of steps and total time) TSSetDuration(ts_solver,10,0.01); // Point the solver to the monitor function TSMonitorSet(ts_solver,solver_main.TS_Monitor,this,NULL); // Set the distributed array context for the solver TSSetDM(ts_solver,main_da); // Get the nonlinear solver for the time-stepping solver TSGetSNES(ts_solver,&nl_solver); // Write out the initial condition before the solver is started WriteSolutionCSV("initial_condition.csv"); // Run the solver! TSSolve(ts_solver,solver_main.U_cons); if(mpi_main.getRank() == 0) { std::cout << "-----COMPLETED SOLUTION-----" << std::endl; } // Write out the solution at the end WriteSolutionCSV("output_test.csv"); // Destroy the time-stepping solver TSDestroy(&ts_solver); } NEW VERSION WITH TSSetExactFinalTime and TSAdaptSetType: void cPETScSolverClass::SolveTSProblem() { if(mpi_main.getRank() == 0) { std::cout << "*****STARTING SOLUTION*****" << std::endl; } // Set up the time-stepping solver object TSCreate(PETSC_COMM_WORLD,&ts_solver); // Set the problem type to be nonlinear TSSetProblemType(ts_solver,TS_NONLINEAR); // Point the solution to the solution vector (vector of conserved variables) TSSetSolution(ts_solver,solver_main.U_cons); // Set the time-stepping type TSSetType(ts_solver,TSEULER); // Set the initial time and the time step TSSetInitialTimeStep(ts_solver,0.0,0.001); // Set the total duration (number of steps and total time) TSSetDuration(ts_solver,1,0.001); // Set TS exact final time behavior TSSetExactFinalTime(ts_solver,TS_EXACTFINALTIME_STEPOVER); // Set TS adaptive time stepping behavior TSAdapt ts_adapt; TSGetAdapt(ts_solver,&ts_adapt); TSAdaptSetType(ts_adapt,TSADAPTNONE); // Point the solver to the function which evaluates the right hand side TSSetRHSFunction(ts_solver,solver_main.RHS,solver_main.FormFunction,this); // Point the solver to the monitor function TSMonitorSet(ts_solver,solver_main.TS_Monitor,this,NULL); // Set the distributed array context for the solver TSSetDM(ts_solver,main_da); // Get the nonlinear solver for the time-stepping solver TSGetSNES(ts_solver,&nl_solver); // Write out the initial condition before the solver is started WriteSolutionCSV("initial_condition.csv"); // Run the solver! TSSolve(ts_solver,solver_main.U_cons); if(mpi_main.getRank() == 0) { std::cout << "-----COMPLETED SOLUTION-----" << std::endl; } // Write out the solution at the end WriteSolutionCSV("output_test.csv"); // Destroy the time-stepping solver TSDestroy(&ts_solver); } On 06/05/2016 06:44 PM, Barry Smith wrote: > Paul, > > I don't think this was an expected change. Can you send code or walk us through the steps that led you to this? > > Barry > > >> On Jun 3, 2016, at 10:23 AM, Paul Urbanczyk wrote: >> >> Hello, >> >> I recently upgraded to the latest version of PETSc (3.7.1) from the git repository. >> >> Running my code gave me an error message about TSSolve being in the wrong state and needing to call TSSetExactFinalTime. >> >> I added this function call with TS_EXACTFINALTIME_STEPOVER, but when I re-ran my code, I got a seg fault and error messages pointing to TSAdaptChoose. >> >> After fiddling around for a while, I found that I now needed to explicitly set the time step adaptation through TSAdaptSetType. >> >> Can anyone confirm that this is so? If so, it might be helpful to note that in documentation or error messages somewhere. >> >> Thanks, >> >> Paul >> >> From bsmith at mcs.anl.gov Tue Jun 7 16:23:04 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Tue, 7 Jun 2016 16:23:04 -0500 Subject: [petsc-users] TSSetExactFinalTime Behavior Without TSAdapt In-Reply-To: <5cf95ffc-0f25-63b7-7f9a-0b227c529064@stanford.edu> References: <7b409e70-60fa-a1f2-6dd1-052fdcbb8601@stanford.edu> <5cf95ffc-0f25-63b7-7f9a-0b227c529064@stanford.edu> Message-ID: <02875465-0B58-4AD4-A320-DF498A19D3C6@mcs.anl.gov> Paul, Ok, I cannot understand this. TSCreate() has a TSGetAdapt() in it in all the 3.7.* releases so it is very odd that you need to set it since it should always be there. I cannot reproduce your problem by modifying a PETSc example. Would you be able to send your code to petsc-maint at mcs.anl.gov that demonstrates the problem otherwise we'll just have mark this problem as a mystery. Barry > On Jun 7, 2016, at 2:49 PM, Paul Urbanczyk wrote: > > Hello, > > See below for my initial code, before adding TSSetExactFinalTime. > > That version yielded the following error: > > [0]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- > [0]PETSC ERROR: Object is in wrong state > [0]PETSC ERROR: You must call TSSetExactFinalTime() or use -ts_exact_final_time before calling TSSolve() > [0]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. > [0]PETSC ERROR: Petsc Development GIT revision: v3.7.1-449-g419beca GIT Date: 2016-06-01 15:39:33 -0500 > [0]PETSC ERROR: ./urbanSCFD on a arch-linux2-c-debug named prometheus by gomer Tue Jun 7 12:42:05 2016 > [0]PETSC ERROR: Configure options > [0]PETSC ERROR: #1 TSSolve() line 3946 in /home/gomer/local/petsc/src/ts/interface/ts.c > > I then added: > > TSSetExactFinalTime(ts_solver,TS_EXACTFINALTIME_STEPOVER); > > Running then yielded the following error: > > [0]PETSC ERROR: ------------------------------------------------------------------------ > [0]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, probably memory access out of range > [0]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger > [0]PETSC ERROR: or see http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind > [0]PETSC ERROR: or try http://valgrind.org on GNU/linux and Apple Mac OS X to find memory corruption errors > [0]PETSC ERROR: likely location of problem given in stack below > [0]PETSC ERROR: --------------------- Stack Frames ------------------------------------ > [0]PETSC ERROR: Note: The EXACT line numbers in the stack are not available, > [0]PETSC ERROR: INSTEAD the line number of the start of the function > [0]PETSC ERROR: is given. > [0]PETSC ERROR: [0] TSAdaptChoose line 571 /home/gomer/local/petsc/src/ts/adapt/interface/tsadapt.c > [0]PETSC ERROR: [0] TSStep_Euler line 20 /home/gomer/local/petsc/src/ts/impls/explicit/euler/euler.c > [0]PETSC ERROR: [0] TSStep line 3707 /home/gomer/local/petsc/src/ts/interface/ts.c > [0]PETSC ERROR: [0] TSSolve line 3928 /home/gomer/local/petsc/src/ts/interface/ts.c > [0]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- > [0]PETSC ERROR: Signal received > [0]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. > [0]PETSC ERROR: Petsc Development GIT revision: v3.7.1-449-g419beca GIT Date: 2016-06-01 15:39:33 -0500 > [0]PETSC ERROR: ./urbanSCFD on a arch-linux2-c-debug named prometheus by gomer Tue Jun 7 12:44:17 2016 > [0]PETSC ERROR: Configure options > [0]PETSC ERROR: #1 User provided function() line 0 in unknown file > -------------------------------------------------------------------------- > > Finally, I added > > TSAdapt ts_adapt; > TSGetAdapt(ts_solver,&ts_adapt); > TSAdaptSetType(ts_adapt,TSADAPTNONE); > > After adding this, the program runs without error. > > Hope that helps. > > Please let me know if I was doing something wrong before to have caused this. It's not pressing for me, though, as my code now appears to be running ok. > > -Paul > > ORIGINAL VERSION WITHOUT TSSetExactFinalTime: > > void cPETScSolverClass::SolveTSProblem() > { > if(mpi_main.getRank() == 0) > { > std::cout << "*****STARTING SOLUTION*****" << std::endl; > } > > // Set up the time-stepping solver object > TSCreate(PETSC_COMM_WORLD,&ts_solver); > > // Set the problem type to be nonlinear > TSSetProblemType(ts_solver,TS_NONLINEAR); > > // Point the solution to the solution vector (vector of conserved variables) > TSSetSolution(ts_solver,solver_main.U_cons); > > // Set the time-stepping type > TSSetType(ts_solver,TSEULER); > > // Set the initial time and the time step > TSSetInitialTimeStep(ts_solver,0.0,0.001); > > // Set the total duration (number of steps and total time) > TSSetDuration(ts_solver,10,0.01); > > // Point the solver to the monitor function > TSMonitorSet(ts_solver,solver_main.TS_Monitor,this,NULL); > > // Set the distributed array context for the solver > TSSetDM(ts_solver,main_da); > > // Get the nonlinear solver for the time-stepping solver > TSGetSNES(ts_solver,&nl_solver); > > // Write out the initial condition before the solver is started > WriteSolutionCSV("initial_condition.csv"); > > // Run the solver! > TSSolve(ts_solver,solver_main.U_cons); > > if(mpi_main.getRank() == 0) > { > std::cout << "-----COMPLETED SOLUTION-----" << std::endl; > } > > // Write out the solution at the end > WriteSolutionCSV("output_test.csv"); > > // Destroy the time-stepping solver > TSDestroy(&ts_solver); > > } > > > NEW VERSION WITH TSSetExactFinalTime and TSAdaptSetType: > > void cPETScSolverClass::SolveTSProblem() > { > if(mpi_main.getRank() == 0) > { > std::cout << "*****STARTING SOLUTION*****" << std::endl; > } > > // Set up the time-stepping solver object > TSCreate(PETSC_COMM_WORLD,&ts_solver); > > // Set the problem type to be nonlinear > TSSetProblemType(ts_solver,TS_NONLINEAR); > > // Point the solution to the solution vector (vector of conserved variables) > TSSetSolution(ts_solver,solver_main.U_cons); > > // Set the time-stepping type > TSSetType(ts_solver,TSEULER); > > // Set the initial time and the time step > TSSetInitialTimeStep(ts_solver,0.0,0.001); > > // Set the total duration (number of steps and total time) > TSSetDuration(ts_solver,1,0.001); > > // Set TS exact final time behavior > TSSetExactFinalTime(ts_solver,TS_EXACTFINALTIME_STEPOVER); > > // Set TS adaptive time stepping behavior > TSAdapt ts_adapt; > TSGetAdapt(ts_solver,&ts_adapt); > TSAdaptSetType(ts_adapt,TSADAPTNONE); > > // Point the solver to the function which evaluates the right hand side > TSSetRHSFunction(ts_solver,solver_main.RHS,solver_main.FormFunction,this); > > // Point the solver to the monitor function > TSMonitorSet(ts_solver,solver_main.TS_Monitor,this,NULL); > > // Set the distributed array context for the solver > TSSetDM(ts_solver,main_da); > > // Get the nonlinear solver for the time-stepping solver > TSGetSNES(ts_solver,&nl_solver); > > // Write out the initial condition before the solver is started > WriteSolutionCSV("initial_condition.csv"); > > // Run the solver! > TSSolve(ts_solver,solver_main.U_cons); > > if(mpi_main.getRank() == 0) > { > std::cout << "-----COMPLETED SOLUTION-----" << std::endl; > } > > // Write out the solution at the end > WriteSolutionCSV("output_test.csv"); > > // Destroy the time-stepping solver > TSDestroy(&ts_solver); > > } > > > On 06/05/2016 06:44 PM, Barry Smith wrote: >> Paul, >> >> I don't think this was an expected change. Can you send code or walk us through the steps that led you to this? >> >> Barry >> >> >>> On Jun 3, 2016, at 10:23 AM, Paul Urbanczyk wrote: >>> >>> Hello, >>> >>> I recently upgraded to the latest version of PETSc (3.7.1) from the git repository. >>> >>> Running my code gave me an error message about TSSolve being in the wrong state and needing to call TSSetExactFinalTime. >>> >>> I added this function call with TS_EXACTFINALTIME_STEPOVER, but when I re-ran my code, I got a seg fault and error messages pointing to TSAdaptChoose. >>> >>> After fiddling around for a while, I found that I now needed to explicitly set the time step adaptation through TSAdaptSetType. >>> >>> Can anyone confirm that this is so? If so, it might be helpful to note that in documentation or error messages somewhere. >>> >>> Thanks, >>> >>> Paul >>> >>> > > From rl.chen at siat.ac.cn Tue Jun 7 19:13:20 2016 From: rl.chen at siat.ac.cn (Rongliang Chen) Date: Wed, 08 Jun 2016 08:13:20 +0800 Subject: [petsc-users] How to refine the Vertex Sets in DMPlex In-Reply-To: References: <57568F32.6030401@siat.ac.cn> <5756D4BA.5040307@siat.ac.cn> <5756F3CF.3070207@siat.ac.cn> Message-ID: <57576320.5050307@siat.ac.cn> Hi Matt, Thank you very much. Best, Rongliang On 06/08/2016 01:53 AM, Matthew Knepley wrote: > On Tue, Jun 7, 2016 at 5:18 PM, Rongliang Chen > wrote: > > Hi Matt, > > I know how to label vertex (ex_get_node_set) and face > (ex_get_side_set), but do not know how to label the edge for a 3D > mesh. Can you give me an example for that? > > > You can label the faces, and then call DMPlexLabelComplete(). > > Thanks, > > Matt > > Thanks, > Rongliang > > --------------------- > Rongliang Chen, PhD > Associate Professor > > Laboratory for Engineering and Scientific Computing > Shenzhen Institutes of Advanced Technology > Chinese Academy of Sciences > Address: 1068 Xueyuan Avenue, Shenzhen University Town, Shenzhen, Guangdong (518055), P. R. China > E-mail:rl.chen at siat.ac.cn > Phone:+86-755-86392312 > > On 06/07/2016 10:06 PM, Matthew Knepley wrote: >> On Tue, Jun 7, 2016 at 3:05 PM, Rongliang Chen >> > wrote: >> >> Hi Matt, >> >> Thanks for your reply. >> >> Yes, I only labels the vertex because I am doing the finite >> element method where I only need the vertex label. Do you >> mean that I need to label the faces and get the vertex label >> from the face label? >> >> >> You need to label vertices and edges. >> >> Thanks, >> >> Matt >> >> Thanks, >> Rongliang >> >> >> >> On 06/07/2016 09:51 PM, Matthew Knepley wrote: >>> On Tue, Jun 7, 2016 at 10:09 AM, Rongliang Chen >>> > wrote: >>> >>> Dear All, >>> >>> I am using the DMRefine_Plex to refine a mesh. In the >>> coarse mesh, it has a label "Vertex Sets" to mark the >>> boundary nodes. I found that the DMRefine_Plex did not >>> refine this label. >>> >>> For example, in the coarse mesh, there are 100 nodes on >>> the boundary, that is the number of nodes in the label >>> is 100. In the refined mesh (uniformly refined), the >>> number of nodes in the label should be larger than 100, >>> but I found that this number is still 100, which means >>> the newly added nodes on the boundary were not added to >>> the label. >>> >>> But I need a refined label to set the boundary >>> conditions. Anyone can tell me how to get a refined >>> Vertex Sets label? >>> >>> >>> All operations are topological in Plex, not geometric. When >>> we refine, we split edges (for instance) and the new vertex >>> inserted >>> inherits the labels from the edge that was split. I am >>> guessing that you only labels the vertices. >>> >>> Thanks, >>> >>> Matt >>> >>> Best regards, >>> Rongliang >>> >>> >>> >>> >>> -- >>> What most experimenters take for granted before they begin >>> their experiments is infinitely more interesting than any >>> results to which their experiments lead. >>> -- Norbert Wiener >> >> >> >> >> -- >> What most experimenters take for granted before they begin their >> experiments is infinitely more interesting than any results to >> which their experiments lead. >> -- Norbert Wiener > > > > > -- > What most experimenters take for granted before they begin their > experiments is infinitely more interesting than any results to which > their experiments lead. > -- Norbert Wiener -------------- next part -------------- An HTML attachment was scrubbed... URL: From rl.chen at siat.ac.cn Tue Jun 7 23:45:56 2016 From: rl.chen at siat.ac.cn (Rongliang Chen) Date: Wed, 08 Jun 2016 12:45:56 +0800 Subject: [petsc-users] How to refine the Vertex Sets in DMPlex In-Reply-To: <57576320.5050307@siat.ac.cn> References: <57568F32.6030401@siat.ac.cn> <5756D4BA.5040307@siat.ac.cn> <5756F3CF.3070207@siat.ac.cn> <57576320.5050307@siat.ac.cn> Message-ID: <5757A304.6030105@siat.ac.cn> Hi Matt, I tried your suggestions but I still can not get the refined Vertex Sets. What I am doing looks like this: ----------------------------------------------------------------------- if (!rank) { DMPlexSetLabelValue(dm, "Vertex Sets", xx, xx) DMPlexSetLabelValue(dm, "Face Sets", xx, xx) } DMPlexDistribute(dm, xx, xx) DMPlexGetStratumIS(dm, "Vertex Sets", xx, &vertexIS) ISGetLocalSize(vertexIS, &numVertexes1) DMRefine(dm, xx) DMPlexGetLabel(dm, "Face Sets", &facelabel) DMPlexLabelComplete(dm, facelabel) DMPlexGetStratumIS(dm, "Vertex Sets", xx, &vertexIS) ISGetLocalSize(vertexIS, &numVertexes2) ------------------------------------------------------------------- I got "numVertexes1 == numVertexes2". But I expect to get "numVertexes2 > numVertexes1". Did I miss something? Thanks, Rongliang On 06/08/2016 08:13 AM, Rongliang Chen wrote: > Hi Matt, > > Thank you very much. > > Best, > Rongliang > > > On 06/08/2016 01:53 AM, Matthew Knepley wrote: >> On Tue, Jun 7, 2016 at 5:18 PM, Rongliang Chen > > wrote: >> >> Hi Matt, >> >> I know how to label vertex (ex_get_node_set) and face >> (ex_get_side_set), but do not know how to label the edge for a 3D >> mesh. Can you give me an example for that? >> >> >> You can label the faces, and then call DMPlexLabelComplete(). >> >> Thanks, >> >> Matt >> >> Thanks, >> Rongliang >> >> --------------------- >> Rongliang Chen, PhD >> Associate Professor >> >> Laboratory for Engineering and Scientific Computing >> Shenzhen Institutes of Advanced Technology >> Chinese Academy of Sciences >> Address: 1068 Xueyuan Avenue, Shenzhen University Town, Shenzhen, Guangdong (518055), P. R. China >> E-mail:rl.chen at siat.ac.cn >> Phone:+86-755-86392312 >> >> On 06/07/2016 10:06 PM, Matthew Knepley wrote: >>> On Tue, Jun 7, 2016 at 3:05 PM, Rongliang Chen >>> > wrote: >>> >>> Hi Matt, >>> >>> Thanks for your reply. >>> >>> Yes, I only labels the vertex because I am doing the finite >>> element method where I only need the vertex label. Do you >>> mean that I need to label the faces and get the vertex label >>> from the face label? >>> >>> >>> You need to label vertices and edges. >>> >>> Thanks, >>> >>> Matt >>> >>> Thanks, >>> Rongliang >>> >>> >>> >>> On 06/07/2016 09:51 PM, Matthew Knepley wrote: >>>> On Tue, Jun 7, 2016 at 10:09 AM, Rongliang Chen >>>> > wrote: >>>> >>>> Dear All, >>>> >>>> I am using the DMRefine_Plex to refine a mesh. In the >>>> coarse mesh, it has a label "Vertex Sets" to mark the >>>> boundary nodes. I found that the DMRefine_Plex did not >>>> refine this label. >>>> >>>> For example, in the coarse mesh, there are 100 nodes on >>>> the boundary, that is the number of nodes in the label >>>> is 100. In the refined mesh (uniformly refined), the >>>> number of nodes in the label should be larger than 100, >>>> but I found that this number is still 100, which means >>>> the newly added nodes on the boundary were not added to >>>> the label. >>>> >>>> But I need a refined label to set the boundary >>>> conditions. Anyone can tell me how to get a refined >>>> Vertex Sets label? >>>> >>>> >>>> All operations are topological in Plex, not geometric. When >>>> we refine, we split edges (for instance) and the new vertex >>>> inserted >>>> inherits the labels from the edge that was split. I am >>>> guessing that you only labels the vertices. >>>> >>>> Thanks, >>>> >>>> Matt >>>> >>>> Best regards, >>>> Rongliang >>>> >>>> >>>> >>>> >>>> -- >>>> What most experimenters take for granted before they begin >>>> their experiments is infinitely more interesting than any >>>> results to which their experiments lead. >>>> -- Norbert Wiener >>> >>> >>> >>> >>> -- >>> What most experimenters take for granted before they begin their >>> experiments is infinitely more interesting than any results to >>> which their experiments lead. >>> -- Norbert Wiener >> >> >> >> >> -- >> What most experimenters take for granted before they begin their >> experiments is infinitely more interesting than any results to which >> their experiments lead. >> -- Norbert Wiener > -------------- next part -------------- An HTML attachment was scrubbed... URL: From lawrence.mitchell at imperial.ac.uk Wed Jun 8 02:46:16 2016 From: lawrence.mitchell at imperial.ac.uk (Lawrence Mitchell) Date: Wed, 8 Jun 2016 09:46:16 +0200 Subject: [petsc-users] How to refine the Vertex Sets in DMPlex In-Reply-To: <5757A304.6030105@siat.ac.cn> References: <57568F32.6030401@siat.ac.cn> <5756D4BA.5040307@siat.ac.cn> <5756F3CF.3070207@siat.ac.cn> <57576320.5050307@siat.ac.cn> <5757A304.6030105@siat.ac.cn> Message-ID: <216D33E7-3615-4EE9-96B5-AD8073EE8FF8@imperial.ac.uk> > On 8 Jun 2016, at 06:45, Rongliang Chen wrote: > > Hi Matt, > > I tried your suggestions but I still can not get the refined Vertex Sets. What I am doing looks like this: > ----------------------------------------------------------------------- > if (!rank) { > DMPlexSetLabelValue(dm, "Vertex Sets", xx, xx) > DMPlexSetLabelValue(dm, "Face Sets", xx, xx) > } > > DMPlexDistribute(dm, xx, xx) > > DMPlexGetStratumIS(dm, "Vertex Sets", xx, &vertexIS) > ISGetLocalSize(vertexIS, &numVertexes1) > > DMRefine(dm, xx) > > DMPlexGetLabel(dm, "Face Sets", &facelabel) > DMPlexLabelComplete(dm, facelabel) There are no points in the transitive closure of the vertices, only the faces, so completion only changes the Face Sets label. If you want to extract the refined DM's vertices and mark them in the Vertex Sets label you need to walk the points marked by the Face Sets label and transfer the values to the Vertex Sets when the point is a vertex. Cheers, Lawrence -------------- next part -------------- A non-text attachment was scrubbed... Name: signature.asc Type: application/pgp-signature Size: 455 bytes Desc: Message signed with OpenPGP using GPGMail URL: From knepley at gmail.com Wed Jun 8 03:36:19 2016 From: knepley at gmail.com (Matthew Knepley) Date: Wed, 8 Jun 2016 09:36:19 +0100 Subject: [petsc-users] How to refine the Vertex Sets in DMPlex In-Reply-To: <5757A304.6030105@siat.ac.cn> References: <57568F32.6030401@siat.ac.cn> <5756D4BA.5040307@siat.ac.cn> <5756F3CF.3070207@siat.ac.cn> <57576320.5050307@siat.ac.cn> <5757A304.6030105@siat.ac.cn> Message-ID: On Wed, Jun 8, 2016 at 5:45 AM, Rongliang Chen wrote: > Hi Matt, > > I tried your suggestions but I still can not get the refined Vertex Sets. > What I am doing looks like this: > ----------------------------------------------------------------------- > if (!rank) { > Put vertices in "Face Sets" instead > DMPlexSetLabelValue(dm, "Vertex Sets", xx, xx) > > DMPlexSetLabelValue(dm, "Face Sets", xx, xx) > // Now it has edges in it DMPlexLabelComplete(dm, "Face Sets"); > } > > DMPlexDistribute(dm, xx, xx) > > DMPlexGetStratumIS(dm, "Vertex Sets", xx, &vertexIS) > ISGetLocalSize(vertexIS, &numVertexes1) > > DMRefine(dm, xx) > > DMPlexGetLabel(dm, "Face Sets", &facelabel) > DMPlexLabelComplete(dm, facelabel) > > DMPlexGetStratumIS(dm, "Vertex Sets", xx, &vertexIS) > ISGetLocalSize(vertexIS, &numVertexes2) > ------------------------------------------------------------------- > > I got "numVertexes1 == numVertexes2". But I expect to get "numVertexes2 > > numVertexes1". Did I miss something? > Matt > Thanks, > Rongliang > > > > On 06/08/2016 08:13 AM, Rongliang Chen wrote: > > Hi Matt, > > Thank you very much. > > Best, > Rongliang > > > On 06/08/2016 01:53 AM, Matthew Knepley wrote: > > On Tue, Jun 7, 2016 at 5:18 PM, Rongliang Chen wrote: > >> Hi Matt, >> >> I know how to label vertex (ex_get_node_set) and face (ex_get_side_set), >> but do not know how to label the edge for a 3D mesh. Can you give me an >> example for that? >> > > You can label the faces, and then call DMPlexLabelComplete(). > > Thanks, > > Matt > > >> Thanks, >> Rongliang >> >> --------------------- >> Rongliang Chen, PhD >> Associate Professor >> >> Laboratory for Engineering and Scientific Computing >> Shenzhen Institutes of Advanced Technology >> Chinese Academy of Sciences >> Address: 1068 Xueyuan Avenue, Shenzhen University Town, Shenzhen, Guangdong (518055), P. R. China >> E-mail: rl.chen at siat.ac.cn >> Phone: +86-755-86392312 >> >> On 06/07/2016 10:06 PM, Matthew Knepley wrote: >> >> On Tue, Jun 7, 2016 at 3:05 PM, Rongliang Chen >> wrote: >> >>> Hi Matt, >>> >>> Thanks for your reply. >>> >>> Yes, I only labels the vertex because I am doing the finite element >>> method where I only need the vertex label. Do you mean that I need to label >>> the faces and get the vertex label from the face label? >>> >> >> You need to label vertices and edges. >> >> Thanks, >> >> Matt >> >> >>> Thanks, >>> Rongliang >>> >>> >>> >>> On 06/07/2016 09:51 PM, Matthew Knepley wrote: >>> >>> On Tue, Jun 7, 2016 at 10:09 AM, Rongliang Chen >>> wrote: >>> >>>> Dear All, >>>> >>>> I am using the DMRefine_Plex to refine a mesh. In the coarse mesh, it >>>> has a label "Vertex Sets" to mark the boundary nodes. I found that the >>>> DMRefine_Plex did not refine this label. >>>> >>>> For example, in the coarse mesh, there are 100 nodes on the boundary, >>>> that is the number of nodes in the label is 100. In the refined mesh >>>> (uniformly refined), the number of nodes in the label should be larger than >>>> 100, but I found that this number is still 100, which means the newly added >>>> nodes on the boundary were not added to the label. >>>> >>>> But I need a refined label to set the boundary conditions. Anyone can >>>> tell me how to get a refined Vertex Sets label? >>>> >>> >>> All operations are topological in Plex, not geometric. When we refine, >>> we split edges (for instance) and the new vertex inserted >>> inherits the labels from the edge that was split. I am guessing that you >>> only labels the vertices. >>> >>> Thanks, >>> >>> Matt >>> >>> >>>> Best regards, >>>> Rongliang >>>> >>>> >>> >>> >>> -- >>> What most experimenters take for granted before they begin their >>> experiments is infinitely more interesting than any results to which their >>> experiments lead. >>> -- Norbert Wiener >>> >>> >>> >> >> >> -- >> What most experimenters take for granted before they begin their >> experiments is infinitely more interesting than any results to which their >> experiments lead. >> -- Norbert Wiener >> >> >> > > > -- > What most experimenters take for granted before they begin their > experiments is infinitely more interesting than any results to which their > experiments lead. > -- Norbert Wiener > > > > -- What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead. -- Norbert Wiener -------------- next part -------------- An HTML attachment was scrubbed... URL: From rl.chen at siat.ac.cn Wed Jun 8 07:22:24 2016 From: rl.chen at siat.ac.cn (Rongliang Chen) Date: Wed, 08 Jun 2016 20:22:24 +0800 Subject: [petsc-users] How to refine the Vertex Sets in DMPlex In-Reply-To: References: <57568F32.6030401@siat.ac.cn> <5756D4BA.5040307@siat.ac.cn> <5756F3CF.3070207@siat.ac.cn> <57576320.5050307@siat.ac.cn> <5757A304.6030105@siat.ac.cn> Message-ID: <57580E00.3060407@siat.ac.cn> Hi Lawrence and Matt, Many thanks for your help. Best regards, Rongliang On 06/08/2016 04:36 PM, Matthew Knepley wrote: > On Wed, Jun 8, 2016 at 5:45 AM, Rongliang Chen > wrote: > > Hi Matt, > > I tried your suggestions but I still can not get the refined > Vertex Sets. What I am doing looks like this: > ----------------------------------------------------------------------- > if (!rank) { > > > Put vertices in "Face Sets" instead > > DMPlexSetLabelValue(dm, "Vertex Sets", xx, xx) > > DMPlexSetLabelValue(dm, "Face Sets", xx, xx) > > // Now it has edges in it > DMPlexLabelComplete(dm, "Face Sets"); > > } > > DMPlexDistribute(dm, xx, xx) > > DMPlexGetStratumIS(dm, "Vertex Sets", xx, &vertexIS) > ISGetLocalSize(vertexIS, &numVertexes1) > > DMRefine(dm, xx) > > DMPlexGetLabel(dm, "Face Sets", &facelabel) > DMPlexLabelComplete(dm, facelabel) > > DMPlexGetStratumIS(dm, "Vertex Sets", xx, &vertexIS) > ISGetLocalSize(vertexIS, &numVertexes2) > ------------------------------------------------------------------- > > I got "numVertexes1 == numVertexes2". But I expect to get > "numVertexes2 > numVertexes1". Did I miss something? > > > Matt > > Thanks, > Rongliang > > > > On 06/08/2016 08:13 AM, Rongliang Chen wrote: >> Hi Matt, >> >> Thank you very much. >> >> Best, >> Rongliang >> >> >> On 06/08/2016 01:53 AM, Matthew Knepley wrote: >>> On Tue, Jun 7, 2016 at 5:18 PM, Rongliang Chen >>> > wrote: >>> >>> Hi Matt, >>> >>> I know how to label vertex (ex_get_node_set) and face >>> (ex_get_side_set), but do not know how to label the edge for >>> a 3D mesh. Can you give me an example for that? >>> >>> >>> You can label the faces, and then call DMPlexLabelComplete(). >>> >>> Thanks, >>> >>> Matt >>> >>> Thanks, >>> Rongliang >>> >>> --------------------- >>> Rongliang Chen, PhD >>> Associate Professor >>> >>> Laboratory for Engineering and Scientific Computing >>> Shenzhen Institutes of Advanced Technology >>> Chinese Academy of Sciences >>> Address: 1068 Xueyuan Avenue, Shenzhen University Town, Shenzhen, Guangdong (518055), P. R. China >>> E-mail:rl.chen at siat.ac.cn >>> Phone:+86-755-86392312 >>> >>> On 06/07/2016 10:06 PM, Matthew Knepley wrote: >>>> On Tue, Jun 7, 2016 at 3:05 PM, Rongliang Chen >>>> > wrote: >>>> >>>> Hi Matt, >>>> >>>> Thanks for your reply. >>>> >>>> Yes, I only labels the vertex because I am doing the >>>> finite element method where I only need the vertex >>>> label. Do you mean that I need to label the faces and >>>> get the vertex label from the face label? >>>> >>>> >>>> You need to label vertices and edges. >>>> >>>> Thanks, >>>> >>>> Matt >>>> >>>> Thanks, >>>> Rongliang >>>> >>>> >>>> >>>> On 06/07/2016 09:51 PM, Matthew Knepley wrote: >>>>> On Tue, Jun 7, 2016 at 10:09 AM, Rongliang Chen >>>>> > wrote: >>>>> >>>>> Dear All, >>>>> >>>>> I am using the DMRefine_Plex to refine a mesh. In >>>>> the coarse mesh, it has a label "Vertex Sets" to >>>>> mark the boundary nodes. I found that the >>>>> DMRefine_Plex did not refine this label. >>>>> >>>>> For example, in the coarse mesh, there are 100 >>>>> nodes on the boundary, that is the number of nodes >>>>> in the label is 100. In the refined mesh >>>>> (uniformly refined), the number of nodes in the >>>>> label should be larger than 100, but I found that >>>>> this number is still 100, which means the newly >>>>> added nodes on the boundary were not added to the >>>>> label. >>>>> >>>>> But I need a refined label to set the boundary >>>>> conditions. Anyone can tell me how to get a >>>>> refined Vertex Sets label? >>>>> >>>>> >>>>> All operations are topological in Plex, not geometric. >>>>> When we refine, we split edges (for instance) and the >>>>> new vertex inserted >>>>> inherits the labels from the edge that was split. I am >>>>> guessing that you only labels the vertices. >>>>> >>>>> Thanks, >>>>> >>>>> Matt >>>>> >>>>> Best regards, >>>>> Rongliang >>>>> >>>>> >>>>> >>>>> >>>>> -- >>>>> What most experimenters take for granted before they >>>>> begin their experiments is infinitely more interesting >>>>> than any results to which their experiments lead. >>>>> -- Norbert Wiener >>>> >>>> >>>> >>>> >>>> -- >>>> What most experimenters take for granted before they begin >>>> their experiments is infinitely more interesting than any >>>> results to which their experiments lead. >>>> -- Norbert Wiener >>> >>> >>> >>> >>> -- >>> What most experimenters take for granted before they begin their >>> experiments is infinitely more interesting than any results to >>> which their experiments lead. >>> -- Norbert Wiener >> > > > > > -- > What most experimenters take for granted before they begin their > experiments is infinitely more interesting than any results to which > their experiments lead. > -- Norbert Wiener -------------- next part -------------- An HTML attachment was scrubbed... URL: From xzhao99 at gmail.com Wed Jun 8 11:41:51 2016 From: xzhao99 at gmail.com (Xujun Zhao) Date: Wed, 8 Jun 2016 11:41:51 -0500 Subject: [petsc-users] KSPSolve errors on blues Message-ID: Hi all, I am running a FE Stokes Solver with schur complement type PC on blues. The program runs well when mesh is 40X40X40 (0.88M dofs), but when I use 60X60X60 mesh, the program crashes and gives out some errors, which looks like a segmentation fault. The "strange" thing is that it runs well with 1CPU, 2CPUs, but fails on 4 or 8 CPUs. The log files are also attached. It seems like the global matrix and vector are assembled well, and errors come out before calling the KSPSolve(). btw, I use the recent PETSc 3.7 dbg version. for libMesh I use both dbg and opt version, but none of those can give useful information. Has anyone met such situations before? Many thinks. -------------- next part -------------- An HTML attachment was scrubbed... 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URL: From bsmith at mcs.anl.gov Wed Jun 8 11:51:02 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Wed, 8 Jun 2016 11:51:02 -0500 Subject: [petsc-users] KSPSolve errors on blues In-Reply-To: References: Message-ID: Signal 9 SIGKILL on batch systems usually means the process was killed because it ran out of time or ran out of memory. Perhaps there is something in the code that is unscalable and requires more more memory with more processes. You can run on 1 2 and 3 processes and measure the memory usage to see if it goes up with the number of processes using for example -memory_view Barry > On Jun 8, 2016, at 11:41 AM, Xujun Zhao wrote: > > Hi all, > > I am running a FE Stokes Solver with schur complement type PC on blues. The program runs well when mesh is 40X40X40 (0.88M dofs), but when I use 60X60X60 mesh, the program crashes and gives out some errors, which looks like a segmentation fault. The "strange" thing is that it runs well with 1CPU, 2CPUs, but fails on 4 or 8 CPUs. The log files are also attached. It seems like the global matrix and vector are assembled well, and errors come out before calling the KSPSolve(). > > btw, I use the recent PETSc 3.7 dbg version. for libMesh I use both dbg and opt version, but none of those can give useful information. Has anyone met such situations before? Many thinks. > From xzhao99 at gmail.com Wed Jun 8 13:30:11 2016 From: xzhao99 at gmail.com (Xujun Zhao) Date: Wed, 8 Jun 2016 13:30:11 -0500 Subject: [petsc-users] KSPSolve errors on blues In-Reply-To: References: Message-ID: A quick test of a smaller system on my laptop with 25x25x25 mesh gives the following info. The memory used keeps increasing from 1 to 3 CPUs, but slightly decreases with 4 CPUs. On the other hand, 60x60x60 mesh (2.9M dofs) is also not a big system... ------------------------------------------------- 1 CPU ------------------------------------------------- Summary of Memory Usage in PETSc Maximum (over computational time) process memory: total 4.7054e+09 max 4.7054e+09 min 4.7054e+09 Current process memory: total 4.7054e+09 max 4.7054e+09 min 4.7054e+09 Maximum (over computational time) space PetscMalloc()ed: total 1.6151e+09 max 1.6151e+09 min 1.6151e+09 Current space PetscMalloc()ed: total 7.7232e+04 max 7.7232e+04 min 7.7232e+04 ------------------------------------------------- 2 CPU ------------------------------------------------- Summary of Memory Usage in PETSc Maximum (over computational time) process memory: total 6.2389e+09 max 3.1275e+09 min 3.1113e+09 Current process memory: total 6.2389e+09 max 3.1275e+09 min 3.1113e+09 Maximum (over computational time) space PetscMalloc()ed: total 2.1589e+09 max 1.1193e+09 min 1.0397e+09 Current space PetscMalloc()ed: total 1.5446e+05 max 7.7232e+04 min 7.7232e+04 ------------------------------------------------- 3 CPU ------------------------------------------------- Summary of Memory Usage in PETSc Maximum (over computational time) process memory: total 7.7116e+09 max 1.9572e+09 min 1.8715e+09 Current process memory: total 7.7116e+09 max 1.9572e+09 min 1.8715e+09 Maximum (over computational time) space PetscMalloc()ed: total 2.1754e+09 max 5.8450e+08 min 5.0516e+08 Current space PetscMalloc()ed: total 3.0893e+05 max 7.7232e+04 min 7.7232e+04 ------------------------------------------------- 4 CPU ------------------------------------------------- Summary of Memory Usage in PETSc Maximum (over computational time) process memory: total 7.1188e+09 max 2.4651e+09 min 2.2909e+09 Current process memory: total 7.1188e+09 max 2.4651e+09 min 2.2909e+09 Maximum (over computational time) space PetscMalloc()ed: total 2.1750e+09 max 7.6982e+08 min 6.5289e+08 Current space PetscMalloc()ed: total 2.3170e+05 max 7.7232e+04 min 7.7232e+04 On Wed, Jun 8, 2016 at 11:51 AM, Barry Smith wrote: > > Signal 9 SIGKILL on batch systems usually means the process was killed > because it ran out of time or ran out of memory. > > Perhaps there is something in the code that is unscalable and requires > more more memory with more processes. You can run on 1 2 and 3 processes > and measure the memory usage to see if it goes up with the number of > processes using for example -memory_view > > Barry > > > > > On Jun 8, 2016, at 11:41 AM, Xujun Zhao wrote: > > > > Hi all, > > > > I am running a FE Stokes Solver with schur complement type PC on blues. > The program runs well when mesh is 40X40X40 (0.88M dofs), but when I use > 60X60X60 mesh, the program crashes and gives out some errors, which looks > like a segmentation fault. The "strange" thing is that it runs well with > 1CPU, 2CPUs, but fails on 4 or 8 CPUs. The log files are also attached. It > seems like the global matrix and vector are assembled well, and errors come > out before calling the KSPSolve(). > > > > btw, I use the recent PETSc 3.7 dbg version. for libMesh I use both dbg > and opt version, but none of those can give useful information. Has anyone > met such situations before? Many thinks. > > > > -------------- next part -------------- An HTML attachment was scrubbed... URL: From bsmith at mcs.anl.gov Wed Jun 8 13:40:11 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Wed, 8 Jun 2016 13:40:11 -0500 Subject: [petsc-users] KSPSolve errors on blues In-Reply-To: References: Message-ID: <08D69A43-29A0-4037-9780-6DD95C59249B@mcs.anl.gov> > On Jun 8, 2016, at 1:30 PM, Xujun Zhao wrote: > > A quick test of a smaller system on my laptop with 25x25x25 mesh gives the following info. > The memory used keeps increasing from 1 to 3 CPUs, but slightly decreases with 4 CPUs. yes this does not look problematic > On the other hand, 60x60x60 mesh (2.9M dofs) is also not a big system... True. I think you need to run the 60 60 60 system also on 1 2 4 and 8 processes to see how the memory trends. I don't think we should eliminate memory as the culprit yet. Barry > > > ------------------------------------------------- 1 CPU ------------------------------------------------- > Summary of Memory Usage in PETSc > Maximum (over computational time) process memory: total 4.7054e+09 max 4.7054e+09 min 4.7054e+09 > Current process memory: total 4.7054e+09 max 4.7054e+09 min 4.7054e+09 > Maximum (over computational time) space PetscMalloc()ed: total 1.6151e+09 max 1.6151e+09 min 1.6151e+09 > Current space PetscMalloc()ed: total 7.7232e+04 max 7.7232e+04 min 7.7232e+04 > > ------------------------------------------------- 2 CPU ------------------------------------------------- > Summary of Memory Usage in PETSc > Maximum (over computational time) process memory: total 6.2389e+09 max 3.1275e+09 min 3.1113e+09 > Current process memory: total 6.2389e+09 max 3.1275e+09 min 3.1113e+09 > Maximum (over computational time) space PetscMalloc()ed: total 2.1589e+09 max 1.1193e+09 min 1.0397e+09 > Current space PetscMalloc()ed: total 1.5446e+05 max 7.7232e+04 min 7.7232e+04 > > ------------------------------------------------- 3 CPU ------------------------------------------------- > Summary of Memory Usage in PETSc > Maximum (over computational time) process memory: total 7.7116e+09 max 1.9572e+09 min 1.8715e+09 > Current process memory: total 7.7116e+09 max 1.9572e+09 min 1.8715e+09 > Maximum (over computational time) space PetscMalloc()ed: total 2.1754e+09 max 5.8450e+08 min 5.0516e+08 > Current space PetscMalloc()ed: total 3.0893e+05 max 7.7232e+04 min 7.7232e+04 > > ------------------------------------------------- 4 CPU ------------------------------------------------- > Summary of Memory Usage in PETSc > Maximum (over computational time) process memory: total 7.1188e+09 max 2.4651e+09 min 2.2909e+09 > Current process memory: total 7.1188e+09 max 2.4651e+09 min 2.2909e+09 > Maximum (over computational time) space PetscMalloc()ed: total 2.1750e+09 max 7.6982e+08 min 6.5289e+08 > Current space PetscMalloc()ed: total 2.3170e+05 max 7.7232e+04 min 7.7232e+04 > > > On Wed, Jun 8, 2016 at 11:51 AM, Barry Smith wrote: > > Signal 9 SIGKILL on batch systems usually means the process was killed because it ran out of time or ran out of memory. > > Perhaps there is something in the code that is unscalable and requires more more memory with more processes. You can run on 1 2 and 3 processes and measure the memory usage to see if it goes up with the number of processes using for example -memory_view > > Barry > > > > > On Jun 8, 2016, at 11:41 AM, Xujun Zhao wrote: > > > > Hi all, > > > > I am running a FE Stokes Solver with schur complement type PC on blues. The program runs well when mesh is 40X40X40 (0.88M dofs), but when I use 60X60X60 mesh, the program crashes and gives out some errors, which looks like a segmentation fault. The "strange" thing is that it runs well with 1CPU, 2CPUs, but fails on 4 or 8 CPUs. The log files are also attached. It seems like the global matrix and vector are assembled well, and errors come out before calling the KSPSolve(). > > > > btw, I use the recent PETSc 3.7 dbg version. for libMesh I use both dbg and opt version, but none of those can give useful information. Has anyone met such situations before? Many thinks. > > > > From fdkong.jd at gmail.com Wed Jun 8 14:31:10 2016 From: fdkong.jd at gmail.com (Fande Kong) Date: Wed, 8 Jun 2016 13:31:10 -0600 Subject: [petsc-users] fgmres does not support left preconditioner Message-ID: Hi all, Any reasons to let fgmres do not support left preconditioner? In theory, fgmres should with left preconditioner. Please correct me, if I am wrong. Fande Kong, [0]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [0]PETSC ERROR: No support for this operation for this object type [0]PETSC ERROR: KSP fgmres does not support LEFT [0]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [0]PETSC ERROR: Petsc Release Version 3.6.2, unknown [0]PETSC ERROR: ./heartfsi on a arch-darwin-cxx-opt named LiviadeMacBook-Pro.local by livia Wed Jun 8 12:19:07 2016 [0]PETSC ERROR: Configure options --with-clanguage=cxx --with-shared-libraries=1 --download-fblaslapack=1 --with-mpi-dir=/Users/livia/math/mpich-3.1_install --download-parmetis=1 --download-metis=1 --download-netcdf=1 --download-exodusii=1 --download-hdf5=1 --with-debugging=no --with-c2html=0 --download-hypre=1 --download-superlu_dist=1 --with-64-bit-indices=1 [0]PETSC ERROR: #1 KSPSetUpNorms_Private() line 418 in /Users/livia/math/petsc/src/ksp/ksp/interface/itcreate.c [0]PETSC ERROR: #2 KSPSetUp() line 256 in /Users/livia/math/petsc/src/ksp/ksp/interface/itfunc.c [0]PETSC ERROR: #3 KSPSolve() line 546 in /Users/livia/math/petsc/src/ksp/ksp/interface/itfunc.c [0]PETSC ERROR: #4 SNESSolve_NEWTONLS() line 233 in /Users/livia/math/petsc/src/snes/impls/ls/ls.c [0]PETSC ERROR: #5 SNESSolve() line 3906 in /Users/livia/math/petsc/src/snes/interface/snes.c [0]PETSC ERROR: #6 TimeStepperSolve() line 376 in /Users/livia/math/spmcs/src/application/heartfsi/timestepper.cpp [0]PETSC ERROR: #7 main() line 68 in /Users/livia/math/spmcs/src/application/heartfsi/fluidstructureinteraction.cpp -------------- next part -------------- An HTML attachment was scrubbed... URL: From xzhao99 at gmail.com Wed Jun 8 16:08:47 2016 From: xzhao99 at gmail.com (Xujun Zhao) Date: Wed, 8 Jun 2016 16:08:47 -0500 Subject: [petsc-users] KSPSolve errors on blues In-Reply-To: <08D69A43-29A0-4037-9780-6DD95C59249B@mcs.anl.gov> References: <08D69A43-29A0-4037-9780-6DD95C59249B@mcs.anl.gov> Message-ID: Barry, Thank you. I am testing on the blues. btw, what do they mean for the different types of memory usage? for example, below is the summary of mem usage for 60x60x60(with 2.9M dofs). The max process memory is 3 times as the max space PetscMalloc()ed. Summary of Memory Usage in PETSc Maximum (over computational time) process memory: total 1.0930e+11 max 5.6928e+10 min 5.2376e+10 Current process memory: total 3.1762e+09 max 2.8804e+09 min 2.9583e+08 Maximum (over computational time) space PetscMalloc()ed: total 3.0071e+10 max 1.5286e+10 min 1.4785e+10 Current space PetscMalloc()ed: total 1.5453e+05 max 7.7264e+04 min 7.7264e+04 On Wed, Jun 8, 2016 at 1:40 PM, Barry Smith wrote: > > > On Jun 8, 2016, at 1:30 PM, Xujun Zhao wrote: > > > > A quick test of a smaller system on my laptop with 25x25x25 mesh gives > the following info. > > The memory used keeps increasing from 1 to 3 CPUs, but slightly > decreases with 4 CPUs. > > yes this does not look problematic > > > On the other hand, 60x60x60 mesh (2.9M dofs) is also not a big system... > > True. > > I think you need to run the 60 60 60 system also on 1 2 4 and 8 > processes to see how the memory trends. I don't think we should eliminate > memory as the culprit yet. > > > Barry > > > > > > > ------------------------------------------------- 1 CPU > ------------------------------------------------- > > Summary of Memory Usage in PETSc > > Maximum (over computational time) process memory: total > 4.7054e+09 max 4.7054e+09 min 4.7054e+09 > > Current process memory: > total 4.7054e+09 max 4.7054e+09 min 4.7054e+09 > > Maximum (over computational time) space PetscMalloc()ed: total > 1.6151e+09 max 1.6151e+09 min 1.6151e+09 > > Current space PetscMalloc()ed: > total 7.7232e+04 max 7.7232e+04 min 7.7232e+04 > > > > ------------------------------------------------- 2 CPU > ------------------------------------------------- > > Summary of Memory Usage in PETSc > > Maximum (over computational time) process memory: total > 6.2389e+09 max 3.1275e+09 min 3.1113e+09 > > Current process memory: > total 6.2389e+09 max 3.1275e+09 min 3.1113e+09 > > Maximum (over computational time) space PetscMalloc()ed: total > 2.1589e+09 max 1.1193e+09 min 1.0397e+09 > > Current space PetscMalloc()ed: > total 1.5446e+05 max 7.7232e+04 min 7.7232e+04 > > > > ------------------------------------------------- 3 CPU > ------------------------------------------------- > > Summary of Memory Usage in PETSc > > Maximum (over computational time) process memory: total > 7.7116e+09 max 1.9572e+09 min 1.8715e+09 > > Current process memory: > total 7.7116e+09 max 1.9572e+09 min 1.8715e+09 > > Maximum (over computational time) space PetscMalloc()ed: total > 2.1754e+09 max 5.8450e+08 min 5.0516e+08 > > Current space PetscMalloc()ed: > total 3.0893e+05 max 7.7232e+04 min 7.7232e+04 > > > > ------------------------------------------------- 4 CPU > ------------------------------------------------- > > Summary of Memory Usage in PETSc > > Maximum (over computational time) process memory: total > 7.1188e+09 max 2.4651e+09 min 2.2909e+09 > > Current process memory: > total 7.1188e+09 max 2.4651e+09 min 2.2909e+09 > > Maximum (over computational time) space PetscMalloc()ed: total > 2.1750e+09 max 7.6982e+08 min 6.5289e+08 > > Current space PetscMalloc()ed: > total 2.3170e+05 max 7.7232e+04 min 7.7232e+04 > > > > > > On Wed, Jun 8, 2016 at 11:51 AM, Barry Smith wrote: > > > > Signal 9 SIGKILL on batch systems usually means the process was > killed because it ran out of time or ran out of memory. > > > > Perhaps there is something in the code that is unscalable and > requires more more memory with more processes. You can run on 1 2 and 3 > processes and measure the memory usage to see if it goes up with the number > of processes using for example -memory_view > > > > Barry > > > > > > > > > On Jun 8, 2016, at 11:41 AM, Xujun Zhao wrote: > > > > > > Hi all, > > > > > > I am running a FE Stokes Solver with schur complement type PC on > blues. The program runs well when mesh is 40X40X40 (0.88M dofs), but when I > use 60X60X60 mesh, the program crashes and gives out some errors, which > looks like a segmentation fault. The "strange" thing is that it runs well > with 1CPU, 2CPUs, but fails on 4 or 8 CPUs. The log files are also > attached. It seems like the global matrix and vector are assembled well, > and errors come out before calling the KSPSolve(). > > > > > > btw, I use the recent PETSc 3.7 dbg version. for libMesh I use both > dbg and opt version, but none of those can give useful information. Has > anyone met such situations before? Many thinks. > > > > > > > > > -------------- next part -------------- An HTML attachment was scrubbed... URL: From bsmith at mcs.anl.gov Wed Jun 8 16:18:42 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Wed, 8 Jun 2016 16:18:42 -0500 Subject: [petsc-users] KSPSolve errors on blues In-Reply-To: References: <08D69A43-29A0-4037-9780-6DD95C59249B@mcs.anl.gov> Message-ID: > On Jun 8, 2016, at 4:08 PM, Xujun Zhao wrote: > > Barry, > > Thank you. I am testing on the blues. > btw, what do they mean for the different types of memory usage? for example, below is the summary of mem usage for 60x60x60(with 2.9M dofs). The max process memory is 3 times as the max space PetscMalloc()ed. PetscMalloced is basically the PETSc data structures; Process memory is size of the program plus PETSc malloced space plus space allocated by any other library, in this case libMesh. It looks like libMesh is requiring a lot of space? Barry > > Summary of Memory Usage in PETSc > Maximum (over computational time) process memory: total 1.0930e+11 max 5.6928e+10 min 5.2376e+10 > Current process memory: total 3.1762e+09 max 2.8804e+09 min 2.9583e+08 > Maximum (over computational time) space PetscMalloc()ed: total 3.0071e+10 max 1.5286e+10 min 1.4785e+10 > Current space PetscMalloc()ed: total 1.5453e+05 max 7.7264e+04 min 7.7264e+04 > > > > On Wed, Jun 8, 2016 at 1:40 PM, Barry Smith wrote: > > > On Jun 8, 2016, at 1:30 PM, Xujun Zhao wrote: > > > > A quick test of a smaller system on my laptop with 25x25x25 mesh gives the following info. > > The memory used keeps increasing from 1 to 3 CPUs, but slightly decreases with 4 CPUs. > > yes this does not look problematic > > > On the other hand, 60x60x60 mesh (2.9M dofs) is also not a big system... > > True. > > I think you need to run the 60 60 60 system also on 1 2 4 and 8 processes to see how the memory trends. I don't think we should eliminate memory as the culprit yet. > > > Barry > > > > > > > ------------------------------------------------- 1 CPU ------------------------------------------------- > > Summary of Memory Usage in PETSc > > Maximum (over computational time) process memory: total 4.7054e+09 max 4.7054e+09 min 4.7054e+09 > > Current process memory: total 4.7054e+09 max 4.7054e+09 min 4.7054e+09 > > Maximum (over computational time) space PetscMalloc()ed: total 1.6151e+09 max 1.6151e+09 min 1.6151e+09 > > Current space PetscMalloc()ed: total 7.7232e+04 max 7.7232e+04 min 7.7232e+04 > > > > ------------------------------------------------- 2 CPU ------------------------------------------------- > > Summary of Memory Usage in PETSc > > Maximum (over computational time) process memory: total 6.2389e+09 max 3.1275e+09 min 3.1113e+09 > > Current process memory: total 6.2389e+09 max 3.1275e+09 min 3.1113e+09 > > Maximum (over computational time) space PetscMalloc()ed: total 2.1589e+09 max 1.1193e+09 min 1.0397e+09 > > Current space PetscMalloc()ed: total 1.5446e+05 max 7.7232e+04 min 7.7232e+04 > > > > ------------------------------------------------- 3 CPU ------------------------------------------------- > > Summary of Memory Usage in PETSc > > Maximum (over computational time) process memory: total 7.7116e+09 max 1.9572e+09 min 1.8715e+09 > > Current process memory: total 7.7116e+09 max 1.9572e+09 min 1.8715e+09 > > Maximum (over computational time) space PetscMalloc()ed: total 2.1754e+09 max 5.8450e+08 min 5.0516e+08 > > Current space PetscMalloc()ed: total 3.0893e+05 max 7.7232e+04 min 7.7232e+04 > > > > ------------------------------------------------- 4 CPU ------------------------------------------------- > > Summary of Memory Usage in PETSc > > Maximum (over computational time) process memory: total 7.1188e+09 max 2.4651e+09 min 2.2909e+09 > > Current process memory: total 7.1188e+09 max 2.4651e+09 min 2.2909e+09 > > Maximum (over computational time) space PetscMalloc()ed: total 2.1750e+09 max 7.6982e+08 min 6.5289e+08 > > Current space PetscMalloc()ed: total 2.3170e+05 max 7.7232e+04 min 7.7232e+04 > > > > > > On Wed, Jun 8, 2016 at 11:51 AM, Barry Smith wrote: > > > > Signal 9 SIGKILL on batch systems usually means the process was killed because it ran out of time or ran out of memory. > > > > Perhaps there is something in the code that is unscalable and requires more more memory with more processes. You can run on 1 2 and 3 processes and measure the memory usage to see if it goes up with the number of processes using for example -memory_view > > > > Barry > > > > > > > > > On Jun 8, 2016, at 11:41 AM, Xujun Zhao wrote: > > > > > > Hi all, > > > > > > I am running a FE Stokes Solver with schur complement type PC on blues. The program runs well when mesh is 40X40X40 (0.88M dofs), but when I use 60X60X60 mesh, the program crashes and gives out some errors, which looks like a segmentation fault. The "strange" thing is that it runs well with 1CPU, 2CPUs, but fails on 4 or 8 CPUs. The log files are also attached. It seems like the global matrix and vector are assembled well, and errors come out before calling the KSPSolve(). > > > > > > btw, I use the recent PETSc 3.7 dbg version. for libMesh I use both dbg and opt version, but none of those can give useful information. Has anyone met such situations before? Many thinks. > > > > > > > > > From xzhao99 at gmail.com Wed Jun 8 16:29:56 2016 From: xzhao99 at gmail.com (Xujun Zhao) Date: Wed, 8 Jun 2016 16:29:56 -0500 Subject: [petsc-users] KSPSolve errors on blues In-Reply-To: References: <08D69A43-29A0-4037-9780-6DD95C59249B@mcs.anl.gov> Message-ID: OK, this makes sense. Now my libMesh code use SerialMesh, which keeps a copy on each processor, although the operation is parallelized. So it requires more memory if multiple CPUs are used. This may be a potential culprit. But I suppose the 60x60x60 mesh data(all second order) shouldn't be so large.... there may be some other bugs On Wed, Jun 8, 2016 at 4:18 PM, Barry Smith wrote: > > > On Jun 8, 2016, at 4:08 PM, Xujun Zhao wrote: > > > > Barry, > > > > Thank you. I am testing on the blues. > > btw, what do they mean for the different types of memory usage? for > example, below is the summary of mem usage for 60x60x60(with 2.9M dofs). > The max process memory is 3 times as the max space PetscMalloc()ed. > > PetscMalloced is basically the PETSc data structures; Process memory is > size of the program plus PETSc malloced space plus space allocated by any > other library, in this case libMesh. It looks like libMesh is requiring a > lot of space? > > Barry > > > > > Summary of Memory Usage in PETSc > > Maximum (over computational time) process memory: total > 1.0930e+11 max 5.6928e+10 min 5.2376e+10 > > Current process memory: > total 3.1762e+09 max 2.8804e+09 min 2.9583e+08 > > Maximum (over computational time) space PetscMalloc()ed: total > 3.0071e+10 max 1.5286e+10 min 1.4785e+10 > > Current space PetscMalloc()ed: > total 1.5453e+05 max 7.7264e+04 min 7.7264e+04 > > > > > > > > On Wed, Jun 8, 2016 at 1:40 PM, Barry Smith wrote: > > > > > On Jun 8, 2016, at 1:30 PM, Xujun Zhao wrote: > > > > > > A quick test of a smaller system on my laptop with 25x25x25 mesh gives > the following info. > > > The memory used keeps increasing from 1 to 3 CPUs, but slightly > decreases with 4 CPUs. > > > > yes this does not look problematic > > > > > On the other hand, 60x60x60 mesh (2.9M dofs) is also not a big > system... > > > > True. > > > > I think you need to run the 60 60 60 system also on 1 2 4 and 8 > processes to see how the memory trends. I don't think we should eliminate > memory as the culprit yet. > > > > > > Barry > > > > > > > > > > > ------------------------------------------------- 1 CPU > ------------------------------------------------- > > > Summary of Memory Usage in PETSc > > > Maximum (over computational time) process memory: total > 4.7054e+09 max 4.7054e+09 min 4.7054e+09 > > > Current process memory: > total 4.7054e+09 max 4.7054e+09 min 4.7054e+09 > > > Maximum (over computational time) space PetscMalloc()ed: total > 1.6151e+09 max 1.6151e+09 min 1.6151e+09 > > > Current space PetscMalloc()ed: > total 7.7232e+04 max 7.7232e+04 min 7.7232e+04 > > > > > > ------------------------------------------------- 2 CPU > ------------------------------------------------- > > > Summary of Memory Usage in PETSc > > > Maximum (over computational time) process memory: total > 6.2389e+09 max 3.1275e+09 min 3.1113e+09 > > > Current process memory: > total 6.2389e+09 max 3.1275e+09 min 3.1113e+09 > > > Maximum (over computational time) space PetscMalloc()ed: total > 2.1589e+09 max 1.1193e+09 min 1.0397e+09 > > > Current space PetscMalloc()ed: > total 1.5446e+05 max 7.7232e+04 min 7.7232e+04 > > > > > > ------------------------------------------------- 3 CPU > ------------------------------------------------- > > > Summary of Memory Usage in PETSc > > > Maximum (over computational time) process memory: total > 7.7116e+09 max 1.9572e+09 min 1.8715e+09 > > > Current process memory: > total 7.7116e+09 max 1.9572e+09 min 1.8715e+09 > > > Maximum (over computational time) space PetscMalloc()ed: total > 2.1754e+09 max 5.8450e+08 min 5.0516e+08 > > > Current space PetscMalloc()ed: > total 3.0893e+05 max 7.7232e+04 min 7.7232e+04 > > > > > > ------------------------------------------------- 4 CPU > ------------------------------------------------- > > > Summary of Memory Usage in PETSc > > > Maximum (over computational time) process memory: total > 7.1188e+09 max 2.4651e+09 min 2.2909e+09 > > > Current process memory: > total 7.1188e+09 max 2.4651e+09 min 2.2909e+09 > > > Maximum (over computational time) space PetscMalloc()ed: total > 2.1750e+09 max 7.6982e+08 min 6.5289e+08 > > > Current space PetscMalloc()ed: > total 2.3170e+05 max 7.7232e+04 min 7.7232e+04 > > > > > > > > > On Wed, Jun 8, 2016 at 11:51 AM, Barry Smith > wrote: > > > > > > Signal 9 SIGKILL on batch systems usually means the process was > killed because it ran out of time or ran out of memory. > > > > > > Perhaps there is something in the code that is unscalable and > requires more more memory with more processes. You can run on 1 2 and 3 > processes and measure the memory usage to see if it goes up with the number > of processes using for example -memory_view > > > > > > Barry > > > > > > > > > > > > > On Jun 8, 2016, at 11:41 AM, Xujun Zhao wrote: > > > > > > > > Hi all, > > > > > > > > I am running a FE Stokes Solver with schur complement type PC on > blues. The program runs well when mesh is 40X40X40 (0.88M dofs), but when I > use 60X60X60 mesh, the program crashes and gives out some errors, which > looks like a segmentation fault. The "strange" thing is that it runs well > with 1CPU, 2CPUs, but fails on 4 or 8 CPUs. The log files are also > attached. It seems like the global matrix and vector are assembled well, > and errors come out before calling the KSPSolve(). > > > > > > > > btw, I use the recent PETSc 3.7 dbg version. for libMesh I use both > dbg and opt version, but none of those can give useful information. Has > anyone met such situations before? Many thinks. > > > > > > > > > > > > > > > > -------------- next part -------------- An HTML attachment was scrubbed... URL: From bsmith at mcs.anl.gov Wed Jun 8 16:43:14 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Wed, 8 Jun 2016 16:43:14 -0500 Subject: [petsc-users] fgmres does not support left preconditioner In-Reply-To: References: Message-ID: <98ED935C-5007-4130-9BCA-1EEC85B70EEA@mcs.anl.gov> I do not think that it is possible to have a "left preconditioned" FMGRES. Barry > On Jun 8, 2016, at 2:31 PM, Fande Kong wrote: > > Hi all, > > Any reasons to let fgmres do not support left preconditioner? In theory, fgmres should with left preconditioner. Please correct me, if I am wrong. > > > Fande Kong, > > > [0]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- > [0]PETSC ERROR: No support for this operation for this object type > [0]PETSC ERROR: KSP fgmres does not support LEFT > [0]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. > [0]PETSC ERROR: Petsc Release Version 3.6.2, unknown > [0]PETSC ERROR: ./heartfsi on a arch-darwin-cxx-opt named LiviadeMacBook-Pro.local by livia Wed Jun 8 12:19:07 2016 > [0]PETSC ERROR: Configure options --with-clanguage=cxx --with-shared-libraries=1 --download-fblaslapack=1 --with-mpi-dir=/Users/livia/math/mpich-3.1_install --download-parmetis=1 --download-metis=1 --download-netcdf=1 --download-exodusii=1 --download-hdf5=1 --with-debugging=no --with-c2html=0 --download-hypre=1 --download-superlu_dist=1 --with-64-bit-indices=1 > [0]PETSC ERROR: #1 KSPSetUpNorms_Private() line 418 in /Users/livia/math/petsc/src/ksp/ksp/interface/itcreate.c > [0]PETSC ERROR: #2 KSPSetUp() line 256 in /Users/livia/math/petsc/src/ksp/ksp/interface/itfunc.c > [0]PETSC ERROR: #3 KSPSolve() line 546 in /Users/livia/math/petsc/src/ksp/ksp/interface/itfunc.c > [0]PETSC ERROR: #4 SNESSolve_NEWTONLS() line 233 in /Users/livia/math/petsc/src/snes/impls/ls/ls.c > [0]PETSC ERROR: #5 SNESSolve() line 3906 in /Users/livia/math/petsc/src/snes/interface/snes.c > [0]PETSC ERROR: #6 TimeStepperSolve() line 376 in /Users/livia/math/spmcs/src/application/heartfsi/timestepper.cpp > [0]PETSC ERROR: #7 main() line 68 in /Users/livia/math/spmcs/src/application/heartfsi/fluidstructureinteraction.cpp > From hongzhang at anl.gov Wed Jun 8 22:48:43 2016 From: hongzhang at anl.gov (Hong Zhang) Date: Wed, 8 Jun 2016 20:48:43 -0700 Subject: [petsc-users] TSSetExactFinalTime Behavior Without TSAdapt In-Reply-To: <5cf95ffc-0f25-63b7-7f9a-0b227c529064@stanford.edu> References: <7b409e70-60fa-a1f2-6dd1-052fdcbb8601@stanford.edu> <5cf95ffc-0f25-63b7-7f9a-0b227c529064@stanford.edu> Message-ID: Add TSSetFromOptions(ts_solver) before TSSolve(). Please let us know if it works. Hong > On Jun 7, 2016, at 12:49 PM, Paul Urbanczyk wrote: > > Hello, > > See below for my initial code, before adding TSSetExactFinalTime. > > That version yielded the following error: > > [0]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- > [0]PETSC ERROR: Object is in wrong state > [0]PETSC ERROR: You must call TSSetExactFinalTime() or use -ts_exact_final_time before calling TSSolve() > [0]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. > [0]PETSC ERROR: Petsc Development GIT revision: v3.7.1-449-g419beca GIT Date: 2016-06-01 15:39:33 -0500 > [0]PETSC ERROR: ./urbanSCFD on a arch-linux2-c-debug named prometheus by gomer Tue Jun 7 12:42:05 2016 > [0]PETSC ERROR: Configure options > [0]PETSC ERROR: #1 TSSolve() line 3946 in /home/gomer/local/petsc/src/ts/interface/ts.c > > I then added: > > TSSetExactFinalTime(ts_solver,TS_EXACTFINALTIME_STEPOVER); > > Running then yielded the following error: > > [0]PETSC ERROR: ------------------------------------------------------------------------ > [0]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, probably memory access out of range > [0]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger > [0]PETSC ERROR: or see http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind > [0]PETSC ERROR: or try http://valgrind.org on GNU/linux and Apple Mac OS X to find memory corruption errors > [0]PETSC ERROR: likely location of problem given in stack below > [0]PETSC ERROR: --------------------- Stack Frames ------------------------------------ > [0]PETSC ERROR: Note: The EXACT line numbers in the stack are not available, > [0]PETSC ERROR: INSTEAD the line number of the start of the function > [0]PETSC ERROR: is given. > [0]PETSC ERROR: [0] TSAdaptChoose line 571 /home/gomer/local/petsc/src/ts/adapt/interface/tsadapt.c > [0]PETSC ERROR: [0] TSStep_Euler line 20 /home/gomer/local/petsc/src/ts/impls/explicit/euler/euler.c > [0]PETSC ERROR: [0] TSStep line 3707 /home/gomer/local/petsc/src/ts/interface/ts.c > [0]PETSC ERROR: [0] TSSolve line 3928 /home/gomer/local/petsc/src/ts/interface/ts.c > [0]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- > [0]PETSC ERROR: Signal received > [0]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. > [0]PETSC ERROR: Petsc Development GIT revision: v3.7.1-449-g419beca GIT Date: 2016-06-01 15:39:33 -0500 > [0]PETSC ERROR: ./urbanSCFD on a arch-linux2-c-debug named prometheus by gomer Tue Jun 7 12:44:17 2016 > [0]PETSC ERROR: Configure options > [0]PETSC ERROR: #1 User provided function() line 0 in unknown file > -------------------------------------------------------------------------- > > Finally, I added > > TSAdapt ts_adapt; > TSGetAdapt(ts_solver,&ts_adapt); > TSAdaptSetType(ts_adapt,TSADAPTNONE); > > After adding this, the program runs without error. > > Hope that helps. > > Please let me know if I was doing something wrong before to have caused this. It's not pressing for me, though, as my code now appears to be running ok. > > -Paul > > ORIGINAL VERSION WITHOUT TSSetExactFinalTime: > > void cPETScSolverClass::SolveTSProblem() > { > if(mpi_main.getRank() == 0) > { > std::cout << "*****STARTING SOLUTION*****" << std::endl; > } > > // Set up the time-stepping solver object > TSCreate(PETSC_COMM_WORLD,&ts_solver); > > // Set the problem type to be nonlinear > TSSetProblemType(ts_solver,TS_NONLINEAR); > > // Point the solution to the solution vector (vector of conserved variables) > TSSetSolution(ts_solver,solver_main.U_cons); > > // Set the time-stepping type > TSSetType(ts_solver,TSEULER); > > // Set the initial time and the time step > TSSetInitialTimeStep(ts_solver,0.0,0.001); > > // Set the total duration (number of steps and total time) > TSSetDuration(ts_solver,10,0.01); > > // Point the solver to the monitor function > TSMonitorSet(ts_solver,solver_main.TS_Monitor,this,NULL); > > // Set the distributed array context for the solver > TSSetDM(ts_solver,main_da); > > // Get the nonlinear solver for the time-stepping solver > TSGetSNES(ts_solver,&nl_solver); > > // Write out the initial condition before the solver is started > WriteSolutionCSV("initial_condition.csv"); > > // Run the solver! > TSSolve(ts_solver,solver_main.U_cons); > > if(mpi_main.getRank() == 0) > { > std::cout << "-----COMPLETED SOLUTION-----" << std::endl; > } > > // Write out the solution at the end > WriteSolutionCSV("output_test.csv"); > > // Destroy the time-stepping solver > TSDestroy(&ts_solver); > > } > > > NEW VERSION WITH TSSetExactFinalTime and TSAdaptSetType: > > void cPETScSolverClass::SolveTSProblem() > { > if(mpi_main.getRank() == 0) > { > std::cout << "*****STARTING SOLUTION*****" << std::endl; > } > > // Set up the time-stepping solver object > TSCreate(PETSC_COMM_WORLD,&ts_solver); > > // Set the problem type to be nonlinear > TSSetProblemType(ts_solver,TS_NONLINEAR); > > // Point the solution to the solution vector (vector of conserved variables) > TSSetSolution(ts_solver,solver_main.U_cons); > > // Set the time-stepping type > TSSetType(ts_solver,TSEULER); > > // Set the initial time and the time step > TSSetInitialTimeStep(ts_solver,0.0,0.001); > > // Set the total duration (number of steps and total time) > TSSetDuration(ts_solver,1,0.001); > > // Set TS exact final time behavior > TSSetExactFinalTime(ts_solver,TS_EXACTFINALTIME_STEPOVER); > > // Set TS adaptive time stepping behavior > TSAdapt ts_adapt; > TSGetAdapt(ts_solver,&ts_adapt); > TSAdaptSetType(ts_adapt,TSADAPTNONE); > > // Point the solver to the function which evaluates the right hand side > TSSetRHSFunction(ts_solver,solver_main.RHS,solver_main.FormFunction,this); > > // Point the solver to the monitor function > TSMonitorSet(ts_solver,solver_main.TS_Monitor,this,NULL); > > // Set the distributed array context for the solver > TSSetDM(ts_solver,main_da); > > // Get the nonlinear solver for the time-stepping solver > TSGetSNES(ts_solver,&nl_solver); > > // Write out the initial condition before the solver is started > WriteSolutionCSV("initial_condition.csv"); > > // Run the solver! > TSSolve(ts_solver,solver_main.U_cons); > > if(mpi_main.getRank() == 0) > { > std::cout << "-----COMPLETED SOLUTION-----" << std::endl; > } > > // Write out the solution at the end > WriteSolutionCSV("output_test.csv"); > > // Destroy the time-stepping solver > TSDestroy(&ts_solver); > > } > > > On 06/05/2016 06:44 PM, Barry Smith wrote: >> Paul, >> >> I don't think this was an expected change. Can you send code or walk us through the steps that led you to this? >> >> Barry >> >> >>> On Jun 3, 2016, at 10:23 AM, Paul Urbanczyk wrote: >>> >>> Hello, >>> >>> I recently upgraded to the latest version of PETSc (3.7.1) from the git repository. >>> >>> Running my code gave me an error message about TSSolve being in the wrong state and needing to call TSSetExactFinalTime. >>> >>> I added this function call with TS_EXACTFINALTIME_STEPOVER, but when I re-ran my code, I got a seg fault and error messages pointing to TSAdaptChoose. >>> >>> After fiddling around for a while, I found that I now needed to explicitly set the time step adaptation through TSAdaptSetType. >>> >>> Can anyone confirm that this is so? If so, it might be helpful to note that in documentation or error messages somewhere. >>> >>> Thanks, >>> >>> Paul >>> >>> > > From faraz_hussain at yahoo.com Thu Jun 9 15:32:43 2016 From: faraz_hussain at yahoo.com (Faraz Hussain) Date: Thu, 9 Jun 2016 20:32:43 +0000 (UTC) Subject: [petsc-users] Receiving DIVERGED_PCSETUP_FAILED References: <2128383548.499195.1465504363992.JavaMail.yahoo.ref@mail.yahoo.com> Message-ID: <2128383548.499195.1465504363992.JavaMail.yahoo@mail.yahoo.com> I have been following ex52.c ksp/ksp/examples/tutorials to use MUMPS to directly solve Ax=b. My matrix is symmetric and positive definite. I built a small cantilever beam model with matrix of 5000^2 size. It solves in 2 seconds and gives correct answer. But when I use a finer mesh of the cantilever beam with 3.3 million^2 matrix, I get the following error: Mumps row pivot threshhold = 1e-06 Mumps determinant = (0., 0.) * 2^0 Linear solve did not converge due to DIVERGED_PCSETUP_FAILED iterations 0 PCSETUP_FAILED due to FACTOR_OUTMEMORY Norm of error inf. iterations 0 It runs for more than an hour before aborting with this message. I am running it with this command: mpiexec -hostfile ./hostfile -np 48 ./ex12 -ksp_converged_reason My machines have 24 cpus and 125GB Ram. When I do "top" I see it correctly spans 48 processes on 2 nodes. The memory usage of each process is no more than 1-2GB. So I do not understand why it gives FACTOR_OUTMEMORY ? The same matrix solves in under 5 minutes in Intel Pardiso using 24 cpus on one host. I thought maybe mumps thinks it is ill-conditioned? The model does converge in the iterative solver in 4000 iterations. I also tried running with these options per the FAQ on " How can I determine the condition number of a matrix? ". mpiexec -hostfile ./hostfile -np 48 ./ex12 -pc_type none -ksp_type gmres -ksp_monitor_singular_value -ksp_gmres_restart 1000 -ksp_converged_reason -ksp_monitor_true_residual After 1337 iterations I cancelled it, and the output was: 1337 KSP preconditioned resid norm 5.647402411074e-02 true resid norm 5.647402411074e-02 ||r(i)||/||b|| 3.993316540960e-03 1337 KSP Residual norm 5.647402411074e-02 % max 1.070324243277e+05 min 1.220336631740e-01 max/min 8.770729448238e+05 From bsmith at mcs.anl.gov Thu Jun 9 17:56:43 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Thu, 9 Jun 2016 17:56:43 -0500 Subject: [petsc-users] Receiving DIVERGED_PCSETUP_FAILED In-Reply-To: <2128383548.499195.1465504363992.JavaMail.yahoo@mail.yahoo.com> References: <2128383548.499195.1465504363992.JavaMail.yahoo.ref@mail.yahoo.com> <2128383548.499195.1465504363992.JavaMail.yahoo@mail.yahoo.com> Message-ID: > On Jun 9, 2016, at 3:32 PM, Faraz Hussain wrote: > > I have been following ex52.c ksp/ksp/examples/tutorials to use MUMPS to directly solve Ax=b. My matrix is symmetric and positive definite. I built a small cantilever beam model with matrix of 5000^2 size. It solves in 2 seconds and gives correct answer. But when I use a finer mesh of the cantilever beam with 3.3 million^2 matrix, I get the following error: > > Mumps row pivot threshhold = 1e-06 Maybe you can change this to get MUMPS to pivot less aggressively. Doing lots of pivoting will require a lot more memory. In theory since it is SPD it should not need to pivot at all. > Mumps determinant = (0., 0.) * 2^0 > Linear solve did not converge due to DIVERGED_PCSETUP_FAILED iterations 0 > PCSETUP_FAILED due to FACTOR_OUTMEMORY > Norm of error inf. iterations 0 > > It runs for more than an hour before aborting with this message. I am running it with this command: > > mpiexec -hostfile ./hostfile -np 48 ./ex12 -ksp_converged_reason > > My machines have 24 cpus and 125GB Ram. When I do "top" I see it correctly spans 48 processes on 2 nodes. The memory usage of each process is no more than 1-2GB. So I do not understand why it gives FACTOR_OUTMEMORY ? > > The same matrix solves in under 5 minutes in Intel Pardiso using 24 cpus on one host. Mumps may be (likely?) is using a different matrix ordering then Intel Pardiso. Unfortunately each of these packages have a different way of asking for orderings and different orderings to chose from so you will need to look at the details for each package. > I thought maybe mumps thinks it is ill-conditioned? The model does converge in the iterative solver in 4000 iterations. I also tried running with these options per the FAQ on > > " How can I determine the condition number of a matrix? ". > > mpiexec -hostfile ./hostfile -np 48 ./ex12 -pc_type none -ksp_type gmres -ksp_monitor_singular_value -ksp_gmres_restart 1000 -ksp_converged_reason -ksp_monitor_true_residual > > After 1337 iterations I cancelled it, and the output was: You need to look at the condition number just before GMRES reaches the restart. It has to start all over again at the restart. So what was the estimated condition number at 999 iterations? It could be that Intel Pardiso produced a low quality solution if the matrix is ill conditioned. You can run with -ksp_type gmres -ksp_max_it 5 -ksp_monitor_true_residual with -pc_type lu to see how small the residuals are after the "direct" solver. Barry > > 1337 KSP preconditioned resid norm 5.647402411074e-02 true resid norm 5.647402411074e-02 ||r(i)||/||b|| 3.993316540960e-03 > 1337 KSP Residual norm 5.647402411074e-02 % max 1.070324243277e+05 min 1.220336631740e-01 max/min 8.770729448238e+05 From zonexo at gmail.com Thu Jun 9 21:28:55 2016 From: zonexo at gmail.com (TAY wee-beng) Date: Fri, 10 Jun 2016 10:28:55 +0800 Subject: [petsc-users] Fwd: Re: Error with PETSc on K computer In-Reply-To: References: <7423eeed-4b95-28e7-c55d-08e515911935@gmail.com> <3436e085-071a-db3f-3438-84e2536af2d5@gmail.com> Message-ID: Hi, The current solution cannot work. May I know if there's any other solution to try. Meanwhile, I've also email the K computer helpdesk for help. Thank you Yours sincerely, TAY wee-beng On 3/6/2016 10:33 PM, Satish Balay wrote: > Sorry - I'm not sure whats hapenning with this compiler. > > [for a build without the patch I sent ] - can you edit > PETSC_ARCH/include/petscconf.h and remove the lines > > #ifndef PETSC_HAVE_F90_2PTR_ARG > #define PETSC_HAVE_F90_2PTR_ARG 1 > #endif > > And then build the libraries [do not run configure again]. > > Does this make a difference for this example? > > Satish > > On Fri, 3 Jun 2016, TAY wee-beng wrote: > >> Hi, >> >> Is there any update to the issue below? >> >> No hurry, just to make sure that the email is sent successfully. >> >> >> Thanks >> >> >> >> -------- Forwarded Message -------- >> Subject: Re: [petsc-users] Error with PETSc on K computer >> Date: Thu, 2 Jun 2016 10:25:22 +0800 >> From: TAY wee-beng >> To: petsc-users >> >> >> >> Hi Satish, >> >> The X9 option is : >> >> Provides a different interpretation under Fortran 95 specifications >> for any parts not conforming to the language specifications of this >> compiler >> >> I just patched and re-compiled but it still can't work. I've attached the >> configure.log for both builds. >> >> FYI, some parts of the PETSc 3.6.3 code were initially patch to make it work >> with the K computer system: >> >> $ diff -u petsc-3.6.3/config/BuildSystem/config/package.py.org >> petsc-3.6.3/config/BuildSystem/config/package.py >> --- petsc-3.6.3/config/BuildSystem/config/package.py.org 2015-12-04 >> 14:06:42.000000000 +0900 >> +++ petsc-3.6.3/config/BuildSystem/config/package.py 2016-01-22 >> 11:09:37.000000000 +0900 >> @@ -174,7 +174,7 @@ >> return '' >> >> def getSharedFlag(self,cflags): >> - for flag in ['-PIC', '-fPIC', '-KPIC', '-qpic']: >> + for flag in ['-KPIC', '-fPIC', '-PIC', '-qpic']: >> if cflags.find(flag) >=0: return flag >> return '' >> >> $ diff -u petsc-3.6.3/config/BuildSystem/config/setCompilers.py.org >> petsc-3.6.3/config/BuildSystem/config/setCompilers.py >> --- petsc-3.6.3/config/BuildSystem/config/setCompilers.py.org 2015-07-23 >> 00:22:46.000000000 +0900 >> +++ petsc-3.6.3/config/BuildSystem/config/setCompilers.py 2016-01-22 >> 11:10:05.000000000 +0900 >> @@ -1017,7 +1017,7 @@ >> self.pushLanguage(language) >> #different compilers are sensitive to the order of testing these >> flags. So separete out GCC test. >> if config.setCompilers.Configure.isGNU(self.getCompiler()): testFlags = >> ['-fPIC'] >> - else: testFlags = ['-PIC', '-fPIC', '-KPIC','-qpic'] >> + else: testFlags = ['-KPIC', '-fPIC', '-PIC','-qpic'] >> for testFlag in testFlags: >> try: >> self.logPrint('Trying '+language+' compiler flag '+testFlag) >> $ diff -u petsc-3.6.3/config/BuildSystem/config/packages/openmp.py.org >> petsc-3.6.3/config/BuildSystem/config/packages/openmp.py >> --- petsc-3.6.3/config/BuildSystem/config/packages/openmp.py.org 2016-01-25 >> 15:42:23.000000000+0900 >> +++ petsc-3.6.3/config/BuildSystem/config/packages/openmp.py 2016-01-22 >> 17:13:52.000000000 +0900 >> @@ -19,7 +19,8 @@ >> self.found = 0 >> self.setCompilers.pushLanguage('C') >> # >> - for flag in ["-fopenmp", # Gnu >> + for flag in ["-Kopenmp", # Fujitsu >> + "-fopenmp", # Gnu >> "-qsmp=omp",# IBM XL C/C++ >> "-h omp", # Cray. Must come after XL because XL >> interprets this option as meaning"-soname omp" >> "-mp", # Portland Group >> >> $ diff -u ./petsc-3.6.3/config/BuildSystem/config/compilers.py.org >> ./petsc-3.6.3/config/BuildSystem/config/compilers.py >> --- ./petsc-3.6.3/config/BuildSystem/config/compilers.py.org 2015-06-10 >> 06:24:49.000000000 +0900 >> +++ ./petsc-3.6.3/config/BuildSystem/config/compilers.py 2016-02-19 >> 11:56:12.000000000 +0900 >> @@ -164,7 +164,7 @@ >> def checkCLibraries(self): >> '''Determines the libraries needed to link with C''' >> oldFlags = self.setCompilers.LDFLAGS >> - self.setCompilers.LDFLAGS += ' -v' >> + self.setCompilers.LDFLAGS += ' -###' >> self.pushLanguage('C') >> (output, returnCode) = self.outputLink('', '') >> self.setCompilers.LDFLAGS = oldFlags >> @@ -413,7 +413,7 @@ >> def checkCxxLibraries(self): >> '''Determines the libraries needed to link with C++''' >> oldFlags = self.setCompilers.LDFLAGS >> - self.setCompilers.LDFLAGS += ' -v' >> + self.setCompilers.LDFLAGS += ' -###' >> self.pushLanguage('Cxx') >> (output, returnCode) = self.outputLink('', '') >> self.setCompilers.LDFLAGS = oldFlags >> >> >> >> Thank you >> >> Yours sincerely, >> >> TAY wee-beng >> >> On 2/6/2016 3:18 AM, Satish Balay wrote: >>> What does -X9 in --FFLAGS="-X9 -O0" do? >>> >>> can you send configure.log for this build? >>> >>> And does the attached patch make a difference with this example? >>> [suggest doing a separate temporary build of PETSc - in a different source >>> location - to check this.] >>> >>> Satish >>> >>> On Wed, 1 Jun 2016, TAY wee-beng wrote: >>> >>>> Hi Satish, >>>> >>>> Only partially working: >>>> >>>> [t00196 at b04-036 tutorials]$ mpiexec -n 2 ./ex4f90 >>>> jwe1050i-w The hardware barrier couldn't be used and continues processing >>>> using the software barrier. >>>> taken to (standard) corrective action, execution continuing. >>>> jwe1050i-w The hardware barrier couldn't be used and continues processing >>>> using the software barrier. >>>> taken to (standard) corrective action, execution continuing. >>>> Vec Object:Vec Object:initial vector:initial vector: 1 MPI processes >>>> type: seq >>>> 10 >>>> 20 >>>> 30 >>>> 40 >>>> 50 >>>> 60 >>>> 1 MPI processes >>>> type: seq >>>> 10 >>>> 20 >>>> 30 >>>> 40 >>>> 50 >>>> 60 >>>> [1]PETSC ERROR: >>>> ------------------------------------------------------------------------ >>>> [1]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, >>>> probably >>>> memory access out of range >>>> [1]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger >>>> [1]PETSC ERROR: or see >>>> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind >>>> [1]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple Mac OS X >>>> to >>>> find memory corruption errors >>>> [1]PETSC ERROR: likely location of problem given in stack below >>>> [1]PETSC ERROR: --------------------- Stack Frames >>>> ------------------------------------ >>>> [1]PETSC ERROR: Note: The EXACT line numbers in the stack are not >>>> available, >>>> [1]PETSC ERROR: INSTEAD the line number of the start of the function >>>> [1]PETSC ERROR: is given. >>>> [1]PETSC ERROR: [1] F90Array1dCreate line 50 >>>> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c >>>> [1]PETSC ERROR: --------------------- Error Message >>>> ------------------------------------------[0]PETSC ERROR: >>>> ------------------------------------------------------------------------ >>>> [0]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, >>>> probably >>>> memory access out of range >>>> [0]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger >>>> [0]PETSC ERROR: or see >>>> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind >>>> [0]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple Mac OS X >>>> to >>>> find memory corruption errors >>>> [0]PETSC ERROR: likely location of problem given in stack below >>>> [0]PETSC ERROR: --------------------- Stack Frames >>>> ------------------------------------ >>>> [0]PETSC ERROR: Note: The EXACT line numbers in the stack are not >>>> available, >>>> [0]PETSC ERROR: INSTEAD the line number of the start of the function >>>> [0]PETSC ERROR: is given. >>>> [0]PETSC ERROR: [0] F90Array1dCreate line 50 >>>> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c >>>> [0]PETSC ERROR: --------------------- Error Message >>>> -------------------------------------------------------------- >>>> [1]PETSC ERROR: Signal received >>>> [1]PETSC ERROR: Seehttp://www.mcs.anl.gov/petsc/documentation/faq.html >>>> for >>>> trouble shooting. >>>> [1]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015 >>>> [1]PETSC ERROR: ./ex4f90 on a petsc-3.6.3_debug named b04-036 by Unknown >>>> Wed >>>> Jun 1 13:23:41 2016 >>>> [1]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC >>>> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" >>>> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" >>>> --LD_SHARED= >>>> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >>>> --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 >>>> --with-scalapack-lib=-SCALAPACK >>>> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >>>> --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 >>>> --with-hypre=1 >>>> --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4 >>>> [1]PETSC ERROR: #1 User provided function() line 0 in unknown file >>>> -------------------------------------------------------------------------- >>>> [mpi::mpi-api::mpi-abort] >>>> MPI_ABORT was invoked on rank 1 in communicator MPI_COMM_WORLD >>>> with errorcode 59. >>>> >>>> NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes. >>>> You may or may not see output from other processes, depending on >>>> exactly when Open MPI kills them. >>>> -------------------------------------------------------------------------- >>>> [b04-036:28998] >>>> /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_errmgr_base_error_abort+0x84) >>>> [0xffffffff11360404] >>>> [b04-036:28998] >>>> /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(ompi_mpi_abort+0x51c) >>>> [0xffffffff1110391c] >>>> [b04-036:28998] >>>> /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(MPI_Abort+0x6c) >>>> [0xffffffff1111b5ec] >>>> [b04-036:28998] >>>> /opt/FJSVtclang/GM-1.2.0-20/lib64/libtrtmet_c.so.1(MPI_Abort+0x2c) >>>> [0xffffffff00281bf0] >>>> [b04-036:28998] ./ex4f90 [0x292548] >>>> [b04-036:28998] ./ex4f90 [0x29165c] >>>> [b04-036:28998] >>>> /opt/FJSVxosmmm/lib64/libmpgpthread.so.1(_IO_funlockfile+0x5c) >>>> [0xffffffff121e1974] >>>> [b04-036:28998] ./ex4f90 [0x9f6748] >>>> [b04-036:28998] ./ex4f90 [0x9f0ea4] >>>> [b04-036:28998] ./ex4f90 [0x2c76a0] >>>> [b04-036:28998] ./ex4f90(MAIN__+0x38c) [0x10688c] >>>> [b04-036:28998] ./ex4f90(main+0xec) [0x268e91c] >>>> [b04-036:28998] /lib64/libc.so.6(__libc_start_main+0x194) >>>> [0xffffffff138cb81c] >>>> [b04-036:28998] ./ex4f90 [0x1063ac] >>>> [1]PETSC ERROR: >>>> ------------------------------------------------------------------------ >>>> [1]PETSC ERROR: Caught signal number 15 Terminate: Some process (or the >>>> batch >>>> system) has told this process to end >>>> [1]PETSC ERROR: Tr-------------------- >>>> [0]PETSC ERROR: Signal received >>>> [0]PETSC ERROR: Seehttp://www.mcs.anl.gov/petsc/documentation/faq.html >>>> for >>>> trouble shooting. >>>> [0]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015 >>>> [0]PETSC ERROR: ./ex4f90 on a petsc-3.6.3_debug named b04-036 by Unknown >>>> Wed >>>> Jun 1 13:23:41 2016 >>>> [0]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC >>>> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" >>>> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" >>>> --LD_SHARED= >>>> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >>>> --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 >>>> --with-scalapack-lib=-SCALAPACK >>>> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >>>> --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 >>>> --with-hypre=1 >>>> --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4 >>>> [0]PETSC ERROR: #1 User provided function() line 0 in unknown file >>>> -------------------------------------------------------------------------- >>>> [mpi::mpi-api::mpi-abort] >>>> MPI_ABORT was invoked on rank 0 in communicator MPI_COMM_WORLD >>>> with errorcode 59. >>>> >>>> NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes. >>>> You may or may not see output from other processes, depending on >>>> exactly when Open MPI kills them. >>>> -------------------------------------------------------------------------- >>>> [b04-036:28997] >>>> /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_errmgr_base_error_abort+0x84) >>>> [0xffffffff11360404] >>>> [b04-036:28997] >>>> /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(ompi_mpi_abort+0x51c) >>>> [0xffffffff1110391c] >>>> [b04-036:28997] >>>> /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(MPI_Abort+0x6c) >>>> [0xffffffff1111b5ec] >>>> [b04-036:28997] >>>> /opt/FJSVtclang/GM-1.2.0-20/lib64/libtrtmet_c.so.1(MPI_Abort+0x2c) >>>> [0xffffffff00281bf0] >>>> [b04-036:28997] ./ex4f90 [0x292548] >>>> [b04-036:28997] ./ex4f90 [0x29165c] >>>> [b04-036:28997] >>>> /opt/FJSVxosmmm/lib64/libmpgpthread.so.1(_IO_funlockfile+0x5c) >>>> [0xffffffff121e1974] >>>> [b04-036:28997] ./ex4f90 [0x9f6748] >>>> [b04-036:28997] ./ex4f90 [0x9f0ea4] >>>> [b04-036:28997] ./ex4f90 [0x2c76a0] >>>> [b04-036:28997] ./ex4f90(MAIN__+0x38c) [0x10688c] >>>> [b04-036:28997] ./ex4f90(main+0xec) [0x268e91c] >>>> [b04-036:28997] /lib64/libc.so.6(__libc_start_main+0x194) >>>> [0xffffffff138cb81c] >>>> [b04-036:28997] ./ex4f90 [0x1063ac] >>>> [0]PETSC ERROR: >>>> ------------------------------------------------------------------------ >>>> [0]PETSC ERROR: Caught signal number 15 Terminate: Some process (or the >>>> batch >>>> system) has told this process to end >>>> [0]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger >>>> [0]PETSC ERROR: or see >>>> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind >>>> [0]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple Mac OS X >>>> to >>>> find memory corruption errors >>>> [0]PETSC ERROR: likely location of problem given in stack below >>>> [0]PETSC ERROR: --------------------- Stack Frames >>>> ------------------------------------ >>>> [0]PETSC ERROR: Note: The EXACT line numbers in the stack are not >>>> available, >>>> [0]PETSC ERROR: INSTEAD the line number of the start of the function >>>> [0]PETSC ERROR: is given. >>>> [0]PETSC ERROR: [0] F90Array1dCreate line 50 >>>> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c >>>> [0]PETSC ERROR: --------------------- Error Message >>>> -------------------------------------------------------------- >>>> [0]PETSC ERROR: Signal received >>>> [0]PETSC ERROR: Seehttp://www.mcs.anl.gov/petsc/documentation/faq.html >>>> for >>>> trouble shooting. >>>> [0]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015 >>>> [0]PETSC ERROR: ./ex4f90 on a petsc-3.6.3_debug named b04-036 by Unknown >>>> Wed >>>> Jun 1 13:23:41 2016 >>>> [0]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC >>>> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" >>>> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" >>>> --LD_SHARED= >>>> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >>>> --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 >>>> --with-scalapack-lib=-SCALAPACK >>>> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >>>> --with-fortran-interfaces=1 --with-debuy option -start_in_debugger or >>>> -on_error_attach_debugger >>>> [1]PETSC ERROR: or see >>>> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind >>>> [1]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple Mac OS X >>>> to >>>> find memory corruption errors >>>> [1]PETSC ERROR: likely location of problem given in stack below >>>> [1]PETSC ERROR: --------------------- Stack Frames >>>> ------------------------------------ >>>> [1]PETSC ERROR: Note: The EXACT line numbers in the stack are not >>>> available, >>>> [1]PETSC ERROR: INSTEAD the line number of the start of the function >>>> [1]PETSC ERROR: is given. >>>> [1]PETSC ERROR: [1] F90Array1dCreate line 50 >>>> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c >>>> [1]PETSC ERROR: --------------------- Error Message >>>> -------------------------------------------------------------- >>>> [1]PETSC ERROR: Signal received >>>> [1]PETSC ERROR: Seehttp://www.mcs.anl.gov/petsc/documentation/faq.html >>>> for >>>> trouble shooting. >>>> [1]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015 >>>> [1]PETSC ERROR: ./ex4f90 on a petsc-3.6.3_debug named b04-036 by Unknown >>>> Wed >>>> Jun 1 13:23:41 2016 >>>> [1]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC >>>> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" >>>> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" >>>> --LD_SHARED= >>>> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >>>> --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 >>>> --with-scalapack-lib=-SCALAPACK >>>> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >>>> --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 >>>> --with-hypre=1 >>>> --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4 >>>> [1]PETSC ERROR: #2 User provided function() line 0 in unknown file >>>> gging=1 --useThreads=0 --with-hypre=1 >>>> --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4 >>>> [0]PETSC ERROR: #2 User provided function() line 0 in unknown file >>>> [ERR.] PLE 0019 plexec One of MPI processes was >>>> aborted.(rank=0)(nid=0x04180034)(CODE=1938,793745140674134016,15104) >>>> [t00196 at b04-036 tutorials]$ >>>> [ERR.] PLE 0021 plexec The interactive job has aborted with the >>>> signal.(sig=24) >>>> [INFO] PJM 0083 pjsub Interactive job 5211401 completed. >>>> >>>> Thank you >>>> >>>> Yours sincerely, >>>> >>>> TAY wee-beng >>>> >>>> On 1/6/2016 12:21 PM, Satish Balay wrote: >>>>> Do PETSc examples using VecGetArrayF90() work? >>>>> >>>>> say src/vec/vec/examples/tutorials/ex4f90.F >>>>> >>>>> Satish >>>>> >>>>> On Tue, 31 May 2016, TAY wee-beng wrote: >>>>> >>>>>> Hi, >>>>>> >>>>>> I'm trying to run my MPI CFD code on Japan's K computer. My code can >>>>>> run >>>>>> if I >>>>>> didn't make use of the PETSc DMDAVecGetArrayF90 subroutine. If it's >>>>>> called >>>>>> >>>>>> call DMDAVecGetArrayF90(da_u,u_local,u_array,ierr) >>>>>> >>>>>> I get the error below. I have no problem with my code on other >>>>>> clusters >>>>>> using >>>>>> the new Intel compilers. I used to have problems with DM when using >>>>>> the >>>>>> old >>>>>> Intel compilers. Now on the K computer, I'm using Fujitsu's Fortran >>>>>> compiler. >>>>>> How can I troubleshoot? >>>>>> >>>>>> Btw, I also tested on the ex13f90 example and it didn't work too. The >>>>>> error is >>>>>> below. >>>>>> >>>>>> >>>>>> My code error: >>>>>> >>>>>> /* size_x,size_y,size_z 76x130x136*//* >>>>>> *//* total grid size = 1343680*//* >>>>>> *//* recommended cores (50k / core) = 26.87360000000000*//* >>>>>> *//* 0*//* >>>>>> *//* 1*//* >>>>>> *//* 1*//* >>>>>> *//*[3]PETSC ERROR: [1]PETSC ERROR: >>>>>> ------------------------------------------------------------------------*//* >>>>>> *//*[1]PETSC ERROR: Caught signal number 11 SEGV: Segmentation >>>>>> Violation, >>>>>> probably memory access out of range*//* >>>>>> *//*[1]PETSC ERROR: Try option -start_in_debugger or >>>>>> -on_error_attach_debugger*//* >>>>>> *//*[1]PETSC ERROR: or see >>>>>> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* >>>>>> *//*[1]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple >>>>>> Mac >>>>>> OS X >>>>>> to find memory corruption errors*//* >>>>>> *//*[1]PETSC ERROR: likely location of problem given in stack >>>>>> below*//* >>>>>> *//*[1]PETSC ERROR: --------------------- Stack Frames >>>>>> ------------------------------------*//* >>>>>> *//*[1]PETSC ERROR: Note: The EXACT line numbers in the stack are not >>>>>> available,*//* >>>>>> *//*[1]PETSC ERROR: INSTEAD the line number of the start of the >>>>>> function*//* >>>>>> *//*[1]PETSC ERROR: is given.*//* >>>>>> *//*[1]PETSC ERROR: [1] F90Array3dCreate line 244 >>>>>> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* >>>>>> *//* 1*//* >>>>>> *//*------------------------------------------------------------------------*//* >>>>>> *//*[3]PETSC ERROR: Caught signal number 11 SEGV: Segmentation >>>>>> Violation, >>>>>> probably memory access out of range*//* >>>>>> *//*[3]PETSC ERROR: Try option -start_in_debugger or >>>>>> -on_error_attach_debugger*//* >>>>>> *//*[3]PETSC ERROR: or see >>>>>> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* >>>>>> *//*[3]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple >>>>>> Mac >>>>>> OS X >>>>>> to find memory corruption errors*//* >>>>>> *//*[3]PETSC ERROR: likely location of problem given in stack >>>>>> below*//* >>>>>> *//*[3]PETSC ERROR: --------------------- Stack Frames >>>>>> ------------------------------------*//* >>>>>> *//*[0]PETSC ERROR: >>>>>> ------------------------------------------------------------------------*//* >>>>>> *//*[0]PETSC ERROR: Caught signal number 11 SEGV: Segmentation >>>>>> Violation, >>>>>> probably memory access out of range*//* >>>>>> *//*[0]PETSC ERROR: Try option -start_in_debugger or >>>>>> -on_error_attach_debugger*//* >>>>>> *//*[0]PETSC ERROR: or see >>>>>> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* >>>>>> *//*[0]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple >>>>>> Mac >>>>>> OS X >>>>>> to find memory corruption errors*//* >>>>>> *//*[0]PETSC ERROR: likely location of problem given in stack >>>>>> below*//* >>>>>> *//*[0]PETSC ERROR: --------------------- Stack Frames >>>>>> ------------------------------------*//* >>>>>> *//*[0]PETSC ERROR: Note: The EXACT line numbers in the stack are not >>>>>> available,*//* >>>>>> *//*[0]PETSC ERROR: INSTEAD the line number of the start of the >>>>>> function*//* >>>>>> *//*[0]PETSC ERROR: is given.*//* >>>>>> *//*[0]PETSC ERROR: [0] F90Array3dCreate line 244 >>>>>> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* >>>>>> *//*[0]PETSC ERROR: --------------------- Error Message >>>>>> ----------------------------------------- 1*//* >>>>>> *//*[2]PETSC ERROR: >>>>>> ------------------------------------------------------------------------*//* >>>>>> *//*[2]PETSC ERROR: Caught signal number 11 SEGV: Segmentation >>>>>> Violation, >>>>>> probably memory access out of range*//* >>>>>> *//*[2]PETSC ERROR: Try option -start_in_debugger or >>>>>> -on_error_attach_debugger*//* >>>>>> *//*[2]PETSC ERROR: or see >>>>>> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* >>>>>> *//*[2]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple >>>>>> Mac >>>>>> OS X >>>>>> to find memory corruption errors*//* >>>>>> *//*[2]PETSC ERROR: likely location of problem given in stack >>>>>> below*//* >>>>>> *//*[2]PETSC ERROR: --------------------- Stack Frames >>>>>> ------------------------------------*//* >>>>>> *//*[2]PETSC ERROR: Note: The EXACT line numbers in the stack are not >>>>>> available,*//* >>>>>> *//*[2]PETSC ERROR: INSTEAD the line number of the start of the >>>>>> function*//* >>>>>> *//*[2]PETSC ERROR: is given.*//* >>>>>> *//*[2]PETSC ERROR: [2] F90Array3dCreate line 244 >>>>>> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* >>>>>> *//*[2]PETSC ERROR: --------------------- Error Message >>>>>> -----------------------------------------[3]PETSC ERROR: Note: The >>>>>> EXACT >>>>>> line >>>>>> numbers in the stack are not available,*//* >>>>>> *//*[3]PETSC ERROR: INSTEAD the line number of the start of the >>>>>> function*//* >>>>>> *//*[3]PETSC ERROR: is given.*//* >>>>>> *//*[3]PETSC ERROR: [3] F90Array3dCreate line 244 >>>>>> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* >>>>>> *//*[3]PETSC ERROR: --------------------- Error Message >>>>>> --------------------------------------------------------------*//* >>>>>> *//*[3]PETSC ERROR: Signal received*//* >>>>>> *//*[3]PETSC ERROR: See >>>>>> http://www.mcs.anl.gov/petsc/documentation/faq.html >>>>>> for trouble shooting.*//* >>>>>> *//*[3]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015*//* >>>>>> *//*[3]PETSC ERROR: ./a-debug.out on a petsc-3.6.3_debug named b04-036 >>>>>> by >>>>>> Unknown Wed Jun 1 12:54:34 2016*//* >>>>>> *//*[3]PETSC ERROR: Configure options --with-cc=mpifcc >>>>>> --with-cxx=mpiFCC >>>>>> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg >>>>>> -O0" >>>>>> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" >>>>>> --LD_SHARED= >>>>>> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >>>>>> --with-shared----------------------*//* >>>>>> *//*[0]PETSC ERROR: Signal received*//* >>>>>> *//*[0]PETSC ERROR: See >>>>>> http://www.mcs.anl.gov/petsc/documentation/faq.html >>>>>> for trouble shooting.*//* >>>>>> *//*[0]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015*//* >>>>>> *//*[0]PETSC ERROR: ./a-debug.out on a petsc-3.6.3_debug named b04-036 >>>>>> by >>>>>> Unknown Wed Jun 1 12:54:34 2016*//* >>>>>> *//*[0]PETSC ERROR: Configure options --with-cc=mpifcc >>>>>> --with-cxx=mpiFCC >>>>>> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg >>>>>> -O0" >>>>>> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" >>>>>> --LD_SHARED= >>>>>> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >>>>>> --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 >>>>>> --with-scalapack-lib=-SCALAPACK >>>>>> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >>>>>> --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 >>>>>> --with-hypre=1 >>>>>> --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4*//* >>>>>> *//*[0]PETSC ERROR: #1 User provided function() line 0 in unknown >>>>>> file*//* >>>>>> *//*--------------------------------------------------------------------------*//* >>>>>> *//*[m---------------------*//* >>>>>> *//*[2]PETSC ERROR: Signal received*//* >>>>>> *//*[2]PETSC ERROR: See >>>>>> http://www.mcs.anl.gov/petsc/documentation/faq.html >>>>>> for trouble shooting.*//* >>>>>> *//*[2]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015*//* >>>>>> *//*[2]PETSC ERROR: ./a-debug.out on a petsc-3.6.3_debug named b04-036 >>>>>> by >>>>>> Unknown Wed Jun 1 12:54:34 2016*//* >>>>>> *//*[2]PETSC ERROR: Configure options --with-cc=mpifcc >>>>>> --with-cxx=mpiFCC >>>>>> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg >>>>>> -O0" >>>>>> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" >>>>>> --LD_SHARED= >>>>>> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >>>>>> --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 >>>>>> --with-scalapack-lib=-SCALAPACK >>>>>> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >>>>>> --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 >>>>>> --with-hypre=1 >>>>>> --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4*//* >>>>>> *//*[2]PETSC ERROR: #1 User provided function() line 0 in unknown >>>>>> file*//* >>>>>> *//*--------------------------------------------------------------------------*//* >>>>>> *//*[m[1]PETSC ERROR: --------------------- Error Message >>>>>> --------------------------------------------------------------*//* >>>>>> *//*[1]PETSC ERROR: Signal received*//* >>>>>> *//*[1]PETSC ERROR: See >>>>>> http://www.mcs.anl.gov/petsc/documentation/faq.html >>>>>> for trouble shooting.*//* >>>>>> *//*[1]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015*//* >>>>>> *//*[1]PETSC ERROR: ./a-debug.out on a petsc-3.6.3_debug named b04-036 >>>>>> by >>>>>> Unknown Wed Jun 1 12:54:34 2016*//* >>>>>> *//*[1]PETSC ERROR: Configure options --with-cc=mpifcc >>>>>> --with-cxx=mpiFCC >>>>>> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg >>>>>> -O0" >>>>>> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" >>>>>> --LD_SHARED= >>>>>> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >>>>>> --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 >>>>>> --with-scalapack-lib=-SCALAPACK >>>>>> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >>>>>> --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 >>>>>> --with-hypre=1 >>>>>> --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4*//* >>>>>> *//*[1]PETSC ERROR: #1 User provided function() line 0 ilibraries=0 >>>>>> --with-blas-lapack-lib=-SSL2 --with-scalapack-lib=-SCALAPACK >>>>>> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >>>>>> --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 >>>>>> --with-hypre=1 >>>>>> --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4*//* >>>>>> *//*[3]PETSC ERROR: #1 User provided function() line 0 in unknown >>>>>> file*//* >>>>>> *//*--------------------------------------------------------------------------*//* >>>>>> *//*[mpi::mpi-api::mpi-abort]*//* >>>>>> *//*MPI_ABORT was invoked on rank 3 in communicator MPI_COMM_WORLD*//* >>>>>> *//*with errorcode 59.*//* >>>>>> *//* >>>>>> *//*NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI >>>>>> processes.*//* >>>>>> *//*You may or may not see output from other processes, depending >>>>>> on*//* >>>>>> *//*exactly when Open MPI kills them.*//* >>>>>> *//*--------------------------------------------------------------------------*//* >>>>>> *//*[b04-036:28416] >>>>>> /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_errmgr_base_error_abort+0x84) >>>>>> [0xffffffff11360404]*//* >>>>>> *//*[b04-036:28416] >>>>>> /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(ompi_mpi_abort+0x51c) >>>>>> [0xffffffff1110391c]*//* >>>>>> *//*[b04-036:28416] >>>>>> /opt/FJSVtclang/GM-1.2.0-2pi::mpi-api::mpi-abort]*//* >>>>>> *//*MPI_ABORT was invoked on rank 2 in communicator MPI_COMM_WORLD*//* >>>>>> *//*with errorcode 59.*/ >>>>>> >>>>>> ex13f90 error: >>>>>> >>>>>> >>>>>> /*[t00196 at b04-036 tutorials]$ mpiexec -np 2 ./ex13f90*//* >>>>>> *//*jwe1050i-w The hardware barrier couldn't be used and continues >>>>>> processing >>>>>> using the software barrier.*//* >>>>>> *//*taken to (standard) corrective action, execution continuing.*//* >>>>>> *//*jwe1050i-w The hardware barrier couldn't be used and continues >>>>>> processing >>>>>> using the software barrier.*//* >>>>>> *//*taken to (standard) corrective action, execution continuing.*//* >>>>>> *//* Hi! We're solving van der Pol using 2 processes.*//* >>>>>> *//* >>>>>> *//* t x1 x2*//* >>>>>> *//*[1]PETSC ERROR: >>>>>> ------------------------------------------------------------------------*//* >>>>>> *//*[1]PETSC ERROR: Caught signal number 10 BUS: Bus Error, possibly >>>>>> illegal >>>>>> memory access*//* >>>>>> *//*[1]PETSC ERROR: Try option -start_in_debugger or >>>>>> -on_error_attach_debugger*//* >>>>>> *//*[0]PETSC ERROR: >>>>>> ------------------------------------------------------------------------*//* >>>>>> *//*[0]PETSC ERROR: Caught signal number 10 BUS: Bus Error, possibly >>>>>> illegal >>>>>> memory access*//* >>>>>> *//*[0]PETSC ERROR: Try option -start_in_debugger or >>>>>> -on_error_attach_debugger*//* >>>>>> *//*[0]PETSC ERROR: or see >>>>>> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* >>>>>> *//*[0]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple >>>>>> Mac >>>>>> OS X >>>>>> to find memory corruption errors*//* >>>>>> *//*[1]PETSC ERROR: or see >>>>>> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* >>>>>> *//*[1]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple >>>>>> Mac >>>>>> OS X >>>>>> to find memory corruption errors*//* >>>>>> *//*[1]PETSC ERROR: likely location of problem given in stack >>>>>> below*//* >>>>>> *//*[1]PETSC ERROR: --------------------- Stack Frames >>>>>> ------------------------------------*//* >>>>>> *//*[1]PETSC ERROR: Note: The EXACT line numbers in the stack are not >>>>>> available,*//* >>>>>> *//*[1]PETSC ERROR: INSTEAD the line number of the start of the >>>>>> function*//* >>>>>> *//*[1]PETSC ERROR: is given.*//* >>>>>> *//*[1]PETSC ERROR: [1] F90Array4dCreate line 337 >>>>>> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* >>>>>> *//*[0]PETSC ERROR: likely location of problem given in stack >>>>>> below*//* >>>>>> *//*[0]PETSC ERROR: --------------------- Stack Frames >>>>>> ------------------------------------*//* >>>>>> *//*[0]PETSC ERROR: Note: The EXACT line numbers in the stack are not >>>>>> available,*//* >>>>>> *//*[0]PETSC ERROR: INSTEAD the line number of the start of the >>>>>> function*//* >>>>>> *//*[0]PETSC ERROR: is given.*//* >>>>>> *//*[0]PETSC ERROR: [0] F90Array4dCreate line 337 >>>>>> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* >>>>>> *//*[1]PETSC ERROR: --------------------- Error Message >>>>>> --------------------------------------------------------------*//* >>>>>> *//*[1]PETSC ERROR: Signal received*//* >>>>>> *//*[1]PETSC ERROR: See >>>>>> http://www.mcs.anl.gov/petsc/documentation/faq.html >>>>>> for trouble shooting.*//* >>>>>> *//*[1]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015*//* >>>>>> *//*[1]PETSC ERROR: ./ex13f90 on a petsc-3.6.3_debug named b04-036 by >>>>>> Unknown >>>>>> Wed Jun 1 13:04:34 2016*//* >>>>>> *//*[1]PETSC ERROR: Configure options --with-cc=mpifcc >>>>>> --with-cxx=mpiFCC >>>>>> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg >>>>>> -O0" >>>>>> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" >>>>>> --LD_SHARED= >>>>>> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >>>>>> --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 >>>>>> --with-scalapack-lib=-SCALAPACK >>>>>> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >>>>>> --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 >>>>>> --with-hypre=1 >>>>>> --with-hyp*//* >>>>>> */ >>>>>> >>>>>> >>>>>> >> From bsmith at mcs.anl.gov Thu Jun 9 22:00:00 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Thu, 9 Jun 2016 22:00:00 -0500 Subject: [petsc-users] Fwd: Re: Error with PETSc on K computer In-Reply-To: References: <7423eeed-4b95-28e7-c55d-08e515911935@gmail.com> <3436e085-071a-db3f-3438-84e2536af2d5@gmail.com> Message-ID: <6E84C554-39F0-4BB6-92D0-D2443BA79989@mcs.anl.gov> Without knowing the specifics of how this machine's Fortran compiler passes Fortran pointers to subroutines we cannot resolve this problem. This information can only be obtained from the experts on the this machine. Barry > On Jun 9, 2016, at 9:28 PM, TAY wee-beng wrote: > > Hi, > > The current solution cannot work. May I know if there's any other solution to try. Meanwhile, I've also email the K computer helpdesk for help. > > Thank you > > Yours sincerely, > > TAY wee-beng > > On 3/6/2016 10:33 PM, Satish Balay wrote: >> Sorry - I'm not sure whats hapenning with this compiler. >> >> [for a build without the patch I sent ] - can you edit >> PETSC_ARCH/include/petscconf.h and remove the lines >> >> #ifndef PETSC_HAVE_F90_2PTR_ARG >> #define PETSC_HAVE_F90_2PTR_ARG 1 >> #endif >> >> And then build the libraries [do not run configure again]. >> >> Does this make a difference for this example? >> >> Satish >> >> On Fri, 3 Jun 2016, TAY wee-beng wrote: >> >>> Hi, >>> >>> Is there any update to the issue below? >>> >>> No hurry, just to make sure that the email is sent successfully. >>> >>> >>> Thanks >>> >>> >>> >>> -------- Forwarded Message -------- >>> Subject: Re: [petsc-users] Error with PETSc on K computer >>> Date: Thu, 2 Jun 2016 10:25:22 +0800 >>> From: TAY wee-beng >>> To: petsc-users >>> >>> >>> >>> Hi Satish, >>> >>> The X9 option is : >>> >>> Provides a different interpretation under Fortran 95 specifications >>> for any parts not conforming to the language specifications of this >>> compiler >>> >>> I just patched and re-compiled but it still can't work. I've attached the >>> configure.log for both builds. >>> >>> FYI, some parts of the PETSc 3.6.3 code were initially patch to make it work >>> with the K computer system: >>> >>> $ diff -u petsc-3.6.3/config/BuildSystem/config/package.py.org >>> petsc-3.6.3/config/BuildSystem/config/package.py >>> --- petsc-3.6.3/config/BuildSystem/config/package.py.org 2015-12-04 >>> 14:06:42.000000000 +0900 >>> +++ petsc-3.6.3/config/BuildSystem/config/package.py 2016-01-22 >>> 11:09:37.000000000 +0900 >>> @@ -174,7 +174,7 @@ >>> return '' >>> >>> def getSharedFlag(self,cflags): >>> - for flag in ['-PIC', '-fPIC', '-KPIC', '-qpic']: >>> + for flag in ['-KPIC', '-fPIC', '-PIC', '-qpic']: >>> if cflags.find(flag) >=0: return flag >>> return '' >>> >>> $ diff -u petsc-3.6.3/config/BuildSystem/config/setCompilers.py.org >>> petsc-3.6.3/config/BuildSystem/config/setCompilers.py >>> --- petsc-3.6.3/config/BuildSystem/config/setCompilers.py.org 2015-07-23 >>> 00:22:46.000000000 +0900 >>> +++ petsc-3.6.3/config/BuildSystem/config/setCompilers.py 2016-01-22 >>> 11:10:05.000000000 +0900 >>> @@ -1017,7 +1017,7 @@ >>> self.pushLanguage(language) >>> #different compilers are sensitive to the order of testing these >>> flags. So separete out GCC test. >>> if config.setCompilers.Configure.isGNU(self.getCompiler()): testFlags = >>> ['-fPIC'] >>> - else: testFlags = ['-PIC', '-fPIC', '-KPIC','-qpic'] >>> + else: testFlags = ['-KPIC', '-fPIC', '-PIC','-qpic'] >>> for testFlag in testFlags: >>> try: >>> self.logPrint('Trying '+language+' compiler flag '+testFlag) >>> $ diff -u petsc-3.6.3/config/BuildSystem/config/packages/openmp.py.org >>> petsc-3.6.3/config/BuildSystem/config/packages/openmp.py >>> --- petsc-3.6.3/config/BuildSystem/config/packages/openmp.py.org 2016-01-25 >>> 15:42:23.000000000+0900 >>> +++ petsc-3.6.3/config/BuildSystem/config/packages/openmp.py 2016-01-22 >>> 17:13:52.000000000 +0900 >>> @@ -19,7 +19,8 @@ >>> self.found = 0 >>> self.setCompilers.pushLanguage('C') >>> # >>> - for flag in ["-fopenmp", # Gnu >>> + for flag in ["-Kopenmp", # Fujitsu >>> + "-fopenmp", # Gnu >>> "-qsmp=omp",# IBM XL C/C++ >>> "-h omp", # Cray. Must come after XL because XL >>> interprets this option as meaning"-soname omp" >>> "-mp", # Portland Group >>> >>> $ diff -u ./petsc-3.6.3/config/BuildSystem/config/compilers.py.org >>> ./petsc-3.6.3/config/BuildSystem/config/compilers.py >>> --- ./petsc-3.6.3/config/BuildSystem/config/compilers.py.org 2015-06-10 >>> 06:24:49.000000000 +0900 >>> +++ ./petsc-3.6.3/config/BuildSystem/config/compilers.py 2016-02-19 >>> 11:56:12.000000000 +0900 >>> @@ -164,7 +164,7 @@ >>> def checkCLibraries(self): >>> '''Determines the libraries needed to link with C''' >>> oldFlags = self.setCompilers.LDFLAGS >>> - self.setCompilers.LDFLAGS += ' -v' >>> + self.setCompilers.LDFLAGS += ' -###' >>> self.pushLanguage('C') >>> (output, returnCode) = self.outputLink('', '') >>> self.setCompilers.LDFLAGS = oldFlags >>> @@ -413,7 +413,7 @@ >>> def checkCxxLibraries(self): >>> '''Determines the libraries needed to link with C++''' >>> oldFlags = self.setCompilers.LDFLAGS >>> - self.setCompilers.LDFLAGS += ' -v' >>> + self.setCompilers.LDFLAGS += ' -###' >>> self.pushLanguage('Cxx') >>> (output, returnCode) = self.outputLink('', '') >>> self.setCompilers.LDFLAGS = oldFlags >>> >>> >>> >>> Thank you >>> >>> Yours sincerely, >>> >>> TAY wee-beng >>> >>> On 2/6/2016 3:18 AM, Satish Balay wrote: >>>> What does -X9 in --FFLAGS="-X9 -O0" do? >>>> >>>> can you send configure.log for this build? >>>> >>>> And does the attached patch make a difference with this example? >>>> [suggest doing a separate temporary build of PETSc - in a different source >>>> location - to check this.] >>>> >>>> Satish >>>> >>>> On Wed, 1 Jun 2016, TAY wee-beng wrote: >>>> >>>>> Hi Satish, >>>>> >>>>> Only partially working: >>>>> >>>>> [t00196 at b04-036 tutorials]$ mpiexec -n 2 ./ex4f90 >>>>> jwe1050i-w The hardware barrier couldn't be used and continues processing >>>>> using the software barrier. >>>>> taken to (standard) corrective action, execution continuing. >>>>> jwe1050i-w The hardware barrier couldn't be used and continues processing >>>>> using the software barrier. >>>>> taken to (standard) corrective action, execution continuing. >>>>> Vec Object:Vec Object:initial vector:initial vector: 1 MPI processes >>>>> type: seq >>>>> 10 >>>>> 20 >>>>> 30 >>>>> 40 >>>>> 50 >>>>> 60 >>>>> 1 MPI processes >>>>> type: seq >>>>> 10 >>>>> 20 >>>>> 30 >>>>> 40 >>>>> 50 >>>>> 60 >>>>> [1]PETSC ERROR: >>>>> ------------------------------------------------------------------------ >>>>> [1]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, >>>>> probably >>>>> memory access out of range >>>>> [1]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger >>>>> [1]PETSC ERROR: or see >>>>> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind >>>>> [1]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple Mac OS X >>>>> to >>>>> find memory corruption errors >>>>> [1]PETSC ERROR: likely location of problem given in stack below >>>>> [1]PETSC ERROR: --------------------- Stack Frames >>>>> ------------------------------------ >>>>> [1]PETSC ERROR: Note: The EXACT line numbers in the stack are not >>>>> available, >>>>> [1]PETSC ERROR: INSTEAD the line number of the start of the function >>>>> [1]PETSC ERROR: is given. >>>>> [1]PETSC ERROR: [1] F90Array1dCreate line 50 >>>>> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c >>>>> [1]PETSC ERROR: --------------------- Error Message >>>>> ------------------------------------------[0]PETSC ERROR: >>>>> ------------------------------------------------------------------------ >>>>> [0]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, >>>>> probably >>>>> memory access out of range >>>>> [0]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger >>>>> [0]PETSC ERROR: or see >>>>> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind >>>>> [0]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple Mac OS X >>>>> to >>>>> find memory corruption errors >>>>> [0]PETSC ERROR: likely location of problem given in stack below >>>>> [0]PETSC ERROR: --------------------- Stack Frames >>>>> ------------------------------------ >>>>> [0]PETSC ERROR: Note: The EXACT line numbers in the stack are not >>>>> available, >>>>> [0]PETSC ERROR: INSTEAD the line number of the start of the function >>>>> [0]PETSC ERROR: is given. >>>>> [0]PETSC ERROR: [0] F90Array1dCreate line 50 >>>>> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c >>>>> [0]PETSC ERROR: --------------------- Error Message >>>>> -------------------------------------------------------------- >>>>> [1]PETSC ERROR: Signal received >>>>> [1]PETSC ERROR: Seehttp://www.mcs.anl.gov/petsc/documentation/faq.html >>>>> for >>>>> trouble shooting. >>>>> [1]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015 >>>>> [1]PETSC ERROR: ./ex4f90 on a petsc-3.6.3_debug named b04-036 by Unknown >>>>> Wed >>>>> Jun 1 13:23:41 2016 >>>>> [1]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC >>>>> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" >>>>> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" >>>>> --LD_SHARED= >>>>> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >>>>> --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 >>>>> --with-scalapack-lib=-SCALAPACK >>>>> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >>>>> --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 >>>>> --with-hypre=1 >>>>> --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4 >>>>> [1]PETSC ERROR: #1 User provided function() line 0 in unknown file >>>>> -------------------------------------------------------------------------- >>>>> [mpi::mpi-api::mpi-abort] >>>>> MPI_ABORT was invoked on rank 1 in communicator MPI_COMM_WORLD >>>>> with errorcode 59. >>>>> >>>>> NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes. >>>>> You may or may not see output from other processes, depending on >>>>> exactly when Open MPI kills them. >>>>> -------------------------------------------------------------------------- >>>>> [b04-036:28998] >>>>> /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_errmgr_base_error_abort+0x84) >>>>> [0xffffffff11360404] >>>>> [b04-036:28998] >>>>> /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(ompi_mpi_abort+0x51c) >>>>> [0xffffffff1110391c] >>>>> [b04-036:28998] >>>>> /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(MPI_Abort+0x6c) >>>>> [0xffffffff1111b5ec] >>>>> [b04-036:28998] >>>>> /opt/FJSVtclang/GM-1.2.0-20/lib64/libtrtmet_c.so.1(MPI_Abort+0x2c) >>>>> [0xffffffff00281bf0] >>>>> [b04-036:28998] ./ex4f90 [0x292548] >>>>> [b04-036:28998] ./ex4f90 [0x29165c] >>>>> [b04-036:28998] >>>>> /opt/FJSVxosmmm/lib64/libmpgpthread.so.1(_IO_funlockfile+0x5c) >>>>> [0xffffffff121e1974] >>>>> [b04-036:28998] ./ex4f90 [0x9f6748] >>>>> [b04-036:28998] ./ex4f90 [0x9f0ea4] >>>>> [b04-036:28998] ./ex4f90 [0x2c76a0] >>>>> [b04-036:28998] ./ex4f90(MAIN__+0x38c) [0x10688c] >>>>> [b04-036:28998] ./ex4f90(main+0xec) [0x268e91c] >>>>> [b04-036:28998] /lib64/libc.so.6(__libc_start_main+0x194) >>>>> [0xffffffff138cb81c] >>>>> [b04-036:28998] ./ex4f90 [0x1063ac] >>>>> [1]PETSC ERROR: >>>>> ------------------------------------------------------------------------ >>>>> [1]PETSC ERROR: Caught signal number 15 Terminate: Some process (or the >>>>> batch >>>>> system) has told this process to end >>>>> [1]PETSC ERROR: Tr-------------------- >>>>> [0]PETSC ERROR: Signal received >>>>> [0]PETSC ERROR: Seehttp://www.mcs.anl.gov/petsc/documentation/faq.html >>>>> for >>>>> trouble shooting. >>>>> [0]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015 >>>>> [0]PETSC ERROR: ./ex4f90 on a petsc-3.6.3_debug named b04-036 by Unknown >>>>> Wed >>>>> Jun 1 13:23:41 2016 >>>>> [0]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC >>>>> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" >>>>> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" >>>>> --LD_SHARED= >>>>> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >>>>> --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 >>>>> --with-scalapack-lib=-SCALAPACK >>>>> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >>>>> --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 >>>>> --with-hypre=1 >>>>> --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4 >>>>> [0]PETSC ERROR: #1 User provided function() line 0 in unknown file >>>>> -------------------------------------------------------------------------- >>>>> [mpi::mpi-api::mpi-abort] >>>>> MPI_ABORT was invoked on rank 0 in communicator MPI_COMM_WORLD >>>>> with errorcode 59. >>>>> >>>>> NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes. >>>>> You may or may not see output from other processes, depending on >>>>> exactly when Open MPI kills them. >>>>> -------------------------------------------------------------------------- >>>>> [b04-036:28997] >>>>> /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_errmgr_base_error_abort+0x84) >>>>> [0xffffffff11360404] >>>>> [b04-036:28997] >>>>> /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(ompi_mpi_abort+0x51c) >>>>> [0xffffffff1110391c] >>>>> [b04-036:28997] >>>>> /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(MPI_Abort+0x6c) >>>>> [0xffffffff1111b5ec] >>>>> [b04-036:28997] >>>>> /opt/FJSVtclang/GM-1.2.0-20/lib64/libtrtmet_c.so.1(MPI_Abort+0x2c) >>>>> [0xffffffff00281bf0] >>>>> [b04-036:28997] ./ex4f90 [0x292548] >>>>> [b04-036:28997] ./ex4f90 [0x29165c] >>>>> [b04-036:28997] >>>>> /opt/FJSVxosmmm/lib64/libmpgpthread.so.1(_IO_funlockfile+0x5c) >>>>> [0xffffffff121e1974] >>>>> [b04-036:28997] ./ex4f90 [0x9f6748] >>>>> [b04-036:28997] ./ex4f90 [0x9f0ea4] >>>>> [b04-036:28997] ./ex4f90 [0x2c76a0] >>>>> [b04-036:28997] ./ex4f90(MAIN__+0x38c) [0x10688c] >>>>> [b04-036:28997] ./ex4f90(main+0xec) [0x268e91c] >>>>> [b04-036:28997] /lib64/libc.so.6(__libc_start_main+0x194) >>>>> [0xffffffff138cb81c] >>>>> [b04-036:28997] ./ex4f90 [0x1063ac] >>>>> [0]PETSC ERROR: >>>>> ------------------------------------------------------------------------ >>>>> [0]PETSC ERROR: Caught signal number 15 Terminate: Some process (or the >>>>> batch >>>>> system) has told this process to end >>>>> [0]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger >>>>> [0]PETSC ERROR: or see >>>>> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind >>>>> [0]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple Mac OS X >>>>> to >>>>> find memory corruption errors >>>>> [0]PETSC ERROR: likely location of problem given in stack below >>>>> [0]PETSC ERROR: --------------------- Stack Frames >>>>> ------------------------------------ >>>>> [0]PETSC ERROR: Note: The EXACT line numbers in the stack are not >>>>> available, >>>>> [0]PETSC ERROR: INSTEAD the line number of the start of the function >>>>> [0]PETSC ERROR: is given. >>>>> [0]PETSC ERROR: [0] F90Array1dCreate line 50 >>>>> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c >>>>> [0]PETSC ERROR: --------------------- Error Message >>>>> -------------------------------------------------------------- >>>>> [0]PETSC ERROR: Signal received >>>>> [0]PETSC ERROR: Seehttp://www.mcs.anl.gov/petsc/documentation/faq.html >>>>> for >>>>> trouble shooting. >>>>> [0]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015 >>>>> [0]PETSC ERROR: ./ex4f90 on a petsc-3.6.3_debug named b04-036 by Unknown >>>>> Wed >>>>> Jun 1 13:23:41 2016 >>>>> [0]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC >>>>> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" >>>>> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" >>>>> --LD_SHARED= >>>>> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >>>>> --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 >>>>> --with-scalapack-lib=-SCALAPACK >>>>> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >>>>> --with-fortran-interfaces=1 --with-debuy option -start_in_debugger or >>>>> -on_error_attach_debugger >>>>> [1]PETSC ERROR: or see >>>>> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind >>>>> [1]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple Mac OS X >>>>> to >>>>> find memory corruption errors >>>>> [1]PETSC ERROR: likely location of problem given in stack below >>>>> [1]PETSC ERROR: --------------------- Stack Frames >>>>> ------------------------------------ >>>>> [1]PETSC ERROR: Note: The EXACT line numbers in the stack are not >>>>> available, >>>>> [1]PETSC ERROR: INSTEAD the line number of the start of the function >>>>> [1]PETSC ERROR: is given. >>>>> [1]PETSC ERROR: [1] F90Array1dCreate line 50 >>>>> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c >>>>> [1]PETSC ERROR: --------------------- Error Message >>>>> -------------------------------------------------------------- >>>>> [1]PETSC ERROR: Signal received >>>>> [1]PETSC ERROR: Seehttp://www.mcs.anl.gov/petsc/documentation/faq.html >>>>> for >>>>> trouble shooting. >>>>> [1]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015 >>>>> [1]PETSC ERROR: ./ex4f90 on a petsc-3.6.3_debug named b04-036 by Unknown >>>>> Wed >>>>> Jun 1 13:23:41 2016 >>>>> [1]PETSC ERROR: Configure options --with-cc=mpifcc --with-cxx=mpiFCC >>>>> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg -O0" >>>>> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" >>>>> --LD_SHARED= >>>>> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >>>>> --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 >>>>> --with-scalapack-lib=-SCALAPACK >>>>> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >>>>> --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 >>>>> --with-hypre=1 >>>>> --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4 >>>>> [1]PETSC ERROR: #2 User provided function() line 0 in unknown file >>>>> gging=1 --useThreads=0 --with-hypre=1 >>>>> --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4 >>>>> [0]PETSC ERROR: #2 User provided function() line 0 in unknown file >>>>> [ERR.] PLE 0019 plexec One of MPI processes was >>>>> aborted.(rank=0)(nid=0x04180034)(CODE=1938,793745140674134016,15104) >>>>> [t00196 at b04-036 tutorials]$ >>>>> [ERR.] PLE 0021 plexec The interactive job has aborted with the >>>>> signal.(sig=24) >>>>> [INFO] PJM 0083 pjsub Interactive job 5211401 completed. >>>>> >>>>> Thank you >>>>> >>>>> Yours sincerely, >>>>> >>>>> TAY wee-beng >>>>> >>>>> On 1/6/2016 12:21 PM, Satish Balay wrote: >>>>>> Do PETSc examples using VecGetArrayF90() work? >>>>>> >>>>>> say src/vec/vec/examples/tutorials/ex4f90.F >>>>>> >>>>>> Satish >>>>>> >>>>>> On Tue, 31 May 2016, TAY wee-beng wrote: >>>>>> >>>>>>> Hi, >>>>>>> >>>>>>> I'm trying to run my MPI CFD code on Japan's K computer. My code can >>>>>>> run >>>>>>> if I >>>>>>> didn't make use of the PETSc DMDAVecGetArrayF90 subroutine. If it's >>>>>>> called >>>>>>> >>>>>>> call DMDAVecGetArrayF90(da_u,u_local,u_array,ierr) >>>>>>> >>>>>>> I get the error below. I have no problem with my code on other >>>>>>> clusters >>>>>>> using >>>>>>> the new Intel compilers. I used to have problems with DM when using >>>>>>> the >>>>>>> old >>>>>>> Intel compilers. Now on the K computer, I'm using Fujitsu's Fortran >>>>>>> compiler. >>>>>>> How can I troubleshoot? >>>>>>> >>>>>>> Btw, I also tested on the ex13f90 example and it didn't work too. The >>>>>>> error is >>>>>>> below. >>>>>>> >>>>>>> >>>>>>> My code error: >>>>>>> >>>>>>> /* size_x,size_y,size_z 76x130x136*//* >>>>>>> *//* total grid size = 1343680*//* >>>>>>> *//* recommended cores (50k / core) = 26.87360000000000*//* >>>>>>> *//* 0*//* >>>>>>> *//* 1*//* >>>>>>> *//* 1*//* >>>>>>> *//*[3]PETSC ERROR: [1]PETSC ERROR: >>>>>>> ------------------------------------------------------------------------*//* >>>>>>> *//*[1]PETSC ERROR: Caught signal number 11 SEGV: Segmentation >>>>>>> Violation, >>>>>>> probably memory access out of range*//* >>>>>>> *//*[1]PETSC ERROR: Try option -start_in_debugger or >>>>>>> -on_error_attach_debugger*//* >>>>>>> *//*[1]PETSC ERROR: or see >>>>>>> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* >>>>>>> *//*[1]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple >>>>>>> Mac >>>>>>> OS X >>>>>>> to find memory corruption errors*//* >>>>>>> *//*[1]PETSC ERROR: likely location of problem given in stack >>>>>>> below*//* >>>>>>> *//*[1]PETSC ERROR: --------------------- Stack Frames >>>>>>> ------------------------------------*//* >>>>>>> *//*[1]PETSC ERROR: Note: The EXACT line numbers in the stack are not >>>>>>> available,*//* >>>>>>> *//*[1]PETSC ERROR: INSTEAD the line number of the start of the >>>>>>> function*//* >>>>>>> *//*[1]PETSC ERROR: is given.*//* >>>>>>> *//*[1]PETSC ERROR: [1] F90Array3dCreate line 244 >>>>>>> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* >>>>>>> *//* 1*//* >>>>>>> *//*------------------------------------------------------------------------*//* >>>>>>> *//*[3]PETSC ERROR: Caught signal number 11 SEGV: Segmentation >>>>>>> Violation, >>>>>>> probably memory access out of range*//* >>>>>>> *//*[3]PETSC ERROR: Try option -start_in_debugger or >>>>>>> -on_error_attach_debugger*//* >>>>>>> *//*[3]PETSC ERROR: or see >>>>>>> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* >>>>>>> *//*[3]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple >>>>>>> Mac >>>>>>> OS X >>>>>>> to find memory corruption errors*//* >>>>>>> *//*[3]PETSC ERROR: likely location of problem given in stack >>>>>>> below*//* >>>>>>> *//*[3]PETSC ERROR: --------------------- Stack Frames >>>>>>> ------------------------------------*//* >>>>>>> *//*[0]PETSC ERROR: >>>>>>> ------------------------------------------------------------------------*//* >>>>>>> *//*[0]PETSC ERROR: Caught signal number 11 SEGV: Segmentation >>>>>>> Violation, >>>>>>> probably memory access out of range*//* >>>>>>> *//*[0]PETSC ERROR: Try option -start_in_debugger or >>>>>>> -on_error_attach_debugger*//* >>>>>>> *//*[0]PETSC ERROR: or see >>>>>>> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* >>>>>>> *//*[0]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple >>>>>>> Mac >>>>>>> OS X >>>>>>> to find memory corruption errors*//* >>>>>>> *//*[0]PETSC ERROR: likely location of problem given in stack >>>>>>> below*//* >>>>>>> *//*[0]PETSC ERROR: --------------------- Stack Frames >>>>>>> ------------------------------------*//* >>>>>>> *//*[0]PETSC ERROR: Note: The EXACT line numbers in the stack are not >>>>>>> available,*//* >>>>>>> *//*[0]PETSC ERROR: INSTEAD the line number of the start of the >>>>>>> function*//* >>>>>>> *//*[0]PETSC ERROR: is given.*//* >>>>>>> *//*[0]PETSC ERROR: [0] F90Array3dCreate line 244 >>>>>>> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* >>>>>>> *//*[0]PETSC ERROR: --------------------- Error Message >>>>>>> ----------------------------------------- 1*//* >>>>>>> *//*[2]PETSC ERROR: >>>>>>> ------------------------------------------------------------------------*//* >>>>>>> *//*[2]PETSC ERROR: Caught signal number 11 SEGV: Segmentation >>>>>>> Violation, >>>>>>> probably memory access out of range*//* >>>>>>> *//*[2]PETSC ERROR: Try option -start_in_debugger or >>>>>>> -on_error_attach_debugger*//* >>>>>>> *//*[2]PETSC ERROR: or see >>>>>>> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* >>>>>>> *//*[2]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple >>>>>>> Mac >>>>>>> OS X >>>>>>> to find memory corruption errors*//* >>>>>>> *//*[2]PETSC ERROR: likely location of problem given in stack >>>>>>> below*//* >>>>>>> *//*[2]PETSC ERROR: --------------------- Stack Frames >>>>>>> ------------------------------------*//* >>>>>>> *//*[2]PETSC ERROR: Note: The EXACT line numbers in the stack are not >>>>>>> available,*//* >>>>>>> *//*[2]PETSC ERROR: INSTEAD the line number of the start of the >>>>>>> function*//* >>>>>>> *//*[2]PETSC ERROR: is given.*//* >>>>>>> *//*[2]PETSC ERROR: [2] F90Array3dCreate line 244 >>>>>>> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* >>>>>>> *//*[2]PETSC ERROR: --------------------- Error Message >>>>>>> -----------------------------------------[3]PETSC ERROR: Note: The >>>>>>> EXACT >>>>>>> line >>>>>>> numbers in the stack are not available,*//* >>>>>>> *//*[3]PETSC ERROR: INSTEAD the line number of the start of the >>>>>>> function*//* >>>>>>> *//*[3]PETSC ERROR: is given.*//* >>>>>>> *//*[3]PETSC ERROR: [3] F90Array3dCreate line 244 >>>>>>> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* >>>>>>> *//*[3]PETSC ERROR: --------------------- Error Message >>>>>>> --------------------------------------------------------------*//* >>>>>>> *//*[3]PETSC ERROR: Signal received*//* >>>>>>> *//*[3]PETSC ERROR: See >>>>>>> http://www.mcs.anl.gov/petsc/documentation/faq.html >>>>>>> for trouble shooting.*//* >>>>>>> *//*[3]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015*//* >>>>>>> *//*[3]PETSC ERROR: ./a-debug.out on a petsc-3.6.3_debug named b04-036 >>>>>>> by >>>>>>> Unknown Wed Jun 1 12:54:34 2016*//* >>>>>>> *//*[3]PETSC ERROR: Configure options --with-cc=mpifcc >>>>>>> --with-cxx=mpiFCC >>>>>>> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg >>>>>>> -O0" >>>>>>> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" >>>>>>> --LD_SHARED= >>>>>>> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >>>>>>> --with-shared----------------------*//* >>>>>>> *//*[0]PETSC ERROR: Signal received*//* >>>>>>> *//*[0]PETSC ERROR: See >>>>>>> http://www.mcs.anl.gov/petsc/documentation/faq.html >>>>>>> for trouble shooting.*//* >>>>>>> *//*[0]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015*//* >>>>>>> *//*[0]PETSC ERROR: ./a-debug.out on a petsc-3.6.3_debug named b04-036 >>>>>>> by >>>>>>> Unknown Wed Jun 1 12:54:34 2016*//* >>>>>>> *//*[0]PETSC ERROR: Configure options --with-cc=mpifcc >>>>>>> --with-cxx=mpiFCC >>>>>>> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg >>>>>>> -O0" >>>>>>> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" >>>>>>> --LD_SHARED= >>>>>>> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >>>>>>> --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 >>>>>>> --with-scalapack-lib=-SCALAPACK >>>>>>> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >>>>>>> --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 >>>>>>> --with-hypre=1 >>>>>>> --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4*//* >>>>>>> *//*[0]PETSC ERROR: #1 User provided function() line 0 in unknown >>>>>>> file*//* >>>>>>> *//*--------------------------------------------------------------------------*//* >>>>>>> *//*[m---------------------*//* >>>>>>> *//*[2]PETSC ERROR: Signal received*//* >>>>>>> *//*[2]PETSC ERROR: See >>>>>>> http://www.mcs.anl.gov/petsc/documentation/faq.html >>>>>>> for trouble shooting.*//* >>>>>>> *//*[2]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015*//* >>>>>>> *//*[2]PETSC ERROR: ./a-debug.out on a petsc-3.6.3_debug named b04-036 >>>>>>> by >>>>>>> Unknown Wed Jun 1 12:54:34 2016*//* >>>>>>> *//*[2]PETSC ERROR: Configure options --with-cc=mpifcc >>>>>>> --with-cxx=mpiFCC >>>>>>> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg >>>>>>> -O0" >>>>>>> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" >>>>>>> --LD_SHARED= >>>>>>> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >>>>>>> --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 >>>>>>> --with-scalapack-lib=-SCALAPACK >>>>>>> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >>>>>>> --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 >>>>>>> --with-hypre=1 >>>>>>> --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4*//* >>>>>>> *//*[2]PETSC ERROR: #1 User provided function() line 0 in unknown >>>>>>> file*//* >>>>>>> *//*--------------------------------------------------------------------------*//* >>>>>>> *//*[m[1]PETSC ERROR: --------------------- Error Message >>>>>>> --------------------------------------------------------------*//* >>>>>>> *//*[1]PETSC ERROR: Signal received*//* >>>>>>> *//*[1]PETSC ERROR: See >>>>>>> http://www.mcs.anl.gov/petsc/documentation/faq.html >>>>>>> for trouble shooting.*//* >>>>>>> *//*[1]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015*//* >>>>>>> *//*[1]PETSC ERROR: ./a-debug.out on a petsc-3.6.3_debug named b04-036 >>>>>>> by >>>>>>> Unknown Wed Jun 1 12:54:34 2016*//* >>>>>>> *//*[1]PETSC ERROR: Configure options --with-cc=mpifcc >>>>>>> --with-cxx=mpiFCC >>>>>>> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg >>>>>>> -O0" >>>>>>> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" >>>>>>> --LD_SHARED= >>>>>>> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >>>>>>> --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 >>>>>>> --with-scalapack-lib=-SCALAPACK >>>>>>> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >>>>>>> --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 >>>>>>> --with-hypre=1 >>>>>>> --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4*//* >>>>>>> *//*[1]PETSC ERROR: #1 User provided function() line 0 ilibraries=0 >>>>>>> --with-blas-lapack-lib=-SSL2 --with-scalapack-lib=-SCALAPACK >>>>>>> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >>>>>>> --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 >>>>>>> --with-hypre=1 >>>>>>> --with-hypre-dir=/home/hp150306/t00196/lib/hypre-2.10.0b-p4*//* >>>>>>> *//*[3]PETSC ERROR: #1 User provided function() line 0 in unknown >>>>>>> file*//* >>>>>>> *//*--------------------------------------------------------------------------*//* >>>>>>> *//*[mpi::mpi-api::mpi-abort]*//* >>>>>>> *//*MPI_ABORT was invoked on rank 3 in communicator MPI_COMM_WORLD*//* >>>>>>> *//*with errorcode 59.*//* >>>>>>> *//* >>>>>>> *//*NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI >>>>>>> processes.*//* >>>>>>> *//*You may or may not see output from other processes, depending >>>>>>> on*//* >>>>>>> *//*exactly when Open MPI kills them.*//* >>>>>>> *//*--------------------------------------------------------------------------*//* >>>>>>> *//*[b04-036:28416] >>>>>>> /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(orte_errmgr_base_error_abort+0x84) >>>>>>> [0xffffffff11360404]*//* >>>>>>> *//*[b04-036:28416] >>>>>>> /opt/FJSVtclang/GM-1.2.0-20/lib64/libmpi.so.0(ompi_mpi_abort+0x51c) >>>>>>> [0xffffffff1110391c]*//* >>>>>>> *//*[b04-036:28416] >>>>>>> /opt/FJSVtclang/GM-1.2.0-2pi::mpi-api::mpi-abort]*//* >>>>>>> *//*MPI_ABORT was invoked on rank 2 in communicator MPI_COMM_WORLD*//* >>>>>>> *//*with errorcode 59.*/ >>>>>>> >>>>>>> ex13f90 error: >>>>>>> >>>>>>> >>>>>>> /*[t00196 at b04-036 tutorials]$ mpiexec -np 2 ./ex13f90*//* >>>>>>> *//*jwe1050i-w The hardware barrier couldn't be used and continues >>>>>>> processing >>>>>>> using the software barrier.*//* >>>>>>> *//*taken to (standard) corrective action, execution continuing.*//* >>>>>>> *//*jwe1050i-w The hardware barrier couldn't be used and continues >>>>>>> processing >>>>>>> using the software barrier.*//* >>>>>>> *//*taken to (standard) corrective action, execution continuing.*//* >>>>>>> *//* Hi! We're solving van der Pol using 2 processes.*//* >>>>>>> *//* >>>>>>> *//* t x1 x2*//* >>>>>>> *//*[1]PETSC ERROR: >>>>>>> ------------------------------------------------------------------------*//* >>>>>>> *//*[1]PETSC ERROR: Caught signal number 10 BUS: Bus Error, possibly >>>>>>> illegal >>>>>>> memory access*//* >>>>>>> *//*[1]PETSC ERROR: Try option -start_in_debugger or >>>>>>> -on_error_attach_debugger*//* >>>>>>> *//*[0]PETSC ERROR: >>>>>>> ------------------------------------------------------------------------*//* >>>>>>> *//*[0]PETSC ERROR: Caught signal number 10 BUS: Bus Error, possibly >>>>>>> illegal >>>>>>> memory access*//* >>>>>>> *//*[0]PETSC ERROR: Try option -start_in_debugger or >>>>>>> -on_error_attach_debugger*//* >>>>>>> *//*[0]PETSC ERROR: or see >>>>>>> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* >>>>>>> *//*[0]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple >>>>>>> Mac >>>>>>> OS X >>>>>>> to find memory corruption errors*//* >>>>>>> *//*[1]PETSC ERROR: or see >>>>>>> http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind*//* >>>>>>> *//*[1]PETSC ERROR: or tryhttp://valgrind.org on GNU/linux and Apple >>>>>>> Mac >>>>>>> OS X >>>>>>> to find memory corruption errors*//* >>>>>>> *//*[1]PETSC ERROR: likely location of problem given in stack >>>>>>> below*//* >>>>>>> *//*[1]PETSC ERROR: --------------------- Stack Frames >>>>>>> ------------------------------------*//* >>>>>>> *//*[1]PETSC ERROR: Note: The EXACT line numbers in the stack are not >>>>>>> available,*//* >>>>>>> *//*[1]PETSC ERROR: INSTEAD the line number of the start of the >>>>>>> function*//* >>>>>>> *//*[1]PETSC ERROR: is given.*//* >>>>>>> *//*[1]PETSC ERROR: [1] F90Array4dCreate line 337 >>>>>>> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* >>>>>>> *//*[0]PETSC ERROR: likely location of problem given in stack >>>>>>> below*//* >>>>>>> *//*[0]PETSC ERROR: --------------------- Stack Frames >>>>>>> ------------------------------------*//* >>>>>>> *//*[0]PETSC ERROR: Note: The EXACT line numbers in the stack are not >>>>>>> available,*//* >>>>>>> *//*[0]PETSC ERROR: INSTEAD the line number of the start of the >>>>>>> function*//* >>>>>>> *//*[0]PETSC ERROR: is given.*//* >>>>>>> *//*[0]PETSC ERROR: [0] F90Array4dCreate line 337 >>>>>>> /.global/volume2/home/hp150306/t00196/source/petsc-3.6.3/src/sys/f90-src/f90_cwrap.c*//* >>>>>>> *//*[1]PETSC ERROR: --------------------- Error Message >>>>>>> --------------------------------------------------------------*//* >>>>>>> *//*[1]PETSC ERROR: Signal received*//* >>>>>>> *//*[1]PETSC ERROR: See >>>>>>> http://www.mcs.anl.gov/petsc/documentation/faq.html >>>>>>> for trouble shooting.*//* >>>>>>> *//*[1]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015*//* >>>>>>> *//*[1]PETSC ERROR: ./ex13f90 on a petsc-3.6.3_debug named b04-036 by >>>>>>> Unknown >>>>>>> Wed Jun 1 13:04:34 2016*//* >>>>>>> *//*[1]PETSC ERROR: Configure options --with-cc=mpifcc >>>>>>> --with-cxx=mpiFCC >>>>>>> --with-fc=mpifrt --with-64-bit-pointers=1 --CC=mpifcc --CFLAGS="-Xg >>>>>>> -O0" >>>>>>> --CXX=mpiFCC --CXXFLAGS="-Xg -O0" --FC=mpifrt --FFLAGS="-X9 -O0" >>>>>>> --LD_SHARED= >>>>>>> --LDDFLAGS= --with-openmp=1 --with-mpiexec=mpiexec --known-endian=big >>>>>>> --with-shared-libraries=0 --with-blas-lapack-lib=-SSL2 >>>>>>> --with-scalapack-lib=-SCALAPACK >>>>>>> --prefix=/home/hp150306/t00196/lib/petsc-3.6.3_debug >>>>>>> --with-fortran-interfaces=1 --with-debugging=1 --useThreads=0 >>>>>>> --with-hypre=1 >>>>>>> --with-hyp*//* >>>>>>> */ >>>>>>> >>>>>>> >>>>>>> >>> > From xzhao99 at gmail.com Fri Jun 10 11:43:32 2016 From: xzhao99 at gmail.com (Xujun Zhao) Date: Fri, 10 Jun 2016 11:43:32 -0500 Subject: [petsc-users] KSPSolve errors on blues In-Reply-To: References: <08D69A43-29A0-4037-9780-6DD95C59249B@mcs.anl.gov> Message-ID: I found that this was caused by using -fieldsplit_0_pc_type hypre, which ate a lot of memory during the KSPSolve(). Does hypre use BoomerAMG as the default pc type? I am curious why it uses such a huge memory. PETSs allocated mem is about 22G, but the total process memory is up to 100G. So it looks like the additional 70+G is associated with hypre, which is more than 3 times of Petsc matrices and vectors! -Xujun On Wed, Jun 8, 2016 at 4:29 PM, Xujun Zhao wrote: > OK, this makes sense. > Now my libMesh code use SerialMesh, which keeps a copy on each processor, > although the operation is parallelized. So it requires more memory if > multiple CPUs are used. This may be a potential culprit. But I suppose the > 60x60x60 mesh data(all second order) shouldn't be so large.... there may be > some other bugs > > On Wed, Jun 8, 2016 at 4:18 PM, Barry Smith wrote: > >> >> > On Jun 8, 2016, at 4:08 PM, Xujun Zhao wrote: >> > >> > Barry, >> > >> > Thank you. I am testing on the blues. >> > btw, what do they mean for the different types of memory usage? for >> example, below is the summary of mem usage for 60x60x60(with 2.9M dofs). >> The max process memory is 3 times as the max space PetscMalloc()ed. >> >> PetscMalloced is basically the PETSc data structures; Process memory >> is size of the program plus PETSc malloced space plus space allocated by >> any other library, in this case libMesh. It looks like libMesh is requiring >> a lot of space? >> >> Barry >> >> > >> > Summary of Memory Usage in PETSc >> > Maximum (over computational time) process memory: total >> 1.0930e+11 max 5.6928e+10 min 5.2376e+10 >> > Current process memory: >> total 3.1762e+09 max 2.8804e+09 min 2.9583e+08 >> > Maximum (over computational time) space PetscMalloc()ed: total >> 3.0071e+10 max 1.5286e+10 min 1.4785e+10 >> > Current space PetscMalloc()ed: >> total 1.5453e+05 max 7.7264e+04 min 7.7264e+04 >> > >> > >> > >> > On Wed, Jun 8, 2016 at 1:40 PM, Barry Smith wrote: >> > >> > > On Jun 8, 2016, at 1:30 PM, Xujun Zhao wrote: >> > > >> > > A quick test of a smaller system on my laptop with 25x25x25 mesh >> gives the following info. >> > > The memory used keeps increasing from 1 to 3 CPUs, but slightly >> decreases with 4 CPUs. >> > >> > yes this does not look problematic >> > >> > > On the other hand, 60x60x60 mesh (2.9M dofs) is also not a big >> system... >> > >> > True. >> > >> > I think you need to run the 60 60 60 system also on 1 2 4 and 8 >> processes to see how the memory trends. I don't think we should eliminate >> memory as the culprit yet. >> > >> > >> > Barry >> > >> > > >> > > >> > > ------------------------------------------------- 1 CPU >> ------------------------------------------------- >> > > Summary of Memory Usage in PETSc >> > > Maximum (over computational time) process memory: total >> 4.7054e+09 max 4.7054e+09 min 4.7054e+09 >> > > Current process memory: >> total 4.7054e+09 max 4.7054e+09 min 4.7054e+09 >> > > Maximum (over computational time) space PetscMalloc()ed: total >> 1.6151e+09 max 1.6151e+09 min 1.6151e+09 >> > > Current space PetscMalloc()ed: >> total 7.7232e+04 max 7.7232e+04 min 7.7232e+04 >> > > >> > > ------------------------------------------------- 2 CPU >> ------------------------------------------------- >> > > Summary of Memory Usage in PETSc >> > > Maximum (over computational time) process memory: total >> 6.2389e+09 max 3.1275e+09 min 3.1113e+09 >> > > Current process memory: >> total 6.2389e+09 max 3.1275e+09 min 3.1113e+09 >> > > Maximum (over computational time) space PetscMalloc()ed: total >> 2.1589e+09 max 1.1193e+09 min 1.0397e+09 >> > > Current space PetscMalloc()ed: >> total 1.5446e+05 max 7.7232e+04 min 7.7232e+04 >> > > >> > > ------------------------------------------------- 3 CPU >> ------------------------------------------------- >> > > Summary of Memory Usage in PETSc >> > > Maximum (over computational time) process memory: total >> 7.7116e+09 max 1.9572e+09 min 1.8715e+09 >> > > Current process memory: >> total 7.7116e+09 max 1.9572e+09 min 1.8715e+09 >> > > Maximum (over computational time) space PetscMalloc()ed: total >> 2.1754e+09 max 5.8450e+08 min 5.0516e+08 >> > > Current space PetscMalloc()ed: >> total 3.0893e+05 max 7.7232e+04 min 7.7232e+04 >> > > >> > > ------------------------------------------------- 4 CPU >> ------------------------------------------------- >> > > Summary of Memory Usage in PETSc >> > > Maximum (over computational time) process memory: total >> 7.1188e+09 max 2.4651e+09 min 2.2909e+09 >> > > Current process memory: >> total 7.1188e+09 max 2.4651e+09 min 2.2909e+09 >> > > Maximum (over computational time) space PetscMalloc()ed: total >> 2.1750e+09 max 7.6982e+08 min 6.5289e+08 >> > > Current space PetscMalloc()ed: >> total 2.3170e+05 max 7.7232e+04 min 7.7232e+04 >> > > >> > > >> > > On Wed, Jun 8, 2016 at 11:51 AM, Barry Smith >> wrote: >> > > >> > > Signal 9 SIGKILL on batch systems usually means the process was >> killed because it ran out of time or ran out of memory. >> > > >> > > Perhaps there is something in the code that is unscalable and >> requires more more memory with more processes. You can run on 1 2 and 3 >> processes and measure the memory usage to see if it goes up with the number >> of processes using for example -memory_view >> > > >> > > Barry >> > > >> > > >> > > >> > > > On Jun 8, 2016, at 11:41 AM, Xujun Zhao wrote: >> > > > >> > > > Hi all, >> > > > >> > > > I am running a FE Stokes Solver with schur complement type PC on >> blues. The program runs well when mesh is 40X40X40 (0.88M dofs), but when I >> use 60X60X60 mesh, the program crashes and gives out some errors, which >> looks like a segmentation fault. The "strange" thing is that it runs well >> with 1CPU, 2CPUs, but fails on 4 or 8 CPUs. The log files are also >> attached. It seems like the global matrix and vector are assembled well, >> and errors come out before calling the KSPSolve(). >> > > > >> > > > btw, I use the recent PETSc 3.7 dbg version. for libMesh I use both >> dbg and opt version, but none of those can give useful information. Has >> anyone met such situations before? Many thinks. >> > > > >> > > >> > > >> > >> > >> >> > -------------- next part -------------- An HTML attachment was scrubbed... URL: From bsmith at mcs.anl.gov Fri Jun 10 12:07:04 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Fri, 10 Jun 2016 12:07:04 -0500 Subject: [petsc-users] KSPSolve errors on blues In-Reply-To: References: <08D69A43-29A0-4037-9780-6DD95C59249B@mcs.anl.gov> Message-ID: <1E415A49-A9EC-4685-BE48-C3A576F92FFF@mcs.anl.gov> > On Jun 10, 2016, at 11:43 AM, Xujun Zhao wrote: > > I found that this was caused by using -fieldsplit_0_pc_type hypre, which ate a lot of memory during the KSPSolve(). > Does hypre use BoomerAMG as the default pc type? Yes > I am curious why it uses such a huge memory. PETSs allocated mem is about 22G, but the total process memory is up to 100G. So it looks like the additional 70+G is associated with hypre, which is more than 3 times of Petsc matrices and vectors! You can try -fieldsplit_0_pc_type gamg and see how that goes memory-wise. The memory used by GAMG will be listed as PETSc allocated memory. Barry > > -Xujun > > On Wed, Jun 8, 2016 at 4:29 PM, Xujun Zhao wrote: > OK, this makes sense. > Now my libMesh code use SerialMesh, which keeps a copy on each processor, although the operation is parallelized. So it requires more memory if multiple CPUs are used. This may be a potential culprit. But I suppose the 60x60x60 mesh data(all second order) shouldn't be so large.... there may be some other bugs > > On Wed, Jun 8, 2016 at 4:18 PM, Barry Smith wrote: > > > On Jun 8, 2016, at 4:08 PM, Xujun Zhao wrote: > > > > Barry, > > > > Thank you. I am testing on the blues. > > btw, what do they mean for the different types of memory usage? for example, below is the summary of mem usage for 60x60x60(with 2.9M dofs). The max process memory is 3 times as the max space PetscMalloc()ed. > > PetscMalloced is basically the PETSc data structures; Process memory is size of the program plus PETSc malloced space plus space allocated by any other library, in this case libMesh. It looks like libMesh is requiring a lot of space? > > Barry > > > > > Summary of Memory Usage in PETSc > > Maximum (over computational time) process memory: total 1.0930e+11 max 5.6928e+10 min 5.2376e+10 > > Current process memory: total 3.1762e+09 max 2.8804e+09 min 2.9583e+08 > > Maximum (over computational time) space PetscMalloc()ed: total 3.0071e+10 max 1.5286e+10 min 1.4785e+10 > > Current space PetscMalloc()ed: total 1.5453e+05 max 7.7264e+04 min 7.7264e+04 > > > > > > > > On Wed, Jun 8, 2016 at 1:40 PM, Barry Smith wrote: > > > > > On Jun 8, 2016, at 1:30 PM, Xujun Zhao wrote: > > > > > > A quick test of a smaller system on my laptop with 25x25x25 mesh gives the following info. > > > The memory used keeps increasing from 1 to 3 CPUs, but slightly decreases with 4 CPUs. > > > > yes this does not look problematic > > > > > On the other hand, 60x60x60 mesh (2.9M dofs) is also not a big system... > > > > True. > > > > I think you need to run the 60 60 60 system also on 1 2 4 and 8 processes to see how the memory trends. I don't think we should eliminate memory as the culprit yet. > > > > > > Barry > > > > > > > > > > > ------------------------------------------------- 1 CPU ------------------------------------------------- > > > Summary of Memory Usage in PETSc > > > Maximum (over computational time) process memory: total 4.7054e+09 max 4.7054e+09 min 4.7054e+09 > > > Current process memory: total 4.7054e+09 max 4.7054e+09 min 4.7054e+09 > > > Maximum (over computational time) space PetscMalloc()ed: total 1.6151e+09 max 1.6151e+09 min 1.6151e+09 > > > Current space PetscMalloc()ed: total 7.7232e+04 max 7.7232e+04 min 7.7232e+04 > > > > > > ------------------------------------------------- 2 CPU ------------------------------------------------- > > > Summary of Memory Usage in PETSc > > > Maximum (over computational time) process memory: total 6.2389e+09 max 3.1275e+09 min 3.1113e+09 > > > Current process memory: total 6.2389e+09 max 3.1275e+09 min 3.1113e+09 > > > Maximum (over computational time) space PetscMalloc()ed: total 2.1589e+09 max 1.1193e+09 min 1.0397e+09 > > > Current space PetscMalloc()ed: total 1.5446e+05 max 7.7232e+04 min 7.7232e+04 > > > > > > ------------------------------------------------- 3 CPU ------------------------------------------------- > > > Summary of Memory Usage in PETSc > > > Maximum (over computational time) process memory: total 7.7116e+09 max 1.9572e+09 min 1.8715e+09 > > > Current process memory: total 7.7116e+09 max 1.9572e+09 min 1.8715e+09 > > > Maximum (over computational time) space PetscMalloc()ed: total 2.1754e+09 max 5.8450e+08 min 5.0516e+08 > > > Current space PetscMalloc()ed: total 3.0893e+05 max 7.7232e+04 min 7.7232e+04 > > > > > > ------------------------------------------------- 4 CPU ------------------------------------------------- > > > Summary of Memory Usage in PETSc > > > Maximum (over computational time) process memory: total 7.1188e+09 max 2.4651e+09 min 2.2909e+09 > > > Current process memory: total 7.1188e+09 max 2.4651e+09 min 2.2909e+09 > > > Maximum (over computational time) space PetscMalloc()ed: total 2.1750e+09 max 7.6982e+08 min 6.5289e+08 > > > Current space PetscMalloc()ed: total 2.3170e+05 max 7.7232e+04 min 7.7232e+04 > > > > > > > > > On Wed, Jun 8, 2016 at 11:51 AM, Barry Smith wrote: > > > > > > Signal 9 SIGKILL on batch systems usually means the process was killed because it ran out of time or ran out of memory. > > > > > > Perhaps there is something in the code that is unscalable and requires more more memory with more processes. You can run on 1 2 and 3 processes and measure the memory usage to see if it goes up with the number of processes using for example -memory_view > > > > > > Barry > > > > > > > > > > > > > On Jun 8, 2016, at 11:41 AM, Xujun Zhao wrote: > > > > > > > > Hi all, > > > > > > > > I am running a FE Stokes Solver with schur complement type PC on blues. The program runs well when mesh is 40X40X40 (0.88M dofs), but when I use 60X60X60 mesh, the program crashes and gives out some errors, which looks like a segmentation fault. The "strange" thing is that it runs well with 1CPU, 2CPUs, but fails on 4 or 8 CPUs. The log files are also attached. It seems like the global matrix and vector are assembled well, and errors come out before calling the KSPSolve(). > > > > > > > > btw, I use the recent PETSc 3.7 dbg version. for libMesh I use both dbg and opt version, but none of those can give useful information. Has anyone met such situations before? Many thinks. > > > > > > > > > > > > > > > > > From xzhao99 at gmail.com Fri Jun 10 14:04:05 2016 From: xzhao99 at gmail.com (Xujun Zhao) Date: Fri, 10 Jun 2016 14:04:05 -0500 Subject: [petsc-users] KSPSolve errors on blues In-Reply-To: <1E415A49-A9EC-4685-BE48-C3A576F92FFF@mcs.anl.gov> References: <08D69A43-29A0-4037-9780-6DD95C59249B@mcs.anl.gov> <1E415A49-A9EC-4685-BE48-C3A576F92FFF@mcs.anl.gov> Message-ID: Using gamg makes the convergence super slow (I don't know why) --->test in StokesSolver::solve(): Start the KSP solve... 0 KSP Residual norm 5.077511671295e+01 1 KSP Residual norm 2.902020348172e+01 2 KSP Residual norm 2.034415002085e+01 3 KSP Residual norm 1.525150176412e+01 4 KSP Residual norm 1.332688121023e+01 5 KSP Residual norm 1.178298922349e+01 .................................. 28 KSP Residual norm 1.300489085085e+00 29 KSP Residual norm 1.200176938138e+00 30 KSP Residual norm 1.087425787854e+00 In addition, I found the process memory is less than PetscMalloc(). Should the process memory usage be the PETScMalloc + others? So the former should be more than the later. Summary of Memory Usage in PETSc Maximum (over computational time) process memory: total 1.4316e+10 max 3.7933e+09 min 3.4463e+09 Current process memory: total 1.4316e+10 max 3.7933e+09 min 3.4463e+09 Maximum (over computational time) space PetscMalloc()ed: total 6.5987e+10 max 1.7018e+10 min 1.5901e+10 Current space PetscMalloc()ed: total 3.0957e+05 max 7.7392e+04 min 7.7392e+04 On Fri, Jun 10, 2016 at 12:07 PM, Barry Smith wrote: > > > On Jun 10, 2016, at 11:43 AM, Xujun Zhao wrote: > > > > I found that this was caused by using -fieldsplit_0_pc_type hypre, which > ate a lot of memory during the KSPSolve(). > > Does hypre use BoomerAMG as the default pc type? > > Yes > > > I am curious why it uses such a huge memory. PETSs allocated mem is > about 22G, but the total process memory is up to 100G. So it looks like the > additional 70+G is associated with hypre, which is more than 3 times of > Petsc matrices and vectors! > > You can try -fieldsplit_0_pc_type gamg and see how that goes > memory-wise. The memory used by GAMG will be listed as PETSc allocated > memory. > > Barry > > > > > -Xujun > > > > On Wed, Jun 8, 2016 at 4:29 PM, Xujun Zhao wrote: > > OK, this makes sense. > > Now my libMesh code use SerialMesh, which keeps a copy on each > processor, although the operation is parallelized. So it requires more > memory if multiple CPUs are used. This may be a potential culprit. But I > suppose the 60x60x60 mesh data(all second order) shouldn't be so large.... > there may be some other bugs > > > > On Wed, Jun 8, 2016 at 4:18 PM, Barry Smith wrote: > > > > > On Jun 8, 2016, at 4:08 PM, Xujun Zhao wrote: > > > > > > Barry, > > > > > > Thank you. I am testing on the blues. > > > btw, what do they mean for the different types of memory usage? for > example, below is the summary of mem usage for 60x60x60(with 2.9M dofs). > The max process memory is 3 times as the max space PetscMalloc()ed. > > > > PetscMalloced is basically the PETSc data structures; Process memory > is size of the program plus PETSc malloced space plus space allocated by > any other library, in this case libMesh. It looks like libMesh is requiring > a lot of space? > > > > Barry > > > > > > > > Summary of Memory Usage in PETSc > > > Maximum (over computational time) process memory: total > 1.0930e+11 max 5.6928e+10 min 5.2376e+10 > > > Current process memory: > total 3.1762e+09 max 2.8804e+09 min 2.9583e+08 > > > Maximum (over computational time) space PetscMalloc()ed: total > 3.0071e+10 max 1.5286e+10 min 1.4785e+10 > > > Current space PetscMalloc()ed: > total 1.5453e+05 max 7.7264e+04 min 7.7264e+04 > > > > > > > > > > > > On Wed, Jun 8, 2016 at 1:40 PM, Barry Smith > wrote: > > > > > > > On Jun 8, 2016, at 1:30 PM, Xujun Zhao wrote: > > > > > > > > A quick test of a smaller system on my laptop with 25x25x25 mesh > gives the following info. > > > > The memory used keeps increasing from 1 to 3 CPUs, but slightly > decreases with 4 CPUs. > > > > > > yes this does not look problematic > > > > > > > On the other hand, 60x60x60 mesh (2.9M dofs) is also not a big > system... > > > > > > True. > > > > > > I think you need to run the 60 60 60 system also on 1 2 4 and 8 > processes to see how the memory trends. I don't think we should eliminate > memory as the culprit yet. > > > > > > > > > Barry > > > > > > > > > > > > > > > ------------------------------------------------- 1 CPU > ------------------------------------------------- > > > > Summary of Memory Usage in PETSc > > > > Maximum (over computational time) process memory: total > 4.7054e+09 max 4.7054e+09 min 4.7054e+09 > > > > Current process memory: > total 4.7054e+09 max 4.7054e+09 min 4.7054e+09 > > > > Maximum (over computational time) space PetscMalloc()ed: total > 1.6151e+09 max 1.6151e+09 min 1.6151e+09 > > > > Current space PetscMalloc()ed: > total 7.7232e+04 max 7.7232e+04 min 7.7232e+04 > > > > > > > > ------------------------------------------------- 2 CPU > ------------------------------------------------- > > > > Summary of Memory Usage in PETSc > > > > Maximum (over computational time) process memory: total > 6.2389e+09 max 3.1275e+09 min 3.1113e+09 > > > > Current process memory: > total 6.2389e+09 max 3.1275e+09 min 3.1113e+09 > > > > Maximum (over computational time) space PetscMalloc()ed: total > 2.1589e+09 max 1.1193e+09 min 1.0397e+09 > > > > Current space PetscMalloc()ed: > total 1.5446e+05 max 7.7232e+04 min 7.7232e+04 > > > > > > > > ------------------------------------------------- 3 CPU > ------------------------------------------------- > > > > Summary of Memory Usage in PETSc > > > > Maximum (over computational time) process memory: total > 7.7116e+09 max 1.9572e+09 min 1.8715e+09 > > > > Current process memory: > total 7.7116e+09 max 1.9572e+09 min 1.8715e+09 > > > > Maximum (over computational time) space PetscMalloc()ed: total > 2.1754e+09 max 5.8450e+08 min 5.0516e+08 > > > > Current space PetscMalloc()ed: > total 3.0893e+05 max 7.7232e+04 min 7.7232e+04 > > > > > > > > ------------------------------------------------- 4 CPU > ------------------------------------------------- > > > > Summary of Memory Usage in PETSc > > > > Maximum (over computational time) process memory: total > 7.1188e+09 max 2.4651e+09 min 2.2909e+09 > > > > Current process memory: > total 7.1188e+09 max 2.4651e+09 min 2.2909e+09 > > > > Maximum (over computational time) space PetscMalloc()ed: total > 2.1750e+09 max 7.6982e+08 min 6.5289e+08 > > > > Current space PetscMalloc()ed: > total 2.3170e+05 max 7.7232e+04 min 7.7232e+04 > > > > > > > > > > > > On Wed, Jun 8, 2016 at 11:51 AM, Barry Smith > wrote: > > > > > > > > Signal 9 SIGKILL on batch systems usually means the process was > killed because it ran out of time or ran out of memory. > > > > > > > > Perhaps there is something in the code that is unscalable and > requires more more memory with more processes. You can run on 1 2 and 3 > processes and measure the memory usage to see if it goes up with the number > of processes using for example -memory_view > > > > > > > > Barry > > > > > > > > > > > > > > > > > On Jun 8, 2016, at 11:41 AM, Xujun Zhao wrote: > > > > > > > > > > Hi all, > > > > > > > > > > I am running a FE Stokes Solver with schur complement type PC on > blues. The program runs well when mesh is 40X40X40 (0.88M dofs), but when I > use 60X60X60 mesh, the program crashes and gives out some errors, which > looks like a segmentation fault. The "strange" thing is that it runs well > with 1CPU, 2CPUs, but fails on 4 or 8 CPUs. The log files are also > attached. It seems like the global matrix and vector are assembled well, > and errors come out before calling the KSPSolve(). > > > > > > > > > > btw, I use the recent PETSc 3.7 dbg version. for libMesh I use > both dbg and opt version, but none of those can give useful information. > Has anyone met such situations before? Many thinks. > > > > > > > > > > > > > > > > > > > > > > > > > > > -------------- next part -------------- An HTML attachment was scrubbed... URL: From bsmith at mcs.anl.gov Fri Jun 10 14:53:20 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Fri, 10 Jun 2016 14:53:20 -0500 Subject: [petsc-users] KSPSolve errors on blues In-Reply-To: References: <08D69A43-29A0-4037-9780-6DD95C59249B@mcs.anl.gov> <1E415A49-A9EC-4685-BE48-C3A576F92FFF@mcs.anl.gov> Message-ID: <34F94392-EED7-42AD-A558-B3CE73D7D1FD@mcs.anl.gov> > On Jun 10, 2016, at 2:04 PM, Xujun Zhao wrote: > > Using gamg makes the convergence super slow (I don't know why) > > --->test in StokesSolver::solve(): Start the KSP solve... > 0 KSP Residual norm 5.077511671295e+01 > 1 KSP Residual norm 2.902020348172e+01 > 2 KSP Residual norm 2.034415002085e+01 > 3 KSP Residual norm 1.525150176412e+01 > 4 KSP Residual norm 1.332688121023e+01 > 5 KSP Residual norm 1.178298922349e+01 > .................................. > 28 KSP Residual norm 1.300489085085e+00 > 29 KSP Residual norm 1.200176938138e+00 > 30 KSP Residual norm 1.087425787854e+00 > > > > In addition, I found the process memory is less than PetscMalloc(). Should the process memory usage be the PETScMalloc + others? Yes, normally process would be more than what was PetscMalloced. The case when PetscMalloc is smaller would be when some of the space that was PetscMalloced but was never used (say for example I allocate an array with 10 million entries but only access the first 100 entries; memory pages are created on-demand in unix so no pages would be allocated for most of the array hence the process memory would be less than the PetscMalloced memory.) So what conclusions did you reach from this 1) hypre is using a lot of memory more than GAMG? (only look at process memory) Is this confirmed? 2) gamg is converging very poorly compared to hypre? This is not good, can you run with -fieldsplit_0_ksp_view_mat and send the resulting binary file to petsc-maint at mcs.anl.gov so we can see if we can figure out why hypre is doing much better than gamg on the matrix. 3) somewhere in gamg it is allocating much larger memory regions then is needed. This is actually not surprising since with sparse matrix algorithms such as R A R^T one doesn't know in advance the memory needed and has to make upper bound estimates. Barry > So the former should be more than the later. > > Summary of Memory Usage in PETSc > Maximum (over computational time) process memory: total 1.4316e+10 max 3.7933e+09 min 3.4463e+09 > Current process memory: total 1.4316e+10 max 3.7933e+09 min 3.4463e+09 > Maximum (over computational time) space PetscMalloc()ed: total 6.5987e+10 max 1.7018e+10 min 1.5901e+10 > Current space PetscMalloc()ed: total 3.0957e+05 max 7.7392e+04 min 7.7392e+04 > > On Fri, Jun 10, 2016 at 12:07 PM, Barry Smith wrote: > > > On Jun 10, 2016, at 11:43 AM, Xujun Zhao wrote: > > > > I found that this was caused by using -fieldsplit_0_pc_type hypre, which ate a lot of memory during the KSPSolve(). > > Does hypre use BoomerAMG as the default pc type? > > Yes > > > I am curious why it uses such a huge memory. PETSs allocated mem is about 22G, but the total process memory is up to 100G. So it looks like the additional 70+G is associated with hypre, which is more than 3 times of Petsc matrices and vectors! > > You can try -fieldsplit_0_pc_type gamg and see how that goes memory-wise. The memory used by GAMG will be listed as PETSc allocated memory. > > Barry > > > > > -Xujun > > > > On Wed, Jun 8, 2016 at 4:29 PM, Xujun Zhao wrote: > > OK, this makes sense. > > Now my libMesh code use SerialMesh, which keeps a copy on each processor, although the operation is parallelized. So it requires more memory if multiple CPUs are used. This may be a potential culprit. But I suppose the 60x60x60 mesh data(all second order) shouldn't be so large.... there may be some other bugs > > > > On Wed, Jun 8, 2016 at 4:18 PM, Barry Smith wrote: > > > > > On Jun 8, 2016, at 4:08 PM, Xujun Zhao wrote: > > > > > > Barry, > > > > > > Thank you. I am testing on the blues. > > > btw, what do they mean for the different types of memory usage? for example, below is the summary of mem usage for 60x60x60(with 2.9M dofs). The max process memory is 3 times as the max space PetscMalloc()ed. > > > > PetscMalloced is basically the PETSc data structures; Process memory is size of the program plus PETSc malloced space plus space allocated by any other library, in this case libMesh. It looks like libMesh is requiring a lot of space? > > > > Barry > > > > > > > > Summary of Memory Usage in PETSc > > > Maximum (over computational time) process memory: total 1.0930e+11 max 5.6928e+10 min 5.2376e+10 > > > Current process memory: total 3.1762e+09 max 2.8804e+09 min 2.9583e+08 > > > Maximum (over computational time) space PetscMalloc()ed: total 3.0071e+10 max 1.5286e+10 min 1.4785e+10 > > > Current space PetscMalloc()ed: total 1.5453e+05 max 7.7264e+04 min 7.7264e+04 > > > > > > > > > > > > On Wed, Jun 8, 2016 at 1:40 PM, Barry Smith wrote: > > > > > > > On Jun 8, 2016, at 1:30 PM, Xujun Zhao wrote: > > > > > > > > A quick test of a smaller system on my laptop with 25x25x25 mesh gives the following info. > > > > The memory used keeps increasing from 1 to 3 CPUs, but slightly decreases with 4 CPUs. > > > > > > yes this does not look problematic > > > > > > > On the other hand, 60x60x60 mesh (2.9M dofs) is also not a big system... > > > > > > True. > > > > > > I think you need to run the 60 60 60 system also on 1 2 4 and 8 processes to see how the memory trends. I don't think we should eliminate memory as the culprit yet. > > > > > > > > > Barry > > > > > > > > > > > > > > > ------------------------------------------------- 1 CPU ------------------------------------------------- > > > > Summary of Memory Usage in PETSc > > > > Maximum (over computational time) process memory: total 4.7054e+09 max 4.7054e+09 min 4.7054e+09 > > > > Current process memory: total 4.7054e+09 max 4.7054e+09 min 4.7054e+09 > > > > Maximum (over computational time) space PetscMalloc()ed: total 1.6151e+09 max 1.6151e+09 min 1.6151e+09 > > > > Current space PetscMalloc()ed: total 7.7232e+04 max 7.7232e+04 min 7.7232e+04 > > > > > > > > ------------------------------------------------- 2 CPU ------------------------------------------------- > > > > Summary of Memory Usage in PETSc > > > > Maximum (over computational time) process memory: total 6.2389e+09 max 3.1275e+09 min 3.1113e+09 > > > > Current process memory: total 6.2389e+09 max 3.1275e+09 min 3.1113e+09 > > > > Maximum (over computational time) space PetscMalloc()ed: total 2.1589e+09 max 1.1193e+09 min 1.0397e+09 > > > > Current space PetscMalloc()ed: total 1.5446e+05 max 7.7232e+04 min 7.7232e+04 > > > > > > > > ------------------------------------------------- 3 CPU ------------------------------------------------- > > > > Summary of Memory Usage in PETSc > > > > Maximum (over computational time) process memory: total 7.7116e+09 max 1.9572e+09 min 1.8715e+09 > > > > Current process memory: total 7.7116e+09 max 1.9572e+09 min 1.8715e+09 > > > > Maximum (over computational time) space PetscMalloc()ed: total 2.1754e+09 max 5.8450e+08 min 5.0516e+08 > > > > Current space PetscMalloc()ed: total 3.0893e+05 max 7.7232e+04 min 7.7232e+04 > > > > > > > > ------------------------------------------------- 4 CPU ------------------------------------------------- > > > > Summary of Memory Usage in PETSc > > > > Maximum (over computational time) process memory: total 7.1188e+09 max 2.4651e+09 min 2.2909e+09 > > > > Current process memory: total 7.1188e+09 max 2.4651e+09 min 2.2909e+09 > > > > Maximum (over computational time) space PetscMalloc()ed: total 2.1750e+09 max 7.6982e+08 min 6.5289e+08 > > > > Current space PetscMalloc()ed: total 2.3170e+05 max 7.7232e+04 min 7.7232e+04 > > > > > > > > > > > > On Wed, Jun 8, 2016 at 11:51 AM, Barry Smith wrote: > > > > > > > > Signal 9 SIGKILL on batch systems usually means the process was killed because it ran out of time or ran out of memory. > > > > > > > > Perhaps there is something in the code that is unscalable and requires more more memory with more processes. You can run on 1 2 and 3 processes and measure the memory usage to see if it goes up with the number of processes using for example -memory_view > > > > > > > > Barry > > > > > > > > > > > > > > > > > On Jun 8, 2016, at 11:41 AM, Xujun Zhao wrote: > > > > > > > > > > Hi all, > > > > > > > > > > I am running a FE Stokes Solver with schur complement type PC on blues. The program runs well when mesh is 40X40X40 (0.88M dofs), but when I use 60X60X60 mesh, the program crashes and gives out some errors, which looks like a segmentation fault. The "strange" thing is that it runs well with 1CPU, 2CPUs, but fails on 4 or 8 CPUs. The log files are also attached. It seems like the global matrix and vector are assembled well, and errors come out before calling the KSPSolve(). > > > > > > > > > > btw, I use the recent PETSc 3.7 dbg version. for libMesh I use both dbg and opt version, but none of those can give useful information. Has anyone met such situations before? Many thinks. > > > > > > > > > > > > > > > > > > > > > > > > > > > From xzhao99 at gmail.com Fri Jun 10 15:45:21 2016 From: xzhao99 at gmail.com (Xujun Zhao) Date: Fri, 10 Jun 2016 15:45:21 -0500 Subject: [petsc-users] KSPSolve errors on blues In-Reply-To: <34F94392-EED7-42AD-A558-B3CE73D7D1FD@mcs.anl.gov> References: <08D69A43-29A0-4037-9780-6DD95C59249B@mcs.anl.gov> <1E415A49-A9EC-4685-BE48-C3A576F92FFF@mcs.anl.gov> <34F94392-EED7-42AD-A558-B3CE73D7D1FD@mcs.anl.gov> Message-ID: On Fri, Jun 10, 2016 at 2:53 PM, Barry Smith wrote: > > > On Jun 10, 2016, at 2:04 PM, Xujun Zhao wrote: > > > > Using gamg makes the convergence super slow (I don't know why) > > > > --->test in StokesSolver::solve(): Start the KSP solve... > > 0 KSP Residual norm 5.077511671295e+01 > > 1 KSP Residual norm 2.902020348172e+01 > > 2 KSP Residual norm 2.034415002085e+01 > > 3 KSP Residual norm 1.525150176412e+01 > > 4 KSP Residual norm 1.332688121023e+01 > > 5 KSP Residual norm 1.178298922349e+01 > > .................................. > > 28 KSP Residual norm 1.300489085085e+00 > > 29 KSP Residual norm 1.200176938138e+00 > > 30 KSP Residual norm 1.087425787854e+00 > > > > > > > > In addition, I found the process memory is less than PetscMalloc(). > Should the process memory usage be the PETScMalloc + others? > > Yes, normally process would be more than what was PetscMalloced. The > case when PetscMalloc is smaller would be when some of the space that was > PetscMalloced but was never used (say for example I allocate an array with > 10 million entries but only access the first 100 entries; memory pages are > created on-demand in unix so no pages would be allocated for most of the > array hence the process memory would be less than the PetscMalloced memory.) > > So what conclusions did you reach from this > > 1) hypre is using a lot of memory more than GAMG? (only look at process > memory) Is this confirmed? > In this example, yes. > > 2) gamg is converging very poorly compared to hypre? This is not good, can > you run with -fieldsplit_0_ksp_view_mat and send the resulting binary file > to petsc-maint at mcs.anl.gov so we can see if we can figure out why hypre > is doing much better than gamg on the matrix. > Again yes, only for this specific example and pc setup, especially when fine mesh is used. Will do. > > 3) somewhere in gamg it is allocating much larger memory regions then is > needed. This is actually not surprising since with sparse matrix algorithms > such as R A R^T one doesn't know in advance the memory needed and has to > make upper bound estimates. > > Barry > > > > > > > > So the former should be more than the later. > > > > Summary of Memory Usage in PETSc > > Maximum (over computational time) process memory: total > 1.4316e+10 max 3.7933e+09 min 3.4463e+09 > > Current process memory: total > 1.4316e+10 max 3.7933e+09 min 3.4463e+09 > > Maximum (over computational time) space PetscMalloc()ed: total > 6.5987e+10 max 1.7018e+10 min 1.5901e+10 > > Current space PetscMalloc()ed: total > 3.0957e+05 max 7.7392e+04 min 7.7392e+04 > > > > On Fri, Jun 10, 2016 at 12:07 PM, Barry Smith > wrote: > > > > > On Jun 10, 2016, at 11:43 AM, Xujun Zhao wrote: > > > > > > I found that this was caused by using -fieldsplit_0_pc_type hypre, > which ate a lot of memory during the KSPSolve(). > > > Does hypre use BoomerAMG as the default pc type? > > > > Yes > > > > > I am curious why it uses such a huge memory. PETSs allocated mem is > about 22G, but the total process memory is up to 100G. So it looks like the > additional 70+G is associated with hypre, which is more than 3 times of > Petsc matrices and vectors! > > > > You can try -fieldsplit_0_pc_type gamg and see how that goes > memory-wise. The memory used by GAMG will be listed as PETSc allocated > memory. > > > > Barry > > > > > > > > -Xujun > > > > > > On Wed, Jun 8, 2016 at 4:29 PM, Xujun Zhao wrote: > > > OK, this makes sense. > > > Now my libMesh code use SerialMesh, which keeps a copy on each > processor, although the operation is parallelized. So it requires more > memory if multiple CPUs are used. This may be a potential culprit. But I > suppose the 60x60x60 mesh data(all second order) shouldn't be so large.... > there may be some other bugs > > > > > > On Wed, Jun 8, 2016 at 4:18 PM, Barry Smith > wrote: > > > > > > > On Jun 8, 2016, at 4:08 PM, Xujun Zhao wrote: > > > > > > > > Barry, > > > > > > > > Thank you. I am testing on the blues. > > > > btw, what do they mean for the different types of memory usage? for > example, below is the summary of mem usage for 60x60x60(with 2.9M dofs). > The max process memory is 3 times as the max space PetscMalloc()ed. > > > > > > PetscMalloced is basically the PETSc data structures; Process > memory is size of the program plus PETSc malloced space plus space > allocated by any other library, in this case libMesh. It looks like libMesh > is requiring a lot of space? > > > > > > Barry > > > > > > > > > > > Summary of Memory Usage in PETSc > > > > Maximum (over computational time) process memory: total > 1.0930e+11 max 5.6928e+10 min 5.2376e+10 > > > > Current process memory: > total 3.1762e+09 max 2.8804e+09 min 2.9583e+08 > > > > Maximum (over computational time) space PetscMalloc()ed: total > 3.0071e+10 max 1.5286e+10 min 1.4785e+10 > > > > Current space PetscMalloc()ed: > total 1.5453e+05 max 7.7264e+04 min 7.7264e+04 > > > > > > > > > > > > > > > > On Wed, Jun 8, 2016 at 1:40 PM, Barry Smith > wrote: > > > > > > > > > On Jun 8, 2016, at 1:30 PM, Xujun Zhao wrote: > > > > > > > > > > A quick test of a smaller system on my laptop with 25x25x25 mesh > gives the following info. > > > > > The memory used keeps increasing from 1 to 3 CPUs, but slightly > decreases with 4 CPUs. > > > > > > > > yes this does not look problematic > > > > > > > > > On the other hand, 60x60x60 mesh (2.9M dofs) is also not a big > system... > > > > > > > > True. > > > > > > > > I think you need to run the 60 60 60 system also on 1 2 4 and 8 > processes to see how the memory trends. I don't think we should eliminate > memory as the culprit yet. > > > > > > > > > > > > Barry > > > > > > > > > > > > > > > > > > > ------------------------------------------------- 1 CPU > ------------------------------------------------- > > > > > Summary of Memory Usage in PETSc > > > > > Maximum (over computational time) process memory: total > 4.7054e+09 max 4.7054e+09 min 4.7054e+09 > > > > > Current process memory: > total 4.7054e+09 max 4.7054e+09 min 4.7054e+09 > > > > > Maximum (over computational time) space PetscMalloc()ed: total > 1.6151e+09 max 1.6151e+09 min 1.6151e+09 > > > > > Current space PetscMalloc()ed: > total 7.7232e+04 max 7.7232e+04 min 7.7232e+04 > > > > > > > > > > ------------------------------------------------- 2 CPU > ------------------------------------------------- > > > > > Summary of Memory Usage in PETSc > > > > > Maximum (over computational time) process memory: total > 6.2389e+09 max 3.1275e+09 min 3.1113e+09 > > > > > Current process memory: > total 6.2389e+09 max 3.1275e+09 min 3.1113e+09 > > > > > Maximum (over computational time) space PetscMalloc()ed: total > 2.1589e+09 max 1.1193e+09 min 1.0397e+09 > > > > > Current space PetscMalloc()ed: > total 1.5446e+05 max 7.7232e+04 min 7.7232e+04 > > > > > > > > > > ------------------------------------------------- 3 CPU > ------------------------------------------------- > > > > > Summary of Memory Usage in PETSc > > > > > Maximum (over computational time) process memory: total > 7.7116e+09 max 1.9572e+09 min 1.8715e+09 > > > > > Current process memory: > total 7.7116e+09 max 1.9572e+09 min 1.8715e+09 > > > > > Maximum (over computational time) space PetscMalloc()ed: total > 2.1754e+09 max 5.8450e+08 min 5.0516e+08 > > > > > Current space PetscMalloc()ed: > total 3.0893e+05 max 7.7232e+04 min 7.7232e+04 > > > > > > > > > > ------------------------------------------------- 4 CPU > ------------------------------------------------- > > > > > Summary of Memory Usage in PETSc > > > > > Maximum (over computational time) process memory: total > 7.1188e+09 max 2.4651e+09 min 2.2909e+09 > > > > > Current process memory: > total 7.1188e+09 max 2.4651e+09 min 2.2909e+09 > > > > > Maximum (over computational time) space PetscMalloc()ed: total > 2.1750e+09 max 7.6982e+08 min 6.5289e+08 > > > > > Current space PetscMalloc()ed: > total 2.3170e+05 max 7.7232e+04 min 7.7232e+04 > > > > > > > > > > > > > > > On Wed, Jun 8, 2016 at 11:51 AM, Barry Smith > wrote: > > > > > > > > > > Signal 9 SIGKILL on batch systems usually means the process was > killed because it ran out of time or ran out of memory. > > > > > > > > > > Perhaps there is something in the code that is unscalable and > requires more more memory with more processes. You can run on 1 2 and 3 > processes and measure the memory usage to see if it goes up with the number > of processes using for example -memory_view > > > > > > > > > > Barry > > > > > > > > > > > > > > > > > > > > > On Jun 8, 2016, at 11:41 AM, Xujun Zhao > wrote: > > > > > > > > > > > > Hi all, > > > > > > > > > > > > I am running a FE Stokes Solver with schur complement type PC on > blues. The program runs well when mesh is 40X40X40 (0.88M dofs), but when I > use 60X60X60 mesh, the program crashes and gives out some errors, which > looks like a segmentation fault. The "strange" thing is that it runs well > with 1CPU, 2CPUs, but fails on 4 or 8 CPUs. The log files are also > attached. It seems like the global matrix and vector are assembled well, > and errors come out before calling the KSPSolve(). > > > > > > > > > > > > btw, I use the recent PETSc 3.7 dbg version. for libMesh I use > both dbg and opt version, but none of those can give useful information. > Has anyone met such situations before? Many thinks. > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > -------------- next part -------------- An HTML attachment was scrubbed... URL: From faraz_hussain at yahoo.com Fri Jun 10 15:56:34 2016 From: faraz_hussain at yahoo.com (Faraz Hussain) Date: Fri, 10 Jun 2016 20:56:34 +0000 (UTC) Subject: [petsc-users] Receiving DIVERGED_PCSETUP_FAILED In-Reply-To: References: <2128383548.499195.1465504363992.JavaMail.yahoo.ref@mail.yahoo.com> <2128383548.499195.1465504363992.JavaMail.yahoo@mail.yahoo.com> Message-ID: <981355317.1071825.1465592194420.JavaMail.yahoo@mail.yahoo.com> Thanks for the suggestions. I checked but was not able to find out how to change the mumps row pivot threshold of 1e-06. Maybe I will ask on the mumps user forum. Regarding: ?> You need to look at the condition number just before GMRES reaches the restart. It has to start all over again at the restart. So what was the estimated condition number at 999 iterations? I ran again and the condition number at 999 iterations is: 999 KSP preconditioned resid norm 5.921717188418e-02 true resid norm 5.921717188531e-02 ||r(i)||/||b|| 4.187286380279e-03 999 KSP Residual norm 5.921717188418e-02 % max 1.070338898624e+05 min 1.002755075294e-01 max/min 1.067398136390e+06 From: Barry Smith To: Faraz Hussain Cc: "petsc-users at mcs.anl.gov" Sent: Thursday, June 9, 2016 5:56 PM Subject: Re: [petsc-users] Receiving DIVERGED_PCSETUP_FAILED > On Jun 9, 2016, at 3:32 PM, Faraz Hussain wrote: > > I have been following ex52.c ksp/ksp/examples/tutorials to use MUMPS to directly solve Ax=b. My matrix is symmetric and positive definite. I built a small cantilever beam model with matrix of 5000^2 size. It solves in 2 seconds and gives correct answer. But when I use a finer mesh of the cantilever beam with 3.3 million^2 matrix, I get the following error: > >? Mumps row pivot threshhold = 1e-06 ? Maybe you can change this to get MUMPS to pivot less aggressively. Doing lots of pivoting will require a lot more memory. In theory since it is SPD it should not need to pivot at all. >? Mumps determinant = (0., 0.) * 2^0 > Linear solve did not converge due to DIVERGED_PCSETUP_FAILED iterations 0 >? ? ? ? ? ? ? PCSETUP_FAILED due to FACTOR_OUTMEMORY > Norm of error inf. iterations 0 > > It runs for more than an hour before aborting with this message. I am running it with this command: > > mpiexec -hostfile ./hostfile -np 48 ./ex12 -ksp_converged_reason > > My machines have 24 cpus and 125GB Ram. When I do "top" I see it correctly spans 48 processes on 2 nodes. The memory usage of each process is no more than 1-2GB. So I do not understand why it gives FACTOR_OUTMEMORY ? > > The same matrix solves in under 5 minutes in Intel Pardiso using 24 cpus on one host. ? Mumps may be (likely?) is using a different matrix ordering then Intel Pardiso. Unfortunately each of these packages have a different way of asking for orderings and different orderings to chose from so you will need to look at the details for each package. > I thought maybe mumps thinks it is ill-conditioned? The model does converge in the iterative solver in 4000 iterations. I also tried running with these options per the FAQ on > > " How can I determine the condition number of a matrix? ". > > mpiexec -hostfile ./hostfile -np 48 ./ex12 -pc_type none -ksp_type gmres -ksp_monitor_singular_value -ksp_gmres_restart 1000 -ksp_converged_reason -ksp_monitor_true_residual > > After 1337 iterations I cancelled it, and the output was: ? You need to look at the condition number just before GMRES reaches the restart. It has to start all over again at the restart. So what was the estimated condition number at 999 iterations? ? It could be that Intel Pardiso produced a low quality solution if the matrix is ill conditioned. You can run with -ksp_type gmres -ksp_max_it 5 -ksp_monitor_true_residual with -pc_type lu to see how small the residuals are after the "direct" solver. ? Barry > > 1337 KSP preconditioned resid norm 5.647402411074e-02 true resid norm 5.647402411074e-02 ||r(i)||/||b|| 3.993316540960e-03 > 1337 KSP Residual norm 5.647402411074e-02 % max 1.070324243277e+05 min 1.220336631740e-01 max/min 8.770729448238e+05 -------------- next part -------------- An HTML attachment was scrubbed... URL: From bsmith at mcs.anl.gov Fri Jun 10 16:02:13 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Fri, 10 Jun 2016 16:02:13 -0500 Subject: [petsc-users] Receiving DIVERGED_PCSETUP_FAILED In-Reply-To: <981355317.1071825.1465592194420.JavaMail.yahoo@mail.yahoo.com> References: <2128383548.499195.1465504363992.JavaMail.yahoo.ref@mail.yahoo.com> <2128383548.499195.1465504363992.JavaMail.yahoo@mail.yahoo.com> <981355317.1071825.1465592194420.JavaMail.yahoo@mail.yahoo.com> Message-ID: <37772537-072B-4F76-AB97-EB9DFD336DB3@mcs.anl.gov> > On Jun 10, 2016, at 3:56 PM, Faraz Hussain wrote: > > Thanks for the suggestions. I checked but was not able to find out how to change the mumps row pivot threshold of 1e-06. Maybe I will ask on the mumps user forum. This might help. ierr = PetscOptionsReal("-mat_mumps_cntl_1","CNTL(1): relative pivoting threshold","None",mumps->id.CNTL(1),&mumps->id.CNTL(1),NULL);CHKERRQ(ierr); ierr = PetscOptionsReal("-mat_mumps_cntl_2","CNTL(2): stopping criterion of refinement","None",mumps->id.CNTL(2),&mumps->id.CNTL(2),NULL);CHKERRQ(ierr); ierr = PetscOptionsReal("-mat_mumps_cntl_3","CNTL(3): absolute pivoting threshold","None",mumps->id.CNTL(3),&mumps->id.CNTL(3),NULL);CHKERRQ(ierr); ierr = PetscOptionsReal("-mat_mumps_cntl_4","CNTL(4): value for static pivoting","None",mumps->id.CNTL(4),&mumps->id.CNTL(4),NULL);CHKERRQ(ierr); Note I don't know what they mean so you need to read the mumps docs. > Regarding: > > > You need to look at the condition number just before GMRES reaches the restart. It has to start all over again at the restart. So what was the estimated condition number at 999 iterations? > > I ran again and the condition number at 999 iterations is: > > 999 KSP preconditioned resid norm 5.921717188418e-02 true resid norm 5.921717188531e-02 ||r(i)||/||b|| 4.187286380279e-03 > 999 KSP Residual norm 5.921717188418e-02 % max 1.070338898624e+05 min 1.002755075294e-01 max/min 1.067398136390e+06 Ok, so relatively ill-conditioned matrix. But seemingly not terrible. Barry > > > From: Barry Smith > To: Faraz Hussain > Cc: "petsc-users at mcs.anl.gov" > Sent: Thursday, June 9, 2016 5:56 PM > Subject: Re: [petsc-users] Receiving DIVERGED_PCSETUP_FAILED > > > > On Jun 9, 2016, at 3:32 PM, Faraz Hussain wrote: > > > > I have been following ex52.c ksp/ksp/examples/tutorials to use MUMPS to directly solve Ax=b. My matrix is symmetric and positive definite. I built a small cantilever beam model with matrix of 5000^2 size. It solves in 2 seconds and gives correct answer. But when I use a finer mesh of the cantilever beam with 3.3 million^2 matrix, I get the following error: > > > > Mumps row pivot threshhold = 1e-06 > > Maybe you can change this to get MUMPS to pivot less aggressively. Doing lots of pivoting will require a lot more memory. In theory since it is SPD it should not need to pivot at all. > > > Mumps determinant = (0., 0.) * 2^0 > > Linear solve did not converge due to DIVERGED_PCSETUP_FAILED iterations 0 > > PCSETUP_FAILED due to FACTOR_OUTMEMORY > > Norm of error inf. iterations 0 > > > > It runs for more than an hour before aborting with this message. I am running it with this command: > > > > mpiexec -hostfile ./hostfile -np 48 ./ex12 -ksp_converged_reason > > > > My machines have 24 cpus and 125GB Ram. When I do "top" I see it correctly spans 48 processes on 2 nodes. The memory usage of each process is no more than 1-2GB. So I do not understand why it gives FACTOR_OUTMEMORY ? > > > > The same matrix solves in under 5 minutes in Intel Pardiso using 24 cpus on one host. > > Mumps may be (likely?) is using a different matrix ordering then Intel Pardiso. Unfortunately each of these packages have a different way of asking for orderings and different orderings to chose from so you will need to look at the details for each package. > > > I thought maybe mumps thinks it is ill-conditioned? The model does converge in the iterative solver in 4000 iterations. I also tried running with these options per the FAQ on > > > > " How can I determine the condition number of a matrix? ". > > > > mpiexec -hostfile ./hostfile -np 48 ./ex12 -pc_type none -ksp_type gmres -ksp_monitor_singular_value -ksp_gmres_restart 1000 -ksp_converged_reason -ksp_monitor_true_residual > > > > After 1337 iterations I cancelled it, and the output was: > > You need to look at the condition number just before GMRES reaches the restart. It has to start all over again at the restart. So what was the estimated condition number at 999 iterations? > > It could be that Intel Pardiso produced a low quality solution if the matrix is ill conditioned. You can run with -ksp_type gmres -ksp_max_it 5 -ksp_monitor_true_residual with -pc_type lu to see how small the residuals are after the "direct" solver. > > Barry > > > > > > 1337 KSP preconditioned resid norm 5.647402411074e-02 true resid norm 5.647402411074e-02 ||r(i)||/||b|| 3.993316540960e-03 > > 1337 KSP Residual norm 5.647402411074e-02 % max 1.070324243277e+05 min 1.220336631740e-01 max/min 8.770729448238e+05 > > From faraz_hussain at yahoo.com Fri Jun 10 17:27:20 2016 From: faraz_hussain at yahoo.com (Faraz Hussain) Date: Fri, 10 Jun 2016 22:27:20 +0000 (UTC) Subject: [petsc-users] Receiving DIVERGED_PCSETUP_FAILED In-Reply-To: <37772537-072B-4F76-AB97-EB9DFD336DB3@mcs.anl.gov> References: <2128383548.499195.1465504363992.JavaMail.yahoo.ref@mail.yahoo.com> <2128383548.499195.1465504363992.JavaMail.yahoo@mail.yahoo.com> <981355317.1071825.1465592194420.JavaMail.yahoo@mail.yahoo.com> <37772537-072B-4F76-AB97-EB9DFD336DB3@mcs.anl.gov> Message-ID: <966124275.1153241.1465597641003.JavaMail.yahoo@mail.yahoo.com> I think the issue is I need to play more with the "parrallel" settings here. http://www.mcs.anl.gov/petsc/petsc-current/docs/manualpages/Mat/MATSOLVERMUMPS.html The example 52.c was based on sequential running. So doing mpiexec -np 48, was basically just using one processor. I also never installed parmetis, metis or ptscotch. Will install and adjust the MUMPS settings and hopefully will get it to converge this weekend! From: Barry Smith To: Faraz Hussain Cc: "petsc-users at mcs.anl.gov" Sent: Friday, June 10, 2016 4:02 PM Subject: Re: [petsc-users] Receiving DIVERGED_PCSETUP_FAILED > On Jun 10, 2016, at 3:56 PM, Faraz Hussain wrote: > > Thanks for the suggestions. I checked but was not able to find out how to change the mumps row pivot threshold of 1e-06. Maybe I will ask on the mumps user forum. This might help. ? ierr = PetscOptionsReal("-mat_mumps_cntl_1","CNTL(1): relative pivoting threshold","None",mumps->id.CNTL(1),&mumps->id.CNTL(1),NULL);CHKERRQ(ierr); ? ierr = PetscOptionsReal("-mat_mumps_cntl_2","CNTL(2): stopping criterion of refinement","None",mumps->id.CNTL(2),&mumps->id.CNTL(2),NULL);CHKERRQ(ierr); ? ierr = PetscOptionsReal("-mat_mumps_cntl_3","CNTL(3): absolute pivoting threshold","None",mumps->id.CNTL(3),&mumps->id.CNTL(3),NULL);CHKERRQ(ierr); ? ierr = PetscOptionsReal("-mat_mumps_cntl_4","CNTL(4): value for static pivoting","None",mumps->id.CNTL(4),&mumps->id.CNTL(4),NULL);CHKERRQ(ierr); Note I don't know what they mean so you need to read the mumps docs. > Regarding: > >? > You need to look at the condition number just before GMRES reaches the restart. It has to start all over again at the restart. So what was the estimated condition number at 999 iterations? > > I ran again and the condition number at 999 iterations is: > > 999 KSP preconditioned resid norm 5.921717188418e-02 true resid norm 5.921717188531e-02 ||r(i)||/||b|| 4.187286380279e-03 > 999 KSP Residual norm 5.921717188418e-02 % max 1.070338898624e+05 min 1.002755075294e-01 max/min 1.067398136390e+06 Ok, so relatively ill-conditioned matrix. But seemingly not terrible. ? Barry > > > From: Barry Smith > To: Faraz Hussain > Cc: "petsc-users at mcs.anl.gov" > Sent: Thursday, June 9, 2016 5:56 PM > Subject: Re: [petsc-users] Receiving DIVERGED_PCSETUP_FAILED > > > > On Jun 9, 2016, at 3:32 PM, Faraz Hussain wrote: > > > > I have been following ex52.c ksp/ksp/examples/tutorials to use MUMPS to directly solve Ax=b. My matrix is symmetric and positive definite. I built a small cantilever beam model with matrix of 5000^2 size. It solves in 2 seconds and gives correct answer. But when I use a finer mesh of the cantilever beam with 3.3 million^2 matrix, I get the following error: > > > >? Mumps row pivot threshhold = 1e-06 > >? Maybe you can change this to get MUMPS to pivot less aggressively. Doing lots of pivoting will require a lot more memory. In theory since it is SPD it should not need to pivot at all. > > >? Mumps determinant = (0., 0.) * 2^0 > > Linear solve did not converge due to DIVERGED_PCSETUP_FAILED iterations 0 > >? ? ? ? ? ? ? PCSETUP_FAILED due to FACTOR_OUTMEMORY > > Norm of error inf. iterations 0 > > > > It runs for more than an hour before aborting with this message. I am running it with this command: > > > > mpiexec -hostfile ./hostfile -np 48 ./ex12 -ksp_converged_reason > > > > My machines have 24 cpus and 125GB Ram. When I do "top" I see it correctly spans 48 processes on 2 nodes. The memory usage of each process is no more than 1-2GB. So I do not understand why it gives FACTOR_OUTMEMORY ? > > > > The same matrix solves in under 5 minutes in Intel Pardiso using 24 cpus on one host. > >? Mumps may be (likely?) is using a different matrix ordering then Intel Pardiso. Unfortunately each of these packages have a different way of asking for orderings and different orderings to chose from so you will need to look at the details for each package. > > > I thought maybe mumps thinks it is ill-conditioned? The model does converge in the iterative solver in 4000 iterations. I also tried running with these options per the FAQ on > > > > " How can I determine the condition number of a matrix? ". > > > > mpiexec -hostfile ./hostfile -np 48 ./ex12 -pc_type none -ksp_type gmres -ksp_monitor_singular_value -ksp_gmres_restart 1000 -ksp_converged_reason -ksp_monitor_true_residual > > > > After 1337 iterations I cancelled it, and the output was: > >? You need to look at the condition number just before GMRES reaches the restart. It has to start all over again at the restart. So what was the estimated condition number at 999 iterations? > >? It could be that Intel Pardiso produced a low quality solution if the matrix is ill conditioned. You can run with -ksp_type gmres -ksp_max_it 5 -ksp_monitor_true_residual with -pc_type lu to see how small the residuals are after the "direct" solver. > >? Barry > > > > > > 1337 KSP preconditioned resid norm 5.647402411074e-02 true resid norm 5.647402411074e-02 ||r(i)||/||b|| 3.993316540960e-03 > > 1337 KSP Residual norm 5.647402411074e-02 % max 1.070324243277e+05 min 1.220336631740e-01 max/min 8.770729448238e+05 > > -------------- next part -------------- An HTML attachment was scrubbed... URL: From jychang48 at gmail.com Fri Jun 10 17:57:02 2016 From: jychang48 at gmail.com (Justin Chang) Date: Fri, 10 Jun 2016 17:57:02 -0500 Subject: [petsc-users] Does PETSc have these solvers bounded-constrained optimization problems? Message-ID: Hi all, Does PETSc currently have any of these solvers for bounded constraint problems: 1) Semismooth Newton methods (aka primal-dual active-set methods) 2) Projected Newton methods Trilinos' Rapid Optimization Library (ROL ) has them, and I have seen papers and books claiming that these solvers are state-of-the-art. I see there's SNESVINEWTONSSLS and TAOGPCG but are these the same as the above methods? Thanks, Justin -------------- next part -------------- An HTML attachment was scrubbed... URL: From bsmith at mcs.anl.gov Sat Jun 11 12:19:59 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Sat, 11 Jun 2016 12:19:59 -0500 Subject: [petsc-users] Does PETSc have these solvers bounded-constrained optimization problems? In-Reply-To: References: Message-ID: <7896C522-DA2F-4044-87BA-1E9F1DBA245C@mcs.anl.gov> Justin, For bound constrained optimization problems, there is: TRON -- a truncated Newton method from your favorite inventor of such methods BLMVM -- a limited memory quasi-Newton method for bound constraints (projected quasi-Newton) There used to be the KT solvers that was just a wrapper around the complementarity methods. Jason -- what happened to this? Anyways, from the gradient and Hessian (or Hessian vector product), you can apply the complementarity solvers to the optimality conditions: ASLS -- active set family (e.g. projected newton) SSLS -- semismooth family For more general constraints, there is: IPM -- interior-point method I have not used it or tested it though. For PDE constrained problems, there is: LCL -- linearly constrained augmented Lagrangian. ROL has imitations either directly copied from our code or written from our papers. > On Jun 10, 2016, at 5:57 PM, Justin Chang wrote: > > Hi all, > > Does PETSc currently have any of these solvers for bounded constraint problems: > > 1) Semismooth Newton methods (aka primal-dual active-set methods) > 2) Projected Newton methods > > Trilinos' Rapid Optimization Library (ROL) has them, and I have seen papers and books claiming that these solvers are state-of-the-art. > > I see there's SNESVINEWTONSSLS and TAOGPCG but are these the same as the above methods? > > Thanks, > Justin > > > From sospinar at unal.edu.co Sun Jun 12 01:49:11 2016 From: sospinar at unal.edu.co (Santiago Ospina De Los Rios) Date: Sun, 12 Jun 2016 01:49:11 -0500 Subject: [petsc-users] Vec application ordering to petsc ordering Message-ID: Hello there, I'm using your Application Ordering (AO) objects to switch between vectors with my application ordering to petsc ordering. I built a little routine which helps me to gather the information in the proper order: SUBROUTINE VecApplicationToPetsc(DataMngr,AppVec,ierr) IMPLICIT NONE #include #include #include #include #include #include PetscErrorCode,INTENT(INOUT) :: ierr DM,INTENT(IN) :: DataMngr Vec,INTENT(INOUT) :: AppVec ! it outs as PetscVec AO :: AppOrd PetscInt :: RangeLow,RangeHigh,i IS :: PetscIS,AppIS VecScatter :: Scatter Vec :: PetscVec ! It obtains a temporal vector to store in PETSc ordering CALL DMCreateGlobalVector(DataMngr,PetscVec,ierr) CALL AOCreate(PETSC_COMM_WORLD,AppOrd,ierr) CALL DMDAGetAO(DataMngr,AppOrd,ierr) CALL VecGetOwnershipRange(PetscVec,RangeLow,RangeHigh,ierr) CALL ISCreateGeneral(PETSC_COMM_WORLD,RangeHigh-RangeLow,(/(i,i=RangeLow,RangeHigh)/),PETSC_COPY_VALUES,PetscIS,ierr) CALL ISDuplicate(PetscIS,AppIS,ierr) CALL ISCopy(PetscIS,AppIS,ierr) CALL AOPetscToApplicationIS(AppOrd,AppIS,ierr) CALL VecScatterCreate(AppVec,AppIS,PetscVec,PetscIS,Scatter,ierr) CALL VecScatterBegin(Scatter,AppVec,PetscVec,INSERT_VALUES,SCATTER_FORWARD,ierr) CALL VecScatterEnd(Scatter,AppVec,PetscVec,INSERT_VALUES,SCATTER_FORWARD,ierr) CALL VecScatterDestroy(Scatter,ierr) CALL ISDestroy(AppIS,ierr) CALL ISDestroy(PetscIS,ierr) CALL AODestroy(AppOrd,ierr) CALL VecCopy(PetscVec,AppVec,ierr) CALL VecDestroy(PetscVec,ierr) END SUBROUTINE VecApplicationToPetsc It is working well for my purpose, but just the first time I call it; the second time I call it, the AO object give me back an error. The most obviously way to avoid it is creating AO, IS and VecScatter objects just one time, but I don't want to handle those variables through my whole program. Am I doing something wrong with the AO object? Thank you. -- -- Att: Santiago Ospina De Los R?os National University of Colombia -------------- next part -------------- An HTML attachment was scrubbed... URL: From knepley at gmail.com Sun Jun 12 02:02:15 2016 From: knepley at gmail.com (Matthew Knepley) Date: Sun, 12 Jun 2016 08:02:15 +0100 Subject: [petsc-users] Vec application ordering to petsc ordering In-Reply-To: References: Message-ID: On Sun, Jun 12, 2016 at 7:49 AM, Santiago Ospina De Los Rios < sospinar at unal.edu.co> wrote: > Hello there, > > I'm using your Application Ordering (AO) objects to switch between vectors > with my application ordering to petsc ordering. I built a little routine > which helps me to gather the information in the proper order: > > SUBROUTINE VecApplicationToPetsc(DataMngr,AppVec,ierr) > > IMPLICIT NONE > > #include > #include > #include > #include > #include > #include > > PetscErrorCode,INTENT(INOUT) :: ierr > DM,INTENT(IN) :: DataMngr > Vec,INTENT(INOUT) :: AppVec ! it outs as PetscVec > > AO :: AppOrd > PetscInt :: RangeLow,RangeHigh,i > IS :: PetscIS,AppIS > VecScatter :: Scatter > Vec :: PetscVec > > ! It obtains a temporal vector to store in PETSc ordering > CALL DMCreateGlobalVector(DataMngr,PetscVec,ierr) > CALL AOCreate(PETSC_COMM_WORLD,AppOrd,ierr) > > Here you create a new AO object > CALL DMDAGetAO(DataMngr,AppOrd,ierr) > > Here you overwrite that initial AO with the AO from the DMDA, thus leaking memory. > CALL VecGetOwnershipRange(PetscVec,RangeLow,RangeHigh,ierr) > CALL > ISCreateGeneral(PETSC_COMM_WORLD,RangeHigh-RangeLow,(/(i,i=RangeLow,RangeHigh)/),PETSC_COPY_VALUES,PetscIS,ierr) > CALL ISDuplicate(PetscIS,AppIS,ierr) > CALL ISCopy(PetscIS,AppIS,ierr) > CALL AOPetscToApplicationIS(AppOrd,AppIS,ierr) > CALL VecScatterCreate(AppVec,AppIS,PetscVec,PetscIS,Scatter,ierr) > CALL > VecScatterBegin(Scatter,AppVec,PetscVec,INSERT_VALUES,SCATTER_FORWARD,ierr) > CALL > VecScatterEnd(Scatter,AppVec,PetscVec,INSERT_VALUES,SCATTER_FORWARD,ierr) > > CALL VecScatterDestroy(Scatter,ierr) > CALL ISDestroy(AppIS,ierr) > CALL ISDestroy(PetscIS,ierr) > CALL AODestroy(AppOrd,ierr) > > Here you destroy the DMDA AO, which causes the error, but not the original AO, which causes a leak. Remove the Create/Destroy. Matt > CALL VecCopy(PetscVec,AppVec,ierr) > CALL VecDestroy(PetscVec,ierr) > > END SUBROUTINE VecApplicationToPetsc > > > It is working well for my purpose, but just the first time I call it; the > second time I call it, the AO object give me back an error. The most > obviously way to avoid it is creating AO, IS and VecScatter objects just > one time, but I don't want to handle those variables through my whole > program. > > Am I doing something wrong with the AO object? > > Thank you. > > > -- > > -- > Att: > > Santiago Ospina De Los R?os > National University of Colombia > -- What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead. -- Norbert Wiener -------------- next part -------------- An HTML attachment was scrubbed... URL: From sospinar at unal.edu.co Sun Jun 12 02:14:53 2016 From: sospinar at unal.edu.co (Santiago Ospina De Los Rios) Date: Sun, 12 Jun 2016 02:14:53 -0500 Subject: [petsc-users] Vec application ordering to petsc ordering In-Reply-To: References: Message-ID: 2016-06-12 2:02 GMT-05:00 Matthew Knepley : > On Sun, Jun 12, 2016 at 7:49 AM, Santiago Ospina De Los Rios < > sospinar at unal.edu.co> wrote: > >> Hello there, >> >> I'm using your Application Ordering (AO) objects to switch between >> vectors with my application ordering to petsc ordering. I built a little >> routine which helps me to gather the information in the proper order: >> >> SUBROUTINE VecApplicationToPetsc(DataMngr,AppVec,ierr) >> >> IMPLICIT NONE >> >> #include >> #include >> #include >> #include >> #include >> #include >> >> PetscErrorCode,INTENT(INOUT) :: ierr >> DM,INTENT(IN) :: DataMngr >> Vec,INTENT(INOUT) :: AppVec ! it outs as PetscVec >> >> AO :: AppOrd >> PetscInt :: RangeLow,RangeHigh,i >> IS :: PetscIS,AppIS >> VecScatter :: Scatter >> Vec :: PetscVec >> >> ! It obtains a temporal vector to store in PETSc ordering >> CALL DMCreateGlobalVector(DataMngr,PetscVec,ierr) >> CALL AOCreate(PETSC_COMM_WORLD,AppOrd,ierr) >> >> > Here you create a new AO object > > >> CALL DMDAGetAO(DataMngr,AppOrd,ierr) >> >> > Here you overwrite that initial AO with the AO from the DMDA, thus leaking > memory. > > >> CALL VecGetOwnershipRange(PetscVec,RangeLow,RangeHigh,ierr) >> CALL >> ISCreateGeneral(PETSC_COMM_WORLD,RangeHigh-RangeLow,(/(i,i=RangeLow,RangeHigh)/),PETSC_COPY_VALUES,PetscIS,ierr) >> CALL ISDuplicate(PetscIS,AppIS,ierr) >> CALL ISCopy(PetscIS,AppIS,ierr) >> CALL AOPetscToApplicationIS(AppOrd,AppIS,ierr) >> CALL VecScatterCreate(AppVec,AppIS,PetscVec,PetscIS,Scatter,ierr) >> CALL >> VecScatterBegin(Scatter,AppVec,PetscVec,INSERT_VALUES,SCATTER_FORWARD,ierr) >> CALL >> VecScatterEnd(Scatter,AppVec,PetscVec,INSERT_VALUES,SCATTER_FORWARD,ierr) >> >> CALL VecScatterDestroy(Scatter,ierr) >> CALL ISDestroy(AppIS,ierr) >> CALL ISDestroy(PetscIS,ierr) >> CALL AODestroy(AppOrd,ierr) >> >> > Here you destroy the DMDA AO, which causes the error, but not the original > AO, which causes a leak. > > Remove the Create/Destroy. > > It worked pretty well, thank you. But what do you mean with "original AO"? is it not supposed one have to destroy every petsc object created? Santiago O. Matt > > >> CALL VecCopy(PetscVec,AppVec,ierr) >> CALL VecDestroy(PetscVec,ierr) >> >> END SUBROUTINE VecApplicationToPetsc >> >> >> It is working well for my purpose, but just the first time I call it; the >> second time I call it, the AO object give me back an error. The most >> obviously way to avoid it is creating AO, IS and VecScatter objects just >> one time, but I don't want to handle those variables through my whole >> program. >> >> Am I doing something wrong with the AO object? >> >> Thank you. >> >> >> -- >> >> -- >> Att: >> >> Santiago Ospina De Los R?os >> National University of Colombia >> > > > > -- > What most experimenters take for granted before they begin their > experiments is infinitely more interesting than any results to which their > experiments lead. > -- Norbert Wiener > -- -- Att: Santiago Ospina De Los R?os National University of Colombia -------------- next part -------------- An HTML attachment was scrubbed... URL: From sospinar at unal.edu.co Sun Jun 12 02:20:04 2016 From: sospinar at unal.edu.co (Santiago Ospina De Los Rios) Date: Sun, 12 Jun 2016 02:20:04 -0500 Subject: [petsc-users] Vec application ordering to petsc ordering In-Reply-To: References: Message-ID: 2016-06-12 2:14 GMT-05:00 Santiago Ospina De Los Rios : > > > 2016-06-12 2:02 GMT-05:00 Matthew Knepley : > >> On Sun, Jun 12, 2016 at 7:49 AM, Santiago Ospina De Los Rios < >> sospinar at unal.edu.co> wrote: >> >>> Hello there, >>> >>> I'm using your Application Ordering (AO) objects to switch between >>> vectors with my application ordering to petsc ordering. I built a little >>> routine which helps me to gather the information in the proper order: >>> >>> SUBROUTINE VecApplicationToPetsc(DataMngr,AppVec,ierr) >>> >>> IMPLICIT NONE >>> >>> #include >>> #include >>> #include >>> #include >>> #include >>> #include >>> >>> PetscErrorCode,INTENT(INOUT) :: ierr >>> DM,INTENT(IN) :: DataMngr >>> Vec,INTENT(INOUT) :: AppVec ! it outs as PetscVec >>> >>> AO :: AppOrd >>> PetscInt :: RangeLow,RangeHigh,i >>> IS :: PetscIS,AppIS >>> VecScatter :: Scatter >>> Vec :: PetscVec >>> >>> ! It obtains a temporal vector to store in PETSc ordering >>> CALL DMCreateGlobalVector(DataMngr,PetscVec,ierr) >>> CALL AOCreate(PETSC_COMM_WORLD,AppOrd,ierr) >>> >>> >> Here you create a new AO object >> >> >>> CALL DMDAGetAO(DataMngr,AppOrd,ierr) >>> >>> >> Here you overwrite that initial AO with the AO from the DMDA, thus >> leaking memory. >> >> >>> CALL VecGetOwnershipRange(PetscVec,RangeLow,RangeHigh,ierr) >>> CALL >>> ISCreateGeneral(PETSC_COMM_WORLD,RangeHigh-RangeLow,(/(i,i=RangeLow,RangeHigh)/),PETSC_COPY_VALUES,PetscIS,ierr) >>> CALL ISDuplicate(PetscIS,AppIS,ierr) >>> CALL ISCopy(PetscIS,AppIS,ierr) >>> CALL AOPetscToApplicationIS(AppOrd,AppIS,ierr) >>> CALL VecScatterCreate(AppVec,AppIS,PetscVec,PetscIS,Scatter,ierr) >>> CALL >>> VecScatterBegin(Scatter,AppVec,PetscVec,INSERT_VALUES,SCATTER_FORWARD,ierr) >>> CALL >>> VecScatterEnd(Scatter,AppVec,PetscVec,INSERT_VALUES,SCATTER_FORWARD,ierr) >>> >>> CALL VecScatterDestroy(Scatter,ierr) >>> CALL ISDestroy(AppIS,ierr) >>> CALL ISDestroy(PetscIS,ierr) >>> CALL AODestroy(AppOrd,ierr) >>> >>> >> Here you destroy the DMDA AO, which causes the error, but not the >> original AO, which causes a leak. >> >> Remove the Create/Destroy. >> >> > It worked pretty well, thank you. > But what do you mean with "original AO"? is it not supposed one have to > destroy every petsc object created? > > Forget it, I already understand. > Santiago O. > > Matt >> >> >>> CALL VecCopy(PetscVec,AppVec,ierr) >>> CALL VecDestroy(PetscVec,ierr) >>> >>> END SUBROUTINE VecApplicationToPetsc >>> >>> >>> It is working well for my purpose, but just the first time I call it; >>> the second time I call it, the AO object give me back an error. The most >>> obviously way to avoid it is creating AO, IS and VecScatter objects just >>> one time, but I don't want to handle those variables through my whole >>> program. >>> >>> Am I doing something wrong with the AO object? >>> >>> Thank you. >>> >>> >>> -- >>> >>> -- >>> Att: >>> >>> Santiago Ospina De Los R?os >>> National University of Colombia >>> >> >> >> >> -- >> What most experimenters take for granted before they begin their >> experiments is infinitely more interesting than any results to which their >> experiments lead. >> -- Norbert Wiener >> > > > > -- > > -- > Att: > > Santiago Ospina De Los R?os > National University of Colombia > -- -- Att: Santiago Ospina De Los R?os National University of Colombia -------------- next part -------------- An HTML attachment was scrubbed... URL: From aking33 at exseed.ed.ac.uk Mon Jun 13 11:59:13 2016 From: aking33 at exseed.ed.ac.uk (noreply) Date: Mon, 13 Jun 2016 17:59:13 +0100 Subject: [petsc-users] Messages on hold for petsc-users@mcs.anl.gov Message-ID: <201606131659.u5DGXbVA001632@nougat.ucs.ed.ac.uk> Messages on hold Read here. -------------- next part -------------- An HTML attachment was scrubbed... URL: -------------- next part -------------- An embedded and charset-unspecified text was scrubbed... Name: not available URL: From jychang48 at gmail.com Mon Jun 13 17:25:17 2016 From: jychang48 at gmail.com (Justin Chang) Date: Mon, 13 Jun 2016 17:25:17 -0500 Subject: [petsc-users] Does PETSc have these solvers bounded-constrained optimization problems? In-Reply-To: <7896C522-DA2F-4044-87BA-1E9F1DBA245C@mcs.anl.gov> References: <7896C522-DA2F-4044-87BA-1E9F1DBA245C@mcs.anl.gov> Message-ID: Thanks Barry, 1) Say this is my problem: min 1/2 x^T*H*x - x^T*f s.t. x_lower < x < x_upper If i want to use any of the following TAO complementarity solvers: - ASILS - ASFLS - SSILS - SSFLS I would need these routines: TaoSetConstraintsRoutine(tao,c,formGradient(...),NULL) TaoSetJacobianRoutine(tao,J,J,formHessian(...),NULL) TaoSetVariableBounds(tao,x_lower,x_upper) where formGradient() would return c = H*x - f and formHessian would return J = H Is this correct? 2) If so, then what exactly is the difference between these TAO complementarity solvers and the SNESVINEWTONSSLS solver? From the online manuals and documentation, both claim to be variational inequality solvers. Thanks! Justin On Sat, Jun 11, 2016 at 12:19 PM, Barry Smith wrote: > > Justin, > > For bound constrained optimization problems, there is: > > TRON -- a truncated Newton method from your favorite inventor of such > methods > BLMVM -- a limited memory quasi-Newton method for bound constraints > (projected quasi-Newton) > > There used to be the KT solvers that was just a wrapper around the > complementarity > methods. Jason -- what happened to this? > > Anyways, from the gradient and Hessian (or Hessian vector product), you > can apply the > complementarity solvers to the optimality conditions: > > ASLS -- active set family (e.g. projected newton) > SSLS -- semismooth family > > For more general constraints, there is: > > IPM -- interior-point method > > I have not used it or tested it though. > > For PDE constrained problems, there is: > > LCL -- linearly constrained augmented Lagrangian. > > > ROL has imitations either directly copied from our code or written from > our papers. > > > On Jun 10, 2016, at 5:57 PM, Justin Chang wrote: > > > > Hi all, > > > > Does PETSc currently have any of these solvers for bounded constraint > problems: > > > > 1) Semismooth Newton methods (aka primal-dual active-set methods) > > 2) Projected Newton methods > > > > Trilinos' Rapid Optimization Library (ROL) has them, and I have seen > papers and books claiming that these solvers are state-of-the-art. > > > > I see there's SNESVINEWTONSSLS and TAOGPCG but are these the same as the > above methods? > > > > Thanks, > > Justin > > > > > > > > -------------- next part -------------- An HTML attachment was scrubbed... URL: From bsmith at mcs.anl.gov Mon Jun 13 17:37:06 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Mon, 13 Jun 2016 17:37:06 -0500 Subject: [petsc-users] Does PETSc have these solvers bounded-constrained optimization problems? In-Reply-To: References: <7896C522-DA2F-4044-87BA-1E9F1DBA245C@mcs.anl.gov> Message-ID: > On Jun 13, 2016, at 5:25 PM, Justin Chang wrote: > > Thanks Barry, > > 1) Say this is my problem: > > min 1/2 x^T*H*x - x^T*f > s.t. x_lower < x < x_upper > > If i want to use any of the following TAO complementarity solvers: > > - ASILS > - ASFLS > - SSILS > - SSFLS > > I would need these routines: > > TaoSetConstraintsRoutine(tao,c,formGradient(...),NULL) I think this should be TaoSetGradientRoutine() > TaoSetJacobianRoutine(tao,J,J,formHessian(...),NULL) > TaoSetVariableBounds(tao,x_lower,x_upper) > > where formGradient() would return c = H*x - f > and formHessian would return J = H > > Is this correct? Seems reasonable. > > 2) If so, then what exactly is the difference between these TAO complementarity solvers and the SNESVINEWTONSSLS solver? From the online manuals and documentation, both claim to be variational inequality solvers. In Tao it is solving it as an optimization problem while SNESVINEWTONSSLS solves it as a "nonlinear equation" with constraints; I think the answer should be the same. Barry > > Thanks! > Justin > > > On Sat, Jun 11, 2016 at 12:19 PM, Barry Smith wrote: > > Justin, > > For bound constrained optimization problems, there is: > > TRON -- a truncated Newton method from your favorite inventor of such methods > BLMVM -- a limited memory quasi-Newton method for bound constraints (projected quasi-Newton) > > There used to be the KT solvers that was just a wrapper around the complementarity > methods. Jason -- what happened to this? > > Anyways, from the gradient and Hessian (or Hessian vector product), you can apply the > complementarity solvers to the optimality conditions: > > ASLS -- active set family (e.g. projected newton) > SSLS -- semismooth family > > For more general constraints, there is: > > IPM -- interior-point method > > I have not used it or tested it though. > > For PDE constrained problems, there is: > > LCL -- linearly constrained augmented Lagrangian. > > > ROL has imitations either directly copied from our code or written from our papers. > > > On Jun 10, 2016, at 5:57 PM, Justin Chang wrote: > > > > Hi all, > > > > Does PETSc currently have any of these solvers for bounded constraint problems: > > > > 1) Semismooth Newton methods (aka primal-dual active-set methods) > > 2) Projected Newton methods > > > > Trilinos' Rapid Optimization Library (ROL) has them, and I have seen papers and books claiming that these solvers are state-of-the-art. > > > > I see there's SNESVINEWTONSSLS and TAOGPCG but are these the same as the above methods? > > > > Thanks, > > Justin > > > > > > > > From jed at jedbrown.org Tue Jun 14 06:29:03 2016 From: jed at jedbrown.org (Jed Brown) Date: Tue, 14 Jun 2016 05:29:03 -0600 Subject: [petsc-users] Does PETSc have these solvers bounded-constrained optimization problems? In-Reply-To: References: <7896C522-DA2F-4044-87BA-1E9F1DBA245C@mcs.anl.gov> Message-ID: <871t40rou8.fsf@jedbrown.org> Barry Smith writes: > In Tao it is solving it as an optimization problem while > SNESVINEWTONSSLS solves it as a "nonlinear equation" with > constraints; I think the answer should be the same. The latter may have more solutions. -------------- next part -------------- A non-text attachment was scrubbed... Name: signature.asc Type: application/pgp-signature Size: 818 bytes Desc: not available URL: From elbueler at alaska.edu Tue Jun 14 19:31:54 2016 From: elbueler at alaska.edu (Ed Bueler) Date: Tue, 14 Jun 2016 16:31:54 -0800 Subject: [petsc-users] petsc-users Digest, Vol 90, Issue 34 In-Reply-To: References: Message-ID: Justin -- 2) If so, then what exactly is the difference between these TAO > complementarity solvers and the SNESVINEWTONSSLS solver? From the online > manuals and documentation, both claim to be variational inequality solvers. > There are problems like lubrication flows, including shallow ice sheets on non-trivial bedrock topography, which are "inequality-constrained PDEs". Some of these problems are known to have well-posed (or sometimes likely-to-be well-posed) variational inequality formulations. Equivalently they can be posed as nonlinear complementarity problems (i.e. in finite dimensions one can show equivalence between variational inequalities and nonlinear complementarity problems). However, because one can also show that the Jacobian is not symmetric in some of the above cases, e.g. ice sheets, it follows that these are *not* optimization problems. That is, because the Jacobian is not symmetric, it cannot be the Hessian of some (possibly-unknown) smooth objective function. For these problems one can use PETSc's SNESVINEWTON{R,S}SSLS. I.e. it works when I have tried it. It is not clear to me if TAO is set up to not have an objective function at all. (That is a question for the TAO developers?) In the SNESVINEWTONXSLS solvers an L^2 merit function (i.e. square of the residual) replaces the not-even-present objective function when doing line search, just as happens in solving nonlinear equations. Ed -- Ed Bueler Dept of Math and Stat and Geophysical Institute University of Alaska Fairbanks Fairbanks, AK 99775-6660 301C Chapman and 410D Elvey 907 474-7693 and 907 474-7199 (fax 907 474-5394) -------------- next part -------------- An HTML attachment was scrubbed... URL: From epscodes at gmail.com Wed Jun 15 10:31:10 2016 From: epscodes at gmail.com (Xiangdong) Date: Wed, 15 Jun 2016 11:31:10 -0400 Subject: [petsc-users] linesearch problem in snes composite Message-ID: Hello everyone, I am using the snes composite with the following options: -snes_type composite -snes_composite_type multiplicative -snes_composite_sneses newtonls -snes_linesearch_type bt -sub_0_snes_linesearch_type basic -snes_linesearch_monitor -sub_0_snes_linesearch_monitor I only use single newtonls in the composite for helping me understand how the composite works. By specifying the -snes_linesearch_type bt, I am expecting the norm decrease in each iterations. Moreover, -snes_linesearch_monitor should print the information on the step size. However, when I ran the codes, I found that no information on the step size of linesearch is output and the residual norm sometimes is NOT decreasing given the bt option provided. It seems that the snes_linesearch_bt is not working in this setting or I messed up the options somewhere. The linesearch works in the sub_0 level if I specify the -sub_0_snes_linesearch_type bt. I do not understand why it does not work in the overall level. Here is the snes norm information as well as the output of snes_view. Is there a way to get the linesearch working on the overall level? 0 SNES Function norm 1.436371027798e+04 0 SNES Function norm 1.436371027798e+04 1 SNES Function norm 1.562640838177e+04 1 SNES Function norm 1.562640838177e+04 0 SNES Function norm 1.562640838177e+04 1 SNES Function norm 5.101254678006e+03 2 SNES Function norm 5.101254678006e+03 0 SNES Function norm 5.101254678006e+03 1 SNES Function norm 1.287999851800e+03 3 SNES Function norm 1.287999851800e+03 0 SNES Function norm 1.287999851800e+03 1 SNES Function norm 3.781864044552e+02 4 SNES Function norm 3.781864044552e+02 0 SNES Function norm 3.781864044552e+02 1 SNES Function norm 9.895411709407e+01 5 SNES Function norm 9.895411709407e+01 0 SNES Function norm 9.895411709407e+01 1 SNES Function norm 6.379856588223e+00 6 SNES Function norm 6.379856588223e+00 Nonlinear solve converged due to CONVERGED_FNORM_RELATIVE iterations 6 SNES Object: 256 MPI processes type: composite Composite SNES type - MULTIPLICATIVE SNESes on composite preconditioner follow --------------------------------- SNES Object: (sub_0_) 256 MPI processes type: newtonls maximum iterations=1, maximum function evaluations=10000 tolerances: relative=1e-08, absolute=1e-50, solution=1e-08 total number of linear solver iterations=188 total number of function evaluations=1 SNESLineSearch Object: (sub_0_) 256 MPI processes type: basic maxstep=1.000000e+08, minlambda=1.000000e-12 tolerances: relative=1.000000e-08, absolute=1.000000e-15, lambda=1.000000e-08 maximum iterations=40 KSP Object: (sub_0_) 256 MPI processes type: bcgsl BCGSL: Ell = 2 BCGSL: Delta = 0 maximum iterations=5000, initial guess is zero tolerances: relative=0.001, absolute=1e-50, divergence=10000 left preconditioning using PRECONDITIONED norm type for convergence test PC Object: (sub_0_) 256 MPI processes type: sor SOR: type = local_symmetric, iterations = 1, local iterations = 1, omega = 1 linear system matrix = precond matrix: Mat Object: jac 256 MPI processes type: mpiaij rows=2244000, cols=2244000, bs=2 total: nonzeros=3.112e+07, allocated nonzeros=3.112e+07 total number of mallocs used during MatSetValues calls =0 --------------------------------- maximum iterations=10, maximum function evaluations=10000 tolerances: relative=0.001, absolute=1e-50, solution=1e-08 total number of linear solver iterations=0 total number of function evaluations=1 SNESLineSearch Object: 256 MPI processes type: bt interpolation: cubic alpha=1.000000e-04 maxstep=1.000000e+08, minlambda=1.000000e-12 tolerances: relative=1.000000e-08, absolute=1.000000e-15, lambda=1.000000e-08 maximum iterations=40 KSP Object: 256 MPI processes type: gmres GMRES: restart=30, using Classical (unmodified) Gram-Schmidt Orthogonalization with no iterative refinement GMRES: happy breakdown tolerance 1e-30 maximum iterations=10000, initial guess is zero tolerances: relative=1e-05, absolute=1e-50, divergence=10000 left preconditioning using DEFAULT norm type for convergence test PC Object: 256 MPI processes type: lu PC has not been set up so information may be incomplete LU: out-of-place factorization tolerance for zero pivot 2.22045e-14 matrix ordering: natural Thank you. Best, Xiangdong -------------- next part -------------- An HTML attachment was scrubbed... URL: From knepley at gmail.com Wed Jun 15 16:53:32 2016 From: knepley at gmail.com (Matthew Knepley) Date: Wed, 15 Jun 2016 16:53:32 -0500 Subject: [petsc-users] linesearch problem in snes composite In-Reply-To: References: Message-ID: On Wed, Jun 15, 2016 at 10:31 AM, Xiangdong wrote: > Hello everyone, > > I am using the snes composite with the following options: > -snes_type composite > -snes_composite_type multiplicative > -snes_composite_sneses newtonls > -snes_linesearch_type bt > -sub_0_snes_linesearch_type basic > -snes_linesearch_monitor > -sub_0_snes_linesearch_monitor > > I only use single newtonls in the composite for helping me understand how > the composite works. By specifying the -snes_linesearch_type bt, I am > expecting the norm decrease in each iterations. Moreover, > -snes_linesearch_monitor should print the information on the step size. > However, when I ran the codes, I found that no information on the step size > of linesearch is output and the residual norm sometimes is NOT decreasing > given the bt option provided. It seems that the snes_linesearch_bt is not > working in this setting or I messed up the options somewhere. > > The linesearch works in the sub_0 level if I specify > the -sub_0_snes_linesearch_type bt. I do not understand why it does not > work in the overall level. > SNESComposite does not use a line search. I have not seen any theory to suggest that this is a good idea. You could get the effect of a line search with SNESComposite by left preconditioning NRICH with it. Thanks, Matt > Here is the snes norm information as well as the output of snes_view. Is > there a way to get the linesearch working on the overall level? > > > 0 SNES Function norm 1.436371027798e+04 > 0 SNES Function norm 1.436371027798e+04 > 1 SNES Function norm 1.562640838177e+04 > 1 SNES Function norm 1.562640838177e+04 > 0 SNES Function norm 1.562640838177e+04 > 1 SNES Function norm 5.101254678006e+03 > 2 SNES Function norm 5.101254678006e+03 > 0 SNES Function norm 5.101254678006e+03 > 1 SNES Function norm 1.287999851800e+03 > 3 SNES Function norm 1.287999851800e+03 > 0 SNES Function norm 1.287999851800e+03 > 1 SNES Function norm 3.781864044552e+02 > 4 SNES Function norm 3.781864044552e+02 > 0 SNES Function norm 3.781864044552e+02 > 1 SNES Function norm 9.895411709407e+01 > 5 SNES Function norm 9.895411709407e+01 > 0 SNES Function norm 9.895411709407e+01 > 1 SNES Function norm 6.379856588223e+00 > 6 SNES Function norm 6.379856588223e+00 > Nonlinear solve converged due to CONVERGED_FNORM_RELATIVE iterations 6 > SNES Object: 256 MPI processes > type: composite > Composite SNES type - MULTIPLICATIVE > SNESes on composite preconditioner follow > --------------------------------- > SNES Object: (sub_0_) 256 MPI processes > type: newtonls > maximum iterations=1, maximum function evaluations=10000 > tolerances: relative=1e-08, absolute=1e-50, solution=1e-08 > total number of linear solver iterations=188 > total number of function evaluations=1 > SNESLineSearch Object: (sub_0_) 256 MPI processes > type: basic > maxstep=1.000000e+08, minlambda=1.000000e-12 > tolerances: relative=1.000000e-08, absolute=1.000000e-15, > lambda=1.000000e-08 > maximum iterations=40 > KSP Object: (sub_0_) 256 MPI processes > type: bcgsl > BCGSL: Ell = 2 > BCGSL: Delta = 0 > maximum iterations=5000, initial guess is zero > tolerances: relative=0.001, absolute=1e-50, divergence=10000 > left preconditioning > using PRECONDITIONED norm type for convergence test > PC Object: (sub_0_) 256 MPI processes > type: sor > SOR: type = local_symmetric, iterations = 1, local iterations = > 1, omega = 1 > linear system matrix = precond matrix: > Mat Object: jac 256 MPI processes > type: mpiaij > rows=2244000, cols=2244000, bs=2 > total: nonzeros=3.112e+07, allocated nonzeros=3.112e+07 > total number of mallocs used during MatSetValues calls =0 > --------------------------------- > maximum iterations=10, maximum function evaluations=10000 > tolerances: relative=0.001, absolute=1e-50, solution=1e-08 > total number of linear solver iterations=0 > total number of function evaluations=1 > SNESLineSearch Object: 256 MPI processes > type: bt > interpolation: cubic > alpha=1.000000e-04 > maxstep=1.000000e+08, minlambda=1.000000e-12 > tolerances: relative=1.000000e-08, absolute=1.000000e-15, > lambda=1.000000e-08 > maximum iterations=40 > KSP Object: 256 MPI processes > type: gmres > GMRES: restart=30, using Classical (unmodified) Gram-Schmidt > Orthogonalization with no iterative refinement > GMRES: happy breakdown tolerance 1e-30 > maximum iterations=10000, initial guess is zero > tolerances: relative=1e-05, absolute=1e-50, divergence=10000 > left preconditioning > using DEFAULT norm type for convergence test > PC Object: 256 MPI processes > type: lu > PC has not been set up so information may be incomplete > LU: out-of-place factorization > tolerance for zero pivot 2.22045e-14 > matrix ordering: natural > > Thank you. > > Best, > Xiangdong > > > > > > -- What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead. -- Norbert Wiener -------------- next part -------------- An HTML attachment was scrubbed... URL: From mfadams at lbl.gov Wed Jun 15 18:13:30 2016 From: mfadams at lbl.gov (Mark Adams) Date: Wed, 15 Jun 2016 19:13:30 -0400 Subject: [petsc-users] KSPSolve errors on blues In-Reply-To: References: <08D69A43-29A0-4037-9780-6DD95C59249B@mcs.anl.gov> <1E415A49-A9EC-4685-BE48-C3A576F92FFF@mcs.anl.gov> <34F94392-EED7-42AD-A558-B3CE73D7D1FD@mcs.anl.gov> Message-ID: And to diagnose GAMG you want to run with -info and grep on GAMG, and send that to us. On Fri, Jun 10, 2016 at 4:45 PM, Xujun Zhao wrote: > > > On Fri, Jun 10, 2016 at 2:53 PM, Barry Smith wrote: > >> >> > On Jun 10, 2016, at 2:04 PM, Xujun Zhao wrote: >> > >> > Using gamg makes the convergence super slow (I don't know why) >> > >> > --->test in StokesSolver::solve(): Start the KSP solve... >> > 0 KSP Residual norm 5.077511671295e+01 >> > 1 KSP Residual norm 2.902020348172e+01 >> > 2 KSP Residual norm 2.034415002085e+01 >> > 3 KSP Residual norm 1.525150176412e+01 >> > 4 KSP Residual norm 1.332688121023e+01 >> > 5 KSP Residual norm 1.178298922349e+01 >> > .................................. >> > 28 KSP Residual norm 1.300489085085e+00 >> > 29 KSP Residual norm 1.200176938138e+00 >> > 30 KSP Residual norm 1.087425787854e+00 >> > >> > >> > >> > In addition, I found the process memory is less than PetscMalloc(). >> Should the process memory usage be the PETScMalloc + others? >> >> Yes, normally process would be more than what was PetscMalloced. The >> case when PetscMalloc is smaller would be when some of the space that was >> PetscMalloced but was never used (say for example I allocate an array with >> 10 million entries but only access the first 100 entries; memory pages are >> created on-demand in unix so no pages would be allocated for most of the >> array hence the process memory would be less than the PetscMalloced memory.) >> >> So what conclusions did you reach from this >> >> 1) hypre is using a lot of memory more than GAMG? (only look at process >> memory) Is this confirmed? >> > In this example, yes. > > >> >> 2) gamg is converging very poorly compared to hypre? This is not good, >> can you run with -fieldsplit_0_ksp_view_mat and send the resulting binary >> file to petsc-maint at mcs.anl.gov so we can see if we can figure out why >> hypre is doing much better than gamg on the matrix. >> > Again yes, only for this specific example and pc setup, especially when > fine mesh is used. Will do. > >> >> 3) somewhere in gamg it is allocating much larger memory regions then is >> needed. This is actually not surprising since with sparse matrix algorithms >> such as R A R^T one doesn't know in advance the memory needed and has to >> make upper bound estimates. >> >> Barry >> >> >> >> >> >> >> > So the former should be more than the later. >> > >> > Summary of Memory Usage in PETSc >> > Maximum (over computational time) process memory: total >> 1.4316e+10 max 3.7933e+09 min 3.4463e+09 >> > Current process memory: total >> 1.4316e+10 max 3.7933e+09 min 3.4463e+09 >> > Maximum (over computational time) space PetscMalloc()ed: total >> 6.5987e+10 max 1.7018e+10 min 1.5901e+10 >> > Current space PetscMalloc()ed: total >> 3.0957e+05 max 7.7392e+04 min 7.7392e+04 >> > >> > On Fri, Jun 10, 2016 at 12:07 PM, Barry Smith >> wrote: >> > >> > > On Jun 10, 2016, at 11:43 AM, Xujun Zhao wrote: >> > > >> > > I found that this was caused by using -fieldsplit_0_pc_type hypre, >> which ate a lot of memory during the KSPSolve(). >> > > Does hypre use BoomerAMG as the default pc type? >> > >> > Yes >> > >> > > I am curious why it uses such a huge memory. PETSs allocated mem is >> about 22G, but the total process memory is up to 100G. So it looks like the >> additional 70+G is associated with hypre, which is more than 3 times of >> Petsc matrices and vectors! >> > >> > You can try -fieldsplit_0_pc_type gamg and see how that goes >> memory-wise. The memory used by GAMG will be listed as PETSc allocated >> memory. >> > >> > Barry >> > >> > > >> > > -Xujun >> > > >> > > On Wed, Jun 8, 2016 at 4:29 PM, Xujun Zhao wrote: >> > > OK, this makes sense. >> > > Now my libMesh code use SerialMesh, which keeps a copy on each >> processor, although the operation is parallelized. So it requires more >> memory if multiple CPUs are used. This may be a potential culprit. But I >> suppose the 60x60x60 mesh data(all second order) shouldn't be so large.... >> there may be some other bugs >> > > >> > > On Wed, Jun 8, 2016 at 4:18 PM, Barry Smith >> wrote: >> > > >> > > > On Jun 8, 2016, at 4:08 PM, Xujun Zhao wrote: >> > > > >> > > > Barry, >> > > > >> > > > Thank you. I am testing on the blues. >> > > > btw, what do they mean for the different types of memory usage? for >> example, below is the summary of mem usage for 60x60x60(with 2.9M dofs). >> The max process memory is 3 times as the max space PetscMalloc()ed. >> > > >> > > PetscMalloced is basically the PETSc data structures; Process >> memory is size of the program plus PETSc malloced space plus space >> allocated by any other library, in this case libMesh. It looks like libMesh >> is requiring a lot of space? >> > > >> > > Barry >> > > >> > > > >> > > > Summary of Memory Usage in PETSc >> > > > Maximum (over computational time) process memory: total >> 1.0930e+11 max 5.6928e+10 min 5.2376e+10 >> > > > Current process memory: >> total 3.1762e+09 max 2.8804e+09 min 2.9583e+08 >> > > > Maximum (over computational time) space PetscMalloc()ed: total >> 3.0071e+10 max 1.5286e+10 min 1.4785e+10 >> > > > Current space PetscMalloc()ed: >> total 1.5453e+05 max 7.7264e+04 min 7.7264e+04 >> > > > >> > > > >> > > > >> > > > On Wed, Jun 8, 2016 at 1:40 PM, Barry Smith >> wrote: >> > > > >> > > > > On Jun 8, 2016, at 1:30 PM, Xujun Zhao wrote: >> > > > > >> > > > > A quick test of a smaller system on my laptop with 25x25x25 mesh >> gives the following info. >> > > > > The memory used keeps increasing from 1 to 3 CPUs, but slightly >> decreases with 4 CPUs. >> > > > >> > > > yes this does not look problematic >> > > > >> > > > > On the other hand, 60x60x60 mesh (2.9M dofs) is also not a big >> system... >> > > > >> > > > True. >> > > > >> > > > I think you need to run the 60 60 60 system also on 1 2 4 and 8 >> processes to see how the memory trends. I don't think we should eliminate >> memory as the culprit yet. >> > > > >> > > > >> > > > Barry >> > > > >> > > > > >> > > > > >> > > > > ------------------------------------------------- 1 CPU >> ------------------------------------------------- >> > > > > Summary of Memory Usage in PETSc >> > > > > Maximum (over computational time) process memory: total >> 4.7054e+09 max 4.7054e+09 min 4.7054e+09 >> > > > > Current process memory: >> total 4.7054e+09 max 4.7054e+09 min 4.7054e+09 >> > > > > Maximum (over computational time) space PetscMalloc()ed: total >> 1.6151e+09 max 1.6151e+09 min 1.6151e+09 >> > > > > Current space PetscMalloc()ed: >> total 7.7232e+04 max 7.7232e+04 min 7.7232e+04 >> > > > > >> > > > > ------------------------------------------------- 2 CPU >> ------------------------------------------------- >> > > > > Summary of Memory Usage in PETSc >> > > > > Maximum (over computational time) process memory: total >> 6.2389e+09 max 3.1275e+09 min 3.1113e+09 >> > > > > Current process memory: >> total 6.2389e+09 max 3.1275e+09 min 3.1113e+09 >> > > > > Maximum (over computational time) space PetscMalloc()ed: total >> 2.1589e+09 max 1.1193e+09 min 1.0397e+09 >> > > > > Current space PetscMalloc()ed: >> total 1.5446e+05 max 7.7232e+04 min 7.7232e+04 >> > > > > >> > > > > ------------------------------------------------- 3 CPU >> ------------------------------------------------- >> > > > > Summary of Memory Usage in PETSc >> > > > > Maximum (over computational time) process memory: total >> 7.7116e+09 max 1.9572e+09 min 1.8715e+09 >> > > > > Current process memory: >> total 7.7116e+09 max 1.9572e+09 min 1.8715e+09 >> > > > > Maximum (over computational time) space PetscMalloc()ed: total >> 2.1754e+09 max 5.8450e+08 min 5.0516e+08 >> > > > > Current space PetscMalloc()ed: >> total 3.0893e+05 max 7.7232e+04 min 7.7232e+04 >> > > > > >> > > > > ------------------------------------------------- 4 CPU >> ------------------------------------------------- >> > > > > Summary of Memory Usage in PETSc >> > > > > Maximum (over computational time) process memory: total >> 7.1188e+09 max 2.4651e+09 min 2.2909e+09 >> > > > > Current process memory: >> total 7.1188e+09 max 2.4651e+09 min 2.2909e+09 >> > > > > Maximum (over computational time) space PetscMalloc()ed: total >> 2.1750e+09 max 7.6982e+08 min 6.5289e+08 >> > > > > Current space PetscMalloc()ed: >> total 2.3170e+05 max 7.7232e+04 min 7.7232e+04 >> > > > > >> > > > > >> > > > > On Wed, Jun 8, 2016 at 11:51 AM, Barry Smith >> wrote: >> > > > > >> > > > > Signal 9 SIGKILL on batch systems usually means the process >> was killed because it ran out of time or ran out of memory. >> > > > > >> > > > > Perhaps there is something in the code that is unscalable and >> requires more more memory with more processes. You can run on 1 2 and 3 >> processes and measure the memory usage to see if it goes up with the number >> of processes using for example -memory_view >> > > > > >> > > > > Barry >> > > > > >> > > > > >> > > > > >> > > > > > On Jun 8, 2016, at 11:41 AM, Xujun Zhao >> wrote: >> > > > > > >> > > > > > Hi all, >> > > > > > >> > > > > > I am running a FE Stokes Solver with schur complement type PC >> on blues. The program runs well when mesh is 40X40X40 (0.88M dofs), but >> when I use 60X60X60 mesh, the program crashes and gives out some errors, >> which looks like a segmentation fault. The "strange" thing is that it runs >> well with 1CPU, 2CPUs, but fails on 4 or 8 CPUs. The log files are also >> attached. It seems like the global matrix and vector are assembled well, >> and errors come out before calling the KSPSolve(). >> > > > > > >> > > > > > btw, I use the recent PETSc 3.7 dbg version. for libMesh I use >> both dbg and opt version, but none of those can give useful information. >> Has anyone met such situations before? Many thinks. >> > > > > > >> > > > > >> > > > > >> > > > >> > > > >> > > >> > > >> > > >> > >> > >> >> > -------------- next part -------------- An HTML attachment was scrubbed... URL: From jychang48 at gmail.com Wed Jun 15 19:03:50 2016 From: jychang48 at gmail.com (Justin Chang) Date: Wed, 15 Jun 2016 19:03:50 -0500 Subject: [petsc-users] Does PETSc have these solvers bounded-constrained optimization problems? In-Reply-To: <871t40rou8.fsf@jedbrown.org> References: <7896C522-DA2F-4044-87BA-1E9F1DBA245C@mcs.anl.gov> <871t40rou8.fsf@jedbrown.org> Message-ID: Attached is my petsc4py/firedrake code which has the implementation I described. As of right now, my current implementation with ASILS/ASFLS solvers work (although they are much slower compared to TRON) but the SSILS/SSFLS solvers don't even converge. For example, if I run the code as: > python NR_Nonlinear_poisson.py 50 50 2 -opt_tao_type asils -opt_tao_monitor -opt_tao_max_it 10 -opt_tao_view iter = 0, Function value: 10.268, Residual: 30.1512 iter = 1, Function value: 2.26616, Residual: 3.28276 iter = 2, Function value: 0.442395, Residual: 0.409106 iter = 3, Function value: 0.0180227, Residual: 0.0305439 iter = 4, Function value: 0.00381325, Residual: 0.0134287 iter = 5, Function value: 0.00191598, Residual: 0.00599256 iter = 6, Function value: 0.00114725, Residual: 0.00383069 iter = 7, Function value: 0.000888807, Residual: 0.0032619 iter = 8, Function value: 0.000434005, Residual: 0.00148022 iter = 9, Function value: 0.000179781, Residual: 0.000565633 iter = 10, Function value: 7.54948e-05, Residual: 0.000242123 iter = 11, Function value: 3.14898e-05, Residual: 0.000112043 Tao Object:(opt_) 1 MPI processes type: asils TaoLineSearch Object: (opt_) 1 MPI processes type: armijo KSP Object: (opt_) 1 MPI processes type: gmres total KSP iterations: 511 Active Set subset type: subvec convergence tolerances: gatol=1e-16, steptol=0., gttol=0. Residual in Function/Gradient:=0.000112043 convergence tolerances: function minimum=1e-08 Objective value=3.14898e-05 total number of iterations=11, (max: 10) total number of constraint function evaluations=23 total number of Jacobian evaluations=12 Solver terminated: -2 Maximum Iterations The above indicates that the solver converges. However if I run the same code but with this: > python NR_Nonlinear_poisson.py 50 50 2 -opt_tao_type ssils -opt_tao_monitor -opt_tao_max_it 10 -opt_tao_view iter = 0, Function value: 10.268, Residual: 30.1512 iter = 1, Function value: 10.268, Residual: 30.1512 iter = 2, Function value: 10.268, Residual: 30.1512 iter = 3, Function value: 10.268, Residual: 30.1512 iter = 4, Function value: 10.268, Residual: 30.1512 iter = 5, Function value: 10.268, Residual: 30.1512 iter = 6, Function value: 10.268, Residual: 30.1512 iter = 7, Function value: 10.268, Residual: 30.1512 iter = 8, Function value: 10.268, Residual: 30.1512 iter = 9, Function value: 10.268, Residual: 30.1512 iter = 10, Function value: 10.268, Residual: 30.1512 iter = 11, Function value: 10.268, Residual: 30.1512 Tao Object:(opt_) 1 MPI processes type: ssils TaoLineSearch Object: (opt_) 1 MPI processes type: armijo KSP Object: (opt_) 1 MPI processes type: gmres total KSP iterations: 451 Active Set subset type: subvec convergence tolerances: gatol=1e-16, steptol=0., gttol=0. Residual in Function/Gradient:=30.1512 convergence tolerances: function minimum=1e-08 Objective value=10.268 total number of iterations=11, (max: 10) total number of constraint function evaluations=331 total number of Jacobian evaluations=1 Solver terminated: -2 Maximum Iterations Clearly something is wrong. Any insight as to why? Thanks, Justin On Tue, Jun 14, 2016 at 6:29 AM, Jed Brown wrote: > Barry Smith writes: > > In Tao it is solving it as an optimization problem while > > SNESVINEWTONSSLS solves it as a "nonlinear equation" with > > constraints; I think the answer should be the same. > > The latter may have more solutions. > -------------- next part -------------- An HTML attachment was scrubbed... URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: NR_Nonlinear_poisson.py Type: text/x-python Size: 5256 bytes Desc: not available URL: From rl.chen at siat.ac.cn Thu Jun 16 21:20:11 2016 From: rl.chen at siat.ac.cn (Rongliang Chen) Date: Fri, 17 Jun 2016 10:20:11 +0800 Subject: [petsc-users] MatPermute for MPIBAIJ matrix Error Message-ID: <57635E5B.6020404@siat.ac.cn> Dear All, I failed to use the MatPermute to permute a MPIBAIJ matrix. The error message is followed, which was obtained by run the example petsc-3.6.3/src/ksp/ksp/examples/tutorials/ex18.c with options: mpirun -n 3 ./ex18 -m 39 -n 18 -ksp_monitor_short -permute nd -mat_type mpibaij -mat_block_size 1 -ksp_view Can anyone tell me how to permute a MPIBAIJ matrix? Thanks. ==================================================================================== [2]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [2]PETSC ERROR: Nonconforming object sizes [2]PETSC ERROR: Local column sizes 702 do not add up to total number of columns 234 [2]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [2]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015 [2]PETSC ERROR: ./ex18 on a 64bit-debug named rlchen by rlchen Fri Jun 17 10:10:49 2016 [2]PETSC ERROR: Configure options --download-blacs --download-scalapack --download-metis --download-parmetis --download-exodusii --download-netcdf --download-hdf5 --with-mpi-dir=/home/rlchen/soft/Program/mpich2-shared --with-debugging=1 --download-fblaslapack --with-64-bit-indices [2]PETSC ERROR: #1 MatGetSubMatrix_MPIBAIJ_Private() line 2261 in /home/rlchen/soft/petsc-3.6.3/src/mat/impls/baij/mpi/mpibaij.c [2]PETSC ERROR: #2 MatPermute_MPIBAIJ() line 2358 in /home/rlchen/soft/petsc-3.6.3/src/mat/impls/baij/mpi/mpibaij.c [2]PETSC ERROR: #3 MatPermute() line 4759 in /home/rlchen/soft/petsc-3.6.3/src/mat/interface/matrix.c [2]PETSC ERROR: #4 main() line 171 in /home/rlchen/soft/petsc-3.6.3/src/ksp/ksp/examples/tutorials/ex18.c [2]PETSC ERROR: PETSc Option Table entries: [2]PETSC ERROR: -ksp_monitor_short [2]PETSC ERROR: -ksp_view [2]PETSC ERROR: -m 39 [2]PETSC ERROR: -mat_block_size 1 [2]PETSC ERROR: -mat_type mpibaij [2]PETSC ERROR: -n 18 [2]PETSC ERROR: -permute nd [2]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint at mcs.anl.gov---------- application called MPI_Abort(MPI_COMM_WORLD, 60) - process 2 ===================================================================================== = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES = EXIT CODE: 15360 = CLEANING UP REMAINING PROCESSES = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES ===================================================================================== Best regards, Rongliang From gomer at stanford.edu Fri Jun 17 14:47:19 2016 From: gomer at stanford.edu (Paul Urbanczyk) Date: Fri, 17 Jun 2016 12:47:19 -0700 Subject: [petsc-users] Round-off / Machine Zero with MatMult Message-ID: Hello all, I'm using PETSc's "MatMult" function - MatMult(Mat A, Vec x, Vec y) - to do a matrix-vector multiply. The Matrix, A, is anti-symmetric, and the vector, x, is uniform. Thus, the resulting vector, y, should be all zeros. The output I'm seeing typically looks like the following: Vec Object: Vec_0x20b2000_2 1 MPI processes type: mpi Process [0] 0. 0. -2.08167e-17 -2.08167e-17 -2.08167e-17 -2.08167e-17 -2.08167e-17 -2.08167e-17 0. 0. Now, I know that -2.08167e-17 is machine zero, but I'm a bit confused why a few of the entries would be exactly zero while others are "machine zero." I would expect them all to be either exactly zero, or machine zero, but not a mixture. Do you have any idea why this might be? Thanks for your help! -Paul From gomer at stanford.edu Fri Jun 17 14:59:47 2016 From: gomer at stanford.edu (Paul Urbanczyk) Date: Fri, 17 Jun 2016 12:59:47 -0700 Subject: [petsc-users] TSSetExactFinalTime Behavior Without TSAdapt In-Reply-To: <58FDA4EC-19D9-4933-B1A2-3D109C86AF2C@anl.gov> References: <7b409e70-60fa-a1f2-6dd1-052fdcbb8601@stanford.edu> <5cf95ffc-0f25-63b7-7f9a-0b227c529064@stanford.edu> <58FDA4EC-19D9-4933-B1A2-3D109C86AF2C@anl.gov> Message-ID: <4580d566-2455-613f-13d3-21c629ace7f3@stanford.edu> Hello Hong, I went back, removed the following: TSAdapt ts_adapt; TSGetAdapt(ts_solver,&ts_adapt); TSAdaptSetType(ts_adapt,TSADAPTNONE); And then added the following before TSSolve(): TSSetFromOptions(ts_solver); The code runs without problem. So, it appears that the TSAdapt behavior either has to be set manually, or it needs to be set by default from TSSetFromOptions. Apparently, it is not being set correctly in TSCreate? Thanks, Paul On 06/08/2016 08:47 PM, Hong Zhang wrote: > Add TSSetFromOptions(ts_solver) before TSSolve(). Please let us know if it works. > > Hong > >> On Jun 7, 2016, at 12:49 PM, Paul Urbanczyk wrote: >> >> Hello, >> >> See below for my initial code, before adding TSSetExactFinalTime. >> >> That version yielded the following error: >> >> [0]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- >> [0]PETSC ERROR: Object is in wrong state >> [0]PETSC ERROR: You must call TSSetExactFinalTime() or use -ts_exact_final_time before calling TSSolve() >> [0]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. >> [0]PETSC ERROR: Petsc Development GIT revision: v3.7.1-449-g419beca GIT Date: 2016-06-01 15:39:33 -0500 >> [0]PETSC ERROR: ./urbanSCFD on a arch-linux2-c-debug named prometheus by gomer Tue Jun 7 12:42:05 2016 >> [0]PETSC ERROR: Configure options >> [0]PETSC ERROR: #1 TSSolve() line 3946 in /home/gomer/local/petsc/src/ts/interface/ts.c >> >> I then added: >> >> TSSetExactFinalTime(ts_solver,TS_EXACTFINALTIME_STEPOVER); >> >> Running then yielded the following error: >> >> [0]PETSC ERROR: ------------------------------------------------------------------------ >> [0]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, probably memory access out of range >> [0]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger >> [0]PETSC ERROR: or see http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind >> [0]PETSC ERROR: or try http://valgrind.org on GNU/linux and Apple Mac OS X to find memory corruption errors >> [0]PETSC ERROR: likely location of problem given in stack below >> [0]PETSC ERROR: --------------------- Stack Frames ------------------------------------ >> [0]PETSC ERROR: Note: The EXACT line numbers in the stack are not available, >> [0]PETSC ERROR: INSTEAD the line number of the start of the function >> [0]PETSC ERROR: is given. >> [0]PETSC ERROR: [0] TSAdaptChoose line 571 /home/gomer/local/petsc/src/ts/adapt/interface/tsadapt.c >> [0]PETSC ERROR: [0] TSStep_Euler line 20 /home/gomer/local/petsc/src/ts/impls/explicit/euler/euler.c >> [0]PETSC ERROR: [0] TSStep line 3707 /home/gomer/local/petsc/src/ts/interface/ts.c >> [0]PETSC ERROR: [0] TSSolve line 3928 /home/gomer/local/petsc/src/ts/interface/ts.c >> [0]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- >> [0]PETSC ERROR: Signal received >> [0]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. >> [0]PETSC ERROR: Petsc Development GIT revision: v3.7.1-449-g419beca GIT Date: 2016-06-01 15:39:33 -0500 >> [0]PETSC ERROR: ./urbanSCFD on a arch-linux2-c-debug named prometheus by gomer Tue Jun 7 12:44:17 2016 >> [0]PETSC ERROR: Configure options >> [0]PETSC ERROR: #1 User provided function() line 0 in unknown file >> -------------------------------------------------------------------------- >> >> Finally, I added >> >> TSAdapt ts_adapt; >> TSGetAdapt(ts_solver,&ts_adapt); >> TSAdaptSetType(ts_adapt,TSADAPTNONE); >> >> After adding this, the program runs without error. >> >> Hope that helps. >> >> Please let me know if I was doing something wrong before to have caused this. It's not pressing for me, though, as my code now appears to be running ok. >> >> -Paul >> >> ORIGINAL VERSION WITHOUT TSSetExactFinalTime: >> >> void cPETScSolverClass::SolveTSProblem() >> { >> if(mpi_main.getRank() == 0) >> { >> std::cout << "*****STARTING SOLUTION*****" << std::endl; >> } >> >> // Set up the time-stepping solver object >> TSCreate(PETSC_COMM_WORLD,&ts_solver); >> >> // Set the problem type to be nonlinear >> TSSetProblemType(ts_solver,TS_NONLINEAR); >> >> // Point the solution to the solution vector (vector of conserved variables) >> TSSetSolution(ts_solver,solver_main.U_cons); >> >> // Set the time-stepping type >> TSSetType(ts_solver,TSEULER); >> >> // Set the initial time and the time step >> TSSetInitialTimeStep(ts_solver,0.0,0.001); >> >> // Set the total duration (number of steps and total time) >> TSSetDuration(ts_solver,10,0.01); >> >> // Point the solver to the monitor function >> TSMonitorSet(ts_solver,solver_main.TS_Monitor,this,NULL); >> >> // Set the distributed array context for the solver >> TSSetDM(ts_solver,main_da); >> >> // Get the nonlinear solver for the time-stepping solver >> TSGetSNES(ts_solver,&nl_solver); >> >> // Write out the initial condition before the solver is started >> WriteSolutionCSV("initial_condition.csv"); >> >> // Run the solver! >> TSSolve(ts_solver,solver_main.U_cons); >> >> if(mpi_main.getRank() == 0) >> { >> std::cout << "-----COMPLETED SOLUTION-----" << std::endl; >> } >> >> // Write out the solution at the end >> WriteSolutionCSV("output_test.csv"); >> >> // Destroy the time-stepping solver >> TSDestroy(&ts_solver); >> >> } >> >> >> NEW VERSION WITH TSSetExactFinalTime and TSAdaptSetType: >> >> void cPETScSolverClass::SolveTSProblem() >> { >> if(mpi_main.getRank() == 0) >> { >> std::cout << "*****STARTING SOLUTION*****" << std::endl; >> } >> >> // Set up the time-stepping solver object >> TSCreate(PETSC_COMM_WORLD,&ts_solver); >> >> // Set the problem type to be nonlinear >> TSSetProblemType(ts_solver,TS_NONLINEAR); >> >> // Point the solution to the solution vector (vector of conserved variables) >> TSSetSolution(ts_solver,solver_main.U_cons); >> >> // Set the time-stepping type >> TSSetType(ts_solver,TSEULER); >> >> // Set the initial time and the time step >> TSSetInitialTimeStep(ts_solver,0.0,0.001); >> >> // Set the total duration (number of steps and total time) >> TSSetDuration(ts_solver,1,0.001); >> >> // Set TS exact final time behavior >> TSSetExactFinalTime(ts_solver,TS_EXACTFINALTIME_STEPOVER); >> >> // Set TS adaptive time stepping behavior >> TSAdapt ts_adapt; >> TSGetAdapt(ts_solver,&ts_adapt); >> TSAdaptSetType(ts_adapt,TSADAPTNONE); >> >> // Point the solver to the function which evaluates the right hand side >> TSSetRHSFunction(ts_solver,solver_main.RHS,solver_main.FormFunction,this); >> >> // Point the solver to the monitor function >> TSMonitorSet(ts_solver,solver_main.TS_Monitor,this,NULL); >> >> // Set the distributed array context for the solver >> TSSetDM(ts_solver,main_da); >> >> // Get the nonlinear solver for the time-stepping solver >> TSGetSNES(ts_solver,&nl_solver); >> >> // Write out the initial condition before the solver is started >> WriteSolutionCSV("initial_condition.csv"); >> >> // Run the solver! >> TSSolve(ts_solver,solver_main.U_cons); >> >> if(mpi_main.getRank() == 0) >> { >> std::cout << "-----COMPLETED SOLUTION-----" << std::endl; >> } >> >> // Write out the solution at the end >> WriteSolutionCSV("output_test.csv"); >> >> // Destroy the time-stepping solver >> TSDestroy(&ts_solver); >> >> } >> >> >> On 06/05/2016 06:44 PM, Barry Smith wrote: >>> Paul, >>> >>> I don't think this was an expected change. Can you send code or walk us through the steps that led you to this? >>> >>> Barry >>> >>> >>>> On Jun 3, 2016, at 10:23 AM, Paul Urbanczyk wrote: >>>> >>>> Hello, >>>> >>>> I recently upgraded to the latest version of PETSc (3.7.1) from the git repository. >>>> >>>> Running my code gave me an error message about TSSolve being in the wrong state and needing to call TSSetExactFinalTime. >>>> >>>> I added this function call with TS_EXACTFINALTIME_STEPOVER, but when I re-ran my code, I got a seg fault and error messages pointing to TSAdaptChoose. >>>> >>>> After fiddling around for a while, I found that I now needed to explicitly set the time step adaptation through TSAdaptSetType. >>>> >>>> Can anyone confirm that this is so? If so, it might be helpful to note that in documentation or error messages somewhere. >>>> >>>> Thanks, >>>> >>>> Paul >>>> >>>> >> From knepley at gmail.com Fri Jun 17 15:06:51 2016 From: knepley at gmail.com (Matthew Knepley) Date: Fri, 17 Jun 2016 15:06:51 -0500 Subject: [petsc-users] Round-off / Machine Zero with MatMult In-Reply-To: References: Message-ID: On Fri, Jun 17, 2016 at 2:47 PM, Paul Urbanczyk wrote: > Hello all, > > I'm using PETSc's "MatMult" function - MatMult(Mat A, Vec x, Vec y) - to > do a matrix-vector multiply. The Matrix, A, is anti-symmetric, and the > vector, x, is uniform. Thus, the resulting vector, y, should be all zeros. > > The output I'm seeing typically looks like the following: > > Vec Object: Vec_0x20b2000_2 1 MPI processes > type: mpi > Process [0] > 0. > 0. > -2.08167e-17 > -2.08167e-17 > -2.08167e-17 > -2.08167e-17 > -2.08167e-17 > -2.08167e-17 > 0. > 0. > > Now, I know that -2.08167e-17 is machine zero, but I'm a bit confused why > a few of the entries would be exactly zero while others are "machine zero." > I would expect them all to be either exactly zero, or machine zero, but not > a mixture. Do you have any idea why this might be? > The order of addition matter for roundoff errors. Thanks, Matt > Thanks for your help! > > -Paul > -- What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead. -- Norbert Wiener -------------- next part -------------- An HTML attachment was scrubbed... URL: From bsmith at mcs.anl.gov Fri Jun 17 15:32:33 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Fri, 17 Jun 2016 15:32:33 -0500 Subject: [petsc-users] TSSetExactFinalTime Behavior Without TSAdapt In-Reply-To: <4580d566-2455-613f-13d3-21c629ace7f3@stanford.edu> References: <7b409e70-60fa-a1f2-6dd1-052fdcbb8601@stanford.edu> <5cf95ffc-0f25-63b7-7f9a-0b227c529064@stanford.edu> <58FDA4EC-19D9-4933-B1A2-3D109C86AF2C@anl.gov> <4580d566-2455-613f-13d3-21c629ace7f3@stanford.edu> Message-ID: <5366C2A6-40EB-442D-9D4A-AB56DCD95B54@mcs.anl.gov> Yeah this is an error. Just keep the TSSetFromOptions() in there and it will be fine. Barry > On Jun 17, 2016, at 2:59 PM, Paul Urbanczyk wrote: > > Hello Hong, > > I went back, removed the following: > > TSAdapt ts_adapt; > TSGetAdapt(ts_solver,&ts_adapt); > TSAdaptSetType(ts_adapt,TSADAPTNONE); > > And then added the following before TSSolve(): > > TSSetFromOptions(ts_solver); > > The code runs without problem. So, it appears that the TSAdapt behavior either has to be set manually, or it needs to be set by default from TSSetFromOptions. Apparently, it is not being set correctly in TSCreate? > > Thanks, > > Paul > > > On 06/08/2016 08:47 PM, Hong Zhang wrote: >> Add TSSetFromOptions(ts_solver) before TSSolve(). Please let us know if it works. >> >> Hong >> >>> On Jun 7, 2016, at 12:49 PM, Paul Urbanczyk wrote: >>> >>> Hello, >>> >>> See below for my initial code, before adding TSSetExactFinalTime. >>> >>> That version yielded the following error: >>> >>> [0]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- >>> [0]PETSC ERROR: Object is in wrong state >>> [0]PETSC ERROR: You must call TSSetExactFinalTime() or use -ts_exact_final_time before calling TSSolve() >>> [0]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. >>> [0]PETSC ERROR: Petsc Development GIT revision: v3.7.1-449-g419beca GIT Date: 2016-06-01 15:39:33 -0500 >>> [0]PETSC ERROR: ./urbanSCFD on a arch-linux2-c-debug named prometheus by gomer Tue Jun 7 12:42:05 2016 >>> [0]PETSC ERROR: Configure options >>> [0]PETSC ERROR: #1 TSSolve() line 3946 in /home/gomer/local/petsc/src/ts/interface/ts.c >>> >>> I then added: >>> >>> TSSetExactFinalTime(ts_solver,TS_EXACTFINALTIME_STEPOVER); >>> >>> Running then yielded the following error: >>> >>> [0]PETSC ERROR: ------------------------------------------------------------------------ >>> [0]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, probably memory access out of range >>> [0]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger >>> [0]PETSC ERROR: or see http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind >>> [0]PETSC ERROR: or try http://valgrind.org on GNU/linux and Apple Mac OS X to find memory corruption errors >>> [0]PETSC ERROR: likely location of problem given in stack below >>> [0]PETSC ERROR: --------------------- Stack Frames ------------------------------------ >>> [0]PETSC ERROR: Note: The EXACT line numbers in the stack are not available, >>> [0]PETSC ERROR: INSTEAD the line number of the start of the function >>> [0]PETSC ERROR: is given. >>> [0]PETSC ERROR: [0] TSAdaptChoose line 571 /home/gomer/local/petsc/src/ts/adapt/interface/tsadapt.c >>> [0]PETSC ERROR: [0] TSStep_Euler line 20 /home/gomer/local/petsc/src/ts/impls/explicit/euler/euler.c >>> [0]PETSC ERROR: [0] TSStep line 3707 /home/gomer/local/petsc/src/ts/interface/ts.c >>> [0]PETSC ERROR: [0] TSSolve line 3928 /home/gomer/local/petsc/src/ts/interface/ts.c >>> [0]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- >>> [0]PETSC ERROR: Signal received >>> [0]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. >>> [0]PETSC ERROR: Petsc Development GIT revision: v3.7.1-449-g419beca GIT Date: 2016-06-01 15:39:33 -0500 >>> [0]PETSC ERROR: ./urbanSCFD on a arch-linux2-c-debug named prometheus by gomer Tue Jun 7 12:44:17 2016 >>> [0]PETSC ERROR: Configure options >>> [0]PETSC ERROR: #1 User provided function() line 0 in unknown file >>> -------------------------------------------------------------------------- >>> >>> Finally, I added >>> >>> TSAdapt ts_adapt; >>> TSGetAdapt(ts_solver,&ts_adapt); >>> TSAdaptSetType(ts_adapt,TSADAPTNONE); >>> >>> After adding this, the program runs without error. >>> >>> Hope that helps. >>> >>> Please let me know if I was doing something wrong before to have caused this. It's not pressing for me, though, as my code now appears to be running ok. >>> >>> -Paul >>> >>> ORIGINAL VERSION WITHOUT TSSetExactFinalTime: >>> >>> void cPETScSolverClass::SolveTSProblem() >>> { >>> if(mpi_main.getRank() == 0) >>> { >>> std::cout << "*****STARTING SOLUTION*****" << std::endl; >>> } >>> >>> // Set up the time-stepping solver object >>> TSCreate(PETSC_COMM_WORLD,&ts_solver); >>> >>> // Set the problem type to be nonlinear >>> TSSetProblemType(ts_solver,TS_NONLINEAR); >>> >>> // Point the solution to the solution vector (vector of conserved variables) >>> TSSetSolution(ts_solver,solver_main.U_cons); >>> >>> // Set the time-stepping type >>> TSSetType(ts_solver,TSEULER); >>> >>> // Set the initial time and the time step >>> TSSetInitialTimeStep(ts_solver,0.0,0.001); >>> >>> // Set the total duration (number of steps and total time) >>> TSSetDuration(ts_solver,10,0.01); >>> >>> // Point the solver to the monitor function >>> TSMonitorSet(ts_solver,solver_main.TS_Monitor,this,NULL); >>> >>> // Set the distributed array context for the solver >>> TSSetDM(ts_solver,main_da); >>> >>> // Get the nonlinear solver for the time-stepping solver >>> TSGetSNES(ts_solver,&nl_solver); >>> >>> // Write out the initial condition before the solver is started >>> WriteSolutionCSV("initial_condition.csv"); >>> >>> // Run the solver! >>> TSSolve(ts_solver,solver_main.U_cons); >>> >>> if(mpi_main.getRank() == 0) >>> { >>> std::cout << "-----COMPLETED SOLUTION-----" << std::endl; >>> } >>> >>> // Write out the solution at the end >>> WriteSolutionCSV("output_test.csv"); >>> >>> // Destroy the time-stepping solver >>> TSDestroy(&ts_solver); >>> >>> } >>> >>> >>> NEW VERSION WITH TSSetExactFinalTime and TSAdaptSetType: >>> >>> void cPETScSolverClass::SolveTSProblem() >>> { >>> if(mpi_main.getRank() == 0) >>> { >>> std::cout << "*****STARTING SOLUTION*****" << std::endl; >>> } >>> >>> // Set up the time-stepping solver object >>> TSCreate(PETSC_COMM_WORLD,&ts_solver); >>> >>> // Set the problem type to be nonlinear >>> TSSetProblemType(ts_solver,TS_NONLINEAR); >>> >>> // Point the solution to the solution vector (vector of conserved variables) >>> TSSetSolution(ts_solver,solver_main.U_cons); >>> >>> // Set the time-stepping type >>> TSSetType(ts_solver,TSEULER); >>> >>> // Set the initial time and the time step >>> TSSetInitialTimeStep(ts_solver,0.0,0.001); >>> >>> // Set the total duration (number of steps and total time) >>> TSSetDuration(ts_solver,1,0.001); >>> >>> // Set TS exact final time behavior >>> TSSetExactFinalTime(ts_solver,TS_EXACTFINALTIME_STEPOVER); >>> >>> // Set TS adaptive time stepping behavior >>> TSAdapt ts_adapt; >>> TSGetAdapt(ts_solver,&ts_adapt); >>> TSAdaptSetType(ts_adapt,TSADAPTNONE); >>> >>> // Point the solver to the function which evaluates the right hand side >>> TSSetRHSFunction(ts_solver,solver_main.RHS,solver_main.FormFunction,this); >>> >>> // Point the solver to the monitor function >>> TSMonitorSet(ts_solver,solver_main.TS_Monitor,this,NULL); >>> >>> // Set the distributed array context for the solver >>> TSSetDM(ts_solver,main_da); >>> >>> // Get the nonlinear solver for the time-stepping solver >>> TSGetSNES(ts_solver,&nl_solver); >>> >>> // Write out the initial condition before the solver is started >>> WriteSolutionCSV("initial_condition.csv"); >>> >>> // Run the solver! >>> TSSolve(ts_solver,solver_main.U_cons); >>> >>> if(mpi_main.getRank() == 0) >>> { >>> std::cout << "-----COMPLETED SOLUTION-----" << std::endl; >>> } >>> >>> // Write out the solution at the end >>> WriteSolutionCSV("output_test.csv"); >>> >>> // Destroy the time-stepping solver >>> TSDestroy(&ts_solver); >>> >>> } >>> >>> >>> On 06/05/2016 06:44 PM, Barry Smith wrote: >>>> Paul, >>>> >>>> I don't think this was an expected change. Can you send code or walk us through the steps that led you to this? >>>> >>>> Barry >>>> >>>> >>>>> On Jun 3, 2016, at 10:23 AM, Paul Urbanczyk wrote: >>>>> >>>>> Hello, >>>>> >>>>> I recently upgraded to the latest version of PETSc (3.7.1) from the git repository. >>>>> >>>>> Running my code gave me an error message about TSSolve being in the wrong state and needing to call TSSetExactFinalTime. >>>>> >>>>> I added this function call with TS_EXACTFINALTIME_STEPOVER, but when I re-ran my code, I got a seg fault and error messages pointing to TSAdaptChoose. >>>>> >>>>> After fiddling around for a while, I found that I now needed to explicitly set the time step adaptation through TSAdaptSetType. >>>>> >>>>> Can anyone confirm that this is so? If so, it might be helpful to note that in documentation or error messages somewhere. >>>>> >>>>> Thanks, >>>>> >>>>> Paul >>>>> >>>>> >>> > > From Eric.Chamberland at giref.ulaval.ca Fri Jun 17 15:55:49 2016 From: Eric.Chamberland at giref.ulaval.ca (Eric Chamberland) Date: Fri, 17 Jun 2016 16:55:49 -0400 Subject: [petsc-users] On the edge of 2^31 unknowns In-Reply-To: <30507352-1B79-4338-B839-A066159C8CA8@mcs.anl.gov> References: <5649F85A.9020807@giref.ulaval.ca> <564A0E55.4010909@giref.ulaval.ca> <869E52FA-3DED-4274-8FBA-C7749F5BBD63@mcs.anl.gov> <564A1FE8.2030404@giref.ulaval.ca> <30507352-1B79-4338-B839-A066159C8CA8@mcs.anl.gov> Message-ID: <576463D5.6060002@giref.ulaval.ca> Hi, We got the another run on the cluster with petsc 3.5.4 compiled with 64 bit indices (see end of message for configure options). This time, the execution terminated with a segmentation violation with the following backtrace: Thu Jun 16 16:03:08 2016:#000: reqBacktrace(std::string&) >>> /rap/jsf-051-aa/ericc/GIREF/bin/probGD.opt Thu Jun 16 16:03:08 2016:#001: attacheDebugger() >>> /rap/jsf-051-aa/ericc/GIREF/bin/probGD.opt Thu Jun 16 16:03:08 2016:#002: /rap/jsf-051-aa/ericc/GIREF/lib/libgiref_opt_Util.so(traitementSignal+0x305) [0x2b6c4885a875] Thu Jun 16 16:03:08 2016:#003: /lib64/libc.so.6(+0x326a0) [0x2b6c502156a0] Thu Jun 16 16:03:08 2016:#004: /software6/mpi/openmpi/1.8.8_intel/lib/libopen-pal.so.6(opal_memory_ptmalloc2_int_malloc+0xee5) [0x2b6c55e99ab5] Thu Jun 16 16:03:08 2016:#005: /software6/mpi/openmpi/1.8.8_intel/lib/libopen-pal.so.6(opal_memory_ptmalloc2_malloc+0x58) [0x2b6c55e9b8f8] Thu Jun 16 16:03:08 2016:#006: /software6/mpi/openmpi/1.8.8_intel/lib/libopen-pal.so.6(opal_memory_ptmalloc2_memalign+0x3ff) [0x2b6c55e9c50f] Thu Jun 16 16:03:08 2016:#007: /software6/libs/petsc/3.5.4_intel_openmpi1.8.8/lib/libpetsc.so.3.5(PetscMallocAlign+0x17) [0x2b6c4a49ecc7] Thu Jun 16 16:03:08 2016:#008: /software6/libs/petsc/3.5.4_intel_openmpi1.8.8/lib/libpetsc.so.3.5(MatMatMultSymbolic_MPIAIJ_MPIAIJ+0x37d) [0x2b6c4a915eed] Thu Jun 16 16:03:08 2016:#009: /software6/libs/petsc/3.5.4_intel_openmpi1.8.8/lib/libpetsc.so.3.5(MatMatMult_MPIAIJ_MPIAIJ+0x1a3) [0x2b6c4a915713] Thu Jun 16 16:03:08 2016:#010: /software6/libs/petsc/3.5.4_intel_openmpi1.8.8/lib/libpetsc.so.3.5(MatMatMult+0x5f4) [0x2b6c4a630f44] Thu Jun 16 16:03:08 2016:#011: girefMatMatMult(MatricePETSc const&, MatricePETSc const&, MatricePETSc&, MatReuse) >>> /rap/jsf-051-aa/ericc/GIREF/lib/libgiref_opt_Petsc.so Now looking at the MatMatMultSymbolic_MPIAIJ_MPIAIJ modifications, since I run in 64 bit indices, there is something either really bad with what we try to do or maybe there is still something in this routine... What is your advice and how could I retreive more information if I can launch it again? Is a -malloc_dump or -malloc_log would help or anything else? (the very same calculus passed with 240M unknowns). Thanks for your insights! Eric here are the configure options: static const char *petscconfigureoptions = "PETSC_ARCH=linux-gnu-intel CFLAGS=\"-O3 -xHost -mkl -fPIC -m64 -no-diag-message-catalog\" FFLAGS=\"-O3 -xHost -mkl -fPIC -m64 -no-diag-message-catalog\" --prefix=/sof tware6/libs/petsc/3.5.4_intel_openmpi1.8.8 --with-x=0 --with-mpi-compilers=1 --with-mpi-dir=/software6/mpi/openmpi/1.8.8_intel --known-mpi-shared-libraries=1 --with-debugging=no --with-64-bit-indices=1 --with-s hared-libraries=1 --with-blas-lapack-dir=/software6/compilers/intel/composer_xe_2013_sp1.0.080/mkl/lib/intel64 --with-scalapack=1 --with-scalapack-include=/software6/compilers/intel/composer_xe_2013_sp1.0.080/m kl/include --with-scalapack-lib=\"-lmkl_scalapack_lp64 -lmkl_blacs_openmpi_lp64\" --download-ptscotch=1 --download-superlu_dist=yes --download-parmetis=yes --download-metis=yes --download-hypre=yes"; On 16/11/15 07:12 PM, Barry Smith wrote: > > I have started a branch with utilities to help catch/handle these integer overflow issues https://bitbucket.org/petsc/petsc/pull-requests/389/add-utilities-for-handling-petscint/diff all suggestions are appreciated > > Barry > >> On Nov 16, 2015, at 12:26 PM, Eric Chamberland wrote: >> >> Barry, >> >> I can't launch the code again and retrieve other informations, since I am not allowed to do so: the cluster have around ~780 nodes and I got a very special permission to reserve 530 of them... >> >> So the best I can do is to give you the backtrace PETSc gave me... :/ >> (see the first post with the backtrace: http://lists.mcs.anl.gov/pipermail/petsc-users/2015-November/027644.html) >> >> And until today, all smaller meshes with the same solver succeeded to complete... (I went up to 219 millions of unknowns on 64 nodes). >> >> I understand then that there could be some use of PetscInt64 in the actual code that would help fix problems like the one I got. I found it is a big challenge to track down all occurrence of this kind of overflow in the code, due to the size of the systems you have to have to reproduce this problem.... >> >> Eric >> >> >> On 16/11/15 12:40 PM, Barry Smith wrote: >>> >>> Eric, >>> >>> The behavior you get with bizarre integers and a crash is not the behavior we want. We would like to detect these overflows appropriately. If you can track through the error and determine the location where the overflow occurs then we would gladly put in additional checks and use of PetscInt64 to handle these things better. So let us know the exact cause and we'll improve the code. >>> >>> Barry >>> >>> >>> >>>> On Nov 16, 2015, at 11:11 AM, Eric Chamberland wrote: >>>> >>>> On 16/11/15 10:42 AM, Matthew Knepley wrote: >>>>> Sometimes when we do not have exact counts, we need to overestimate >>>>> sizes. This is especially true >>>>> in sparse MatMat. >>>> >>>> Ok... so, to be sure, I am correct if I say that recompiling petsc with >>>> "--with-64-bit-indices" is the only solution to my problem? >>>> >>>> I mean, no other fixes exist for this overestimation in a more recent release of petsc, like putting the result in a "long int" instead? >>>> >>>> Thanks, >>>> >>>> Eric >>>> >> From bsmith at mcs.anl.gov Fri Jun 17 16:02:35 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Fri, 17 Jun 2016 16:02:35 -0500 Subject: [petsc-users] On the edge of 2^31 unknowns In-Reply-To: <576463D5.6060002@giref.ulaval.ca> References: <5649F85A.9020807@giref.ulaval.ca> <564A0E55.4010909@giref.ulaval.ca> <869E52FA-3DED-4274-8FBA-C7749F5BBD63@mcs.anl.gov> <564A1FE8.2030404@giref.ulaval.ca> <30507352-1B79-4338-B839-A066159C8CA8@mcs.anl.gov> <576463D5.6060002@giref.ulaval.ca> Message-ID: Run with the debug version of the libraries under valgrind http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind to see if any memory corruption issues come up. My guess is simply that it has run out of allocatable memory. Barry > On Jun 17, 2016, at 3:55 PM, Eric Chamberland wrote: > > Hi, > > We got the another run on the cluster with petsc 3.5.4 compiled with 64 bit indices (see end of message for configure options). > > This time, the execution terminated with a segmentation violation with the following backtrace: > > Thu Jun 16 16:03:08 2016:#000: reqBacktrace(std::string&) >>> /rap/jsf-051-aa/ericc/GIREF/bin/probGD.opt > Thu Jun 16 16:03:08 2016:#001: attacheDebugger() >>> /rap/jsf-051-aa/ericc/GIREF/bin/probGD.opt > Thu Jun 16 16:03:08 2016:#002: /rap/jsf-051-aa/ericc/GIREF/lib/libgiref_opt_Util.so(traitementSignal+0x305) [0x2b6c4885a875] > Thu Jun 16 16:03:08 2016:#003: /lib64/libc.so.6(+0x326a0) [0x2b6c502156a0] > Thu Jun 16 16:03:08 2016:#004: /software6/mpi/openmpi/1.8.8_intel/lib/libopen-pal.so.6(opal_memory_ptmalloc2_int_malloc+0xee5) [0x2b6c55e99ab5] > Thu Jun 16 16:03:08 2016:#005: /software6/mpi/openmpi/1.8.8_intel/lib/libopen-pal.so.6(opal_memory_ptmalloc2_malloc+0x58) [0x2b6c55e9b8f8] > Thu Jun 16 16:03:08 2016:#006: /software6/mpi/openmpi/1.8.8_intel/lib/libopen-pal.so.6(opal_memory_ptmalloc2_memalign+0x3ff) [0x2b6c55e9c50f] > Thu Jun 16 16:03:08 2016:#007: /software6/libs/petsc/3.5.4_intel_openmpi1.8.8/lib/libpetsc.so.3.5(PetscMallocAlign+0x17) [0x2b6c4a49ecc7] > Thu Jun 16 16:03:08 2016:#008: /software6/libs/petsc/3.5.4_intel_openmpi1.8.8/lib/libpetsc.so.3.5(MatMatMultSymbolic_MPIAIJ_MPIAIJ+0x37d) [0x2b6c4a915eed] > Thu Jun 16 16:03:08 2016:#009: /software6/libs/petsc/3.5.4_intel_openmpi1.8.8/lib/libpetsc.so.3.5(MatMatMult_MPIAIJ_MPIAIJ+0x1a3) [0x2b6c4a915713] > Thu Jun 16 16:03:08 2016:#010: /software6/libs/petsc/3.5.4_intel_openmpi1.8.8/lib/libpetsc.so.3.5(MatMatMult+0x5f4) [0x2b6c4a630f44] > Thu Jun 16 16:03:08 2016:#011: girefMatMatMult(MatricePETSc const&, MatricePETSc const&, MatricePETSc&, MatReuse) >>> /rap/jsf-051-aa/ericc/GIREF/lib/libgiref_opt_Petsc.so > > Now looking at the MatMatMultSymbolic_MPIAIJ_MPIAIJ modifications, since I run in 64 bit indices, there is something either really bad with what we try to do or maybe there is still something in this routine... > > What is your advice and how could I retreive more information if I can launch it again? > > Is a -malloc_dump or -malloc_log would help or anything else? > > (the very same calculus passed with 240M unknowns). > > Thanks for your insights! > > Eric > > here are the configure options: > static const char *petscconfigureoptions = "PETSC_ARCH=linux-gnu-intel CFLAGS=\"-O3 -xHost -mkl -fPIC -m64 -no-diag-message-catalog\" FFLAGS=\"-O3 -xHost -mkl -fPIC -m64 -no-diag-message-catalog\" --prefix=/sof > tware6/libs/petsc/3.5.4_intel_openmpi1.8.8 --with-x=0 --with-mpi-compilers=1 --with-mpi-dir=/software6/mpi/openmpi/1.8.8_intel --known-mpi-shared-libraries=1 --with-debugging=no --with-64-bit-indices=1 --with-s > hared-libraries=1 --with-blas-lapack-dir=/software6/compilers/intel/composer_xe_2013_sp1.0.080/mkl/lib/intel64 --with-scalapack=1 --with-scalapack-include=/software6/compilers/intel/composer_xe_2013_sp1.0.080/m > kl/include --with-scalapack-lib=\"-lmkl_scalapack_lp64 -lmkl_blacs_openmpi_lp64\" --download-ptscotch=1 --download-superlu_dist=yes --download-parmetis=yes --download-metis=yes --download-hypre=yes"; > > > On 16/11/15 07:12 PM, Barry Smith wrote: >> >> I have started a branch with utilities to help catch/handle these integer overflow issues https://bitbucket.org/petsc/petsc/pull-requests/389/add-utilities-for-handling-petscint/diff all suggestions are appreciated >> >> Barry >> >>> On Nov 16, 2015, at 12:26 PM, Eric Chamberland wrote: >>> >>> Barry, >>> >>> I can't launch the code again and retrieve other informations, since I am not allowed to do so: the cluster have around ~780 nodes and I got a very special permission to reserve 530 of them... >>> >>> So the best I can do is to give you the backtrace PETSc gave me... :/ >>> (see the first post with the backtrace: http://lists.mcs.anl.gov/pipermail/petsc-users/2015-November/027644.html) >>> >>> And until today, all smaller meshes with the same solver succeeded to complete... (I went up to 219 millions of unknowns on 64 nodes). >>> >>> I understand then that there could be some use of PetscInt64 in the actual code that would help fix problems like the one I got. I found it is a big challenge to track down all occurrence of this kind of overflow in the code, due to the size of the systems you have to have to reproduce this problem.... >>> >>> Eric >>> >>> >>> On 16/11/15 12:40 PM, Barry Smith wrote: >>>> >>>> Eric, >>>> >>>> The behavior you get with bizarre integers and a crash is not the behavior we want. We would like to detect these overflows appropriately. If you can track through the error and determine the location where the overflow occurs then we would gladly put in additional checks and use of PetscInt64 to handle these things better. So let us know the exact cause and we'll improve the code. >>>> >>>> Barry >>>> >>>> >>>> >>>>> On Nov 16, 2015, at 11:11 AM, Eric Chamberland wrote: >>>>> >>>>> On 16/11/15 10:42 AM, Matthew Knepley wrote: >>>>>> Sometimes when we do not have exact counts, we need to overestimate >>>>>> sizes. This is especially true >>>>>> in sparse MatMat. >>>>> >>>>> Ok... so, to be sure, I am correct if I say that recompiling petsc with >>>>> "--with-64-bit-indices" is the only solution to my problem? >>>>> >>>>> I mean, no other fixes exist for this overestimation in a more recent release of petsc, like putting the result in a "long int" instead? >>>>> >>>>> Thanks, >>>>> >>>>> Eric >>>>> >>> > From gomer at stanford.edu Fri Jun 17 19:05:37 2016 From: gomer at stanford.edu (Paul Urbanczyk) Date: Fri, 17 Jun 2016 17:05:37 -0700 Subject: [petsc-users] Round-off / Machine Zero with MatMult In-Reply-To: References: Message-ID: <7788f25a-cd0a-3c76-d34f-aef2d0be3c99@stanford.edu> Sure... I understand that floating point calculations will not always yield exact zero for a number of reasons. The question I have is why some of the results are exactly zero and others are not. I.e. why aren't the numbers all the same? What is different about the calculation in rows 0, 1, 8, and 9 from the other rows (2, 3, 4, 5, 6, 7)? Thanks, Paul On 06/17/2016 01:06 PM, Matthew Knepley wrote: > On Fri, Jun 17, 2016 at 2:47 PM, Paul Urbanczyk > wrote: > > Hello all, > > I'm using PETSc's "MatMult" function - MatMult(Mat A, Vec x, Vec > y) - to do a matrix-vector multiply. The Matrix, A, is > anti-symmetric, and the vector, x, is uniform. Thus, the resulting > vector, y, should be all zeros. > > The output I'm seeing typically looks like the following: > > Vec Object: Vec_0x20b2000_2 1 MPI processes > type: mpi > Process [0] > 0. > 0. > -2.08167e-17 > -2.08167e-17 > -2.08167e-17 > -2.08167e-17 > -2.08167e-17 > -2.08167e-17 > 0. > 0. > > Now, I know that -2.08167e-17 is machine zero, but I'm a bit > confused why a few of the entries would be exactly zero while > others are "machine zero." I would expect them all to be either > exactly zero, or machine zero, but not a mixture. Do you have any > idea why this might be? > > > The order of addition matter for roundoff errors. > > Thanks, > > Matt > > Thanks for your help! > > -Paul > > > -- > What most experimenters take for granted before they begin their > experiments is infinitely more interesting than any results to which > their experiments lead. > -- Norbert Wiener -------------- next part -------------- An HTML attachment was scrubbed... URL: From knepley at gmail.com Fri Jun 17 19:09:47 2016 From: knepley at gmail.com (Matthew Knepley) Date: Fri, 17 Jun 2016 19:09:47 -0500 Subject: [petsc-users] Round-off / Machine Zero with MatMult In-Reply-To: <7788f25a-cd0a-3c76-d34f-aef2d0be3c99@stanford.edu> References: <7788f25a-cd0a-3c76-d34f-aef2d0be3c99@stanford.edu> Message-ID: On Fri, Jun 17, 2016 at 7:05 PM, Paul Urbanczyk wrote: > Sure... I understand that floating point calculations will not always > yield exact zero for a number of reasons. > > The question I have is why some of the results are exactly zero and others > are not. I.e. why aren't the numbers all the same? What is different about > the calculation in rows 0, 1, 8, and 9 from the other rows (2, 3, 4, 5, 6, > 7)? > Different order of operations. Matt > Thanks, > > Paul > > On 06/17/2016 01:06 PM, Matthew Knepley wrote: > > On Fri, Jun 17, 2016 at 2:47 PM, Paul Urbanczyk > wrote: > >> Hello all, >> >> I'm using PETSc's "MatMult" function - MatMult(Mat A, Vec x, Vec y) - to >> do a matrix-vector multiply. The Matrix, A, is anti-symmetric, and the >> vector, x, is uniform. Thus, the resulting vector, y, should be all zeros. >> >> The output I'm seeing typically looks like the following: >> >> Vec Object: Vec_0x20b2000_2 1 MPI processes >> type: mpi >> Process [0] >> 0. >> 0. >> -2.08167e-17 >> -2.08167e-17 >> -2.08167e-17 >> -2.08167e-17 >> -2.08167e-17 >> -2.08167e-17 >> 0. >> 0. >> >> Now, I know that -2.08167e-17 is machine zero, but I'm a bit confused why >> a few of the entries would be exactly zero while others are "machine zero." >> I would expect them all to be either exactly zero, or machine zero, but not >> a mixture. Do you have any idea why this might be? >> > > The order of addition matter for roundoff errors. > > Thanks, > > Matt > > >> Thanks for your help! >> >> -Paul >> > > -- > What most experimenters take for granted before they begin their > experiments is infinitely more interesting than any results to which their > experiments lead. > -- Norbert Wiener > > > -- What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead. -- Norbert Wiener -------------- next part -------------- An HTML attachment was scrubbed... URL: From bsmith at mcs.anl.gov Fri Jun 17 20:51:43 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Fri, 17 Jun 2016 20:51:43 -0500 Subject: [petsc-users] MatPermute for MPIBAIJ matrix Error In-Reply-To: <57635E5B.6020404@siat.ac.cn> References: <57635E5B.6020404@siat.ac.cn> Message-ID: <03FA8EA8-813E-4BD8-A69F-1E3D3D43B6D3@mcs.anl.gov> Uggh, this is a horrible mess. In short we don't support permutations in parallel. Even for MPIAIJ matrices it is bogus in that it just independently provides a reordering for the matrix on each process. This kind of parallel graph processing is something that is really weak in PETSc. Why do you want to permute a parallel matrix? We always recommend that one partition the mesh data structure for good performance before ever calling the PETSc routines. In this way the linear algebra is already well partitioned and doesn't need permutations. Barry > On Jun 16, 2016, at 9:20 PM, Rongliang Chen wrote: > > Dear All, > > I failed to use the MatPermute to permute a MPIBAIJ matrix. The error message is followed, which was obtained by run the example petsc-3.6.3/src/ksp/ksp/examples/tutorials/ex18.c with options: mpirun -n 3 ./ex18 -m 39 -n 18 -ksp_monitor_short -permute nd -mat_type mpibaij -mat_block_size 1 -ksp_view > > Can anyone tell me how to permute a MPIBAIJ matrix? Thanks. > > ==================================================================================== > [2]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- > [2]PETSC ERROR: Nonconforming object sizes > [2]PETSC ERROR: Local column sizes 702 do not add up to total number of columns 234 > [2]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. > [2]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015 > [2]PETSC ERROR: ./ex18 on a 64bit-debug named rlchen by rlchen Fri Jun 17 10:10:49 2016 > [2]PETSC ERROR: Configure options --download-blacs --download-scalapack --download-metis --download-parmetis --download-exodusii --download-netcdf --download-hdf5 --with-mpi-dir=/home/rlchen/soft/Program/mpich2-shared --with-debugging=1 --download-fblaslapack --with-64-bit-indices > [2]PETSC ERROR: #1 MatGetSubMatrix_MPIBAIJ_Private() line 2261 in /home/rlchen/soft/petsc-3.6.3/src/mat/impls/baij/mpi/mpibaij.c > [2]PETSC ERROR: #2 MatPermute_MPIBAIJ() line 2358 in /home/rlchen/soft/petsc-3.6.3/src/mat/impls/baij/mpi/mpibaij.c > [2]PETSC ERROR: #3 MatPermute() line 4759 in /home/rlchen/soft/petsc-3.6.3/src/mat/interface/matrix.c > [2]PETSC ERROR: #4 main() line 171 in /home/rlchen/soft/petsc-3.6.3/src/ksp/ksp/examples/tutorials/ex18.c > [2]PETSC ERROR: PETSc Option Table entries: > [2]PETSC ERROR: -ksp_monitor_short > [2]PETSC ERROR: -ksp_view > [2]PETSC ERROR: -m 39 > [2]PETSC ERROR: -mat_block_size 1 > [2]PETSC ERROR: -mat_type mpibaij > [2]PETSC ERROR: -n 18 > [2]PETSC ERROR: -permute nd > [2]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint at mcs.anl.gov---------- > application called MPI_Abort(MPI_COMM_WORLD, 60) - process 2 > > ===================================================================================== > = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES > = EXIT CODE: 15360 > = CLEANING UP REMAINING PROCESSES > = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES > ===================================================================================== > > Best regards, > Rongliang > From jed at jedbrown.org Fri Jun 17 22:44:14 2016 From: jed at jedbrown.org (Jed Brown) Date: Fri, 17 Jun 2016 21:44:14 -0600 Subject: [petsc-users] MatPermute for MPIBAIJ matrix Error In-Reply-To: <03FA8EA8-813E-4BD8-A69F-1E3D3D43B6D3@mcs.anl.gov> References: <57635E5B.6020404@siat.ac.cn> <03FA8EA8-813E-4BD8-A69F-1E3D3D43B6D3@mcs.anl.gov> Message-ID: <8737obnott.fsf@jedbrown.org> Barry Smith writes: > Uggh, this is a horrible mess. In short we don't support permutations in parallel. Even for MPIAIJ matrices it is bogus in that it just independently provides a reordering for the matrix on each process. This kind of parallel graph processing is something that is really weak in PETSc. Note that one can use MatGetSubMatrix to do a "permutation" in which the requested rows/columns are sorted on each process, then (if you want) locally permute the submatrix. It's cumbersome, but should work. > Why do you want to permute a parallel matrix? We always recommend that one partition the mesh data structure for good performance before ever calling the PETSc routines. In this way the linear algebra is already well partitioned and doesn't need permutations. Yes, partitioning the mesh is much better than redistributing an assembled matrix. -------------- next part -------------- A non-text attachment was scrubbed... Name: signature.asc Type: application/pgp-signature Size: 818 bytes Desc: not available URL: From rl.chen at siat.ac.cn Fri Jun 17 22:49:30 2016 From: rl.chen at siat.ac.cn (Rongliang Chen) Date: Sat, 18 Jun 2016 11:49:30 +0800 Subject: [petsc-users] MatPermute for MPIBAIJ matrix Error In-Reply-To: <03FA8EA8-813E-4BD8-A69F-1E3D3D43B6D3@mcs.anl.gov> References: <57635E5B.6020404@siat.ac.cn> <03FA8EA8-813E-4BD8-A69F-1E3D3D43B6D3@mcs.anl.gov> Message-ID: <5764C4CA.50708@siat.ac.cn> Dear Barry, Many thanks for your reply. In fact, we want to permute a sequential matrix which is a BAIJ matrix (the sub matrix of the ASM) to reduce the bandwidth of the sub-matrix and solve this sub-problem in parallel on a many-core processor. But we found that the MatPermute does not support the sequential BAIJ matrix, and it has a version for the parallel BAIJ matrix. So we try to use this to reduce the bandwidth. Do you have any suggestions for us to reduce the bandwidth of the sub-matrix? Thanks. Best regards, Rongliang On 06/18/2016 09:51 AM, Barry Smith wrote: > Uggh, this is a horrible mess. In short we don't support permutations in parallel. Even for MPIAIJ matrices it is bogus in that it just independently provides a reordering for the matrix on each process. This kind of parallel graph processing is something that is really weak in PETSc. > > Why do you want to permute a parallel matrix? We always recommend that one partition the mesh data structure for good performance before ever calling the PETSc routines. In this way the linear algebra is already well partitioned and doesn't need permutations. > > Barry > > > >> On Jun 16, 2016, at 9:20 PM, Rongliang Chen wrote: >> >> Dear All, >> >> I failed to use the MatPermute to permute a MPIBAIJ matrix. The error message is followed, which was obtained by run the example petsc-3.6.3/src/ksp/ksp/examples/tutorials/ex18.c with options: mpirun -n 3 ./ex18 -m 39 -n 18 -ksp_monitor_short -permute nd -mat_type mpibaij -mat_block_size 1 -ksp_view >> >> Can anyone tell me how to permute a MPIBAIJ matrix? Thanks. >> >> ==================================================================================== >> [2]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- >> [2]PETSC ERROR: Nonconforming object sizes >> [2]PETSC ERROR: Local column sizes 702 do not add up to total number of columns 234 >> [2]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. >> [2]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015 >> [2]PETSC ERROR: ./ex18 on a 64bit-debug named rlchen by rlchen Fri Jun 17 10:10:49 2016 >> [2]PETSC ERROR: Configure options --download-blacs --download-scalapack --download-metis --download-parmetis --download-exodusii --download-netcdf --download-hdf5 --with-mpi-dir=/home/rlchen/soft/Program/mpich2-shared --with-debugging=1 --download-fblaslapack --with-64-bit-indices >> [2]PETSC ERROR: #1 MatGetSubMatrix_MPIBAIJ_Private() line 2261 in /home/rlchen/soft/petsc-3.6.3/src/mat/impls/baij/mpi/mpibaij.c >> [2]PETSC ERROR: #2 MatPermute_MPIBAIJ() line 2358 in /home/rlchen/soft/petsc-3.6.3/src/mat/impls/baij/mpi/mpibaij.c >> [2]PETSC ERROR: #3 MatPermute() line 4759 in /home/rlchen/soft/petsc-3.6.3/src/mat/interface/matrix.c >> [2]PETSC ERROR: #4 main() line 171 in /home/rlchen/soft/petsc-3.6.3/src/ksp/ksp/examples/tutorials/ex18.c >> [2]PETSC ERROR: PETSc Option Table entries: >> [2]PETSC ERROR: -ksp_monitor_short >> [2]PETSC ERROR: -ksp_view >> [2]PETSC ERROR: -m 39 >> [2]PETSC ERROR: -mat_block_size 1 >> [2]PETSC ERROR: -mat_type mpibaij >> [2]PETSC ERROR: -n 18 >> [2]PETSC ERROR: -permute nd >> [2]PETSC ERROR: ----------------End of Error Message -------send entire error message to petsc-maint at mcs.anl.gov---------- >> application called MPI_Abort(MPI_COMM_WORLD, 60) - process 2 >> >> ===================================================================================== >> = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES >> = EXIT CODE: 15360 >> = CLEANING UP REMAINING PROCESSES >> = YOU CAN IGNORE THE BELOW CLEANUP MESSAGES >> ===================================================================================== >> >> Best regards, >> Rongliang >> > From jed at jedbrown.org Fri Jun 17 23:01:12 2016 From: jed at jedbrown.org (Jed Brown) Date: Fri, 17 Jun 2016 22:01:12 -0600 Subject: [petsc-users] MatPermute for MPIBAIJ matrix Error In-Reply-To: <5764C4CA.50708@siat.ac.cn> References: <57635E5B.6020404@siat.ac.cn> <03FA8EA8-813E-4BD8-A69F-1E3D3D43B6D3@mcs.anl.gov> <5764C4CA.50708@siat.ac.cn> Message-ID: <87wplnm9h3.fsf@jedbrown.org> Rongliang Chen writes: > Dear Barry, > > Many thanks for your reply. > > In fact, we want to permute a sequential matrix which is a BAIJ matrix > (the sub matrix of the ASM) BJACOBI supports multiprocess subdomains. GASM is supposed to support multiprocess subdomains, though it's not very well tested. > to reduce the bandwidth of the sub-matrix Why do you want to reduce the bandwidth? What kind of solver are you using? -------------- next part -------------- A non-text attachment was scrubbed... Name: signature.asc Type: application/pgp-signature Size: 818 bytes Desc: not available URL: From rl.chen at siat.ac.cn Fri Jun 17 23:21:05 2016 From: rl.chen at siat.ac.cn (Rongliang Chen) Date: Sat, 18 Jun 2016 12:21:05 +0800 Subject: [petsc-users] MatPermute for MPIBAIJ matrix Error In-Reply-To: <87wplnm9h3.fsf@jedbrown.org> References: <57635E5B.6020404@siat.ac.cn> <03FA8EA8-813E-4BD8-A69F-1E3D3D43B6D3@mcs.anl.gov> <5764C4CA.50708@siat.ac.cn> <87wplnm9h3.fsf@jedbrown.org> Message-ID: <5764CC31.80904@siat.ac.cn> Hi Jed, Many thanks for your suggestions. We are using a parallel SOR as the local solver and in the SOR, we want to ignore the nonzeros not on this thread, but we hope to keep the nonzeros as much as possible, so reduce the bandwidth is a possible way to keep the nonzeros. Best regards, Rongliang On 06/18/2016 12:01 PM, Jed Brown wrote: > Rongliang Chen writes: > >> Dear Barry, >> >> Many thanks for your reply. >> >> In fact, we want to permute a sequential matrix which is a BAIJ matrix >> (the sub matrix of the ASM) > BJACOBI supports multiprocess subdomains. GASM is supposed to support > multiprocess subdomains, though it's not very well tested. > >> to reduce the bandwidth of the sub-matrix > Why do you want to reduce the bandwidth? What kind of solver are you using? From Sander.Arens at ugent.be Sat Jun 18 08:56:05 2016 From: Sander.Arens at ugent.be (Sander Arens) Date: Sat, 18 Jun 2016 15:56:05 +0200 Subject: [petsc-users] Problem with interpolating projected field of quadratic order Message-ID: Hello all, Recently I've been trying to run a fem problem using DMPlex, PetscFE, etc. using a mesh created with gmsh. I used DMPlexReverseCell to get rid of the negative jacobian determinants. However, I noticed another problem: when I projected the coordinates on a quadratic fem-field and interpolated them they didn't match the interpolated values of the original coordinate field anymore. I attached a simple test to reproduce this. With linear interpolation I see no problem, it's only when I start using quadratic interpolation. I have no idea why this is giving problems. Am I missing something simple here or is this a bug? Thanks, Sander -------------- next part -------------- An HTML attachment was scrubbed... URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: test.c Type: text/x-csrc Size: 9033 bytes Desc: not available URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: makefile Type: application/octet-stream Size: 2749 bytes Desc: not available URL: From knepley at gmail.com Sat Jun 18 09:26:40 2016 From: knepley at gmail.com (Matthew Knepley) Date: Sat, 18 Jun 2016 09:26:40 -0500 Subject: [petsc-users] Problem with interpolating projected field of quadratic order In-Reply-To: References: Message-ID: On Sat, Jun 18, 2016 at 8:56 AM, Sander Arens wrote: > Hello all, > > Recently I've been trying to run a fem problem using DMPlex, PetscFE, etc. > using a mesh created with gmsh. I used DMPlexReverseCell to get rid of the > negative jacobian determinants. However, I noticed another problem: when I > projected the coordinates on a quadratic fem-field and interpolated them > they didn't match the interpolated values of the original coordinate field > anymore. > > I attached a simple test to reproduce this. With linear interpolation I > see no problem, it's only when I start using quadratic interpolation. > > I have no idea why this is giving problems. Am I missing something simple > here or is this a bug? > Tests for this already exist https://bitbucket.org/petsc/petsc/src/996a00f1a1693e2d85044ed633fe1848cf357f2a/src/dm/impls/plex/examples/tests/ex3.c?at=master&fileviewer=file-view-default with run parameters here: https://bitbucket.org/petsc/petsc/src/996a00f1a1693e2d85044ed633fe1848cf357f2a/config/builder.py?at=master&fileviewer=file-view-default#builder.py-58 and specifically for P2 triangles https://bitbucket.org/petsc/petsc/src/996a00f1a1693e2d85044ed633fe1848cf357f2a/config/builder.py?at=master&fileviewer=file-view-default#builder.py-72 1) Does the test run for you? ./config/builder2.py check src/dm/impls/plex/examples/tests/ex3.c 2) If so, then could it be that you assume something about the order of functions? Thanks, Matt > Thanks, > Sander > -- What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead. -- Norbert Wiener -------------- next part -------------- An HTML attachment was scrubbed... URL: From knepley at gmail.com Sat Jun 18 09:33:00 2016 From: knepley at gmail.com (Matthew Knepley) Date: Sat, 18 Jun 2016 09:33:00 -0500 Subject: [petsc-users] Problem with interpolating projected field of quadratic order In-Reply-To: References: Message-ID: On Sat, Jun 18, 2016 at 9:26 AM, Matthew Knepley wrote: > On Sat, Jun 18, 2016 at 8:56 AM, Sander Arens > wrote: > >> Hello all, >> >> Recently I've been trying to run a fem problem using DMPlex, PetscFE, >> etc. using a mesh created with gmsh. I used DMPlexReverseCell to get rid of >> the negative jacobian determinants. However, I noticed another problem: >> when I projected the coordinates on a quadratic fem-field and interpolated >> them they didn't match the interpolated values of the original coordinate >> field anymore. >> >> I attached a simple test to reproduce this. With linear interpolation I >> see no problem, it's only when I start using quadratic interpolation. >> >> I have no idea why this is giving problems. Am I missing something simple >> here or is this a bug? >> > > Tests for this already exist > > > https://bitbucket.org/petsc/petsc/src/996a00f1a1693e2d85044ed633fe1848cf357f2a/src/dm/impls/plex/examples/tests/ex3.c?at=master&fileviewer=file-view-default > > with run parameters here: > > > https://bitbucket.org/petsc/petsc/src/996a00f1a1693e2d85044ed633fe1848cf357f2a/config/builder.py?at=master&fileviewer=file-view-default#builder.py-58 > > and specifically for P2 triangles > > > https://bitbucket.org/petsc/petsc/src/996a00f1a1693e2d85044ed633fe1848cf357f2a/config/builder.py?at=master&fileviewer=file-view-default#builder.py-72 > > 1) Does the test run for you? > > ./config/builder2.py check src/dm/impls/plex/examples/tests/ex3.c > > 2) If so, then could it be that you assume something about the order of > functions? > I am having a hard time understanding what you are doing here: /* View the projected coordinates field */ ierr = VecGetSubVector(u, fields[0], &subvec);CHKERRQ(ierr); ierr = PetscObjectSetName((PetscObject) subvec, fieldNames[0]);CHKERRQ(ierr); ierr = VecViewFromOptions(subvec, NULL, "-projectedcoordinates_vec_view");CHKERRQ(ierr); ierr = VecRestoreSubVector(u, fields[0], &subvec);CHKERRQ(ierr); /* View the interpolated coordinates field */ ierr = VecGetSubVector(u, fields[1], &subvec);CHKERRQ(ierr); ierr = PetscObjectSetName((PetscObject) subvec, fieldNames[1]);CHKERRQ(ierr); ierr = VecViewFromOptions(subvec, NULL, "-interpolatedcoordinates_vec_view");CHKERRQ(ierr); ierr = VecRestoreSubVector(u, fields[1], &subvec);CHKERRQ(ierr); So the values in 'u' are the FEM coefficients for the coordinate function {x, y}. Why are you calling 'x' projected and 'y' interpolated? Thanks, Matt > Thanks, > > Matt > > >> Thanks, >> Sander >> > > > > -- > What most experimenters take for granted before they begin their > experiments is infinitely more interesting than any results to which their > experiments lead. > -- Norbert Wiener > -- What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead. -- Norbert Wiener -------------- next part -------------- An HTML attachment was scrubbed... URL: From Sander.Arens at ugent.be Sat Jun 18 12:49:08 2016 From: Sander.Arens at ugent.be (Sander Arens) Date: Sat, 18 Jun 2016 19:49:08 +0200 Subject: [petsc-users] Problem with interpolating projected field of quadratic order In-Reply-To: References: Message-ID: > > 1) Does the test run for you? I ran the tests and they all pass. 2) If so, then could it be that you assume something about the order of > functions? I'm not really sure what you mean with this. So the values in 'u' are the FEM coefficients for the coordinate function > {x, y}. Why are you calling 'x' projected and > 'y' interpolated? > No, u is a vector with three fields which are obtained in the following way: 1) Project the coordinates onto field nr 0 so that I have the coordinates for all the dofs 2) Project the coordinates onto field nr 1, so that I get the coordinates at the centroid of the cell 3) Project field nr 0 onto field nr 2, so that I get the coordinates at the centroid of the cell I then output the values of the different fields, so that I can compare the values of field 1 and 2. What I would expect is that the values of field 1 and 2 would be the same. This is the case for field 0 being P1, but not for P2. I also projected the coordinates onto a P2 field in snes/examples/tutorials/ex77.c, but this was done using DMPlexCreateBoxMesh and gave no problems. Maybe it's some assumption on the vertex numbering in DMPlexCreateFromCellList or DMPlexCreateFromFile that I'm not aware of? I hope I made the problem clearer now? Thanks, Sander On 18 June 2016 at 16:33, Matthew Knepley wrote: > On Sat, Jun 18, 2016 at 9:26 AM, Matthew Knepley > wrote: > >> On Sat, Jun 18, 2016 at 8:56 AM, Sander Arens >> wrote: >> >>> Hello all, >>> >>> Recently I've been trying to run a fem problem using DMPlex, PetscFE, >>> etc. using a mesh created with gmsh. I used DMPlexReverseCell to get rid of >>> the negative jacobian determinants. However, I noticed another problem: >>> when I projected the coordinates on a quadratic fem-field and interpolated >>> them they didn't match the interpolated values of the original coordinate >>> field anymore. >>> >>> I attached a simple test to reproduce this. With linear interpolation I >>> see no problem, it's only when I start using quadratic interpolation. >>> >>> I have no idea why this is giving problems. Am I missing something >>> simple here or is this a bug? >>> >> >> Tests for this already exist >> >> >> https://bitbucket.org/petsc/petsc/src/996a00f1a1693e2d85044ed633fe1848cf357f2a/src/dm/impls/plex/examples/tests/ex3.c?at=master&fileviewer=file-view-default >> >> with run parameters here: >> >> >> https://bitbucket.org/petsc/petsc/src/996a00f1a1693e2d85044ed633fe1848cf357f2a/config/builder.py?at=master&fileviewer=file-view-default#builder.py-58 >> >> and specifically for P2 triangles >> >> >> https://bitbucket.org/petsc/petsc/src/996a00f1a1693e2d85044ed633fe1848cf357f2a/config/builder.py?at=master&fileviewer=file-view-default#builder.py-72 >> >> 1) Does the test run for you? >> >> ./config/builder2.py check src/dm/impls/plex/examples/tests/ex3.c >> >> 2) If so, then could it be that you assume something about the order of >> functions? >> > > I am having a hard time understanding what you are doing here: > > /* View the projected coordinates field */ > ierr = VecGetSubVector(u, fields[0], &subvec);CHKERRQ(ierr); > ierr = PetscObjectSetName((PetscObject) subvec, fieldNames[0]);CHKERRQ(ierr); > ierr = VecViewFromOptions(subvec, NULL, "-projectedcoordinates_vec_view");CHKERRQ(ierr); > ierr = VecRestoreSubVector(u, fields[0], &subvec);CHKERRQ(ierr); > > /* View the interpolated coordinates field */ > ierr = VecGetSubVector(u, fields[1], &subvec);CHKERRQ(ierr); > ierr = PetscObjectSetName((PetscObject) subvec, fieldNames[1]);CHKERRQ(ierr); > ierr = VecViewFromOptions(subvec, NULL, "-interpolatedcoordinates_vec_view");CHKERRQ(ierr); > ierr = VecRestoreSubVector(u, fields[1], &subvec);CHKERRQ(ierr); > > > So the values in 'u' are the FEM coefficients for the coordinate function > {x, y}. Why are you calling 'x' projected and > 'y' interpolated? > > Thanks, > > Matt > > >> Thanks, >> >> Matt >> >> >>> Thanks, >>> Sander >>> >> >> >> >> -- >> What most experimenters take for granted before they begin their >> experiments is infinitely more interesting than any results to which their >> experiments lead. >> -- Norbert Wiener >> > > > > -- > What most experimenters take for granted before they begin their > experiments is infinitely more interesting than any results to which their > experiments lead. > -- Norbert Wiener > -------------- next part -------------- An HTML attachment was scrubbed... URL: From knepley at gmail.com Sat Jun 18 19:17:49 2016 From: knepley at gmail.com (Matthew Knepley) Date: Sat, 18 Jun 2016 19:17:49 -0500 Subject: [petsc-users] Problem with interpolating projected field of quadratic order In-Reply-To: References: Message-ID: On Sat, Jun 18, 2016 at 12:49 PM, Sander Arens wrote: > 1) Does the test run for you? > > > I ran the tests and they all pass. > > 2) If so, then could it be that you assume something about the order of >> functions? > > > I'm not really sure what you mean with this. > > So the values in 'u' are the FEM coefficients for the coordinate function >> {x, y}. Why are you calling 'x' projected and >> 'y' interpolated? >> > > No, u is a vector with three fields which are obtained in the following > way: > > 1) Project the coordinates onto field nr 0 so that I have the coordinates > for all the dofs > 2) Project the coordinates onto field nr 1, so that I get the coordinates > at the centroid of the cell > 3) Project field nr 0 onto field nr 2, so that I get the coordinates at > the centroid of the cell > > I then output the values of the different fields, so that I can compare > the values of field 1 and 2. > > What I would expect is that the values of field 1 and 2 would be the same. > This is the case for field 0 being P1, but not for P2. > I also projected the coordinates onto a P2 field in > snes/examples/tutorials/ex77.c, but this was done using DMPlexCreateBoxMesh > and gave no problems. > Maybe it's some assumption on the vertex numbering in > DMPlexCreateFromCellList or DMPlexCreateFromFile that I'm not aware of? > > I hope I made the problem clearer now? > Okay, I see what happened now. It is indeed a shortcoming. The way I have things setup now, all fields share the quadrature since that way I can evaluate all fields in the same loop at a quadrature point. This could of course be changed at some cost. I have changed your example to run. Thanks, Matt > Thanks, > Sander > > On 18 June 2016 at 16:33, Matthew Knepley wrote: > >> On Sat, Jun 18, 2016 at 9:26 AM, Matthew Knepley >> wrote: >> >>> On Sat, Jun 18, 2016 at 8:56 AM, Sander Arens >>> wrote: >>> >>>> Hello all, >>>> >>>> Recently I've been trying to run a fem problem using DMPlex, PetscFE, >>>> etc. using a mesh created with gmsh. I used DMPlexReverseCell to get rid of >>>> the negative jacobian determinants. However, I noticed another problem: >>>> when I projected the coordinates on a quadratic fem-field and interpolated >>>> them they didn't match the interpolated values of the original coordinate >>>> field anymore. >>>> >>>> I attached a simple test to reproduce this. With linear interpolation I >>>> see no problem, it's only when I start using quadratic interpolation. >>>> >>>> I have no idea why this is giving problems. Am I missing something >>>> simple here or is this a bug? >>>> >>> >>> Tests for this already exist >>> >>> >>> https://bitbucket.org/petsc/petsc/src/996a00f1a1693e2d85044ed633fe1848cf357f2a/src/dm/impls/plex/examples/tests/ex3.c?at=master&fileviewer=file-view-default >>> >>> with run parameters here: >>> >>> >>> https://bitbucket.org/petsc/petsc/src/996a00f1a1693e2d85044ed633fe1848cf357f2a/config/builder.py?at=master&fileviewer=file-view-default#builder.py-58 >>> >>> and specifically for P2 triangles >>> >>> >>> https://bitbucket.org/petsc/petsc/src/996a00f1a1693e2d85044ed633fe1848cf357f2a/config/builder.py?at=master&fileviewer=file-view-default#builder.py-72 >>> >>> 1) Does the test run for you? >>> >>> ./config/builder2.py check src/dm/impls/plex/examples/tests/ex3.c >>> >>> 2) If so, then could it be that you assume something about the order of >>> functions? >>> >> >> I am having a hard time understanding what you are doing here: >> >> /* View the projected coordinates field */ >> ierr = VecGetSubVector(u, fields[0], &subvec);CHKERRQ(ierr); >> ierr = PetscObjectSetName((PetscObject) subvec, fieldNames[0]);CHKERRQ(ierr); >> ierr = VecViewFromOptions(subvec, NULL, "-projectedcoordinates_vec_view");CHKERRQ(ierr); >> ierr = VecRestoreSubVector(u, fields[0], &subvec);CHKERRQ(ierr); >> >> /* View the interpolated coordinates field */ >> ierr = VecGetSubVector(u, fields[1], &subvec);CHKERRQ(ierr); >> ierr = PetscObjectSetName((PetscObject) subvec, fieldNames[1]);CHKERRQ(ierr); >> ierr = VecViewFromOptions(subvec, NULL, "-interpolatedcoordinates_vec_view");CHKERRQ(ierr); >> ierr = VecRestoreSubVector(u, fields[1], &subvec);CHKERRQ(ierr); >> >> >> So the values in 'u' are the FEM coefficients for the coordinate function >> {x, y}. Why are you calling 'x' projected and >> 'y' interpolated? >> >> Thanks, >> >> Matt >> >> >>> Thanks, >>> >>> Matt >>> >>> >>>> Thanks, >>>> Sander >>>> >>> >>> >>> >>> -- >>> What most experimenters take for granted before they begin their >>> experiments is infinitely more interesting than any results to which their >>> experiments lead. >>> -- Norbert Wiener >>> >> >> >> >> -- >> What most experimenters take for granted before they begin their >> experiments is infinitely more interesting than any results to which their >> experiments lead. >> -- Norbert Wiener >> > > -- What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead. -- Norbert Wiener -------------- next part -------------- An HTML attachment was scrubbed... URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: makefile Type: application/octet-stream Size: 3079 bytes Desc: not available URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: test.c Type: text/x-csrc Size: 9261 bytes Desc: not available URL: From timothee.nicolas at gmail.com Sun Jun 19 06:53:09 2016 From: timothee.nicolas at gmail.com (=?UTF-8?Q?Timoth=C3=A9e_Nicolas?=) Date: Sun, 19 Jun 2016 13:53:09 +0200 Subject: [petsc-users] Speed of random generator Message-ID: Hi all, I am trying to generate a lot of random numbers to use in a Fokker-Planck simulation. The particles receive random kicks from a normal distribution with a specified statistics. I have some issues here: - The manual says to NOT use PetscRandomCreate for Monte Carlo simulations because it wouldn't have the same statistics across processors. I assume it would in principle apply to my Fokker-Planck simulation described above too, right? - If I want to generate the random numbers more carefully, it says I have to use PetscRandomRegister, and to check src/sys/random/impls/rand/rand.c for an example, but src/sys/random does not exist in my distribution (obtained with git). How do I find this? - There is a speed issue. On my computer, the generator is about 10 times slower than the method numpy.random.rand() of python. Is it expected ? This is alleviated by parallelization, but since I moved to FORTRAN from python in hope of accelerating my code, this is too bad. I consider moving to petsc4py, would it be a good choice? Thanks in advance Timothee -------------- next part -------------- An HTML attachment was scrubbed... URL: From bsmith at mcs.anl.gov Sun Jun 19 13:43:14 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Sun, 19 Jun 2016 13:43:14 -0500 Subject: [petsc-users] Speed of random generator In-Reply-To: References: Message-ID: <90841E2F-6F0A-4135-9AF1-3272DC541D9A@mcs.anl.gov> > On Jun 19, 2016, at 6:53 AM, Timoth?e Nicolas wrote: > > Hi all, > > I am trying to generate a lot of random numbers to use in a Fokker-Planck simulation. The particles receive random kicks from a normal distribution with a specified statistics. I have some issues here: > > - The manual says to NOT use PetscRandomCreate for Monte Carlo simulations because it wouldn't have the same statistics across processors. I assume it would in principle apply to my Fokker-Planck simulation described above too, right? There are two issues here. 1) if you run in parallel each process has its own random number generator seed and sequence of random numbers (if you don't change the seed then the same random numbers may be generated on all processes, a very bad thing). There is no connection between the seed and the sequences on different processes so does one know that the required statistics between processes is correct? 2) we are not experts at random number generators, we provide PetscRandom for "simple minded" needs of random numbers. Since proper random numbers are needed for your simulation we expect YOU, and not us, to be the experts on random numbers. What we provide for random numbers is likely not suited for your needs. You need to manage your random number processing using something other than what we provide. So find out what the Monte Carlo community does to satisfy their needs and do something similar. Barry Don't use PetscRandomRegister() just use some appropriate random number generator independent of PETSc. > > - If I want to generate the random numbers more carefully, it says I have to use PetscRandomRegister, and to check src/sys/random/impls/rand/rand.c for an example, but src/sys/random does not exist in my distribution (obtained with git). How do I find this? > > - There is a speed issue. On my computer, the generator > is about 10 times slower than the method numpy.random.rand() of python. Is it expected ? This is alleviated by parallelization, but since I moved to FORTRAN from python in hope of accelerating my code, this is too bad. I consider moving to petsc4py, would it be a good choice? We provide our own completely portable random number generator by default, this could be slower than system provided ones. > > Thanks in advance > > Timothee From Sander.Arens at ugent.be Sun Jun 19 16:02:06 2016 From: Sander.Arens at ugent.be (Sander Arens) Date: Sun, 19 Jun 2016 23:02:06 +0200 Subject: [petsc-users] Problem with interpolating projected field of quadratic order In-Reply-To: References: Message-ID: Thanks, Matt. That indeed made the problem for the test dissapear. However, there's still a problem when I try to work with a gmsh mesh. I modified snes/examples/tutorials/ex77 to read in this mesh (it's just a simple bar generated in gmsh) and I used DMPlexReverseCell because the jacobian determinants where negative. Snes doesn't converge and looking for example in the residual function f1_u_3d shows that x and u are not the same at the beginning (which should be though, as the coordinates where projected onto u). Please see the attached files ex77.c, makefile and bar.msh. I then tried working with a displacement field instead of deformation and this seemed to work (because the initial values where just zero), but the directions of the face normals are in the wrong direction because the bar was stretched instead of compressed. Please see the attached files ex77_2.c, makefile_2 and bar.msh. So did I forget something when using a read in mesh or is it something else? Also, /bin/petsc_gen_xdmf.py seemed to fail on the output ex77_2.h5 of make runex77_2_3 (when using ex77_2.c, makefile_2 and bar.msh). Thanks for all the help, Sander On 19 June 2016 at 02:17, Matthew Knepley wrote: > On Sat, Jun 18, 2016 at 12:49 PM, Sander Arens > wrote: > >> 1) Does the test run for you? >> >> >> I ran the tests and they all pass. >> >> 2) If so, then could it be that you assume something about the order of >>> functions? >> >> >> I'm not really sure what you mean with this. >> >> So the values in 'u' are the FEM coefficients for the coordinate function >>> {x, y}. Why are you calling 'x' projected and >>> 'y' interpolated? >>> >> >> No, u is a vector with three fields which are obtained in the following >> way: >> >> 1) Project the coordinates onto field nr 0 so that I have the coordinates >> for all the dofs >> 2) Project the coordinates onto field nr 1, so that I get the coordinates >> at the centroid of the cell >> 3) Project field nr 0 onto field nr 2, so that I get the coordinates at >> the centroid of the cell >> >> I then output the values of the different fields, so that I can compare >> the values of field 1 and 2. >> >> What I would expect is that the values of field 1 and 2 would be the >> same. This is the case for field 0 being P1, but not for P2. >> I also projected the coordinates onto a P2 field in >> snes/examples/tutorials/ex77.c, but this was done using DMPlexCreateBoxMesh >> and gave no problems. >> Maybe it's some assumption on the vertex numbering in >> DMPlexCreateFromCellList or DMPlexCreateFromFile that I'm not aware of? >> >> I hope I made the problem clearer now? >> > > Okay, I see what happened now. It is indeed a shortcoming. The way I have > things setup now, all fields share the quadrature > since that way I can evaluate all fields in the same loop at a quadrature > point. This could of course be changed at some cost. > I have changed your example to run. > > Thanks, > > Matt > > >> Thanks, >> Sander >> >> On 18 June 2016 at 16:33, Matthew Knepley wrote: >> >>> On Sat, Jun 18, 2016 at 9:26 AM, Matthew Knepley >>> wrote: >>> >>>> On Sat, Jun 18, 2016 at 8:56 AM, Sander Arens >>>> wrote: >>>> >>>>> Hello all, >>>>> >>>>> Recently I've been trying to run a fem problem using DMPlex, PetscFE, >>>>> etc. using a mesh created with gmsh. I used DMPlexReverseCell to get rid of >>>>> the negative jacobian determinants. However, I noticed another problem: >>>>> when I projected the coordinates on a quadratic fem-field and interpolated >>>>> them they didn't match the interpolated values of the original coordinate >>>>> field anymore. >>>>> >>>>> I attached a simple test to reproduce this. With linear interpolation >>>>> I see no problem, it's only when I start using quadratic interpolation. >>>>> >>>>> I have no idea why this is giving problems. Am I missing something >>>>> simple here or is this a bug? >>>>> >>>> >>>> Tests for this already exist >>>> >>>> >>>> https://bitbucket.org/petsc/petsc/src/996a00f1a1693e2d85044ed633fe1848cf357f2a/src/dm/impls/plex/examples/tests/ex3.c?at=master&fileviewer=file-view-default >>>> >>>> with run parameters here: >>>> >>>> >>>> https://bitbucket.org/petsc/petsc/src/996a00f1a1693e2d85044ed633fe1848cf357f2a/config/builder.py?at=master&fileviewer=file-view-default#builder.py-58 >>>> >>>> and specifically for P2 triangles >>>> >>>> >>>> https://bitbucket.org/petsc/petsc/src/996a00f1a1693e2d85044ed633fe1848cf357f2a/config/builder.py?at=master&fileviewer=file-view-default#builder.py-72 >>>> >>>> 1) Does the test run for you? >>>> >>>> ./config/builder2.py check src/dm/impls/plex/examples/tests/ex3.c >>>> >>>> 2) If so, then could it be that you assume something about the order of >>>> functions? >>>> >>> >>> I am having a hard time understanding what you are doing here: >>> >>> /* View the projected coordinates field */ >>> ierr = VecGetSubVector(u, fields[0], &subvec);CHKERRQ(ierr); >>> ierr = PetscObjectSetName((PetscObject) subvec, fieldNames[0]);CHKERRQ(ierr); >>> ierr = VecViewFromOptions(subvec, NULL, "-projectedcoordinates_vec_view");CHKERRQ(ierr); >>> ierr = VecRestoreSubVector(u, fields[0], &subvec);CHKERRQ(ierr); >>> >>> /* View the interpolated coordinates field */ >>> ierr = VecGetSubVector(u, fields[1], &subvec);CHKERRQ(ierr); >>> ierr = PetscObjectSetName((PetscObject) subvec, fieldNames[1]);CHKERRQ(ierr); >>> ierr = VecViewFromOptions(subvec, NULL, "-interpolatedcoordinates_vec_view");CHKERRQ(ierr); >>> ierr = VecRestoreSubVector(u, fields[1], &subvec);CHKERRQ(ierr); >>> >>> >>> So the values in 'u' are the FEM coefficients for the coordinate >>> function {x, y}. Why are you calling 'x' projected and >>> 'y' interpolated? >>> >>> Thanks, >>> >>> Matt >>> >>> >>>> Thanks, >>>> >>>> Matt >>>> >>>> >>>>> Thanks, >>>>> Sander >>>>> >>>> >>>> >>>> >>>> -- >>>> What most experimenters take for granted before they begin their >>>> experiments is infinitely more interesting than any results to which their >>>> experiments lead. >>>> -- Norbert Wiener >>>> >>> >>> >>> >>> -- >>> What most experimenters take for granted before they begin their >>> experiments is infinitely more interesting than any results to which their >>> experiments lead. >>> -- Norbert Wiener >>> >> >> > > > -- > What most experimenters take for granted before they begin their > experiments is infinitely more interesting than any results to which their > experiments lead. > -- Norbert Wiener > -------------- next part -------------- An HTML attachment was scrubbed... URL: From Sander.Arens at ugent.be Sun Jun 19 16:03:30 2016 From: Sander.Arens at ugent.be (Sander Arens) Date: Sun, 19 Jun 2016 23:03:30 +0200 Subject: [petsc-users] Problem with interpolating projected field of quadratic order In-Reply-To: References: Message-ID: And the files of course. On 19 June 2016 at 23:02, Sander Arens wrote: > Thanks, Matt. That indeed made the problem for the test dissapear. > > However, there's still a problem when I try to work with a gmsh mesh. > > I modified snes/examples/tutorials/ex77 to read in this mesh (it's just a > simple bar generated in gmsh) and I used DMPlexReverseCell because the > jacobian determinants where negative. Snes doesn't converge and looking for > example in the residual function f1_u_3d shows that x and u are not the > same at the beginning (which should be though, as the coordinates where > projected onto u). Please see the attached files ex77.c, makefile and > bar.msh. > > I then tried working with a displacement field instead of deformation and > this seemed to work (because the initial values where just zero), but the > directions of the face normals are in the wrong direction because the bar > was stretched instead of compressed. Please see the attached files > ex77_2.c, makefile_2 and bar.msh. > > So did I forget something when using a read in mesh or is it something > else? > > Also, /bin/petsc_gen_xdmf.py seemed to fail on the output ex77_2.h5 of > make runex77_2_3 (when using ex77_2.c, makefile_2 and bar.msh). > > Thanks for all the help, > Sander > > On 19 June 2016 at 02:17, Matthew Knepley wrote: > >> On Sat, Jun 18, 2016 at 12:49 PM, Sander Arens >> wrote: >> >>> 1) Does the test run for you? >>> >>> >>> I ran the tests and they all pass. >>> >>> 2) If so, then could it be that you assume something about the order of >>>> functions? >>> >>> >>> I'm not really sure what you mean with this. >>> >>> So the values in 'u' are the FEM coefficients for the coordinate >>>> function {x, y}. Why are you calling 'x' projected and >>>> 'y' interpolated? >>>> >>> >>> No, u is a vector with three fields which are obtained in the following >>> way: >>> >>> 1) Project the coordinates onto field nr 0 so that I have the >>> coordinates for all the dofs >>> 2) Project the coordinates onto field nr 1, so that I get the >>> coordinates at the centroid of the cell >>> 3) Project field nr 0 onto field nr 2, so that I get the coordinates at >>> the centroid of the cell >>> >>> I then output the values of the different fields, so that I can compare >>> the values of field 1 and 2. >>> >>> What I would expect is that the values of field 1 and 2 would be the >>> same. This is the case for field 0 being P1, but not for P2. >>> I also projected the coordinates onto a P2 field in >>> snes/examples/tutorials/ex77.c, but this was done using DMPlexCreateBoxMesh >>> and gave no problems. >>> Maybe it's some assumption on the vertex numbering in >>> DMPlexCreateFromCellList or DMPlexCreateFromFile that I'm not aware of? >>> >>> I hope I made the problem clearer now? >>> >> >> Okay, I see what happened now. It is indeed a shortcoming. The way I have >> things setup now, all fields share the quadrature >> since that way I can evaluate all fields in the same loop at a quadrature >> point. This could of course be changed at some cost. >> I have changed your example to run. >> >> Thanks, >> >> Matt >> >> >>> Thanks, >>> Sander >>> >>> On 18 June 2016 at 16:33, Matthew Knepley wrote: >>> >>>> On Sat, Jun 18, 2016 at 9:26 AM, Matthew Knepley >>>> wrote: >>>> >>>>> On Sat, Jun 18, 2016 at 8:56 AM, Sander Arens >>>>> wrote: >>>>> >>>>>> Hello all, >>>>>> >>>>>> Recently I've been trying to run a fem problem using DMPlex, PetscFE, >>>>>> etc. using a mesh created with gmsh. I used DMPlexReverseCell to get rid of >>>>>> the negative jacobian determinants. However, I noticed another problem: >>>>>> when I projected the coordinates on a quadratic fem-field and interpolated >>>>>> them they didn't match the interpolated values of the original coordinate >>>>>> field anymore. >>>>>> >>>>>> I attached a simple test to reproduce this. With linear interpolation >>>>>> I see no problem, it's only when I start using quadratic interpolation. >>>>>> >>>>>> I have no idea why this is giving problems. Am I missing something >>>>>> simple here or is this a bug? >>>>>> >>>>> >>>>> Tests for this already exist >>>>> >>>>> >>>>> https://bitbucket.org/petsc/petsc/src/996a00f1a1693e2d85044ed633fe1848cf357f2a/src/dm/impls/plex/examples/tests/ex3.c?at=master&fileviewer=file-view-default >>>>> >>>>> with run parameters here: >>>>> >>>>> >>>>> https://bitbucket.org/petsc/petsc/src/996a00f1a1693e2d85044ed633fe1848cf357f2a/config/builder.py?at=master&fileviewer=file-view-default#builder.py-58 >>>>> >>>>> and specifically for P2 triangles >>>>> >>>>> >>>>> https://bitbucket.org/petsc/petsc/src/996a00f1a1693e2d85044ed633fe1848cf357f2a/config/builder.py?at=master&fileviewer=file-view-default#builder.py-72 >>>>> >>>>> 1) Does the test run for you? >>>>> >>>>> ./config/builder2.py check src/dm/impls/plex/examples/tests/ex3.c >>>>> >>>>> 2) If so, then could it be that you assume something about the order >>>>> of functions? >>>>> >>>> >>>> I am having a hard time understanding what you are doing here: >>>> >>>> /* View the projected coordinates field */ >>>> ierr = VecGetSubVector(u, fields[0], &subvec);CHKERRQ(ierr); >>>> ierr = PetscObjectSetName((PetscObject) subvec, fieldNames[0]);CHKERRQ(ierr); >>>> ierr = VecViewFromOptions(subvec, NULL, "-projectedcoordinates_vec_view");CHKERRQ(ierr); >>>> ierr = VecRestoreSubVector(u, fields[0], &subvec);CHKERRQ(ierr); >>>> >>>> /* View the interpolated coordinates field */ >>>> ierr = VecGetSubVector(u, fields[1], &subvec);CHKERRQ(ierr); >>>> ierr = PetscObjectSetName((PetscObject) subvec, fieldNames[1]);CHKERRQ(ierr); >>>> ierr = VecViewFromOptions(subvec, NULL, "-interpolatedcoordinates_vec_view");CHKERRQ(ierr); >>>> ierr = VecRestoreSubVector(u, fields[1], &subvec);CHKERRQ(ierr); >>>> >>>> >>>> So the values in 'u' are the FEM coefficients for the coordinate >>>> function {x, y}. Why are you calling 'x' projected and >>>> 'y' interpolated? >>>> >>>> Thanks, >>>> >>>> Matt >>>> >>>> >>>>> Thanks, >>>>> >>>>> Matt >>>>> >>>>> >>>>>> Thanks, >>>>>> Sander >>>>>> >>>>> >>>>> >>>>> >>>>> -- >>>>> What most experimenters take for granted before they begin their >>>>> experiments is infinitely more interesting than any results to which their >>>>> experiments lead. >>>>> -- Norbert Wiener >>>>> >>>> >>>> >>>> >>>> -- >>>> What most experimenters take for granted before they begin their >>>> experiments is infinitely more interesting than any results to which their >>>> experiments lead. >>>> -- Norbert Wiener >>>> >>> >>> >> >> >> -- >> What most experimenters take for granted before they begin their >> experiments is infinitely more interesting than any results to which their >> experiments lead. >> -- Norbert Wiener >> > > -------------- next part -------------- An HTML attachment was scrubbed... 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Name: ex77_2.c Type: text/x-csrc Size: 33700 bytes Desc: not available URL: From jed at jedbrown.org Sun Jun 19 22:33:07 2016 From: jed at jedbrown.org (Jed Brown) Date: Sun, 19 Jun 2016 21:33:07 -0600 Subject: [petsc-users] MatPermute for MPIBAIJ matrix Error In-Reply-To: <5764CC31.80904@siat.ac.cn> References: <57635E5B.6020404@siat.ac.cn> <03FA8EA8-813E-4BD8-A69F-1E3D3D43B6D3@mcs.anl.gov> <5764C4CA.50708@siat.ac.cn> <87wplnm9h3.fsf@jedbrown.org> <5764CC31.80904@siat.ac.cn> Message-ID: <87twgomt58.fsf@jedbrown.org> Rongliang Chen writes: > Many thanks for your suggestions. We are using a parallel SOR as the > local solver and in the SOR, we want to ignore the nonzeros not on this > thread, but we hope to keep the nonzeros as much as possible, so reduce > the bandwidth is a possible way to keep the nonzeros. Clearly you're asking for a partitioner. But a low-bandwidth ordering makes a really crappy partitioner (it's asymptotically like a 1D partition). If you want a partitioner, I recommend using a partitioner. And, as Barry said, do the partitioning on your mesh instead of redistributing after assembling a matrix. -------------- next part -------------- A non-text attachment was scrubbed... Name: signature.asc Type: application/pgp-signature Size: 818 bytes Desc: not available URL: From mrestelli at gmail.com Mon Jun 20 10:13:22 2016 From: mrestelli at gmail.com (marco restelli) Date: Mon, 20 Jun 2016 17:13:22 +0200 Subject: [petsc-users] Filling a matrix by chunks of nonzero entries Message-ID: Dear all, while assembling a matrix in PETsc we have the following pattern: do i=1,number_of_chunks ! generate a chunk of matrix entries call compute_ith_chunk( i_idx , j_idx , values ) ! insert those entries do j=1,size_of_the_ith_chunk call MatSetValue( mat , i_idx(j),j_idx(j),value(j) , add_values ) enddo enddo The problem is that inserting the elements with MatSetValue seems to have a significant overhead due to memory allocations and deallocations. Is there a way to speed-up this process, preallocating memory? Notice that we know the number of elements that we have to insert for each chunk, but we don't know to which extent they overlap, i.e. we do not know how many nonzero entries will result in the final matrix. Also, the entries do not have a block pattern, so we can not use MatSetValues. Thank you, Marco From knepley at gmail.com Mon Jun 20 11:00:56 2016 From: knepley at gmail.com (Matthew Knepley) Date: Mon, 20 Jun 2016 09:00:56 -0700 Subject: [petsc-users] Filling a matrix by chunks of nonzero entries In-Reply-To: References: Message-ID: On Mon, Jun 20, 2016 at 8:13 AM, marco restelli wrote: > Dear all, > while assembling a matrix in PETsc we have the following pattern: > > > do i=1,number_of_chunks > > ! generate a chunk of matrix entries > call compute_ith_chunk( i_idx , j_idx , values ) > > ! insert those entries > do j=1,size_of_the_ith_chunk > call MatSetValue( mat , i_idx(j),j_idx(j),value(j) , add_values ) > enddo > > enddo > > > The problem is that inserting the elements with MatSetValue seems to > have a significant overhead due to memory allocations and > deallocations. > > Is there a way to speed-up this process, preallocating memory? > > Notice that we know the number of elements that we have to insert for > each chunk, but we don't know to which extent they overlap, i.e. we do > not know how many nonzero entries will result in the final matrix. > > Also, the entries do not have a block pattern, so we can not use > MatSetValues. > Run the whole process once to count the entries, and then insert. This usually has negligible overhead. Matt > Thank you, > Marco > -- What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead. -- Norbert Wiener -------------- next part -------------- An HTML attachment was scrubbed... URL: From mrestelli at gmail.com Mon Jun 20 11:09:14 2016 From: mrestelli at gmail.com (marco restelli) Date: Mon, 20 Jun 2016 18:09:14 +0200 Subject: [petsc-users] Filling a matrix by chunks of nonzero entries In-Reply-To: References: Message-ID: 2016-06-20 18:00 GMT+0200, Matthew Knepley : > On Mon, Jun 20, 2016 at 8:13 AM, marco restelli > wrote: > >> Dear all, >> while assembling a matrix in PETsc we have the following pattern: >> >> >> do i=1,number_of_chunks >> >> ! generate a chunk of matrix entries >> call compute_ith_chunk( i_idx , j_idx , values ) >> >> ! insert those entries >> do j=1,size_of_the_ith_chunk >> call MatSetValue( mat , i_idx(j),j_idx(j),value(j) , add_values ) >> enddo >> >> enddo >> >> >> The problem is that inserting the elements with MatSetValue seems to >> have a significant overhead due to memory allocations and >> deallocations. >> >> Is there a way to speed-up this process, preallocating memory? >> >> Notice that we know the number of elements that we have to insert for >> each chunk, but we don't know to which extent they overlap, i.e. we do >> not know how many nonzero entries will result in the final matrix. >> >> Also, the entries do not have a block pattern, so we can not use >> MatSetValues. >> > > Run the whole process once to count the entries, and then insert. Matt, when you say "insert" do you mean using MatSetValue? That is what we are currently doing, and it seems to have a significant overhead due to memory allocations and deallocations. I know already the number of entries that I am going to insert, what I don't know is the number of nonzeros in the resulting matrix, since my entries might or might not overlap. Counting the number of nonzeros seems to me a nontrivial task, which I would be happy to leave to PETsc. Marco From epscodes at gmail.com Mon Jun 20 11:32:06 2016 From: epscodes at gmail.com (Xiangdong) Date: Mon, 20 Jun 2016 12:32:06 -0400 Subject: [petsc-users] snes_type aspin error Message-ID: Hello everyone, I am trying different snes_type in petsc. The newtonls and nasm all works well. However, when I switched to aspin, I got the error like "No support for this operation for this object type" "Mat type shell". I am using the dmda 3d in petsc 3.6.3. The full error messages are below. Any hint for me to fix this? Thanks. Best, Xiangdong [0]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [0]PETSC ERROR: No support for this operation for this object type [0]PETSC ERROR: Mat type shell [0]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [0]PETSC ERROR: Petsc Release Version 3.6.3, unknown [0]PETSC ERROR: #1 MatZeroEntries() line 5404 in /home/shared/MyLocal_stor/petsc/petsc-dev/src/mat/interface/matrix.c [0]PETSC ERROR: #2 FormJacobianLocal() line 37 in /home/MyCodes/epscprplus/Jacobian.c [0]PETSC ERROR: #3 SNESComputeJacobian_DMDA() line 175 in /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/utils/dmdasnes.c [0]PETSC ERROR: #4 SNESComputeJacobian() line 2232 in /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/interface/snes.c [0]PETSC ERROR: #5 SNESNASMComputeFinalJacobian_Private() line 770 in /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/impls/nasm/nasm.c [0]PETSC ERROR: #6 SNESSolve_NASM() line 888 in /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/impls/nasm/nasm.c [0]PETSC ERROR: #7 SNESSolve() line 3906 in /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/interface/snes.c [0]PETSC ERROR: #8 SNESApplyNPC() line 48 in /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/interface/snespc.c [0]PETSC ERROR: #9 SNESSolve_NEWTONLS() line 173 in /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/impls/ls/ls.c [0]PETSC ERROR: #10 SNESSolve() line 3906 in /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/interface/snes.c [0]PETSC ERROR: #11 main() line 794 in /home/MyCodes/epscprplus/twophaseow.c -------------- next part -------------- An HTML attachment was scrubbed... URL: From stali at geology.wisc.edu Mon Jun 20 12:02:56 2016 From: stali at geology.wisc.edu (Tabrez Ali) Date: Mon, 20 Jun 2016 12:02:56 -0500 Subject: [petsc-users] Filling a matrix by chunks of nonzero entries In-Reply-To: References: Message-ID: <576821C0.6000700@geology.wisc.edu> Just overestimate it. You'll only waste some local memory. T On 06/20/2016 11:09 AM, marco restelli wrote: > 2016-06-20 18:00 GMT+0200, Matthew Knepley : >> On Mon, Jun 20, 2016 at 8:13 AM, marco restelli >> wrote: >> >>> Dear all, >>> while assembling a matrix in PETsc we have the following pattern: >>> >>> >>> do i=1,number_of_chunks >>> >>> ! generate a chunk of matrix entries >>> call compute_ith_chunk( i_idx , j_idx , values ) >>> >>> ! insert those entries >>> do j=1,size_of_the_ith_chunk >>> call MatSetValue( mat , i_idx(j),j_idx(j),value(j) , add_values ) >>> enddo >>> >>> enddo >>> >>> >>> The problem is that inserting the elements with MatSetValue seems to >>> have a significant overhead due to memory allocations and >>> deallocations. >>> >>> Is there a way to speed-up this process, preallocating memory? >>> >>> Notice that we know the number of elements that we have to insert for >>> each chunk, but we don't know to which extent they overlap, i.e. we do >>> not know how many nonzero entries will result in the final matrix. >>> >>> Also, the entries do not have a block pattern, so we can not use >>> MatSetValues. >>> >> Run the whole process once to count the entries, and then insert. > Matt, when you say "insert" do you mean using MatSetValue? That is > what we are currently doing, and it seems to have a significant > overhead due to memory allocations and deallocations. > > I know already the number of entries that I am going to insert, what I > don't know is the number of nonzeros in the resulting matrix, since my > entries might or might not overlap. Counting the number of nonzeros > seems to me a nontrivial task, which I would be happy to leave to > PETsc. > > Marco From knepley at gmail.com Mon Jun 20 11:54:06 2016 From: knepley at gmail.com (Matthew Knepley) Date: Mon, 20 Jun 2016 09:54:06 -0700 Subject: [petsc-users] snes_type aspin error In-Reply-To: References: Message-ID: Can you give us the output of -snes_view? It would help to see how you are setting everything up, or maybe run SNESView() before SNESSolve()? Matt On Mon, Jun 20, 2016 at 9:32 AM, Xiangdong wrote: > Hello everyone, > > I am trying different snes_type in petsc. The newtonls and nasm all works > well. However, when I switched to aspin, I got the error like "No support > for this operation for this object type" "Mat type shell". I am using the > dmda 3d in petsc 3.6.3. The full error messages are below. > > Any hint for me to fix this? Thanks. > > Best, > Xiangdong > > [0]PETSC ERROR: --------------------- Error Message > -------------------------------------------------------------- > [0]PETSC ERROR: No support for this operation for this object type > [0]PETSC ERROR: Mat type shell > [0]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html > for trouble shooting. > [0]PETSC ERROR: Petsc Release Version 3.6.3, unknown > [0]PETSC ERROR: #1 MatZeroEntries() line 5404 in > /home/shared/MyLocal_stor/petsc/petsc-dev/src/mat/interface/matrix.c > [0]PETSC ERROR: #2 FormJacobianLocal() line 37 in > /home/MyCodes/epscprplus/Jacobian.c > [0]PETSC ERROR: #3 SNESComputeJacobian_DMDA() line 175 in > /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/utils/dmdasnes.c > [0]PETSC ERROR: #4 SNESComputeJacobian() line 2232 in > /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/interface/snes.c > [0]PETSC ERROR: #5 SNESNASMComputeFinalJacobian_Private() line 770 in > /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/impls/nasm/nasm.c > [0]PETSC ERROR: #6 SNESSolve_NASM() line 888 in > /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/impls/nasm/nasm.c > [0]PETSC ERROR: #7 SNESSolve() line 3906 in > /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/interface/snes.c > [0]PETSC ERROR: #8 SNESApplyNPC() line 48 in > /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/interface/snespc.c > [0]PETSC ERROR: #9 SNESSolve_NEWTONLS() line 173 in > /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/impls/ls/ls.c > [0]PETSC ERROR: #10 SNESSolve() line 3906 in > /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/interface/snes.c > [0]PETSC ERROR: #11 main() line 794 in > /home/MyCodes/epscprplus/twophaseow.c > > -- What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead. -- Norbert Wiener -------------- next part -------------- An HTML attachment was scrubbed... URL: From bsmith at mcs.anl.gov Mon Jun 20 12:01:15 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Mon, 20 Jun 2016 12:01:15 -0500 Subject: [petsc-users] Filling a matrix by chunks of nonzero entries In-Reply-To: References: Message-ID: > On Jun 20, 2016, at 10:13 AM, marco restelli wrote: > > Dear all, > while assembling a matrix in PETsc we have the following pattern: > > > do i=1,number_of_chunks > > ! generate a chunk of matrix entries > call compute_ith_chunk( i_idx , j_idx , values ) This just generates a "random" bunch of nonzero entries with no structure? What discretization method are you using? > > ! insert those entries > do j=1,size_of_the_ith_chunk > call MatSetValue( mat , i_idx(j),j_idx(j),value(j) , add_values ) > enddo > > enddo > > > The problem is that inserting the elements with MatSetValue seems to > have a significant overhead due to memory allocations and > deallocations. > > Is there a way to speed-up this process, preallocating memory? > > Notice that we know the number of elements that we have to insert for > each chunk, but we don't know to which extent they overlap, i.e. we do > not know how many nonzero entries will result in the final matrix. Take a look at MatPreallocateInitialize() and its other routines it is designed to make it easy to get a good preallocation. Barry > > Also, the entries do not have a block pattern, so we can not use > MatSetValues. > > Thank you, > Marco From mrestelli at gmail.com Mon Jun 20 12:20:48 2016 From: mrestelli at gmail.com (marco restelli) Date: Mon, 20 Jun 2016 19:20:48 +0200 Subject: [petsc-users] Filling a matrix by chunks of nonzero entries In-Reply-To: References: Message-ID: 2016-06-20 19:01 GMT+0200, Barry Smith : > >> On Jun 20, 2016, at 10:13 AM, marco restelli wrote: >> >> Dear all, >> while assembling a matrix in PETsc we have the following pattern: >> >> >> do i=1,number_of_chunks >> >> ! generate a chunk of matrix entries >> call compute_ith_chunk( i_idx , j_idx , values ) > > This just generates a "random" bunch of nonzero entries with no > structure? What discretization method are you using? The matrix comes from the discretization of an integral equation and the structure depends on the convolution kernel. Sure it is not random, but it has a nontrivial pattern which I would prefer to deal with in another part of the code. So, for the matrix assembly my present ansatz is treating the entries as a collection of known but arbitrary values - I understand that I am probably giving up on some optimization, but this might be worth if it helps modularizing the logic of the code. >> ! insert those entries >> do j=1,size_of_the_ith_chunk >> call MatSetValue( mat , i_idx(j),j_idx(j),value(j) , add_values ) >> enddo >> >> enddo >> >> >> The problem is that inserting the elements with MatSetValue seems to >> have a significant overhead due to memory allocations and >> deallocations. > > >> >> Is there a way to speed-up this process, preallocating memory? >> >> Notice that we know the number of elements that we have to insert for >> each chunk, but we don't know to which extent they overlap, i.e. we do >> not know how many nonzero entries will result in the final matrix. > > Take a look at MatPreallocateInitialize() and its other routines it is > designed to make it easy to get a good preallocation. Ah, this looks promising! I will experiment with this. Thank you, Marco From bsmith at mcs.anl.gov Mon Jun 20 12:44:08 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Mon, 20 Jun 2016 12:44:08 -0500 Subject: [petsc-users] Filling a matrix by chunks of nonzero entries In-Reply-To: References: Message-ID: <3AE299AB-C9E2-4857-9F1F-F6EA567094EC@mcs.anl.gov> > On Jun 20, 2016, at 12:20 PM, marco restelli wrote: > > 2016-06-20 19:01 GMT+0200, Barry Smith : >> >>> On Jun 20, 2016, at 10:13 AM, marco restelli wrote: >>> >>> Dear all, >>> while assembling a matrix in PETsc we have the following pattern: >>> >>> >>> do i=1,number_of_chunks >>> >>> ! generate a chunk of matrix entries >>> call compute_ith_chunk( i_idx , j_idx , values ) >> >> This just generates a "random" bunch of nonzero entries with no >> structure? What discretization method are you using? > > The matrix comes from the discretization of an integral equation and > the structure depends on the convolution kernel. Sure it is not > random, but it has a nontrivial pattern which I would prefer to deal > with in another part of the code. So, for the matrix assembly my > present ansatz is treating the entries as a collection of known but > arbitrary values - I understand that I am probably giving up on some > optimization, but this might be worth if it helps modularizing the > logic of the code. If this is coming from a integral equation where normally the matrix would be dense (?) I assume you have some mechanism to "throw away" small values. Likely even then you have many nonzeros per row? Hundreds, thousands? When you have many nonzeros per row and and insert the individual entries "randomly" the performance will be poor because MatSetValues() has to do a binary search on each entry based on the column index to find the correct location to put the value in. Preallocation is crucial but even with preallocation the time for setting all the values if you don't take advantage of some structure will be really slow. Barry > >>> ! insert those entries >>> do j=1,size_of_the_ith_chunk >>> call MatSetValue( mat , i_idx(j),j_idx(j),value(j) , add_values ) >>> enddo >>> >>> enddo >>> >>> >>> The problem is that inserting the elements with MatSetValue seems to >>> have a significant overhead due to memory allocations and >>> deallocations. >> >> >>> >>> Is there a way to speed-up this process, preallocating memory? >>> >>> Notice that we know the number of elements that we have to insert for >>> each chunk, but we don't know to which extent they overlap, i.e. we do >>> not know how many nonzero entries will result in the final matrix. >> >> Take a look at MatPreallocateInitialize() and its other routines it is >> designed to make it easy to get a good preallocation. > > Ah, this looks promising! I will experiment with this. > > Thank you, > Marco From epscodes at gmail.com Mon Jun 20 12:49:26 2016 From: epscodes at gmail.com (Xiangdong) Date: Mon, 20 Jun 2016 13:49:26 -0400 Subject: [petsc-users] snes_type aspin error In-Reply-To: References: Message-ID: Hi Matt, Here is the output of snesview before snessolve. SNES Object: 2 MPI processes type: newtonls SNES has not been set up so information may be incomplete maximum iterations=10, maximum function evaluations=10000 tolerances: relative=0.001, absolute=1e-50, solution=1e-08 total number of linear solver iterations=0 total number of function evaluations=0 norm schedule ALWAYS SNESLineSearch Object: 2 MPI processes type: basic maxstep=1.000000e+08, minlambda=1.000000e-12 tolerances: relative=1.000000e-08, absolute=1.000000e-15, lambda=1.000000e-08 maximum iterations=40 SNES Object: (npc_) 2 MPI processes type: nasm SNES has not been set up so information may be incomplete Nonlinear Additive Schwarz: total subdomain blocks = -2 maximum iterations=10000, maximum function evaluations=10000 tolerances: relative=1e-08, absolute=1e-50, solution=1e-08 total number of linear solver iterations=0 total number of function evaluations=0 norm schedule ALWAYS use the results from previous step as initial guess. the option for switch linesearch method if Newton fails is OFF; SNES Object: 2 MPI processes type: newtonls SNES has not been set up so information may be incomplete maximum iterations=10, maximum function evaluations=10000 tolerances: relative=0.001, absolute=1e-50, solution=1e-08 total number of linear solver iterations=0 total number of function evaluations=0 norm schedule ALWAYS SNESLineSearch Object: 2 MPI processes type: basic maxstep=1.000000e+08, minlambda=1.000000e-12 tolerances: relative=1.000000e-08, absolute=1.000000e-15, lambda=1.000000e-08 maximum iterations=40 SNES Object: (npc_) 2 MPI processes type: nasm SNES has not been set up so information may be incomplete Nonlinear Additive Schwarz: total subdomain blocks = -2 maximum iterations=10000, maximum function evaluations=10000 tolerances: relative=1e-08, absolute=1e-50, solution=1e-08 total number of linear solver iterations=0 total number of function evaluations=0 norm schedule ALWAYS Thanks. Xiangdong On Mon, Jun 20, 2016 at 12:54 PM, Matthew Knepley wrote: > Can you give us the output of -snes_view? It would help to see how you are > setting everything up, or maybe > run SNESView() before SNESSolve()? > > Matt > > On Mon, Jun 20, 2016 at 9:32 AM, Xiangdong wrote: > >> Hello everyone, >> >> I am trying different snes_type in petsc. The newtonls and nasm all works >> well. However, when I switched to aspin, I got the error like "No support >> for this operation for this object type" "Mat type shell". I am using the >> dmda 3d in petsc 3.6.3. The full error messages are below. >> >> Any hint for me to fix this? Thanks. >> >> Best, >> Xiangdong >> >> [0]PETSC ERROR: --------------------- Error Message >> -------------------------------------------------------------- >> [0]PETSC ERROR: No support for this operation for this object type >> [0]PETSC ERROR: Mat type shell >> [0]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html >> for trouble shooting. >> [0]PETSC ERROR: Petsc Release Version 3.6.3, unknown >> [0]PETSC ERROR: #1 MatZeroEntries() line 5404 in >> /home/shared/MyLocal_stor/petsc/petsc-dev/src/mat/interface/matrix.c >> [0]PETSC ERROR: #2 FormJacobianLocal() line 37 in >> /home/MyCodes/epscprplus/Jacobian.c >> [0]PETSC ERROR: #3 SNESComputeJacobian_DMDA() line 175 in >> /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/utils/dmdasnes.c >> [0]PETSC ERROR: #4 SNESComputeJacobian() line 2232 in >> /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/interface/snes.c >> [0]PETSC ERROR: #5 SNESNASMComputeFinalJacobian_Private() line 770 in >> /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/impls/nasm/nasm.c >> [0]PETSC ERROR: #6 SNESSolve_NASM() line 888 in >> /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/impls/nasm/nasm.c >> [0]PETSC ERROR: #7 SNESSolve() line 3906 in >> /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/interface/snes.c >> [0]PETSC ERROR: #8 SNESApplyNPC() line 48 in >> /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/interface/snespc.c >> [0]PETSC ERROR: #9 SNESSolve_NEWTONLS() line 173 in >> /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/impls/ls/ls.c >> [0]PETSC ERROR: #10 SNESSolve() line 3906 in >> /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/interface/snes.c >> [0]PETSC ERROR: #11 main() line 794 in >> /home/MyCodes/epscprplus/twophaseow.c >> >> > > > -- > What most experimenters take for granted before they begin their > experiments is infinitely more interesting than any results to which their > experiments lead. > -- Norbert Wiener > -------------- next part -------------- An HTML attachment was scrubbed... URL: From bsmith at mcs.anl.gov Mon Jun 20 12:02:45 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Mon, 20 Jun 2016 12:02:45 -0500 Subject: [petsc-users] snes_type aspin error In-Reply-To: References: Message-ID: Are you providing a shell matrix to the solver? Barry > On Jun 20, 2016, at 11:32 AM, Xiangdong wrote: > > Hello everyone, > > I am trying different snes_type in petsc. The newtonls and nasm all works well. However, when I switched to aspin, I got the error like "No support for this operation for this object type" "Mat type shell". I am using the dmda 3d in petsc 3.6.3. The full error messages are below. > > Any hint for me to fix this? Thanks. > > Best, > Xiangdong > > [0]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- > [0]PETSC ERROR: No support for this operation for this object type > [0]PETSC ERROR: Mat type shell > [0]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. > [0]PETSC ERROR: Petsc Release Version 3.6.3, unknown > [0]PETSC ERROR: #1 MatZeroEntries() line 5404 in /home/shared/MyLocal_stor/petsc/petsc-dev/src/mat/interface/matrix.c > [0]PETSC ERROR: #2 FormJacobianLocal() line 37 in /home/MyCodes/epscprplus/Jacobian.c > [0]PETSC ERROR: #3 SNESComputeJacobian_DMDA() line 175 in /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/utils/dmdasnes.c > [0]PETSC ERROR: #4 SNESComputeJacobian() line 2232 in /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/interface/snes.c > [0]PETSC ERROR: #5 SNESNASMComputeFinalJacobian_Private() line 770 in /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/impls/nasm/nasm.c > [0]PETSC ERROR: #6 SNESSolve_NASM() line 888 in /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/impls/nasm/nasm.c > [0]PETSC ERROR: #7 SNESSolve() line 3906 in /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/interface/snes.c > [0]PETSC ERROR: #8 SNESApplyNPC() line 48 in /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/interface/snespc.c > [0]PETSC ERROR: #9 SNESSolve_NEWTONLS() line 173 in /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/impls/ls/ls.c > [0]PETSC ERROR: #10 SNESSolve() line 3906 in /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/interface/snes.c > [0]PETSC ERROR: #11 main() line 794 in /home/MyCodes/epscprplus/twophaseow.c > From namu.patel7 at gmail.com Mon Jun 20 19:47:00 2016 From: namu.patel7 at gmail.com (namu patel) Date: Mon, 20 Jun 2016 19:47:00 -0500 Subject: [petsc-users] Trouble installing PETSc on a supercomputer Message-ID: Hello All, I am trying to PETSc 3.5.4 XSEDE Bridges. After running configure command: ./config/configure.py --CC=mpicc --CXX=mpicxx --FC=mpif90 known-mpi-shared-libraries=1 --PETSC_ARCH=$PETSC_ARCH --with-shared-libraries --with-debugging=0 --with-x=0 --download-hypre=1 --download-sundials=1 --download-fblaslapack=1 --with-batch the library prompts me to do as follows: Since your compute nodes require use of a batch system or mpiexec you must: 1) Submit ./conftest-linux-opt to 1 processor of your batch system or system you are cross-compiling for; this will generate the file reconfigure.py 2) Run ./reconfigure-linux-opt.py (to complete the configure process). I submitted the executable ./conftest-linux-opt to the queue using a single process. I expected this script to only run for a few minutes and generate the ./reconfigure-linux-opt.py file, however, it had been running hours without generating the script (and I just terminated the job at that point). I feel like I'm doing something wrong. Does anyone have any suggestions on where I may have gone wrong? Thank you, Namu -------------- next part -------------- An HTML attachment was scrubbed... URL: From epscodes at gmail.com Mon Jun 20 20:06:41 2016 From: epscodes at gmail.com (Xiangdong) Date: Mon, 20 Jun 2016 21:06:41 -0400 Subject: [petsc-users] snes_type aspin error In-Reply-To: References: Message-ID: On Mon, Jun 20, 2016 at 1:02 PM, Barry Smith wrote: > > Are you providing a shell matrix to the solver? > No. The matrix (global Jacobian) is setup by MatSetValuesStencil. It works for the standard newtonls as well as nasm preconditioner. I think the aspin will assemble the new Jacobian for me based on the information of old Jacobian. Do I need to provide something special to use the aspin? Thanks. Best, Xiangdong > > Barry > > > On Jun 20, 2016, at 11:32 AM, Xiangdong wrote: > > > > Hello everyone, > > > > I am trying different snes_type in petsc. The newtonls and nasm all > works well. However, when I switched to aspin, I got the error like "No > support for this operation for this object type" "Mat type shell". I am > using the dmda 3d in petsc 3.6.3. The full error messages are below. > > > > Any hint for me to fix this? Thanks. > > > > Best, > > Xiangdong > > > > [0]PETSC ERROR: --------------------- Error Message > -------------------------------------------------------------- > > [0]PETSC ERROR: No support for this operation for this object type > > [0]PETSC ERROR: Mat type shell > > [0]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html > for trouble shooting. > > [0]PETSC ERROR: Petsc Release Version 3.6.3, unknown > > [0]PETSC ERROR: #1 MatZeroEntries() line 5404 in > /home/shared/MyLocal_stor/petsc/petsc-dev/src/mat/interface/matrix.c > > [0]PETSC ERROR: #2 FormJacobianLocal() line 37 in > /home/MyCodes/epscprplus/Jacobian.c > > [0]PETSC ERROR: #3 SNESComputeJacobian_DMDA() line 175 in > /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/utils/dmdasnes.c > > [0]PETSC ERROR: #4 SNESComputeJacobian() line 2232 in > /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/interface/snes.c > > [0]PETSC ERROR: #5 SNESNASMComputeFinalJacobian_Private() line 770 in > /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/impls/nasm/nasm.c > > [0]PETSC ERROR: #6 SNESSolve_NASM() line 888 in > /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/impls/nasm/nasm.c > > [0]PETSC ERROR: #7 SNESSolve() line 3906 in > /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/interface/snes.c > > [0]PETSC ERROR: #8 SNESApplyNPC() line 48 in > /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/interface/snespc.c > > [0]PETSC ERROR: #9 SNESSolve_NEWTONLS() line 173 in > /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/impls/ls/ls.c > > [0]PETSC ERROR: #10 SNESSolve() line 3906 in > /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/interface/snes.c > > [0]PETSC ERROR: #11 main() line 794 in > /home/MyCodes/epscprplus/twophaseow.c > > > > -------------- next part -------------- An HTML attachment was scrubbed... URL: From epscodes at gmail.com Mon Jun 20 20:09:50 2016 From: epscodes at gmail.com (Xiangdong) Date: Mon, 20 Jun 2016 21:09:50 -0400 Subject: [petsc-users] snes_type aspin error In-Reply-To: References: Message-ID: The snesview output says "SNES has not been set up so information may be incomplete" as well as "Nonlinear Additive Schwarz: total subdomain blocks = -2". Why are the total subdomain blocks negative? Thanks. Xiangdong On Mon, Jun 20, 2016 at 1:49 PM, Xiangdong wrote: > Hi Matt, > > Here is the output of snesview before snessolve. > > SNES Object: 2 MPI processes > type: newtonls > SNES has not been set up so information may be incomplete > maximum iterations=10, maximum function evaluations=10000 > tolerances: relative=0.001, absolute=1e-50, solution=1e-08 > total number of linear solver iterations=0 > total number of function evaluations=0 > norm schedule ALWAYS > SNESLineSearch Object: 2 MPI processes > type: basic > maxstep=1.000000e+08, minlambda=1.000000e-12 > tolerances: relative=1.000000e-08, absolute=1.000000e-15, > lambda=1.000000e-08 > maximum iterations=40 > SNES Object: (npc_) 2 MPI processes > type: nasm > SNES has not been set up so information may be incomplete > Nonlinear Additive Schwarz: total subdomain blocks = -2 > maximum iterations=10000, maximum function evaluations=10000 > tolerances: relative=1e-08, absolute=1e-50, solution=1e-08 > total number of linear solver iterations=0 > total number of function evaluations=0 > norm schedule ALWAYS > use the results from previous step as initial guess. > the option for switch linesearch method if Newton fails is OFF; > SNES Object: 2 MPI processes > type: newtonls > SNES has not been set up so information may be incomplete > maximum iterations=10, maximum function evaluations=10000 > tolerances: relative=0.001, absolute=1e-50, solution=1e-08 > total number of linear solver iterations=0 > total number of function evaluations=0 > norm schedule ALWAYS > SNESLineSearch Object: 2 MPI processes > type: basic > maxstep=1.000000e+08, minlambda=1.000000e-12 > tolerances: relative=1.000000e-08, absolute=1.000000e-15, > lambda=1.000000e-08 > maximum iterations=40 > SNES Object: (npc_) 2 MPI processes > type: nasm > SNES has not been set up so information may be incomplete > Nonlinear Additive Schwarz: total subdomain blocks = -2 > maximum iterations=10000, maximum function evaluations=10000 > tolerances: relative=1e-08, absolute=1e-50, solution=1e-08 > total number of linear solver iterations=0 > total number of function evaluations=0 > norm schedule ALWAYS > > Thanks. > > Xiangdong > > On Mon, Jun 20, 2016 at 12:54 PM, Matthew Knepley > wrote: > >> Can you give us the output of -snes_view? It would help to see how you >> are setting everything up, or maybe >> run SNESView() before SNESSolve()? >> >> Matt >> >> On Mon, Jun 20, 2016 at 9:32 AM, Xiangdong wrote: >> >>> Hello everyone, >>> >>> I am trying different snes_type in petsc. The newtonls and nasm all >>> works well. However, when I switched to aspin, I got the error like "No >>> support for this operation for this object type" "Mat type shell". I am >>> using the dmda 3d in petsc 3.6.3. The full error messages are below. >>> >>> Any hint for me to fix this? Thanks. >>> >>> Best, >>> Xiangdong >>> >>> [0]PETSC ERROR: --------------------- Error Message >>> -------------------------------------------------------------- >>> [0]PETSC ERROR: No support for this operation for this object type >>> [0]PETSC ERROR: Mat type shell >>> [0]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html >>> for trouble shooting. >>> [0]PETSC ERROR: Petsc Release Version 3.6.3, unknown >>> [0]PETSC ERROR: #1 MatZeroEntries() line 5404 in >>> /home/shared/MyLocal_stor/petsc/petsc-dev/src/mat/interface/matrix.c >>> [0]PETSC ERROR: #2 FormJacobianLocal() line 37 in >>> /home/MyCodes/epscprplus/Jacobian.c >>> [0]PETSC ERROR: #3 SNESComputeJacobian_DMDA() line 175 in >>> /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/utils/dmdasnes.c >>> [0]PETSC ERROR: #4 SNESComputeJacobian() line 2232 in >>> /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/interface/snes.c >>> [0]PETSC ERROR: #5 SNESNASMComputeFinalJacobian_Private() line 770 in >>> /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/impls/nasm/nasm.c >>> [0]PETSC ERROR: #6 SNESSolve_NASM() line 888 in >>> /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/impls/nasm/nasm.c >>> [0]PETSC ERROR: #7 SNESSolve() line 3906 in >>> /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/interface/snes.c >>> [0]PETSC ERROR: #8 SNESApplyNPC() line 48 in >>> /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/interface/snespc.c >>> [0]PETSC ERROR: #9 SNESSolve_NEWTONLS() line 173 in >>> /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/impls/ls/ls.c >>> [0]PETSC ERROR: #10 SNESSolve() line 3906 in >>> /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/interface/snes.c >>> [0]PETSC ERROR: #11 main() line 794 in >>> /home/MyCodes/epscprplus/twophaseow.c >>> >>> >> >> >> -- >> What most experimenters take for granted before they begin their >> experiments is infinitely more interesting than any results to which their >> experiments lead. >> -- Norbert Wiener >> > > -------------- next part -------------- An HTML attachment was scrubbed... URL: From rl.chen at siat.ac.cn Mon Jun 20 20:47:26 2016 From: rl.chen at siat.ac.cn (Rongliang Chen) Date: Tue, 21 Jun 2016 09:47:26 +0800 Subject: [petsc-users] MatPermute for MPIBAIJ matrix Error In-Reply-To: <87twgomt58.fsf@jedbrown.org> References: <57635E5B.6020404@siat.ac.cn> <03FA8EA8-813E-4BD8-A69F-1E3D3D43B6D3@mcs.anl.gov> <5764C4CA.50708@siat.ac.cn> <87wplnm9h3.fsf@jedbrown.org> <5764CC31.80904@siat.ac.cn> <87twgomt58.fsf@jedbrown.org> Message-ID: <57689CAE.50907@siat.ac.cn> Hi Jed, Many thanks for your suggestions. Best regards, Rongliang On 06/20/2016 11:33 AM, Jed Brown wrote: > Rongliang Chen writes: > >> Many thanks for your suggestions. We are using a parallel SOR as the >> local solver and in the SOR, we want to ignore the nonzeros not on this >> thread, but we hope to keep the nonzeros as much as possible, so reduce >> the bandwidth is a possible way to keep the nonzeros. > Clearly you're asking for a partitioner. But a low-bandwidth ordering > makes a really crappy partitioner (it's asymptotically like a 1D > partition). If you want a partitioner, I recommend using a partitioner. > And, as Barry said, do the partitioning on your mesh instead of > redistributing after assembling a matrix. From bsmith at mcs.anl.gov Mon Jun 20 20:48:44 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Mon, 20 Jun 2016 20:48:44 -0500 Subject: [petsc-users] Trouble installing PETSc on a supercomputer In-Reply-To: References: Message-ID: <6AEAD7F3-49EC-465C-93EB-A31C23B829F3@mcs.anl.gov> > On Jun 20, 2016, at 7:47 PM, namu patel wrote: > > Hello All, > > I am trying to PETSc 3.5.4 XSEDE Bridges. After running configure command: > > ./config/configure.py --CC=mpicc --CXX=mpicxx --FC=mpif90 known-mpi-shared-libraries=1 --PETSC_ARCH=$PETSC_ARCH --with-shared-libraries --with-debugging=0 --with-x=0 --download-hypre=1 --download-sundials=1 --download-fblaslapack=1 --with-batch > > the library prompts me to do as follows: > > Since your compute nodes require use of a batch system or mpiexec you must: > 1) Submit ./conftest-linux-opt to 1 processor of your batch system or system you are > cross-compiling for; this will generate the file reconfigure.py > 2) Run ./reconfigure-linux-opt.py (to complete the configure process). > > I submitted the executable ./conftest-linux-opt to the queue using a single process. I expected this script to only run for a few minutes and generate the ./reconfigure-linux-opt.py file, however, it had been running hours without generating the script (and I just terminated the job at that point). Yes it should run very quickly and end. Does your batch system have an "interactive mode" where you can submit jobs directly? You could run it in the debugger there and determine why it "hangs". Barry > I feel like I'm doing something wrong. Does anyone have any suggestions on where I may have gone wrong? > > Thank you, > Namu From bsmith at mcs.anl.gov Mon Jun 20 20:51:27 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Mon, 20 Jun 2016 20:51:27 -0500 Subject: [petsc-users] snes_type aspin error In-Reply-To: References: Message-ID: <7977CBE5-33D3-4DA7-82BA-A915F6A2CB26@mcs.anl.gov> Could you reproduce the error with a PETSc example or send us the code? If we can run a code that generates an error then we can debug it and maybe fix it. If we can't run something with the same error it is hard for us to fix it. We'd just be making wild guesses. Barry > On Jun 20, 2016, at 8:06 PM, Xiangdong wrote: > > > > On Mon, Jun 20, 2016 at 1:02 PM, Barry Smith wrote: > > Are you providing a shell matrix to the solver? > > No. The matrix (global Jacobian) is setup by MatSetValuesStencil. It works for the standard newtonls as well as nasm preconditioner. I think the aspin will assemble the new Jacobian for me based on the information of old Jacobian. > > Do I need to provide something special to use the aspin? > > Thanks. > > Best, > Xiangdong > > Barry > > > On Jun 20, 2016, at 11:32 AM, Xiangdong wrote: > > > > Hello everyone, > > > > I am trying different snes_type in petsc. The newtonls and nasm all works well. However, when I switched to aspin, I got the error like "No support for this operation for this object type" "Mat type shell". I am using the dmda 3d in petsc 3.6.3. The full error messages are below. > > > > Any hint for me to fix this? Thanks. > > > > Best, > > Xiangdong > > > > [0]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- > > [0]PETSC ERROR: No support for this operation for this object type > > [0]PETSC ERROR: Mat type shell > > [0]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. > > [0]PETSC ERROR: Petsc Release Version 3.6.3, unknown > > [0]PETSC ERROR: #1 MatZeroEntries() line 5404 in /home/shared/MyLocal_stor/petsc/petsc-dev/src/mat/interface/matrix.c > > [0]PETSC ERROR: #2 FormJacobianLocal() line 37 in /home/MyCodes/epscprplus/Jacobian.c > > [0]PETSC ERROR: #3 SNESComputeJacobian_DMDA() line 175 in /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/utils/dmdasnes.c > > [0]PETSC ERROR: #4 SNESComputeJacobian() line 2232 in /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/interface/snes.c > > [0]PETSC ERROR: #5 SNESNASMComputeFinalJacobian_Private() line 770 in /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/impls/nasm/nasm.c > > [0]PETSC ERROR: #6 SNESSolve_NASM() line 888 in /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/impls/nasm/nasm.c > > [0]PETSC ERROR: #7 SNESSolve() line 3906 in /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/interface/snes.c > > [0]PETSC ERROR: #8 SNESApplyNPC() line 48 in /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/interface/snespc.c > > [0]PETSC ERROR: #9 SNESSolve_NEWTONLS() line 173 in /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/impls/ls/ls.c > > [0]PETSC ERROR: #10 SNESSolve() line 3906 in /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/interface/snes.c > > [0]PETSC ERROR: #11 main() line 794 in /home/MyCodes/epscprplus/twophaseow.c > > > > From Eric.Chamberland at giref.ulaval.ca Mon Jun 20 22:14:02 2016 From: Eric.Chamberland at giref.ulaval.ca (Eric Chamberland) Date: Mon, 20 Jun 2016 23:14:02 -0400 Subject: [petsc-users] On the edge of 2^31 unknowns In-Reply-To: References: <5649F85A.9020807@giref.ulaval.ca> <564A0E55.4010909@giref.ulaval.ca> <869E52FA-3DED-4274-8FBA-C7749F5BBD63@mcs.anl.gov> <564A1FE8.2030404@giref.ulaval.ca> <30507352-1B79-4338-B839-A066159C8CA8@mcs.anl.gov> <576463D5.6060002@giref.ulaval.ca> Message-ID: <5768B0FA.3010507@giref.ulaval.ca> Hi, for sure, valgrind is a reliable tool to find memory corruption... but launching it on a 1k processes jobs sounds like "funny" and unfeasible to me... I really don't know what is the biggest job valgrind ran on out there on any cluster??? Anyway... I looked around into the code for now.. It seems that MatMatMult_MPIAIJ_MPIAIJ switches between 2 different functions: MatMatMultSymbolic_MPIAIJ_MPIAIJ_nonscalable and MatMatMultSymbolic_MPIAIJ_MPIAIJ and that by default, I think the nonscalable version is used... until someone use "-matmatmult_via scalable" option (is there any way I should have found this?) So I have a few questions/remarks: #1- Maybe my problem is just that the non-scalable version is used on a 1.7 billion unknowns....? #2- Is it possible/feasible to do a better choice than to default to the non-scalable version? I would like to have some hints before launching this large calculus again... Thanks, Eric Le 2016-06-17 17:02, Barry Smith a ?crit : > Run with the debug version of the libraries under valgrind http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind to see if any memory corruption issues come up. > > My guess is simply that it has run out of allocatable memory. > > Barry > > > >> On Jun 17, 2016, at 3:55 PM, Eric Chamberland wrote: >> >> Hi, >> >> We got the another run on the cluster with petsc 3.5.4 compiled with 64 bit indices (see end of message for configure options). >> >> This time, the execution terminated with a segmentation violation with the following backtrace: >> >> Thu Jun 16 16:03:08 2016:#000: reqBacktrace(std::string&) >>> /rap/jsf-051-aa/ericc/GIREF/bin/probGD.opt >> Thu Jun 16 16:03:08 2016:#001: attacheDebugger() >>> /rap/jsf-051-aa/ericc/GIREF/bin/probGD.opt >> Thu Jun 16 16:03:08 2016:#002: /rap/jsf-051-aa/ericc/GIREF/lib/libgiref_opt_Util.so(traitementSignal+0x305) [0x2b6c4885a875] >> Thu Jun 16 16:03:08 2016:#003: /lib64/libc.so.6(+0x326a0) [0x2b6c502156a0] >> Thu Jun 16 16:03:08 2016:#004: /software6/mpi/openmpi/1.8.8_intel/lib/libopen-pal.so.6(opal_memory_ptmalloc2_int_malloc+0xee5) [0x2b6c55e99ab5] >> Thu Jun 16 16:03:08 2016:#005: /software6/mpi/openmpi/1.8.8_intel/lib/libopen-pal.so.6(opal_memory_ptmalloc2_malloc+0x58) [0x2b6c55e9b8f8] >> Thu Jun 16 16:03:08 2016:#006: /software6/mpi/openmpi/1.8.8_intel/lib/libopen-pal.so.6(opal_memory_ptmalloc2_memalign+0x3ff) [0x2b6c55e9c50f] >> Thu Jun 16 16:03:08 2016:#007: /software6/libs/petsc/3.5.4_intel_openmpi1.8.8/lib/libpetsc.so.3.5(PetscMallocAlign+0x17) [0x2b6c4a49ecc7] >> Thu Jun 16 16:03:08 2016:#008: /software6/libs/petsc/3.5.4_intel_openmpi1.8.8/lib/libpetsc.so.3.5(MatMatMultSymbolic_MPIAIJ_MPIAIJ+0x37d) [0x2b6c4a915eed] >> Thu Jun 16 16:03:08 2016:#009: /software6/libs/petsc/3.5.4_intel_openmpi1.8.8/lib/libpetsc.so.3.5(MatMatMult_MPIAIJ_MPIAIJ+0x1a3) [0x2b6c4a915713] >> Thu Jun 16 16:03:08 2016:#010: /software6/libs/petsc/3.5.4_intel_openmpi1.8.8/lib/libpetsc.so.3.5(MatMatMult+0x5f4) [0x2b6c4a630f44] >> Thu Jun 16 16:03:08 2016:#011: girefMatMatMult(MatricePETSc const&, MatricePETSc const&, MatricePETSc&, MatReuse) >>> /rap/jsf-051-aa/ericc/GIREF/lib/libgiref_opt_Petsc.so >> >> Now looking at the MatMatMultSymbolic_MPIAIJ_MPIAIJ modifications, since I run in 64 bit indices, there is something either really bad with what we try to do or maybe there is still something in this routine... >> >> What is your advice and how could I retreive more information if I can launch it again? >> >> Is a -malloc_dump or -malloc_log would help or anything else? >> >> (the very same calculus passed with 240M unknowns). >> >> Thanks for your insights! >> >> Eric >> >> here are the configure options: >> static const char *petscconfigureoptions = "PETSC_ARCH=linux-gnu-intel CFLAGS=\"-O3 -xHost -mkl -fPIC -m64 -no-diag-message-catalog\" FFLAGS=\"-O3 -xHost -mkl -fPIC -m64 -no-diag-message-catalog\" --prefix=/sof >> tware6/libs/petsc/3.5.4_intel_openmpi1.8.8 --with-x=0 --with-mpi-compilers=1 --with-mpi-dir=/software6/mpi/openmpi/1.8.8_intel --known-mpi-shared-libraries=1 --with-debugging=no --with-64-bit-indices=1 --with-s >> hared-libraries=1 --with-blas-lapack-dir=/software6/compilers/intel/composer_xe_2013_sp1.0.080/mkl/lib/intel64 --with-scalapack=1 --with-scalapack-include=/software6/compilers/intel/composer_xe_2013_sp1.0.080/m >> kl/include --with-scalapack-lib=\"-lmkl_scalapack_lp64 -lmkl_blacs_openmpi_lp64\" --download-ptscotch=1 --download-superlu_dist=yes --download-parmetis=yes --download-metis=yes --download-hypre=yes"; >> >> >> On 16/11/15 07:12 PM, Barry Smith wrote: >>> I have started a branch with utilities to help catch/handle these integer overflow issues https://bitbucket.org/petsc/petsc/pull-requests/389/add-utilities-for-handling-petscint/diff all suggestions are appreciated >>> >>> Barry >>> >>>> On Nov 16, 2015, at 12:26 PM, Eric Chamberland wrote: >>>> >>>> Barry, >>>> >>>> I can't launch the code again and retrieve other informations, since I am not allowed to do so: the cluster have around ~780 nodes and I got a very special permission to reserve 530 of them... >>>> >>>> So the best I can do is to give you the backtrace PETSc gave me... :/ >>>> (see the first post with the backtrace: http://lists.mcs.anl.gov/pipermail/petsc-users/2015-November/027644.html) >>>> >>>> And until today, all smaller meshes with the same solver succeeded to complete... (I went up to 219 millions of unknowns on 64 nodes). >>>> >>>> I understand then that there could be some use of PetscInt64 in the actual code that would help fix problems like the one I got. I found it is a big challenge to track down all occurrence of this kind of overflow in the code, due to the size of the systems you have to have to reproduce this problem.... >>>> >>>> Eric >>>> >>>> >>>> On 16/11/15 12:40 PM, Barry Smith wrote: >>>>> Eric, >>>>> >>>>> The behavior you get with bizarre integers and a crash is not the behavior we want. We would like to detect these overflows appropriately. If you can track through the error and determine the location where the overflow occurs then we would gladly put in additional checks and use of PetscInt64 to handle these things better. So let us know the exact cause and we'll improve the code. >>>>> >>>>> Barry >>>>> >>>>> >>>>> >>>>>> On Nov 16, 2015, at 11:11 AM, Eric Chamberland wrote: >>>>>> >>>>>> On 16/11/15 10:42 AM, Matthew Knepley wrote: >>>>>>> Sometimes when we do not have exact counts, we need to overestimate >>>>>>> sizes. This is especially true >>>>>>> in sparse MatMat. >>>>>> Ok... so, to be sure, I am correct if I say that recompiling petsc with >>>>>> "--with-64-bit-indices" is the only solution to my problem? >>>>>> >>>>>> I mean, no other fixes exist for this overestimation in a more recent release of petsc, like putting the result in a "long int" instead? >>>>>> >>>>>> Thanks, >>>>>> >>>>>> Eric >>>>>> From bsmith at mcs.anl.gov Mon Jun 20 22:18:55 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Mon, 20 Jun 2016 22:18:55 -0500 Subject: [petsc-users] On the edge of 2^31 unknowns In-Reply-To: <5768B0FA.3010507@giref.ulaval.ca> References: <5649F85A.9020807@giref.ulaval.ca> <564A0E55.4010909@giref.ulaval.ca> <869E52FA-3DED-4274-8FBA-C7749F5BBD63@mcs.anl.gov> <564A1FE8.2030404@giref.ulaval.ca> <30507352-1B79-4338-B839-A066159C8CA8@mcs.anl.gov> <576463D5.6060002@giref.ulaval.ca> <5768B0FA.3010507@giref.ulaval.ca> Message-ID: <8678433B-E069-4158-AC26-A9AE0E0C5996@mcs.anl.gov> valgrind doesn't care how many processes you use it on. Sometimes brute force is the best way to go. Barry > On Jun 20, 2016, at 10:14 PM, Eric Chamberland wrote: > > Hi, > > for sure, valgrind is a reliable tool to find memory corruption... but launching it on a 1k processes jobs sounds like "funny" and unfeasible to me... I really don't know what is the biggest job valgrind ran on out there on any cluster??? > > Anyway... > > I looked around into the code for now.. It seems that MatMatMult_MPIAIJ_MPIAIJ switches between 2 different functions: > > MatMatMultSymbolic_MPIAIJ_MPIAIJ_nonscalable > and > MatMatMultSymbolic_MPIAIJ_MPIAIJ > > and that by default, I think the nonscalable version is used... > > until someone use "-matmatmult_via scalable" option (is there any way I should have found this?) > > So I have a few questions/remarks: > > #1- Maybe my problem is just that the non-scalable version is used on a 1.7 billion unknowns....? > #2- Is it possible/feasible to do a better choice than to default to the non-scalable version? > > I would like to have some hints before launching this large calculus again... > > Thanks, > > Eric > > > Le 2016-06-17 17:02, Barry Smith a ?crit : >> Run with the debug version of the libraries under valgrind http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind to see if any memory corruption issues come up. >> >> My guess is simply that it has run out of allocatable memory. >> >> Barry >> >> >> >>> On Jun 17, 2016, at 3:55 PM, Eric Chamberland wrote: >>> >>> Hi, >>> >>> We got the another run on the cluster with petsc 3.5.4 compiled with 64 bit indices (see end of message for configure options). >>> >>> This time, the execution terminated with a segmentation violation with the following backtrace: >>> >>> Thu Jun 16 16:03:08 2016:#000: reqBacktrace(std::string&) >>> /rap/jsf-051-aa/ericc/GIREF/bin/probGD.opt >>> Thu Jun 16 16:03:08 2016:#001: attacheDebugger() >>> /rap/jsf-051-aa/ericc/GIREF/bin/probGD.opt >>> Thu Jun 16 16:03:08 2016:#002: /rap/jsf-051-aa/ericc/GIREF/lib/libgiref_opt_Util.so(traitementSignal+0x305) [0x2b6c4885a875] >>> Thu Jun 16 16:03:08 2016:#003: /lib64/libc.so.6(+0x326a0) [0x2b6c502156a0] >>> Thu Jun 16 16:03:08 2016:#004: /software6/mpi/openmpi/1.8.8_intel/lib/libopen-pal.so.6(opal_memory_ptmalloc2_int_malloc+0xee5) [0x2b6c55e99ab5] >>> Thu Jun 16 16:03:08 2016:#005: /software6/mpi/openmpi/1.8.8_intel/lib/libopen-pal.so.6(opal_memory_ptmalloc2_malloc+0x58) [0x2b6c55e9b8f8] >>> Thu Jun 16 16:03:08 2016:#006: /software6/mpi/openmpi/1.8.8_intel/lib/libopen-pal.so.6(opal_memory_ptmalloc2_memalign+0x3ff) [0x2b6c55e9c50f] >>> Thu Jun 16 16:03:08 2016:#007: /software6/libs/petsc/3.5.4_intel_openmpi1.8.8/lib/libpetsc.so.3.5(PetscMallocAlign+0x17) [0x2b6c4a49ecc7] >>> Thu Jun 16 16:03:08 2016:#008: /software6/libs/petsc/3.5.4_intel_openmpi1.8.8/lib/libpetsc.so.3.5(MatMatMultSymbolic_MPIAIJ_MPIAIJ+0x37d) [0x2b6c4a915eed] >>> Thu Jun 16 16:03:08 2016:#009: /software6/libs/petsc/3.5.4_intel_openmpi1.8.8/lib/libpetsc.so.3.5(MatMatMult_MPIAIJ_MPIAIJ+0x1a3) [0x2b6c4a915713] >>> Thu Jun 16 16:03:08 2016:#010: /software6/libs/petsc/3.5.4_intel_openmpi1.8.8/lib/libpetsc.so.3.5(MatMatMult+0x5f4) [0x2b6c4a630f44] >>> Thu Jun 16 16:03:08 2016:#011: girefMatMatMult(MatricePETSc const&, MatricePETSc const&, MatricePETSc&, MatReuse) >>> /rap/jsf-051-aa/ericc/GIREF/lib/libgiref_opt_Petsc.so >>> >>> Now looking at the MatMatMultSymbolic_MPIAIJ_MPIAIJ modifications, since I run in 64 bit indices, there is something either really bad with what we try to do or maybe there is still something in this routine... >>> >>> What is your advice and how could I retreive more information if I can launch it again? >>> >>> Is a -malloc_dump or -malloc_log would help or anything else? >>> >>> (the very same calculus passed with 240M unknowns). >>> >>> Thanks for your insights! >>> >>> Eric >>> >>> here are the configure options: >>> static const char *petscconfigureoptions = "PETSC_ARCH=linux-gnu-intel CFLAGS=\"-O3 -xHost -mkl -fPIC -m64 -no-diag-message-catalog\" FFLAGS=\"-O3 -xHost -mkl -fPIC -m64 -no-diag-message-catalog\" --prefix=/sof >>> tware6/libs/petsc/3.5.4_intel_openmpi1.8.8 --with-x=0 --with-mpi-compilers=1 --with-mpi-dir=/software6/mpi/openmpi/1.8.8_intel --known-mpi-shared-libraries=1 --with-debugging=no --with-64-bit-indices=1 --with-s >>> hared-libraries=1 --with-blas-lapack-dir=/software6/compilers/intel/composer_xe_2013_sp1.0.080/mkl/lib/intel64 --with-scalapack=1 --with-scalapack-include=/software6/compilers/intel/composer_xe_2013_sp1.0.080/m >>> kl/include --with-scalapack-lib=\"-lmkl_scalapack_lp64 -lmkl_blacs_openmpi_lp64\" --download-ptscotch=1 --download-superlu_dist=yes --download-parmetis=yes --download-metis=yes --download-hypre=yes"; >>> >>> >>> On 16/11/15 07:12 PM, Barry Smith wrote: >>>> I have started a branch with utilities to help catch/handle these integer overflow issues https://bitbucket.org/petsc/petsc/pull-requests/389/add-utilities-for-handling-petscint/diff all suggestions are appreciated >>>> >>>> Barry >>>> >>>>> On Nov 16, 2015, at 12:26 PM, Eric Chamberland wrote: >>>>> >>>>> Barry, >>>>> >>>>> I can't launch the code again and retrieve other informations, since I am not allowed to do so: the cluster have around ~780 nodes and I got a very special permission to reserve 530 of them... >>>>> >>>>> So the best I can do is to give you the backtrace PETSc gave me... :/ >>>>> (see the first post with the backtrace: http://lists.mcs.anl.gov/pipermail/petsc-users/2015-November/027644.html) >>>>> >>>>> And until today, all smaller meshes with the same solver succeeded to complete... (I went up to 219 millions of unknowns on 64 nodes). >>>>> >>>>> I understand then that there could be some use of PetscInt64 in the actual code that would help fix problems like the one I got. I found it is a big challenge to track down all occurrence of this kind of overflow in the code, due to the size of the systems you have to have to reproduce this problem.... >>>>> >>>>> Eric >>>>> >>>>> >>>>> On 16/11/15 12:40 PM, Barry Smith wrote: >>>>>> Eric, >>>>>> >>>>>> The behavior you get with bizarre integers and a crash is not the behavior we want. We would like to detect these overflows appropriately. If you can track through the error and determine the location where the overflow occurs then we would gladly put in additional checks and use of PetscInt64 to handle these things better. So let us know the exact cause and we'll improve the code. >>>>>> >>>>>> Barry >>>>>> >>>>>> >>>>>> >>>>>>> On Nov 16, 2015, at 11:11 AM, Eric Chamberland wrote: >>>>>>> >>>>>>> On 16/11/15 10:42 AM, Matthew Knepley wrote: >>>>>>>> Sometimes when we do not have exact counts, we need to overestimate >>>>>>>> sizes. This is especially true >>>>>>>> in sparse MatMat. >>>>>>> Ok... so, to be sure, I am correct if I say that recompiling petsc with >>>>>>> "--with-64-bit-indices" is the only solution to my problem? >>>>>>> >>>>>>> I mean, no other fixes exist for this overestimation in a more recent release of petsc, like putting the result in a "long int" instead? >>>>>>> >>>>>>> Thanks, >>>>>>> >>>>>>> Eric >>>>>>> > From Eric.Chamberland at giref.ulaval.ca Mon Jun 20 22:32:17 2016 From: Eric.Chamberland at giref.ulaval.ca (Eric Chamberland) Date: Mon, 20 Jun 2016 23:32:17 -0400 Subject: [petsc-users] On the edge of 2^31 unknowns In-Reply-To: <8678433B-E069-4158-AC26-A9AE0E0C5996@mcs.anl.gov> References: <5649F85A.9020807@giref.ulaval.ca> <564A0E55.4010909@giref.ulaval.ca> <869E52FA-3DED-4274-8FBA-C7749F5BBD63@mcs.anl.gov> <564A1FE8.2030404@giref.ulaval.ca> <30507352-1B79-4338-B839-A066159C8CA8@mcs.anl.gov> <576463D5.6060002@giref.ulaval.ca> <5768B0FA.3010507@giref.ulaval.ca> <8678433B-E069-4158-AC26-A9AE0E0C5996@mcs.anl.gov> Message-ID: <5768B541.9000604@giref.ulaval.ca> ok, but what about -matmatmult_via scalable? Eric Le 2016-06-20 23:18, Barry Smith a ?crit : > valgrind doesn't care how many processes you use it on. Sometimes brute force is the best way to go. > > Barry > >> On Jun 20, 2016, at 10:14 PM, Eric Chamberland wrote: >> >> Hi, >> >> for sure, valgrind is a reliable tool to find memory corruption... but launching it on a 1k processes jobs sounds like "funny" and unfeasible to me... I really don't know what is the biggest job valgrind ran on out there on any cluster??? >> >> Anyway... >> >> I looked around into the code for now.. It seems that MatMatMult_MPIAIJ_MPIAIJ switches between 2 different functions: >> >> MatMatMultSymbolic_MPIAIJ_MPIAIJ_nonscalable >> and >> MatMatMultSymbolic_MPIAIJ_MPIAIJ >> >> and that by default, I think the nonscalable version is used... >> >> until someone use "-matmatmult_via scalable" option (is there any way I should have found this?) >> >> So I have a few questions/remarks: >> >> #1- Maybe my problem is just that the non-scalable version is used on a 1.7 billion unknowns....? >> #2- Is it possible/feasible to do a better choice than to default to the non-scalable version? >> >> I would like to have some hints before launching this large calculus again... >> >> Thanks, >> >> Eric >> >> >> Le 2016-06-17 17:02, Barry Smith a ?crit : >>> Run with the debug version of the libraries under valgrind http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind to see if any memory corruption issues come up. >>> >>> My guess is simply that it has run out of allocatable memory. >>> >>> Barry >>> >>> >>> >>>> On Jun 17, 2016, at 3:55 PM, Eric Chamberland wrote: >>>> >>>> Hi, >>>> >>>> We got the another run on the cluster with petsc 3.5.4 compiled with 64 bit indices (see end of message for configure options). >>>> >>>> This time, the execution terminated with a segmentation violation with the following backtrace: >>>> >>>> Thu Jun 16 16:03:08 2016:#000: reqBacktrace(std::string&) >>> /rap/jsf-051-aa/ericc/GIREF/bin/probGD.opt >>>> Thu Jun 16 16:03:08 2016:#001: attacheDebugger() >>> /rap/jsf-051-aa/ericc/GIREF/bin/probGD.opt >>>> Thu Jun 16 16:03:08 2016:#002: /rap/jsf-051-aa/ericc/GIREF/lib/libgiref_opt_Util.so(traitementSignal+0x305) [0x2b6c4885a875] >>>> Thu Jun 16 16:03:08 2016:#003: /lib64/libc.so.6(+0x326a0) [0x2b6c502156a0] >>>> Thu Jun 16 16:03:08 2016:#004: /software6/mpi/openmpi/1.8.8_intel/lib/libopen-pal.so.6(opal_memory_ptmalloc2_int_malloc+0xee5) [0x2b6c55e99ab5] >>>> Thu Jun 16 16:03:08 2016:#005: /software6/mpi/openmpi/1.8.8_intel/lib/libopen-pal.so.6(opal_memory_ptmalloc2_malloc+0x58) [0x2b6c55e9b8f8] >>>> Thu Jun 16 16:03:08 2016:#006: /software6/mpi/openmpi/1.8.8_intel/lib/libopen-pal.so.6(opal_memory_ptmalloc2_memalign+0x3ff) [0x2b6c55e9c50f] >>>> Thu Jun 16 16:03:08 2016:#007: /software6/libs/petsc/3.5.4_intel_openmpi1.8.8/lib/libpetsc.so.3.5(PetscMallocAlign+0x17) [0x2b6c4a49ecc7] >>>> Thu Jun 16 16:03:08 2016:#008: /software6/libs/petsc/3.5.4_intel_openmpi1.8.8/lib/libpetsc.so.3.5(MatMatMultSymbolic_MPIAIJ_MPIAIJ+0x37d) [0x2b6c4a915eed] >>>> Thu Jun 16 16:03:08 2016:#009: /software6/libs/petsc/3.5.4_intel_openmpi1.8.8/lib/libpetsc.so.3.5(MatMatMult_MPIAIJ_MPIAIJ+0x1a3) [0x2b6c4a915713] >>>> Thu Jun 16 16:03:08 2016:#010: /software6/libs/petsc/3.5.4_intel_openmpi1.8.8/lib/libpetsc.so.3.5(MatMatMult+0x5f4) [0x2b6c4a630f44] >>>> Thu Jun 16 16:03:08 2016:#011: girefMatMatMult(MatricePETSc const&, MatricePETSc const&, MatricePETSc&, MatReuse) >>> /rap/jsf-051-aa/ericc/GIREF/lib/libgiref_opt_Petsc.so >>>> >>>> Now looking at the MatMatMultSymbolic_MPIAIJ_MPIAIJ modifications, since I run in 64 bit indices, there is something either really bad with what we try to do or maybe there is still something in this routine... >>>> >>>> What is your advice and how could I retreive more information if I can launch it again? >>>> >>>> Is a -malloc_dump or -malloc_log would help or anything else? >>>> >>>> (the very same calculus passed with 240M unknowns). >>>> >>>> Thanks for your insights! >>>> >>>> Eric >>>> >>>> here are the configure options: >>>> static const char *petscconfigureoptions = "PETSC_ARCH=linux-gnu-intel CFLAGS=\"-O3 -xHost -mkl -fPIC -m64 -no-diag-message-catalog\" FFLAGS=\"-O3 -xHost -mkl -fPIC -m64 -no-diag-message-catalog\" --prefix=/sof >>>> tware6/libs/petsc/3.5.4_intel_openmpi1.8.8 --with-x=0 --with-mpi-compilers=1 --with-mpi-dir=/software6/mpi/openmpi/1.8.8_intel --known-mpi-shared-libraries=1 --with-debugging=no --with-64-bit-indices=1 --with-s >>>> hared-libraries=1 --with-blas-lapack-dir=/software6/compilers/intel/composer_xe_2013_sp1.0.080/mkl/lib/intel64 --with-scalapack=1 --with-scalapack-include=/software6/compilers/intel/composer_xe_2013_sp1.0.080/m >>>> kl/include --with-scalapack-lib=\"-lmkl_scalapack_lp64 -lmkl_blacs_openmpi_lp64\" --download-ptscotch=1 --download-superlu_dist=yes --download-parmetis=yes --download-metis=yes --download-hypre=yes"; >>>> >>>> >>>> On 16/11/15 07:12 PM, Barry Smith wrote: >>>>> I have started a branch with utilities to help catch/handle these integer overflow issues https://bitbucket.org/petsc/petsc/pull-requests/389/add-utilities-for-handling-petscint/diff all suggestions are appreciated >>>>> >>>>> Barry >>>>> >>>>>> On Nov 16, 2015, at 12:26 PM, Eric Chamberland wrote: >>>>>> >>>>>> Barry, >>>>>> >>>>>> I can't launch the code again and retrieve other informations, since I am not allowed to do so: the cluster have around ~780 nodes and I got a very special permission to reserve 530 of them... >>>>>> >>>>>> So the best I can do is to give you the backtrace PETSc gave me... :/ >>>>>> (see the first post with the backtrace: http://lists.mcs.anl.gov/pipermail/petsc-users/2015-November/027644.html) >>>>>> >>>>>> And until today, all smaller meshes with the same solver succeeded to complete... (I went up to 219 millions of unknowns on 64 nodes). >>>>>> >>>>>> I understand then that there could be some use of PetscInt64 in the actual code that would help fix problems like the one I got. I found it is a big challenge to track down all occurrence of this kind of overflow in the code, due to the size of the systems you have to have to reproduce this problem.... >>>>>> >>>>>> Eric >>>>>> >>>>>> >>>>>> On 16/11/15 12:40 PM, Barry Smith wrote: >>>>>>> Eric, >>>>>>> >>>>>>> The behavior you get with bizarre integers and a crash is not the behavior we want. We would like to detect these overflows appropriately. If you can track through the error and determine the location where the overflow occurs then we would gladly put in additional checks and use of PetscInt64 to handle these things better. So let us know the exact cause and we'll improve the code. >>>>>>> >>>>>>> Barry >>>>>>> >>>>>>> >>>>>>> >>>>>>>> On Nov 16, 2015, at 11:11 AM, Eric Chamberland wrote: >>>>>>>> >>>>>>>> On 16/11/15 10:42 AM, Matthew Knepley wrote: >>>>>>>>> Sometimes when we do not have exact counts, we need to overestimate >>>>>>>>> sizes. This is especially true >>>>>>>>> in sparse MatMat. >>>>>>>> Ok... so, to be sure, I am correct if I say that recompiling petsc with >>>>>>>> "--with-64-bit-indices" is the only solution to my problem? >>>>>>>> >>>>>>>> I mean, no other fixes exist for this overestimation in a more recent release of petsc, like putting the result in a "long int" instead? >>>>>>>> >>>>>>>> Thanks, >>>>>>>> >>>>>>>> Eric >>>>>>>> From bsmith at mcs.anl.gov Mon Jun 20 22:37:12 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Mon, 20 Jun 2016 22:37:12 -0500 Subject: [petsc-users] On the edge of 2^31 unknowns In-Reply-To: <5768B541.9000604@giref.ulaval.ca> References: <5649F85A.9020807@giref.ulaval.ca> <564A0E55.4010909@giref.ulaval.ca> <869E52FA-3DED-4274-8FBA-C7749F5BBD63@mcs.anl.gov> <564A1FE8.2030404@giref.ulaval.ca> <30507352-1B79-4338-B839-A066159C8CA8@mcs.anl.gov> <576463D5.6060002@giref.ulaval.ca> <5768B0FA.3010507@giref.ulaval.ca> <8678433B-E069-4158-AC26-A9AE0E0C5996@mcs.anl.gov> <5768B541.9000604@giref.ulaval.ca> Message-ID: > On Jun 20, 2016, at 10:32 PM, Eric Chamberland wrote: > > ok, but what about -matmatmult_via scalable? Both should work. It just may be one is faster or slower than the other depending on the problem size. Barry > > Eric > > Le 2016-06-20 23:18, Barry Smith a ?crit : >> valgrind doesn't care how many processes you use it on. Sometimes brute force is the best way to go. >> >> Barry >> >>> On Jun 20, 2016, at 10:14 PM, Eric Chamberland wrote: >>> >>> Hi, >>> >>> for sure, valgrind is a reliable tool to find memory corruption... but launching it on a 1k processes jobs sounds like "funny" and unfeasible to me... I really don't know what is the biggest job valgrind ran on out there on any cluster??? >>> >>> Anyway... >>> >>> I looked around into the code for now.. It seems that MatMatMult_MPIAIJ_MPIAIJ switches between 2 different functions: >>> >>> MatMatMultSymbolic_MPIAIJ_MPIAIJ_nonscalable >>> and >>> MatMatMultSymbolic_MPIAIJ_MPIAIJ >>> >>> and that by default, I think the nonscalable version is used... >>> >>> until someone use "-matmatmult_via scalable" option (is there any way I should have found this?) >>> >>> So I have a few questions/remarks: >>> >>> #1- Maybe my problem is just that the non-scalable version is used on a 1.7 billion unknowns....? >>> #2- Is it possible/feasible to do a better choice than to default to the non-scalable version? >>> >>> I would like to have some hints before launching this large calculus again... >>> >>> Thanks, >>> >>> Eric >>> >>> >>> Le 2016-06-17 17:02, Barry Smith a ?crit : >>>> Run with the debug version of the libraries under valgrind http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind to see if any memory corruption issues come up. >>>> >>>> My guess is simply that it has run out of allocatable memory. >>>> >>>> Barry >>>> >>>> >>>> >>>>> On Jun 17, 2016, at 3:55 PM, Eric Chamberland wrote: >>>>> >>>>> Hi, >>>>> >>>>> We got the another run on the cluster with petsc 3.5.4 compiled with 64 bit indices (see end of message for configure options). >>>>> >>>>> This time, the execution terminated with a segmentation violation with the following backtrace: >>>>> >>>>> Thu Jun 16 16:03:08 2016:#000: reqBacktrace(std::string&) >>> /rap/jsf-051-aa/ericc/GIREF/bin/probGD.opt >>>>> Thu Jun 16 16:03:08 2016:#001: attacheDebugger() >>> /rap/jsf-051-aa/ericc/GIREF/bin/probGD.opt >>>>> Thu Jun 16 16:03:08 2016:#002: /rap/jsf-051-aa/ericc/GIREF/lib/libgiref_opt_Util.so(traitementSignal+0x305) [0x2b6c4885a875] >>>>> Thu Jun 16 16:03:08 2016:#003: /lib64/libc.so.6(+0x326a0) [0x2b6c502156a0] >>>>> Thu Jun 16 16:03:08 2016:#004: /software6/mpi/openmpi/1.8.8_intel/lib/libopen-pal.so.6(opal_memory_ptmalloc2_int_malloc+0xee5) [0x2b6c55e99ab5] >>>>> Thu Jun 16 16:03:08 2016:#005: /software6/mpi/openmpi/1.8.8_intel/lib/libopen-pal.so.6(opal_memory_ptmalloc2_malloc+0x58) [0x2b6c55e9b8f8] >>>>> Thu Jun 16 16:03:08 2016:#006: /software6/mpi/openmpi/1.8.8_intel/lib/libopen-pal.so.6(opal_memory_ptmalloc2_memalign+0x3ff) [0x2b6c55e9c50f] >>>>> Thu Jun 16 16:03:08 2016:#007: /software6/libs/petsc/3.5.4_intel_openmpi1.8.8/lib/libpetsc.so.3.5(PetscMallocAlign+0x17) [0x2b6c4a49ecc7] >>>>> Thu Jun 16 16:03:08 2016:#008: /software6/libs/petsc/3.5.4_intel_openmpi1.8.8/lib/libpetsc.so.3.5(MatMatMultSymbolic_MPIAIJ_MPIAIJ+0x37d) [0x2b6c4a915eed] >>>>> Thu Jun 16 16:03:08 2016:#009: /software6/libs/petsc/3.5.4_intel_openmpi1.8.8/lib/libpetsc.so.3.5(MatMatMult_MPIAIJ_MPIAIJ+0x1a3) [0x2b6c4a915713] >>>>> Thu Jun 16 16:03:08 2016:#010: /software6/libs/petsc/3.5.4_intel_openmpi1.8.8/lib/libpetsc.so.3.5(MatMatMult+0x5f4) [0x2b6c4a630f44] >>>>> Thu Jun 16 16:03:08 2016:#011: girefMatMatMult(MatricePETSc const&, MatricePETSc const&, MatricePETSc&, MatReuse) >>> /rap/jsf-051-aa/ericc/GIREF/lib/libgiref_opt_Petsc.so >>>>> >>>>> Now looking at the MatMatMultSymbolic_MPIAIJ_MPIAIJ modifications, since I run in 64 bit indices, there is something either really bad with what we try to do or maybe there is still something in this routine... >>>>> >>>>> What is your advice and how could I retreive more information if I can launch it again? >>>>> >>>>> Is a -malloc_dump or -malloc_log would help or anything else? >>>>> >>>>> (the very same calculus passed with 240M unknowns). >>>>> >>>>> Thanks for your insights! >>>>> >>>>> Eric >>>>> >>>>> here are the configure options: >>>>> static const char *petscconfigureoptions = "PETSC_ARCH=linux-gnu-intel CFLAGS=\"-O3 -xHost -mkl -fPIC -m64 -no-diag-message-catalog\" FFLAGS=\"-O3 -xHost -mkl -fPIC -m64 -no-diag-message-catalog\" --prefix=/sof >>>>> tware6/libs/petsc/3.5.4_intel_openmpi1.8.8 --with-x=0 --with-mpi-compilers=1 --with-mpi-dir=/software6/mpi/openmpi/1.8.8_intel --known-mpi-shared-libraries=1 --with-debugging=no --with-64-bit-indices=1 --with-s >>>>> hared-libraries=1 --with-blas-lapack-dir=/software6/compilers/intel/composer_xe_2013_sp1.0.080/mkl/lib/intel64 --with-scalapack=1 --with-scalapack-include=/software6/compilers/intel/composer_xe_2013_sp1.0.080/m >>>>> kl/include --with-scalapack-lib=\"-lmkl_scalapack_lp64 -lmkl_blacs_openmpi_lp64\" --download-ptscotch=1 --download-superlu_dist=yes --download-parmetis=yes --download-metis=yes --download-hypre=yes"; >>>>> >>>>> >>>>> On 16/11/15 07:12 PM, Barry Smith wrote: >>>>>> I have started a branch with utilities to help catch/handle these integer overflow issues https://bitbucket.org/petsc/petsc/pull-requests/389/add-utilities-for-handling-petscint/diff all suggestions are appreciated >>>>>> >>>>>> Barry >>>>>> >>>>>>> On Nov 16, 2015, at 12:26 PM, Eric Chamberland wrote: >>>>>>> >>>>>>> Barry, >>>>>>> >>>>>>> I can't launch the code again and retrieve other informations, since I am not allowed to do so: the cluster have around ~780 nodes and I got a very special permission to reserve 530 of them... >>>>>>> >>>>>>> So the best I can do is to give you the backtrace PETSc gave me... :/ >>>>>>> (see the first post with the backtrace: http://lists.mcs.anl.gov/pipermail/petsc-users/2015-November/027644.html) >>>>>>> >>>>>>> And until today, all smaller meshes with the same solver succeeded to complete... (I went up to 219 millions of unknowns on 64 nodes). >>>>>>> >>>>>>> I understand then that there could be some use of PetscInt64 in the actual code that would help fix problems like the one I got. I found it is a big challenge to track down all occurrence of this kind of overflow in the code, due to the size of the systems you have to have to reproduce this problem.... >>>>>>> >>>>>>> Eric >>>>>>> >>>>>>> >>>>>>> On 16/11/15 12:40 PM, Barry Smith wrote: >>>>>>>> Eric, >>>>>>>> >>>>>>>> The behavior you get with bizarre integers and a crash is not the behavior we want. We would like to detect these overflows appropriately. If you can track through the error and determine the location where the overflow occurs then we would gladly put in additional checks and use of PetscInt64 to handle these things better. So let us know the exact cause and we'll improve the code. >>>>>>>> >>>>>>>> Barry >>>>>>>> >>>>>>>> >>>>>>>> >>>>>>>>> On Nov 16, 2015, at 11:11 AM, Eric Chamberland wrote: >>>>>>>>> >>>>>>>>> On 16/11/15 10:42 AM, Matthew Knepley wrote: >>>>>>>>>> Sometimes when we do not have exact counts, we need to overestimate >>>>>>>>>> sizes. This is especially true >>>>>>>>>> in sparse MatMat. >>>>>>>>> Ok... so, to be sure, I am correct if I say that recompiling petsc with >>>>>>>>> "--with-64-bit-indices" is the only solution to my problem? >>>>>>>>> >>>>>>>>> I mean, no other fixes exist for this overestimation in a more recent release of petsc, like putting the result in a "long int" instead? >>>>>>>>> >>>>>>>>> Thanks, >>>>>>>>> >>>>>>>>> Eric >>>>>>>>> > From Eric.Chamberland at giref.ulaval.ca Mon Jun 20 22:49:56 2016 From: Eric.Chamberland at giref.ulaval.ca (Eric Chamberland) Date: Mon, 20 Jun 2016 23:49:56 -0400 Subject: [petsc-users] On the edge of 2^31 unknowns In-Reply-To: References: <5649F85A.9020807@giref.ulaval.ca> <564A0E55.4010909@giref.ulaval.ca> <869E52FA-3DED-4274-8FBA-C7749F5BBD63@mcs.anl.gov> <564A1FE8.2030404@giref.ulaval.ca> <30507352-1B79-4338-B839-A066159C8CA8@mcs.anl.gov> <576463D5.6060002@giref.ulaval.ca> <5768B0FA.3010507@giref.ulaval.ca> <8678433B-E069-4158-AC26-A9AE0E0C5996@mcs.anl.gov> <5768B541.9000604@giref.ulaval.ca> Message-ID: <5768B964.9060109@giref.ulaval.ca> Le 2016-06-20 23:37, Barry Smith a ?crit : >> On Jun 20, 2016, at 10:32 PM, Eric Chamberland wrote: >> >> ok, but what about -matmatmult_via scalable? > Both should work. It just may be one is faster or slower than the other depending on the problem size. ok, digging further, I found this into blaming the code: 0fc8cf34 (Hong Zhang 2013-06-27 14:04:58 -0500 696) /* same as MatMatMultSymbolic_MPIAIJ_MPIAIJ_nonscalable(), except using LLCondensed to avoid O(BN) memory requirement */ But the commit comment says: ... rename MatMatMultSymbolic_MPIAIJ_MPIAIJ -> MatMatMultSymbolic_MPIAIJ_MPIAIJ_nonscalable (non-default) But it *is* the default... since another commit: commit 0d3441ae8a080c728abf17e90308c510e39e951b Author: Hong Zhang Date: Mon Aug 24 16:40:35 2015 -0500 add MatPtAPxxx_MPIAIJ_MPIAIJ_new which changed the behaviour programmed in 0fc8cf34. Is it normal? Eric From hong at aspiritech.org Tue Jun 21 08:36:07 2016 From: hong at aspiritech.org (hong at aspiritech.org) Date: Tue, 21 Jun 2016 08:36:07 -0500 Subject: [petsc-users] On the edge of 2^31 unknowns In-Reply-To: <5768B964.9060109@giref.ulaval.ca> References: <5649F85A.9020807@giref.ulaval.ca> <564A0E55.4010909@giref.ulaval.ca> <869E52FA-3DED-4274-8FBA-C7749F5BBD63@mcs.anl.gov> <564A1FE8.2030404@giref.ulaval.ca> <30507352-1B79-4338-B839-A066159C8CA8@mcs.anl.gov> <576463D5.6060002@giref.ulaval.ca> <5768B0FA.3010507@giref.ulaval.ca> <8678433B-E069-4158-AC26-A9AE0E0C5996@mcs.anl.gov> <5768B541.9000604@giref.ulaval.ca> <5768B964.9060109@giref.ulaval.ca> Message-ID: Eric: The nonscalable implementation is robust, and faster for small to medium size problems, thus we set it as the default. You can switch with option '-matmatmult_via scalable', which requires estimate of nonzeros A*B. The estimate was buggy, not well-tested. If you encounter any problem, let us know. Hong On Mon, Jun 20, 2016 at 10:49 PM, Eric Chamberland < Eric.Chamberland at giref.ulaval.ca> wrote: > > > Le 2016-06-20 23:37, Barry Smith a ?crit : > >> On Jun 20, 2016, at 10:32 PM, Eric Chamberland < >>> Eric.Chamberland at giref.ulaval.ca> wrote: >>> >>> ok, but what about -matmatmult_via scalable? >>> >> Both should work. It just may be one is faster or slower than the >> other depending on the problem size. >> > ok, digging further, I found this into blaming the code: > > 0fc8cf34 (Hong Zhang 2013-06-27 14:04:58 -0500 696) /* same as > MatMatMultSymbolic_MPIAIJ_MPIAIJ_nonscalable(), except using LLCondensed to > avoid O(BN) memory requirement */ > > But the commit comment says: > ... > rename MatMatMultSymbolic_MPIAIJ_MPIAIJ -> > MatMatMultSymbolic_MPIAIJ_MPIAIJ_nonscalable (non-default) > > But it *is* the default... since another commit: > > commit 0d3441ae8a080c728abf17e90308c510e39e951b > Author: Hong Zhang > Date: Mon Aug 24 16:40:35 2015 -0500 > > add MatPtAPxxx_MPIAIJ_MPIAIJ_new > > which changed the behaviour programmed in 0fc8cf34. Is it normal? > > Eric > > > -------------- next part -------------- An HTML attachment was scrubbed... URL: From Eric.Chamberland at giref.ulaval.ca Tue Jun 21 15:20:24 2016 From: Eric.Chamberland at giref.ulaval.ca (Eric Chamberland) Date: Tue, 21 Jun 2016 16:20:24 -0400 Subject: [petsc-users] On the edge of 2^31 unknowns In-Reply-To: References: <5649F85A.9020807@giref.ulaval.ca> <564A0E55.4010909@giref.ulaval.ca> <869E52FA-3DED-4274-8FBA-C7749F5BBD63@mcs.anl.gov> <564A1FE8.2030404@giref.ulaval.ca> <30507352-1B79-4338-B839-A066159C8CA8@mcs.anl.gov> <576463D5.6060002@giref.ulaval.ca> <5768B0FA.3010507@giref.ulaval.ca> <8678433B-E069-4158-AC26-A9AE0E0C5996@mcs.anl.gov> <5768B541.9000604@giref.ulaval.ca> <5768B964.9060109@giref.ulaval.ca> Message-ID: <5769A188.5020705@giref.ulaval.ca> Hi Hong, thanks... but I just realized, that into petsc 3.5.4 (which I used for this calculus) the default *was* the scalable version... :/ So I prepared a patch (see attachment) to help debug, but it will be based on 3.7.2. We may use it to extract information to do a better bug report. Do you think there is enough PetscInfo added to resolve this issue? What else would you add? Thanks, Eric On 21/06/16 09:36 AM, hong at aspiritech.org wrote: > Eric: > The nonscalable implementation is robust, and faster for small to medium > size problems, thus we set it as the default. You can switch with option > '-matmatmult_via scalable', which requires estimate of nonzeros A*B. > The estimate was buggy, not well-tested. If you encounter any problem, > let us know. > > Hong > > On Mon, Jun 20, 2016 at 10:49 PM, Eric Chamberland > > wrote: > > > > Le 2016-06-20 23:37, Barry Smith a ?crit : > > On Jun 20, 2016, at 10:32 PM, Eric Chamberland > > wrote: > > ok, but what about -matmatmult_via scalable? > > Both should work. It just may be one is faster or slower > than the other depending on the problem size. > > ok, digging further, I found this into blaming the code: > > 0fc8cf34 (Hong Zhang 2013-06-27 14:04:58 -0500 696) /* same > as MatMatMultSymbolic_MPIAIJ_MPIAIJ_nonscalable(), except using > LLCondensed to avoid O(BN) memory requirement */ > > But the commit comment says: > ... > rename MatMatMultSymbolic_MPIAIJ_MPIAIJ -> > MatMatMultSymbolic_MPIAIJ_MPIAIJ_nonscalable (non-default) > > But it *is* the default... since another commit: > > commit 0d3441ae8a080c728abf17e90308c510e39e951b > Author: Hong Zhang > > Date: Mon Aug 24 16:40:35 2015 -0500 > > add MatPtAPxxx_MPIAIJ_MPIAIJ_new > > which changed the behaviour programmed in 0fc8cf34. Is it normal? > > Eric > > > -------------- next part -------------- commit a965ae203520bf228c3e87d1afcbac679da3e65a Author: Eric Chamberland Date: Mon Jun 20 14:24:53 2016 -0400 DBG: Info pour matmatmult diff --git a/src/mat/impls/aij/mpi/mpimatmatmult.c b/src/mat/impls/aij/mpi/mpimatmatmult.c index 816b735..6a81b70 100644 --- a/src/mat/impls/aij/mpi/mpimatmatmult.c +++ b/src/mat/impls/aij/mpi/mpimatmatmult.c @@ -212,12 +212,15 @@ PetscErrorCode MatMatMultSymbolic_MPIAIJ_MPIAIJ_nonscalable(Mat A,Mat P,PetscRea /* first, compute symbolic AP = A_loc*P = A_diag*P_loc + A_off*P_oth */ /*-------------------------------------------------------------------*/ + ierr = PetscInfo1(A,"MatMatMultSymns_mpi_mpi: PetscMalloc1 am+2 %d;\n",am+2);CHKERRQ(ierr); + printf("COUCOU DANS MATMATMULTMPINS\n"); ierr = PetscMalloc1(am+2,&api);CHKERRQ(ierr); ptap->api = api; api[0] = 0; /* create and initialize a linked list */ - ierr = PetscTableCreate(pN,pN,&ta);CHKERRQ(ierr); + ierr = PetscInfo1(A,"MatMatMultSymns_mpi_mpi: PetscTableCreate pN %d;\n",pN);CHKERRQ(ierr); + ierr = PetscTableCreate(pN,pN,&ta);CHKERRQ(ierr); MatRowMergeMax_SeqAIJ(p_loc,ptap->P_loc->rmap->N,ta); MatRowMergeMax_SeqAIJ(p_oth,ptap->P_oth->rmap->N,ta); ierr = PetscTableGetCount(ta,&Crmax);CHKERRQ(ierr); @@ -226,6 +229,11 @@ PetscErrorCode MatMatMultSymbolic_MPIAIJ_MPIAIJ_nonscalable(Mat A,Mat P,PetscRea ierr = PetscLLCondensedCreate(Crmax,pN,&lnk,&lnkbt);CHKERRQ(ierr); /* Initial FreeSpace size is fill*(nnz(A)+nnz(P)) */ + ierr = PetscInfo1(A,"MatMatMultSymns_mpi_mpi: fill %g;\n",fill);CHKERRQ(ierr); + PetscInt lnnz = PetscIntSumTruncate(adi[am],PetscIntSumTruncate(aoi[am],pi_loc[pm])); + ierr = PetscInfo1(A,"MatMatMultSymns_mpi_mpi: lnnz %g;\n",lnnz);CHKERRQ(ierr); + PetscInt lMem = PetscRealIntMultTruncate(fill,PetscIntSumTruncate(adi[am],PetscIntSumTruncate(aoi[am],pi_loc[pm]))); + ierr = PetscInfo1(A,"MatMatMultSymns_mpi_mpi: lMem %g;\n",lMem);CHKERRQ(ierr); ierr = PetscFreeSpaceGet(PetscRealIntMultTruncate(fill,PetscIntSumTruncate(adi[am],PetscIntSumTruncate(aoi[am],pi_loc[pm]))),&free_space);CHKERRQ(ierr); current_space = free_space; @@ -733,6 +741,8 @@ PetscErrorCode MatMatMultSymbolic_MPIAIJ_MPIAIJ(Mat A,Mat P,PetscReal fill,Mat * /* first, compute symbolic AP = A_loc*P = A_diag*P_loc + A_off*P_oth */ /*-------------------------------------------------------------------*/ + ierr = PetscInfo1(A,"MatMatMultSym_mpi_mpi: PetscMalloc1 am+2 %d;\n",am+2);CHKERRQ(ierr); + printf("COUCOU DANS MATMATMULTMPI\n"); ierr = PetscMalloc1(am+2,&api);CHKERRQ(ierr); ptap->api = api; api[0] = 0; @@ -740,7 +750,9 @@ PetscErrorCode MatMatMultSymbolic_MPIAIJ_MPIAIJ(Mat A,Mat P,PetscReal fill,Mat * /* create and initialize a linked list */ apnz_max = 6*(p_loc->rmax + (PetscInt)(1.e-2*pN)); /* expected apnz_max */ if (apnz_max > pN) apnz_max = pN; - ierr = PetscTableCreate(apnz_max,pN,&ta);CHKERRQ(ierr); + ierr = PetscInfo1(A,"MatMatMultSym_mpi_mpi: PetscTableCreate am+2 %d;\n",apnz_max);CHKERRQ(ierr); + ierr = PetscInfo1(A,"MatMatMultSym_mpi_mpi: PetscTableCreate pN %d;\n",pN);CHKERRQ(ierr); + ierr = PetscTableCreate(apnz_max,pN,&ta);CHKERRQ(ierr); /* Calculate apnz_max */ apnz_max = 0; @@ -765,6 +777,12 @@ PetscErrorCode MatMatMultSymbolic_MPIAIJ_MPIAIJ(Mat A,Mat P,PetscReal fill,Mat * ierr = PetscLLCondensedCreate_Scalable(apnz_max,&lnk);CHKERRQ(ierr); /* Initial FreeSpace size is fill*(nnz(A)+nnz(P)) */ + ierr = PetscInfo1(A,"MatMatMultSym_mpi_mpi: fill %g;\n",fill);CHKERRQ(ierr); + PetscInt lnnz = PetscIntSumTruncate(adi[am],PetscIntSumTruncate(aoi[am],pi_loc[pm])); + ierr = PetscInfo1(A,"MatMatMultSym_mpi_mpi: lnnz %g;\n",lnnz);CHKERRQ(ierr); + PetscInt lMem = PetscRealIntMultTruncate(fill,PetscIntSumTruncate(adi[am],PetscIntSumTruncate(aoi[am],pi_loc[pm]))); + ierr = PetscInfo1(A,"MatMatMultSym_mpi_mpi: lMem %g;\n",lMem);CHKERRQ(ierr); + ierr = PetscFreeSpaceGet(PetscRealIntMultTruncate(fill,PetscIntSumTruncate(adi[am],PetscIntSumTruncate(aoi[am],pi_loc[pm]))),&free_space);CHKERRQ(ierr); current_space = free_space; ierr = MatPreallocateInitialize(comm,am,pn,dnz,onz);CHKERRQ(ierr); From jychang48 at gmail.com Wed Jun 22 02:42:33 2016 From: jychang48 at gmail.com (Justin Chang) Date: Wed, 22 Jun 2016 08:42:33 +0100 Subject: [petsc-users] SetVariableBounds vs ComputeVariableBounds Message-ID: Hi all, I am looking at the SNES tutorials ex9.c and ex58.c and am wondering why SNESVISetComputeVariableBounds() is called instead of just SNESVISetVariableBounds(). When would it be appropriate to use only using the latter? Thanks, Justin -------------- next part -------------- An HTML attachment was scrubbed... URL: From faraz_hussain at yahoo.com Wed Jun 22 09:26:30 2016 From: faraz_hussain at yahoo.com (Faraz Hussain) Date: Wed, 22 Jun 2016 14:26:30 +0000 (UTC) Subject: [petsc-users] Receiving DIVERGED_PCSETUP_FAILED In-Reply-To: <966124275.1153241.1465597641003.JavaMail.yahoo@mail.yahoo.com> References: <2128383548.499195.1465504363992.JavaMail.yahoo.ref@mail.yahoo.com> <2128383548.499195.1465504363992.JavaMail.yahoo@mail.yahoo.com> <981355317.1071825.1465592194420.JavaMail.yahoo@mail.yahoo.com> <37772537-072B-4F76-AB97-EB9DFD336DB3@mcs.anl.gov> <966124275.1153241.1465597641003.JavaMail.yahoo@mail.yahoo.com> Message-ID: <393870777.7604661.1466605590767.JavaMail.yahoo@mail.yahoo.com> Just an update, I got this to work by rebuilding petsc with parmetis, metis and ptscotch.Then I used these settings for Mumps: ?? icntl = 28; ival = 2; ??? ierr = MatMumpsSetIcntl(F,icntl,ival);CHKERRQ(ierr); ??? icntl = 29; ival = 1; ??? ierr = MatMumpsSetIcntl(F,icntl,ival);CHKERRQ(ierr); It still took 4X longer to solve than Intel Pardiso. But after re-configuring petsc with-debugging=0, it ran faster. Still slower than Pardiso, but only 2X slower. From: Faraz Hussain To: Barry Smith Cc: "petsc-users at mcs.anl.gov" Sent: Friday, June 10, 2016 5:27 PM Subject: Re: [petsc-users] Receiving DIVERGED_PCSETUP_FAILED I think the issue is I need to play more with the "parrallel" settings here. http://www.mcs.anl.gov/petsc/petsc-current/docs/manualpages/Mat/MATSOLVERMUMPS.html The example 52.c was based on sequential running. So doing mpiexec -np 48, was basically just using one processor. I also never installed parmetis, metis or ptscotch. Will install and adjust the MUMPS settings and hopefully will get it to converge this weekend! From: Barry Smith To: Faraz Hussain Cc: "petsc-users at mcs.anl.gov" Sent: Friday, June 10, 2016 4:02 PM Subject: Re: [petsc-users] Receiving DIVERGED_PCSETUP_FAILED > On Jun 10, 2016, at 3:56 PM, Faraz Hussain wrote: > > Thanks for the suggestions. I checked but was not able to find out how to change the mumps row pivot threshold of 1e-06. Maybe I will ask on the mumps user forum. This might help. ? ierr = PetscOptionsReal("-mat_mumps_cntl_1","CNTL(1): relative pivoting threshold","None",mumps->id.CNTL(1),&mumps->id.CNTL(1),NULL);CHKERRQ(ierr); ? ierr = PetscOptionsReal("-mat_mumps_cntl_2","CNTL(2): stopping criterion of refinement","None",mumps->id.CNTL(2),&mumps->id.CNTL(2),NULL);CHKERRQ(ierr); ? ierr = PetscOptionsReal("-mat_mumps_cntl_3","CNTL(3): absolute pivoting threshold","None",mumps->id.CNTL(3),&mumps->id.CNTL(3),NULL);CHKERRQ(ierr); ? ierr = PetscOptionsReal("-mat_mumps_cntl_4","CNTL(4): value for static pivoting","None",mumps->id.CNTL(4),&mumps->id.CNTL(4),NULL);CHKERRQ(ierr); Note I don't know what they mean so you need to read the mumps docs. > Regarding: > >? > You need to look at the condition number just before GMRES reaches the restart. It has to start all over again at the restart. So what was the estimated condition number at 999 iterations? > > I ran again and the condition number at 999 iterations is: > > 999 KSP preconditioned resid norm 5.921717188418e-02 true resid norm 5.921717188531e-02 ||r(i)||/||b|| 4.187286380279e-03 > 999 KSP Residual norm 5.921717188418e-02 % max 1.070338898624e+05 min 1.002755075294e-01 max/min 1.067398136390e+06 Ok, so relatively ill-conditioned matrix. But seemingly not terrible. ? Barry > > > From: Barry Smith > To: Faraz Hussain > Cc: "petsc-users at mcs.anl.gov" > Sent: Thursday, June 9, 2016 5:56 PM > Subject: Re: [petsc-users] Receiving DIVERGED_PCSETUP_FAILED > > > > On Jun 9, 2016, at 3:32 PM, Faraz Hussain wrote: > > > > I have been following ex52.c ksp/ksp/examples/tutorials to use MUMPS to directly solve Ax=b. My matrix is symmetric and positive definite. I built a small cantilever beam model with matrix of 5000^2 size. It solves in 2 seconds and gives correct answer. But when I use a finer mesh of the cantilever beam with 3.3 million^2 matrix, I get the following error: > > > >? Mumps row pivot threshhold = 1e-06 > >? Maybe you can change this to get MUMPS to pivot less aggressively. Doing lots of pivoting will require a lot more memory. In theory since it is SPD it should not need to pivot at all. > > >? Mumps determinant = (0., 0.) * 2^0 > > Linear solve did not converge due to DIVERGED_PCSETUP_FAILED iterations 0 > >? ? ? ? ? ? ? PCSETUP_FAILED due to FACTOR_OUTMEMORY > > Norm of error inf. iterations 0 > > > > It runs for more than an hour before aborting with this message. I am running it with this command: > > > > mpiexec -hostfile ./hostfile -np 48 ./ex12 -ksp_converged_reason > > > > My machines have 24 cpus and 125GB Ram. When I do "top" I see it correctly spans 48 processes on 2 nodes. The memory usage of each process is no more than 1-2GB. So I do not understand why it gives FACTOR_OUTMEMORY ? > > > > The same matrix solves in under 5 minutes in Intel Pardiso using 24 cpus on one host. > >? Mumps may be (likely?) is using a different matrix ordering then Intel Pardiso. Unfortunately each of these packages have a different way of asking for orderings and different orderings to chose from so you will need to look at the details for each package. > > > I thought maybe mumps thinks it is ill-conditioned? The model does converge in the iterative solver in 4000 iterations. I also tried running with these options per the FAQ on > > > > " How can I determine the condition number of a matrix? ". > > > > mpiexec -hostfile ./hostfile -np 48 ./ex12 -pc_type none -ksp_type gmres -ksp_monitor_singular_value -ksp_gmres_restart 1000 -ksp_converged_reason -ksp_monitor_true_residual > > > > After 1337 iterations I cancelled it, and the output was: > >? You need to look at the condition number just before GMRES reaches the restart. It has to start all over again at the restart. So what was the estimated condition number at 999 iterations? > >? It could be that Intel Pardiso produced a low quality solution if the matrix is ill conditioned. You can run with -ksp_type gmres -ksp_max_it 5 -ksp_monitor_true_residual with -pc_type lu to see how small the residuals are after the "direct" solver. > >? Barry > > > > > > 1337 KSP preconditioned resid norm 5.647402411074e-02 true resid norm 5.647402411074e-02 ||r(i)||/||b|| 3.993316540960e-03 > > 1337 KSP Residual norm 5.647402411074e-02 % max 1.070324243277e+05 min 1.220336631740e-01 max/min 8.770729448238e+05 > > -------------- next part -------------- An HTML attachment was scrubbed... URL: From faraz_hussain at yahoo.com Wed Jun 22 09:35:37 2016 From: faraz_hussain at yahoo.com (Faraz Hussain) Date: Wed, 22 Jun 2016 14:35:37 +0000 (UTC) Subject: [petsc-users] Example on using VecGetValues? References: <194924965.7644722.1466606137587.JavaMail.yahoo.ref@mail.yahoo.com> Message-ID: <194924965.7644722.1466606137587.JavaMail.yahoo@mail.yahoo.com> I am trying to get my petsc vector of values into my c array of doubles. I tried this but it keeps giving value of 0: VecScatter ctx; VecScatterCreateToZero(petsc_x,&ctx,&petsc_b); VecScatterBegin(ctx,petsc_x,petsc_b,INSERT_VALUES,SCATTER_FORWARD); VecScatterEnd(ctx,petsc_x,petsc_b,INSERT_VALUES,SCATTER_FORWARD); VecScatterDestroy(&ctx); VecView( petsc_b,PETSC_VIEWER_STDOUT_WORLD); PetscScalar value; for ( row=0; row < size ; row++ ) { ierr = VecGetValues( petsc_b, 0, row, &value );CHKERRQ(ierr); b[row] = value; printf ( "Value is %.17g\n", b[row]); } It keeps printing this out, but the values should be real numbers, not 0: Value is 0 Value is 0 Value is 0 .... From hong at aspiritech.org Wed Jun 22 09:36:26 2016 From: hong at aspiritech.org (hong at aspiritech.org) Date: Wed, 22 Jun 2016 09:36:26 -0500 Subject: [petsc-users] On the edge of 2^31 unknowns In-Reply-To: <5769A188.5020705@giref.ulaval.ca> References: <5649F85A.9020807@giref.ulaval.ca> <564A0E55.4010909@giref.ulaval.ca> <869E52FA-3DED-4274-8FBA-C7749F5BBD63@mcs.anl.gov> <564A1FE8.2030404@giref.ulaval.ca> <30507352-1B79-4338-B839-A066159C8CA8@mcs.anl.gov> <576463D5.6060002@giref.ulaval.ca> <5768B0FA.3010507@giref.ulaval.ca> <8678433B-E069-4158-AC26-A9AE0E0C5996@mcs.anl.gov> <5768B541.9000604@giref.ulaval.ca> <5768B964.9060109@giref.ulaval.ca> <5769A188.5020705@giref.ulaval.ca> Message-ID: Eric : > thanks... but I just realized, that into petsc 3.5.4 (which I used for > this calculus) the default *was* the scalable version... :/ > We used it as default in the beginning, then switched to 'nonscalable' as default. We fixed some bugs in the latest release for the scalable version. More testings would help though. > > So I prepared a patch (see attachment) to help debug, but it will be based > on 3.7.2. We may use it to extract information to do a better bug report. > Do you think there is enough PetscInfo added to resolve this issue? > Your patch is to add a set of PetscInfo(). We use PetscInfo for optimization, e.g., line 321 of mpimatmatmult.c: PetscInfo3(Cmpi,"Reallocs %D; Fill ratio: given %g needed %g....); You want to display following info for debugging support: am, pN, lnnz, lMem, apnz_max,... When there is a malloc() failure, PETSc would indicate the line of the code, so user would know which parameter causes the problem. Adding so many PetscInfo() for these parameters is not good for code maintenance, in my opinion. For your problem with 1.7 billion variables, you should use 'scalable' version. Let us know if it fails. Hong > > On 21/06/16 09:36 AM, hong at aspiritech.org wrote: > >> Eric: >> The nonscalable implementation is robust, and faster for small to medium >> size problems, thus we set it as the default. You can switch with option >> '-matmatmult_via scalable', which requires estimate of nonzeros A*B. >> The estimate was buggy, not well-tested. If you encounter any problem, >> let us know. >> >> Hong >> >> On Mon, Jun 20, 2016 at 10:49 PM, Eric Chamberland >> > > wrote: >> >> >> >> Le 2016-06-20 23:37, Barry Smith a ?crit : >> >> On Jun 20, 2016, at 10:32 PM, Eric Chamberland >> > > wrote: >> >> ok, but what about -matmatmult_via scalable? >> >> Both should work. It just may be one is faster or slower >> than the other depending on the problem size. >> >> ok, digging further, I found this into blaming the code: >> >> 0fc8cf34 (Hong Zhang 2013-06-27 14:04:58 -0500 696) /* same >> as MatMatMultSymbolic_MPIAIJ_MPIAIJ_nonscalable(), except using >> LLCondensed to avoid O(BN) memory requirement */ >> >> But the commit comment says: >> ... >> rename MatMatMultSymbolic_MPIAIJ_MPIAIJ -> >> MatMatMultSymbolic_MPIAIJ_MPIAIJ_nonscalable (non-default) >> >> But it *is* the default... since another commit: >> >> commit 0d3441ae8a080c728abf17e90308c510e39e951b >> Author: Hong Zhang > >> Date: Mon Aug 24 16:40:35 2015 -0500 >> >> add MatPtAPxxx_MPIAIJ_MPIAIJ_new >> >> which changed the behaviour programmed in 0fc8cf34. Is it normal? >> >> Eric >> >> >> >> > -------------- next part -------------- An HTML attachment was scrubbed... URL: From Sander.Arens at ugent.be Wed Jun 22 09:52:30 2016 From: Sander.Arens at ugent.be (Sander Arens) Date: Wed, 22 Jun 2016 16:52:30 +0200 Subject: [petsc-users] Problem with interpolating projected field of quadratic order In-Reply-To: References: Message-ID: Ok, I found why it was failing. The gmsh reader didn't invert the tetrahedra (or hexahedra) like it does in the exodus reader (both have the same vertex ordering). The hdf5 to xdmf issue was because the block size for the local coordinates vector was never set. I created a pull request. Thanks, Sander On 19 June 2016 at 23:03, Sander Arens wrote: > And the files of course. > > On 19 June 2016 at 23:02, Sander Arens wrote: > >> Thanks, Matt. That indeed made the problem for the test dissapear. >> >> However, there's still a problem when I try to work with a gmsh mesh. >> >> I modified snes/examples/tutorials/ex77 to read in this mesh (it's just a >> simple bar generated in gmsh) and I used DMPlexReverseCell because the >> jacobian determinants where negative. Snes doesn't converge and looking for >> example in the residual function f1_u_3d shows that x and u are not the >> same at the beginning (which should be though, as the coordinates where >> projected onto u). Please see the attached files ex77.c, makefile and >> bar.msh. >> >> I then tried working with a displacement field instead of deformation and >> this seemed to work (because the initial values where just zero), but the >> directions of the face normals are in the wrong direction because the bar >> was stretched instead of compressed. Please see the attached files >> ex77_2.c, makefile_2 and bar.msh. >> >> So did I forget something when using a read in mesh or is it something >> else? >> >> Also, /bin/petsc_gen_xdmf.py seemed to fail on the output ex77_2.h5 of >> make runex77_2_3 (when using ex77_2.c, makefile_2 and bar.msh). >> >> Thanks for all the help, >> Sander >> >> On 19 June 2016 at 02:17, Matthew Knepley wrote: >> >>> On Sat, Jun 18, 2016 at 12:49 PM, Sander Arens >>> wrote: >>> >>>> 1) Does the test run for you? >>>> >>>> >>>> I ran the tests and they all pass. >>>> >>>> 2) If so, then could it be that you assume something about the order of >>>>> functions? >>>> >>>> >>>> I'm not really sure what you mean with this. >>>> >>>> So the values in 'u' are the FEM coefficients for the coordinate >>>>> function {x, y}. Why are you calling 'x' projected and >>>>> 'y' interpolated? >>>>> >>>> >>>> No, u is a vector with three fields which are obtained in the following >>>> way: >>>> >>>> 1) Project the coordinates onto field nr 0 so that I have the >>>> coordinates for all the dofs >>>> 2) Project the coordinates onto field nr 1, so that I get the >>>> coordinates at the centroid of the cell >>>> 3) Project field nr 0 onto field nr 2, so that I get the coordinates >>>> at the centroid of the cell >>>> >>>> I then output the values of the different fields, so that I can compare >>>> the values of field 1 and 2. >>>> >>>> What I would expect is that the values of field 1 and 2 would be the >>>> same. This is the case for field 0 being P1, but not for P2. >>>> I also projected the coordinates onto a P2 field in >>>> snes/examples/tutorials/ex77.c, but this was done using DMPlexCreateBoxMesh >>>> and gave no problems. >>>> Maybe it's some assumption on the vertex numbering in >>>> DMPlexCreateFromCellList or DMPlexCreateFromFile that I'm not aware of? >>>> >>>> I hope I made the problem clearer now? >>>> >>> >>> Okay, I see what happened now. It is indeed a shortcoming. The way I >>> have things setup now, all fields share the quadrature >>> since that way I can evaluate all fields in the same loop at a >>> quadrature point. This could of course be changed at some cost. >>> I have changed your example to run. >>> >>> Thanks, >>> >>> Matt >>> >>> >>>> Thanks, >>>> Sander >>>> >>>> On 18 June 2016 at 16:33, Matthew Knepley wrote: >>>> >>>>> On Sat, Jun 18, 2016 at 9:26 AM, Matthew Knepley >>>>> wrote: >>>>> >>>>>> On Sat, Jun 18, 2016 at 8:56 AM, Sander Arens >>>>>> wrote: >>>>>> >>>>>>> Hello all, >>>>>>> >>>>>>> Recently I've been trying to run a fem problem using DMPlex, >>>>>>> PetscFE, etc. using a mesh created with gmsh. I used DMPlexReverseCell to >>>>>>> get rid of the negative jacobian determinants. However, I noticed another >>>>>>> problem: when I projected the coordinates on a quadratic fem-field and >>>>>>> interpolated them they didn't match the interpolated values of the original >>>>>>> coordinate field anymore. >>>>>>> >>>>>>> I attached a simple test to reproduce this. With linear >>>>>>> interpolation I see no problem, it's only when I start using quadratic >>>>>>> interpolation. >>>>>>> >>>>>>> I have no idea why this is giving problems. Am I missing something >>>>>>> simple here or is this a bug? >>>>>>> >>>>>> >>>>>> Tests for this already exist >>>>>> >>>>>> >>>>>> https://bitbucket.org/petsc/petsc/src/996a00f1a1693e2d85044ed633fe1848cf357f2a/src/dm/impls/plex/examples/tests/ex3.c?at=master&fileviewer=file-view-default >>>>>> >>>>>> with run parameters here: >>>>>> >>>>>> >>>>>> https://bitbucket.org/petsc/petsc/src/996a00f1a1693e2d85044ed633fe1848cf357f2a/config/builder.py?at=master&fileviewer=file-view-default#builder.py-58 >>>>>> >>>>>> and specifically for P2 triangles >>>>>> >>>>>> >>>>>> https://bitbucket.org/petsc/petsc/src/996a00f1a1693e2d85044ed633fe1848cf357f2a/config/builder.py?at=master&fileviewer=file-view-default#builder.py-72 >>>>>> >>>>>> 1) Does the test run for you? >>>>>> >>>>>> ./config/builder2.py check src/dm/impls/plex/examples/tests/ex3.c >>>>>> >>>>>> 2) If so, then could it be that you assume something about the order >>>>>> of functions? >>>>>> >>>>> >>>>> I am having a hard time understanding what you are doing here: >>>>> >>>>> /* View the projected coordinates field */ >>>>> ierr = VecGetSubVector(u, fields[0], &subvec);CHKERRQ(ierr); >>>>> ierr = PetscObjectSetName((PetscObject) subvec, fieldNames[0]);CHKERRQ(ierr); >>>>> ierr = VecViewFromOptions(subvec, NULL, "-projectedcoordinates_vec_view");CHKERRQ(ierr); >>>>> ierr = VecRestoreSubVector(u, fields[0], &subvec);CHKERRQ(ierr); >>>>> >>>>> /* View the interpolated coordinates field */ >>>>> ierr = VecGetSubVector(u, fields[1], &subvec);CHKERRQ(ierr); >>>>> ierr = PetscObjectSetName((PetscObject) subvec, fieldNames[1]);CHKERRQ(ierr); >>>>> ierr = VecViewFromOptions(subvec, NULL, "-interpolatedcoordinates_vec_view");CHKERRQ(ierr); >>>>> ierr = VecRestoreSubVector(u, fields[1], &subvec);CHKERRQ(ierr); >>>>> >>>>> >>>>> So the values in 'u' are the FEM coefficients for the coordinate >>>>> function {x, y}. Why are you calling 'x' projected and >>>>> 'y' interpolated? >>>>> >>>>> Thanks, >>>>> >>>>> Matt >>>>> >>>>> >>>>>> Thanks, >>>>>> >>>>>> Matt >>>>>> >>>>>> >>>>>>> Thanks, >>>>>>> Sander >>>>>>> >>>>>> >>>>>> >>>>>> >>>>>> -- >>>>>> What most experimenters take for granted before they begin their >>>>>> experiments is infinitely more interesting than any results to which their >>>>>> experiments lead. >>>>>> -- Norbert Wiener >>>>>> >>>>> >>>>> >>>>> >>>>> -- >>>>> What most experimenters take for granted before they begin their >>>>> experiments is infinitely more interesting than any results to which their >>>>> experiments lead. >>>>> -- Norbert Wiener >>>>> >>>> >>>> >>> >>> >>> -- >>> What most experimenters take for granted before they begin their >>> experiments is infinitely more interesting than any results to which their >>> experiments lead. >>> -- Norbert Wiener >>> >> >> > -------------- next part -------------- An HTML attachment was scrubbed... URL: From hzhang at mcs.anl.gov Wed Jun 22 09:53:46 2016 From: hzhang at mcs.anl.gov (Hong) Date: Wed, 22 Jun 2016 09:53:46 -0500 Subject: [petsc-users] Receiving DIVERGED_PCSETUP_FAILED In-Reply-To: <393870777.7604661.1466605590767.JavaMail.yahoo@mail.yahoo.com> References: <2128383548.499195.1465504363992.JavaMail.yahoo.ref@mail.yahoo.com> <2128383548.499195.1465504363992.JavaMail.yahoo@mail.yahoo.com> <981355317.1071825.1465592194420.JavaMail.yahoo@mail.yahoo.com> <37772537-072B-4F76-AB97-EB9DFD336DB3@mcs.anl.gov> <966124275.1153241.1465597641003.JavaMail.yahoo@mail.yahoo.com> <393870777.7604661.1466605590767.JavaMail.yahoo@mail.yahoo.com> Message-ID: Faraz: > Just an update, I got this to work by rebuilding petsc with parmetis, > metis and ptscotch.Then I used these settings for Mumps: > > icntl = 28; ival = 2; > ierr = MatMumpsSetIcntl(F,icntl,ival);CHKERRQ(ierr); > > icntl = 29; ival = 1; > ierr = MatMumpsSetIcntl(F,icntl,ival);CHKERRQ(ierr); > The options use MUMPS parallel symbolic factorization with ptscotch matrix ordering. > > It still took 4X longer to solve than Intel Pardiso. But after > re-configuring petsc with-debugging=0, it ran faster. Still slower than > Pardiso, but only 2X slower. > I've seen report that Intel Pardiso is much faster than mumps, e.g., slepc developer Jose sent me following: With mumps: MatSolve 16 1.0 1.0962e+01 MatLUFactorSym 1 1.0 3.1131e+00 MatLUFactorNum 1 1.0 2.6120e+00 With mkl_pardiso: MatSolve 16 1.0 6.4163e-01 MatLUFactorSym 1 1.0 2.4772e+00 MatLUFactorNum 1 1.0 8.6419e-01 However, petsc only interfaces with sequential mkl_pardiso. Did you get results in parallel or sequential? Hong > > > > > ------------------------------ > *From:* Faraz Hussain > *To:* Barry Smith > *Cc:* "petsc-users at mcs.anl.gov" > *Sent:* Friday, June 10, 2016 5:27 PM > > *Subject:* Re: [petsc-users] Receiving DIVERGED_PCSETUP_FAILED > > I think the issue is I need to play more with the "parrallel" settings > here. > > > http://www.mcs.anl.gov/petsc/petsc-current/docs/manualpages/Mat/MATSOLVERMUMPS.html > > The example 52.c was based on sequential running. So doing mpiexec -np 48, > was basically just using one processor. I also never installed parmetis, > metis or ptscotch. > > Will install and adjust the MUMPS settings and hopefully will get it to > converge this weekend! > > > ------------------------------ > *From:* Barry Smith > *To:* Faraz Hussain > *Cc:* "petsc-users at mcs.anl.gov" > *Sent:* Friday, June 10, 2016 4:02 PM > *Subject:* Re: [petsc-users] Receiving DIVERGED_PCSETUP_FAILED > > > > On Jun 10, 2016, at 3:56 PM, Faraz Hussain > wrote: > > > > Thanks for the suggestions. I checked but was not able to find out how > to change the mumps row pivot threshold of 1e-06. Maybe I will ask on the > mumps user forum. > > This might help. > > ierr = PetscOptionsReal("-mat_mumps_cntl_1","CNTL(1): relative pivoting > threshold","None",mumps->id.CNTL(1),&mumps->id.CNTL(1),NULL);CHKERRQ(ierr); > ierr = PetscOptionsReal("-mat_mumps_cntl_2","CNTL(2): stopping criterion > of > refinement","None",mumps->id.CNTL(2),&mumps->id.CNTL(2),NULL);CHKERRQ(ierr); > ierr = PetscOptionsReal("-mat_mumps_cntl_3","CNTL(3): absolute pivoting > threshold","None",mumps->id.CNTL(3),&mumps->id.CNTL(3),NULL);CHKERRQ(ierr); > ierr = PetscOptionsReal("-mat_mumps_cntl_4","CNTL(4): value for static > pivoting","None",mumps->id.CNTL(4),&mumps->id.CNTL(4),NULL);CHKERRQ(ierr); > > Note I don't know what they mean so you need to read the mumps docs. > > > Regarding: > > > > > You need to look at the condition number just before GMRES reaches > the restart. It has to start all over again at the restart. So what was the > estimated condition number at 999 iterations? > > > > I ran again and the condition number at 999 iterations is: > > > > 999 KSP preconditioned resid norm 5.921717188418e-02 true resid norm > 5.921717188531e-02 ||r(i)||/||b|| 4.187286380279e-03 > > 999 KSP Residual norm 5.921717188418e-02 % max 1.070338898624e+05 min > 1.002755075294e-01 max/min 1.067398136390e+06 > > Ok, so relatively ill-conditioned matrix. But seemingly not terrible. > > Barry > > > > > > > > From: Barry Smith > > To: Faraz Hussain > > Cc: "petsc-users at mcs.anl.gov" > > Sent: Thursday, June 9, 2016 5:56 PM > > Subject: Re: [petsc-users] Receiving DIVERGED_PCSETUP_FAILED > > > > > > > On Jun 9, 2016, at 3:32 PM, Faraz Hussain > wrote: > > > > > > I have been following ex52.c ksp/ksp/examples/tutorials to use MUMPS > to directly solve Ax=b. My matrix is symmetric and positive definite. I > built a small cantilever beam model with matrix of 5000^2 size. It solves > in 2 seconds and gives correct answer. But when I use a finer mesh of the > cantilever beam with 3.3 million^2 matrix, I get the following error: > > > > > > Mumps row pivot threshhold = 1e-06 > > > > Maybe you can change this to get MUMPS to pivot less aggressively. > Doing lots of pivoting will require a lot more memory. In theory since it > is SPD it should not need to pivot at all. > > > > > Mumps determinant = (0., 0.) * 2^0 > > > Linear solve did not converge due to DIVERGED_PCSETUP_FAILED > iterations 0 > > > PCSETUP_FAILED due to FACTOR_OUTMEMORY > > > Norm of error inf. iterations 0 > > > > > > It runs for more than an hour before aborting with this message. I am > running it with this command: > > > > > > mpiexec -hostfile ./hostfile -np 48 ./ex12 -ksp_converged_reason > > > > > > My machines have 24 cpus and 125GB Ram. When I do "top" I see it > correctly spans 48 processes on 2 nodes. The memory usage of each process > is no more than 1-2GB. So I do not understand why it gives FACTOR_OUTMEMORY > ? > > > > > > The same matrix solves in under 5 minutes in Intel Pardiso using 24 > cpus on one host. > > > > Mumps may be (likely?) is using a different matrix ordering then Intel > Pardiso. Unfortunately each of these packages have a different way of > asking for orderings and different orderings to chose from so you will need > to look at the details for each package. > > > > > I thought maybe mumps thinks it is ill-conditioned? The model does > converge in the iterative solver in 4000 iterations. I also tried running > with these options per the FAQ on > > > > > > " How can I determine the condition number of a matrix? ". > > > > > > mpiexec -hostfile ./hostfile -np 48 ./ex12 -pc_type none -ksp_type > gmres -ksp_monitor_singular_value -ksp_gmres_restart 1000 > -ksp_converged_reason -ksp_monitor_true_residual > > > > > > After 1337 iterations I cancelled it, and the output was: > > > > You need to look at the condition number just before GMRES reaches the > restart. It has to start all over again at the restart. So what was the > estimated condition number at 999 iterations? > > > > It could be that Intel Pardiso produced a low quality solution if the > matrix is ill conditioned. You can run with -ksp_type gmres -ksp_max_it 5 > -ksp_monitor_true_residual with -pc_type lu to see how small the residuals > are after the "direct" solver. > > > > Barry > > > > > > > > > > 1337 KSP preconditioned resid norm 5.647402411074e-02 true resid norm > 5.647402411074e-02 ||r(i)||/||b|| 3.993316540960e-03 > > > 1337 KSP Residual norm 5.647402411074e-02 % max 1.070324243277e+05 min > 1.220336631740e-01 max/min 8.770729448238e+05 > > > > > > > > > -------------- next part -------------- An HTML attachment was scrubbed... URL: From knepley at gmail.com Wed Jun 22 10:14:32 2016 From: knepley at gmail.com (Matthew Knepley) Date: Wed, 22 Jun 2016 08:14:32 -0700 Subject: [petsc-users] Problem with interpolating projected field of quadratic order In-Reply-To: References: Message-ID: On Wed, Jun 22, 2016 at 7:52 AM, Sander Arens wrote: > Ok, I found why it was failing. The gmsh reader didn't invert the > tetrahedra (or hexahedra) like it does in the exodus reader (both have the > same vertex ordering). > The hdf5 to xdmf issue was because the block size for the local > coordinates vector was never set. > I created a pull request. > Thanks for finding this. I come back from the conference tomorrow, so I can get it integrated before the end of the week. Matt > Thanks, > Sander > > On 19 June 2016 at 23:03, Sander Arens wrote: > >> And the files of course. >> >> On 19 June 2016 at 23:02, Sander Arens wrote: >> >>> Thanks, Matt. That indeed made the problem for the test dissapear. >>> >>> However, there's still a problem when I try to work with a gmsh mesh. >>> >>> I modified snes/examples/tutorials/ex77 to read in this mesh (it's just >>> a simple bar generated in gmsh) and I used DMPlexReverseCell because the >>> jacobian determinants where negative. Snes doesn't converge and looking for >>> example in the residual function f1_u_3d shows that x and u are not the >>> same at the beginning (which should be though, as the coordinates where >>> projected onto u). Please see the attached files ex77.c, makefile and >>> bar.msh. >>> >>> I then tried working with a displacement field instead of deformation >>> and this seemed to work (because the initial values where just zero), but >>> the directions of the face normals are in the wrong direction because the >>> bar was stretched instead of compressed. Please see the attached files >>> ex77_2.c, makefile_2 and bar.msh. >>> >>> So did I forget something when using a read in mesh or is it something >>> else? >>> >>> Also, /bin/petsc_gen_xdmf.py seemed to fail on the output ex77_2.h5 of >>> make runex77_2_3 (when using ex77_2.c, makefile_2 and bar.msh). >>> >>> Thanks for all the help, >>> Sander >>> >>> On 19 June 2016 at 02:17, Matthew Knepley wrote: >>> >>>> On Sat, Jun 18, 2016 at 12:49 PM, Sander Arens >>>> wrote: >>>> >>>>> 1) Does the test run for you? >>>>> >>>>> >>>>> I ran the tests and they all pass. >>>>> >>>>> 2) If so, then could it be that you assume something about the order >>>>>> of functions? >>>>> >>>>> >>>>> I'm not really sure what you mean with this. >>>>> >>>>> So the values in 'u' are the FEM coefficients for the coordinate >>>>>> function {x, y}. Why are you calling 'x' projected and >>>>>> 'y' interpolated? >>>>>> >>>>> >>>>> No, u is a vector with three fields which are obtained in the >>>>> following way: >>>>> >>>>> 1) Project the coordinates onto field nr 0 so that I have the >>>>> coordinates for all the dofs >>>>> 2) Project the coordinates onto field nr 1, so that I get the >>>>> coordinates at the centroid of the cell >>>>> 3) Project field nr 0 onto field nr 2, so that I get the coordinates >>>>> at the centroid of the cell >>>>> >>>>> I then output the values of the different fields, so that I can >>>>> compare the values of field 1 and 2. >>>>> >>>>> What I would expect is that the values of field 1 and 2 would be the >>>>> same. This is the case for field 0 being P1, but not for P2. >>>>> I also projected the coordinates onto a P2 field in >>>>> snes/examples/tutorials/ex77.c, but this was done using DMPlexCreateBoxMesh >>>>> and gave no problems. >>>>> Maybe it's some assumption on the vertex numbering in >>>>> DMPlexCreateFromCellList or DMPlexCreateFromFile that I'm not aware of? >>>>> >>>>> I hope I made the problem clearer now? >>>>> >>>> >>>> Okay, I see what happened now. It is indeed a shortcoming. The way I >>>> have things setup now, all fields share the quadrature >>>> since that way I can evaluate all fields in the same loop at a >>>> quadrature point. This could of course be changed at some cost. >>>> I have changed your example to run. >>>> >>>> Thanks, >>>> >>>> Matt >>>> >>>> >>>>> Thanks, >>>>> Sander >>>>> >>>>> On 18 June 2016 at 16:33, Matthew Knepley wrote: >>>>> >>>>>> On Sat, Jun 18, 2016 at 9:26 AM, Matthew Knepley >>>>>> wrote: >>>>>> >>>>>>> On Sat, Jun 18, 2016 at 8:56 AM, Sander Arens >>>>>> > wrote: >>>>>>> >>>>>>>> Hello all, >>>>>>>> >>>>>>>> Recently I've been trying to run a fem problem using DMPlex, >>>>>>>> PetscFE, etc. using a mesh created with gmsh. I used DMPlexReverseCell to >>>>>>>> get rid of the negative jacobian determinants. However, I noticed another >>>>>>>> problem: when I projected the coordinates on a quadratic fem-field and >>>>>>>> interpolated them they didn't match the interpolated values of the original >>>>>>>> coordinate field anymore. >>>>>>>> >>>>>>>> I attached a simple test to reproduce this. With linear >>>>>>>> interpolation I see no problem, it's only when I start using quadratic >>>>>>>> interpolation. >>>>>>>> >>>>>>>> I have no idea why this is giving problems. Am I missing something >>>>>>>> simple here or is this a bug? >>>>>>>> >>>>>>> >>>>>>> Tests for this already exist >>>>>>> >>>>>>> >>>>>>> https://bitbucket.org/petsc/petsc/src/996a00f1a1693e2d85044ed633fe1848cf357f2a/src/dm/impls/plex/examples/tests/ex3.c?at=master&fileviewer=file-view-default >>>>>>> >>>>>>> with run parameters here: >>>>>>> >>>>>>> >>>>>>> https://bitbucket.org/petsc/petsc/src/996a00f1a1693e2d85044ed633fe1848cf357f2a/config/builder.py?at=master&fileviewer=file-view-default#builder.py-58 >>>>>>> >>>>>>> and specifically for P2 triangles >>>>>>> >>>>>>> >>>>>>> https://bitbucket.org/petsc/petsc/src/996a00f1a1693e2d85044ed633fe1848cf357f2a/config/builder.py?at=master&fileviewer=file-view-default#builder.py-72 >>>>>>> >>>>>>> 1) Does the test run for you? >>>>>>> >>>>>>> ./config/builder2.py check src/dm/impls/plex/examples/tests/ex3.c >>>>>>> >>>>>>> 2) If so, then could it be that you assume something about the order >>>>>>> of functions? >>>>>>> >>>>>> >>>>>> I am having a hard time understanding what you are doing here: >>>>>> >>>>>> /* View the projected coordinates field */ >>>>>> ierr = VecGetSubVector(u, fields[0], &subvec);CHKERRQ(ierr); >>>>>> ierr = PetscObjectSetName((PetscObject) subvec, fieldNames[0]);CHKERRQ(ierr); >>>>>> ierr = VecViewFromOptions(subvec, NULL, "-projectedcoordinates_vec_view");CHKERRQ(ierr); >>>>>> ierr = VecRestoreSubVector(u, fields[0], &subvec);CHKERRQ(ierr); >>>>>> >>>>>> /* View the interpolated coordinates field */ >>>>>> ierr = VecGetSubVector(u, fields[1], &subvec);CHKERRQ(ierr); >>>>>> ierr = PetscObjectSetName((PetscObject) subvec, fieldNames[1]);CHKERRQ(ierr); >>>>>> ierr = VecViewFromOptions(subvec, NULL, "-interpolatedcoordinates_vec_view");CHKERRQ(ierr); >>>>>> ierr = VecRestoreSubVector(u, fields[1], &subvec);CHKERRQ(ierr); >>>>>> >>>>>> >>>>>> So the values in 'u' are the FEM coefficients for the coordinate >>>>>> function {x, y}. Why are you calling 'x' projected and >>>>>> 'y' interpolated? >>>>>> >>>>>> Thanks, >>>>>> >>>>>> Matt >>>>>> >>>>>> >>>>>>> Thanks, >>>>>>> >>>>>>> Matt >>>>>>> >>>>>>> >>>>>>>> Thanks, >>>>>>>> Sander >>>>>>>> >>>>>>> >>>>>>> >>>>>>> >>>>>>> -- >>>>>>> What most experimenters take for granted before they begin their >>>>>>> experiments is infinitely more interesting than any results to which their >>>>>>> experiments lead. >>>>>>> -- Norbert Wiener >>>>>>> >>>>>> >>>>>> >>>>>> >>>>>> -- >>>>>> What most experimenters take for granted before they begin their >>>>>> experiments is infinitely more interesting than any results to which their >>>>>> experiments lead. >>>>>> -- Norbert Wiener >>>>>> >>>>> >>>>> >>>> >>>> >>>> -- >>>> What most experimenters take for granted before they begin their >>>> experiments is infinitely more interesting than any results to which their >>>> experiments lead. >>>> -- Norbert Wiener >>>> >>> >>> >> > -- What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead. -- Norbert Wiener -------------- next part -------------- An HTML attachment was scrubbed... URL: From it.sadr at gmail.com Wed Jun 22 11:21:24 2016 From: it.sadr at gmail.com (ehsan sadrfaridpour) Date: Wed, 22 Jun 2016 12:21:24 -0400 Subject: [petsc-users] VecGetSubVector causes NaN Message-ID: Hi, If I use VecGetSubVector to get a subvector it works fine as far as I don't destroy the original vector. But, if I destroy the original vector, I get NaN values. So, it is my misunderstanding of what the function suppose to do, or is it a problem? I do the same thing with MatGetSubMatrix and I haven't had any problem with it. Best, Ehsan -------------- next part -------------- An HTML attachment was scrubbed... URL: From faraz_hussain at yahoo.com Wed Jun 22 11:24:05 2016 From: faraz_hussain at yahoo.com (Faraz Hussain) Date: Wed, 22 Jun 2016 16:24:05 +0000 (UTC) Subject: [petsc-users] Receiving DIVERGED_PCSETUP_FAILED In-Reply-To: References: <2128383548.499195.1465504363992.JavaMail.yahoo.ref@mail.yahoo.com> <2128383548.499195.1465504363992.JavaMail.yahoo@mail.yahoo.com> <981355317.1071825.1465592194420.JavaMail.yahoo@mail.yahoo.com> <37772537-072B-4F76-AB97-EB9DFD336DB3@mcs.anl.gov> <966124275.1153241.1465597641003.JavaMail.yahoo@mail.yahoo.com> <393870777.7604661.1466605590767.JavaMail.yahoo@mail.yahoo.com> Message-ID: <2090010653.8116981.1466612645642.JavaMail.yahoo@mail.yahoo.com> My application already has Intel pardiso solver built-in, but it can only run on a single compute node ( no mpi ). Using a 3million^2 sparse symmetric matrix as a benchmark: Pardiso using all 24 cpus on 1 compute nodes factors it in 3 minutes Mumps takes: 24 cpus ( 1 node ) : 15 minutes48 cpus ( 2 nodes ) : 9 minutes72 cpus ( 3 nodes ) : 6 minutes So mumps does scale well with more cpus, but still can not match pardiso solver on one compute node.? I am not sure if this is expected behavior of Mumps or I need to spend more time playing with all the parameters in mumps... From: Hong To: Faraz Hussain Cc: Barry Smith ; "petsc-users at mcs.anl.gov" Sent: Wednesday, June 22, 2016 9:53 AM Subject: Re: [petsc-users] Receiving DIVERGED_PCSETUP_FAILED Faraz: Just an update, I got this to work by rebuilding petsc with parmetis, metis and ptscotch.Then I used these settings for Mumps: ?? icntl = 28; ival = 2; ??? ierr = MatMumpsSetIcntl(F,icntl,ival);CHKERRQ(ierr); ??? icntl = 29; ival = 1; ??? ierr = MatMumpsSetIcntl(F,icntl,ival);CHKERRQ(ierr); ?The options use MUMPS ?parallel symbolic factorization with ptscotch matrix ordering. It still took 4X longer to solve than Intel Pardiso. But after re-configuring petsc with-debugging=0, it ran faster. Still slower than Pardiso, but only 2X slower. ?I've seen report that ?Intel Pardiso is much faster than mumps, e.g.,slepc developer Jose sent me following:With mumps: MatSolve? ? ? ? ? ? ? 16 1.0 1.0962e+01 MatLUFactorSym? ? ? ? ?1 1.0 3.1131e+00 MatLUFactorNum? ? ? ? ?1 1.0 2.6120e+00 With mkl_pardiso: MatSolve? ? ? ? ? ? ? 16 1.0 6.4163e-01 MatLUFactorSym? ? ? ? ?1 1.0 2.4772e+00 MatLUFactorNum? ? ? ? ?1 1.0 8.6419e-01 However, petsc only interfaces with sequential mkl_pardiso. Did you get results in parallel or sequential? Hong From: Faraz Hussain To: Barry Smith Cc: "petsc-users at mcs.anl.gov" Sent: Friday, June 10, 2016 5:27 PM Subject: Re: [petsc-users] Receiving DIVERGED_PCSETUP_FAILED I think the issue is I need to play more with the "parrallel" settings here. http://www.mcs.anl.gov/petsc/petsc-current/docs/manualpages/Mat/MATSOLVERMUMPS.html The example 52.c was based on sequential running. So doing mpiexec -np 48, was basically just using one processor. I also never installed parmetis, metis or ptscotch. Will install and adjust the MUMPS settings and hopefully will get it to converge this weekend! From: Barry Smith To: Faraz Hussain Cc: "petsc-users at mcs.anl.gov" Sent: Friday, June 10, 2016 4:02 PM Subject: Re: [petsc-users] Receiving DIVERGED_PCSETUP_FAILED > On Jun 10, 2016, at 3:56 PM, Faraz Hussain wrote: > > Thanks for the suggestions. I checked but was not able to find out how to change the mumps row pivot threshold of 1e-06. Maybe I will ask on the mumps user forum. This might help. ? ierr = PetscOptionsReal("-mat_mumps_cntl_1","CNTL(1): relative pivoting threshold","None",mumps->id.CNTL(1),&mumps->id.CNTL(1),NULL);CHKERRQ(ierr); ? ierr = PetscOptionsReal("-mat_mumps_cntl_2","CNTL(2): stopping criterion of refinement","None",mumps->id.CNTL(2),&mumps->id.CNTL(2),NULL);CHKERRQ(ierr); ? ierr = PetscOptionsReal("-mat_mumps_cntl_3","CNTL(3): absolute pivoting threshold","None",mumps->id.CNTL(3),&mumps->id.CNTL(3),NULL);CHKERRQ(ierr); ? ierr = PetscOptionsReal("-mat_mumps_cntl_4","CNTL(4): value for static pivoting","None",mumps->id.CNTL(4),&mumps->id.CNTL(4),NULL);CHKERRQ(ierr); Note I don't know what they mean so you need to read the mumps docs. > Regarding: > >? > You need to look at the condition number just before GMRES reaches the restart. It has to start all over again at the restart. So what was the estimated condition number at 999 iterations? > > I ran again and the condition number at 999 iterations is: > > 999 KSP preconditioned resid norm 5.921717188418e-02 true resid norm 5.921717188531e-02 ||r(i)||/||b|| 4.187286380279e-03 > 999 KSP Residual norm 5.921717188418e-02 % max 1.070338898624e+05 min 1.002755075294e-01 max/min 1.067398136390e+06 Ok, so relatively ill-conditioned matrix. But seemingly not terrible. ? Barry > > > From: Barry Smith > To: Faraz Hussain > Cc: "petsc-users at mcs.anl.gov" > Sent: Thursday, June 9, 2016 5:56 PM > Subject: Re: [petsc-users] Receiving DIVERGED_PCSETUP_FAILED > > > > On Jun 9, 2016, at 3:32 PM, Faraz Hussain wrote: > > > > I have been following ex52.c ksp/ksp/examples/tutorials to use MUMPS to directly solve Ax=b. My matrix is symmetric and positive definite. I built a small cantilever beam model with matrix of 5000^2 size. It solves in 2 seconds and gives correct answer. But when I use a finer mesh of the cantilever beam with 3.3 million^2 matrix, I get the following error: > > > >? Mumps row pivot threshhold = 1e-06 > >? Maybe you can change this to get MUMPS to pivot less aggressively. Doing lots of pivoting will require a lot more memory. In theory since it is SPD it should not need to pivot at all. > > >? Mumps determinant = (0., 0.) * 2^0 > > Linear solve did not converge due to DIVERGED_PCSETUP_FAILED iterations 0 > >? ? ? ? ? ? ? PCSETUP_FAILED due to FACTOR_OUTMEMORY > > Norm of error inf. iterations 0 > > > > It runs for more than an hour before aborting with this message. I am running it with this command: > > > > mpiexec -hostfile ./hostfile -np 48 ./ex12 -ksp_converged_reason > > > > My machines have 24 cpus and 125GB Ram. When I do "top" I see it correctly spans 48 processes on 2 nodes. The memory usage of each process is no more than 1-2GB. So I do not understand why it gives FACTOR_OUTMEMORY ? > > > > The same matrix solves in under 5 minutes in Intel Pardiso using 24 cpus on one host. > >? Mumps may be (likely?) is using a different matrix ordering then Intel Pardiso. Unfortunately each of these packages have a different way of asking for orderings and different orderings to chose from so you will need to look at the details for each package. > > > I thought maybe mumps thinks it is ill-conditioned? The model does converge in the iterative solver in 4000 iterations. I also tried running with these options per the FAQ on > > > > " How can I determine the condition number of a matrix? ". > > > > mpiexec -hostfile ./hostfile -np 48 ./ex12 -pc_type none -ksp_type gmres -ksp_monitor_singular_value -ksp_gmres_restart 1000 -ksp_converged_reason -ksp_monitor_true_residual > > > > After 1337 iterations I cancelled it, and the output was: > >? You need to look at the condition number just before GMRES reaches the restart. It has to start all over again at the restart. So what was the estimated condition number at 999 iterations? > >? It could be that Intel Pardiso produced a low quality solution if the matrix is ill conditioned. You can run with -ksp_type gmres -ksp_max_it 5 -ksp_monitor_true_residual with -pc_type lu to see how small the residuals are after the "direct" solver. > >? Barry > > > > > > 1337 KSP preconditioned resid norm 5.647402411074e-02 true resid norm 5.647402411074e-02 ||r(i)||/||b|| 3.993316540960e-03 > > 1337 KSP Residual norm 5.647402411074e-02 % max 1.070324243277e+05 min 1.220336631740e-01 max/min 8.770729448238e+05 > > -------------- next part -------------- An HTML attachment was scrubbed... URL: From knepley at gmail.com Wed Jun 22 11:44:48 2016 From: knepley at gmail.com (Matthew Knepley) Date: Wed, 22 Jun 2016 09:44:48 -0700 Subject: [petsc-users] [petsc-maint] VecGetSubVector causes NaN In-Reply-To: References: Message-ID: On Wed, Jun 22, 2016 at 9:21 AM, ehsan sadrfaridpour wrote: > Hi, > > If I use VecGetSubVector to get a subvector it works fine as far as I > don't destroy the original vector. > But, if I destroy the original vector, I get NaN values. So, it is my > misunderstanding of what the function suppose to do, or is it a problem? > You cannot destroy the original vector since you still need to call http://www.mcs.anl.gov/petsc/petsc-current/docs/manualpages/Vec/VecRestoreSubVector.html#VecRestoreSubVector > I do the same thing with MatGetSubMatrix > > and I haven't had any problem with it. > MatGetSubMatrix() is a hybrid since for INITIAL_MATRIX it creates a new matrix, whereas for REUSE_MATRIX it refills and existing one. However there is not Restore(). http://www.mcs.anl.gov/petsc/petsc-current/docs/manualpages/Mat/MatGetSubMatrix.html Matt Best, > Ehsan > -- What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead. -- Norbert Wiener -------------- next part -------------- An HTML attachment was scrubbed... URL: From bsmith at mcs.anl.gov Wed Jun 22 12:13:54 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Wed, 22 Jun 2016 12:13:54 -0500 Subject: [petsc-users] SetVariableBounds vs ComputeVariableBounds In-Reply-To: References: Message-ID: <5483C0B8-EFFD-42E5-8507-60C64630F5DD@mcs.anl.gov> > On Jun 22, 2016, at 2:42 AM, Justin Chang wrote: > > Hi all, > > I am looking at the SNES tutorials ex9.c and ex58.c and am wondering why SNESVISetComputeVariableBounds() is called instead of just SNESVISetVariableBounds(). When would it be appropriate to use only using the latter? It is sort of similar to KSPSetOperators() and KSPSetComputeOperators(). The first is perhaps conceptually simpler since it is based on the old "subroutine library" model where you pass data to a subroutine and it does something and returns while the second is like a "call-back" library where during the time the library "does something" it comes back and asks the user for something. I think you can always reproduce the "subroutine library" approach with the "call-back" approach so in some sense the SNESVISetVariableBounds() is not needed. Barry Matt has always wanted to get rid of KSPSetOperators() and always use the call back approach for solvers; I've resisted because many people like the simplicity of not providing callbacks. > > Thanks, > Justin From bsmith at mcs.anl.gov Wed Jun 22 12:23:21 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Wed, 22 Jun 2016 12:23:21 -0500 Subject: [petsc-users] Example on using VecGetValues? In-Reply-To: <194924965.7644722.1466606137587.JavaMail.yahoo@mail.yahoo.com> References: <194924965.7644722.1466606137587.JavaMail.yahoo.ref@mail.yahoo.com> <194924965.7644722.1466606137587.JavaMail.yahoo@mail.yahoo.com> Message-ID: <8EE6E857-D0D6-4D0B-823C-84E66671B75A@mcs.anl.gov> You need ierr = VecGetValues( petsc_b, 1, &row, &value );CHKERRQ(ierr); ^^^^^^^^ previously you were asking for zero entries from the vector > On Jun 22, 2016, at 9:35 AM, Faraz Hussain wrote: > > I am trying to get my petsc vector of values into my c array of doubles. I tried this but it keeps giving value of 0: > > > VecScatter ctx; > VecScatterCreateToZero(petsc_x,&ctx,&petsc_b); > VecScatterBegin(ctx,petsc_x,petsc_b,INSERT_VALUES,SCATTER_FORWARD); > VecScatterEnd(ctx,petsc_x,petsc_b,INSERT_VALUES,SCATTER_FORWARD); > VecScatterDestroy(&ctx); > > VecView( petsc_b,PETSC_VIEWER_STDOUT_WORLD); > > > PetscScalar value; > for ( row=0; row < size ; row++ ) { > ierr = VecGetValues( petsc_b, 0, row, &value );CHKERRQ(ierr); > b[row] = value; > printf ( "Value is %.17g\n", b[row]); > } > > It keeps printing this out, but the values should be real numbers, not 0: > > Value is 0 > Value is 0 > Value is 0 > .... From it.sadr at gmail.com Wed Jun 22 13:54:13 2016 From: it.sadr at gmail.com (ehsan sadrfaridpour) Date: Wed, 22 Jun 2016 14:54:13 -0400 Subject: [petsc-users] [petsc-maint] VecGetSubVector causes NaN In-Reply-To: References: Message-ID: Thanks a lot for your prompt reply and useful advice. I have another question. In my current case, I don't change any value in the sub-vector and in another words I used it as read-only. What should I do after I don't need it anymore? Should I call VecRestoreSubVector method or it is faster if I call the Destroy method on the sub-vector ? If I understand you correctly, the subvector doesn't have any space for itself, in that case Destroy method does not release the memory. And finally, I destroy the original vector after I call either Restore or Destroy on the sub-vector. Best, Ehsan On Wed, Jun 22, 2016 at 12:44 PM, Matthew Knepley wrote: > On Wed, Jun 22, 2016 at 9:21 AM, ehsan sadrfaridpour > wrote: > >> Hi, >> >> If I use VecGetSubVector to get a subvector it works fine as far as I >> don't destroy the original vector. >> But, if I destroy the original vector, I get NaN values. So, it is my >> misunderstanding of what the function suppose to do, or is it a problem? >> > > You cannot destroy the original vector since you still need to call > > > http://www.mcs.anl.gov/petsc/petsc-current/docs/manualpages/Vec/VecRestoreSubVector.html#VecRestoreSubVector > > >> I do the same thing with MatGetSubMatrix >> >> and I haven't had any problem with it. >> > > MatGetSubMatrix() is a hybrid since for INITIAL_MATRIX it creates a new > matrix, whereas for REUSE_MATRIX it refills and existing > one. However there is not Restore(). > > > http://www.mcs.anl.gov/petsc/petsc-current/docs/manualpages/Mat/MatGetSubMatrix.html > > Matt > > Best, >> Ehsan >> > > > > -- > What most experimenters take for granted before they begin their > experiments is infinitely more interesting than any results to which their > experiments lead. > -- Norbert Wiener > -------------- next part -------------- An HTML attachment was scrubbed... URL: From knepley at gmail.com Wed Jun 22 14:03:14 2016 From: knepley at gmail.com (Matthew Knepley) Date: Wed, 22 Jun 2016 12:03:14 -0700 Subject: [petsc-users] [petsc-maint] VecGetSubVector causes NaN In-Reply-To: References: Message-ID: On Wed, Jun 22, 2016 at 11:54 AM, ehsan sadrfaridpour wrote: > Thanks a lot for your prompt reply and useful advice. > > I have another question. In my current case, I don't change any value in > the sub-vector and in another words I used it as read-only. > What should I do after I don't need it anymore? > Should I call VecRestoreSubVector method or it is faster if I call the > Destroy method on the sub-vector ? > Restore not Destroy for subvec. > If I understand you correctly, the subvector doesn't have any space for > itself, in that case Destroy method does not release the memory. > > And finally, I destroy the original vector after I call either Restore or > Destroy on the sub-vector. > Yes, after Restore. Matt > Best, > Ehsan > > On Wed, Jun 22, 2016 at 12:44 PM, Matthew Knepley > wrote: > >> On Wed, Jun 22, 2016 at 9:21 AM, ehsan sadrfaridpour >> wrote: >> >>> Hi, >>> >>> If I use VecGetSubVector to get a subvector it works fine as far as I >>> don't destroy the original vector. >>> But, if I destroy the original vector, I get NaN values. So, it is my >>> misunderstanding of what the function suppose to do, or is it a problem? >>> >> >> You cannot destroy the original vector since you still need to call >> >> >> http://www.mcs.anl.gov/petsc/petsc-current/docs/manualpages/Vec/VecRestoreSubVector.html#VecRestoreSubVector >> >> >>> I do the same thing with MatGetSubMatrix >>> >>> and I haven't had any problem with it. >>> >> >> MatGetSubMatrix() is a hybrid since for INITIAL_MATRIX it creates a new >> matrix, whereas for REUSE_MATRIX it refills and existing >> one. However there is not Restore(). >> >> >> http://www.mcs.anl.gov/petsc/petsc-current/docs/manualpages/Mat/MatGetSubMatrix.html >> >> Matt >> >> Best, >>> Ehsan >>> >> >> >> >> -- >> What most experimenters take for granted before they begin their >> experiments is infinitely more interesting than any results to which their >> experiments lead. >> -- Norbert Wiener >> > > -- What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead. -- Norbert Wiener -------------- next part -------------- An HTML attachment was scrubbed... URL: From elbueler at alaska.edu Wed Jun 22 14:42:12 2016 From: elbueler at alaska.edu (Ed Bueler) Date: Wed, 22 Jun 2016 11:42:12 -0800 Subject: [petsc-users] SetVariableBounds vs ComputeVariableBounds Message-ID: Justin -- Yeah, good point. SNESVISetVariableBounds() works fine, at least in ex9.c (see attached patch). The reason for the other choice, which I found in my 5 year old email, was some bug in petsc3.2. Ed Date: Wed, 22 Jun 2016 08:42:33 +0100 > From: Justin Chang > To: petsc-users > Subject: [petsc-users] SetVariableBounds vs ComputeVariableBounds > > Hi all, > > I am looking at the SNES tutorials ex9.c and ex58.c and am wondering why > SNESVISetComputeVariableBounds() is called instead of just > SNESVISetVariableBounds(). When would it be appropriate to use only using > the latter? > > Thanks, > Justin > -------------- next part -------------- An HTML attachment was scrubbed... URL: -------------- next part -------------- diff --git a/src/snes/examples/tutorials/ex9.c b/src/snes/examples/tutorials/ex9.c index 4e57917..acd5ca7 100644 --- a/src/snes/examples/tutorials/ex9.c +++ b/src/snes/examples/tutorials/ex9.c @@ -42,7 +42,6 @@ typedef struct { } ObsCtx; extern PetscErrorCode FormPsiAndExactSoln(DM); -extern PetscErrorCode FormBounds(SNES,Vec,Vec); extern PetscErrorCode FormFunctionLocal(DMDALocalInfo*,PetscScalar**,PetscScalar**,ObsCtx*); extern PetscErrorCode FormJacobianLocal(DMDALocalInfo*,PetscScalar**,Mat,Mat,ObsCtx*); @@ -54,7 +53,8 @@ int main(int argc,char **argv) ObsCtx user; SNES snes; DM da; - Vec u; /* solution */ + Vec u, /* solution */ + Xu; /* upper bound */ DMDALocalInfo info; PetscReal error1,errorinf; @@ -84,7 +84,12 @@ int main(int argc,char **argv) ierr = SNESSetDM(snes,da);CHKERRQ(ierr); ierr = SNESSetApplicationContext(snes,&user);CHKERRQ(ierr); ierr = SNESSetType(snes,SNESVINEWTONRSLS);CHKERRQ(ierr); - ierr = SNESVISetComputeVariableBounds(snes,&FormBounds);CHKERRQ(ierr); + + /* set upper and lower bound constraints for VI */ + ierr = VecDuplicate(u,&Xu);CHKERRQ(ierr); + ierr = VecSet(Xu,PETSC_INFINITY);CHKERRQ(ierr); + ierr = SNESVISetVariableBounds(snes,user.psi,Xu);CHKERRQ(ierr); + ierr = VecDestroy(&Xu);CHKERRQ(ierr); ierr = DMDASNESSetFunctionLocal(da,INSERT_VALUES,(PetscErrorCode (*)(DMDALocalInfo*,void*,void*,void*))FormFunctionLocal,&user);CHKERRQ(ierr); ierr = DMDASNESSetJacobianLocal(da,(PetscErrorCode (*)(DMDALocalInfo*,void*,Mat,Mat,void*))FormJacobianLocal,&user);CHKERRQ(ierr); @@ -158,22 +163,6 @@ PetscErrorCode FormPsiAndExactSoln(DM da) { #undef __FUNCT__ -#define __FUNCT__ "FormBounds" -/* FormBounds() for call-back: tell SNESVI (variational inequality) - that we want u >= psi */ -PetscErrorCode FormBounds(SNES snes, Vec Xl, Vec Xu) { - PetscErrorCode ierr; - ObsCtx *user; - - PetscFunctionBeginUser; - ierr = SNESGetApplicationContext(snes,&user);CHKERRQ(ierr); - ierr = VecCopy(user->psi,Xl);CHKERRQ(ierr); /* u >= psi */ - ierr = VecSet(Xu,PETSC_INFINITY);CHKERRQ(ierr); - PetscFunctionReturn(0); -} - - -#undef __FUNCT__ #define __FUNCT__ "FormFunctionLocal" /* FormFunctionLocal - Evaluates nonlinear function, F(x) on local process patch */ PetscErrorCode FormFunctionLocal(DMDALocalInfo *info,PetscScalar **x,PetscScalar **f,ObsCtx *user) { diff --git a/src/snes/examples/tutorials/output/ex9_5.out b/src/snes/examples/tutorials/output/ex9_5.out index d465a07..8b81a5b 100644 --- a/src/snes/examples/tutorials/output/ex9_5.out +++ b/src/snes/examples/tutorials/output/ex9_5.out @@ -1,6 +1,6 @@ setup done: grid Mx,My = 11,11 with spacing dx,dy = 0.4000,0.4000 0 SNES Function norm 3.8949 1 SNES Function norm 0.595977 - 2 SNES Function norm 1.33042e-06 + 2 SNES Function norm 1.33052e-06 3 SNES Function norm < 1.e-11 errors: av |u-uexact| = 7.156e-03 |u-uexact|_inf = 2.550e-02 diff --git a/src/snes/examples/tutorials/output/ex9_6.out b/src/snes/examples/tutorials/output/ex9_6.out index bbcd4d9..7f04d68 100644 --- a/src/snes/examples/tutorials/output/ex9_6.out +++ b/src/snes/examples/tutorials/output/ex9_6.out @@ -1,53 +1,53 @@ setup done: grid Mx,My = 81,81 with spacing dx,dy = 0.0500,0.0500 0 SNES Function norm 8.91139 - 0 KSP Residual norm 7.66854 - 1 KSP Residual norm 0.0817114 - 2 KSP Residual norm 0.0014303 - 3 KSP Residual norm 4.09214e-05 + 0 KSP Residual norm 7.66838 + 1 KSP Residual norm 0.0855604 + 2 KSP Residual norm 0.00147261 + 3 KSP Residual norm 4.02632e-05 1 SNES Function norm 1.79664 - 0 KSP Residual norm 3.66508 - 1 KSP Residual norm 0.0254715 - 2 KSP Residual norm 0.000698771 - 3 KSP Residual norm 1.52442e-05 + 0 KSP Residual norm 3.66486 + 1 KSP Residual norm 0.0256337 + 2 KSP Residual norm 0.000698574 + 3 KSP Residual norm 1.50355e-05 2 SNES Function norm 0.965357 - 0 KSP Residual norm 2.0992 - 1 KSP Residual norm 0.0107506 - 2 KSP Residual norm 0.000332135 - 3 KSP Residual norm 7.30506e-06 + 0 KSP Residual norm 2.09921 + 1 KSP Residual norm 0.010811 + 2 KSP Residual norm 0.000336569 + 3 KSP Residual norm 7.32146e-06 3 SNES Function norm 0.602599 - 0 KSP Residual norm 1.33076 - 1 KSP Residual norm 0.00851554 - 2 KSP Residual norm 0.000224731 - 3 KSP Residual norm 4.94949e-06 + 0 KSP Residual norm 1.33072 + 1 KSP Residual norm 0.0085465 + 2 KSP Residual norm 0.000224369 + 3 KSP Residual norm 4.90542e-06 4 SNES Function norm 0.37491 - 0 KSP Residual norm 0.826408 - 1 KSP Residual norm 0.00409587 - 2 KSP Residual norm 0.000122243 - 3 KSP Residual norm 2.85825e-06 + 0 KSP Residual norm 0.826413 + 1 KSP Residual norm 0.00411738 + 2 KSP Residual norm 0.000124072 + 3 KSP Residual norm 2.84879e-06 5 SNES Function norm 0.215489 - 0 KSP Residual norm 0.419143 - 1 KSP Residual norm 0.00291159 - 2 KSP Residual norm 8.03321e-05 - 3 KSP Residual norm 1.69582e-06 + 0 KSP Residual norm 0.41911 + 1 KSP Residual norm 0.00292809 + 2 KSP Residual norm 8.03589e-05 + 3 KSP Residual norm 1.69054e-06 6 SNES Function norm 0.110008 - 0 KSP Residual norm 0.145017 - 1 KSP Residual norm 0.00102091 - 2 KSP Residual norm 2.75348e-05 - 3 KSP Residual norm 5.21408e-07 + 0 KSP Residual norm 0.144991 + 1 KSP Residual norm 0.00101012 + 2 KSP Residual norm 2.76287e-05 + 3 KSP Residual norm 5.30273e-07 7 SNES Function norm 0.0509393 - 0 KSP Residual norm 0.06307 - 1 KSP Residual norm 0.000503537 - 2 KSP Residual norm 1.32709e-05 - 3 KSP Residual norm 3.31102e-07 + 0 KSP Residual norm 0.0630681 + 1 KSP Residual norm 0.00050114 + 2 KSP Residual norm 1.32608e-05 + 3 KSP Residual norm 3.33183e-07 8 SNES Function norm 0.00699757 - 0 KSP Residual norm 0.00485744 - 1 KSP Residual norm 3.93063e-05 - 2 KSP Residual norm 1.07492e-06 - 3 KSP Residual norm 2.17717e-08 - 9 SNES Function norm 9.21939e-08 - 0 KSP Residual norm 2.17718e-08 - 1 KSP Residual norm 8.694e-10 - 2 KSP Residual norm 2.238e-11 + 0 KSP Residual norm 0.00485817 + 1 KSP Residual norm 3.88895e-05 + 2 KSP Residual norm 1.07055e-06 + 3 KSP Residual norm 2.16788e-08 + 9 SNES Function norm 9.18511e-08 + 0 KSP Residual norm 2.16788e-08 + 1 KSP Residual norm 8.553e-10 + 2 KSP Residual norm 2.212e-11 3 KSP Residual norm < 1.e-11 4 KSP Residual norm < 1.e-11 10 SNES Function norm < 1.e-11 diff --git a/src/snes/examples/tutorials/output/ex9_7.out b/src/snes/examples/tutorials/output/ex9_7.out index e4b2c9c..27ca8d8 100644 --- a/src/snes/examples/tutorials/output/ex9_7.out +++ b/src/snes/examples/tutorials/output/ex9_7.out @@ -1,18 +1,18 @@ setup done: grid Mx,My = 21,21 with spacing dx,dy = 0.2000,0.2000 0 SNES Function norm 4.16496 - 0 SNES VI Function norm 5.529305066445e+00 Active lower constraints 69/79 upper constraints 0/0 Percent of total 0.156463 Percent of bounded 0. - 1 SNES VI Function norm 6.955134607642e-01 Active lower constraints 57/69 upper constraints 0/0 Percent of total 0.129252 Percent of bounded 0. - 0 SNES VI Function norm 6.955134607642e-01 Active lower constraints 57/69 upper constraints 0/0 Percent of total 0.129252 Percent of bounded 0. - 1 SNES VI Function norm 2.094553435635e-01 Active lower constraints 49/57 upper constraints 0/0 Percent of total 0.111111 Percent of bounded 0. + 0 SNES VI Function norm 5.52931 Active lower constraints 69/79 upper constraints 0/0 Percent of total 0.156463 Percent of bounded 0.156463 + 1 SNES VI Function norm 0.695513 Active lower constraints 57/69 upper constraints 0/0 Percent of total 0.129252 Percent of bounded 0.129252 + 0 SNES VI Function norm 0.695513 Active lower constraints 57/69 upper constraints 0/0 Percent of total 0.129252 Percent of bounded 0.129252 + 1 SNES VI Function norm 0.209455 Active lower constraints 49/57 upper constraints 0/0 Percent of total 0.111111 Percent of bounded 0.111111 1 SNES Function norm 0.209455 - 0 SNES VI Function norm 2.094553435635e-01 Active lower constraints 49/57 upper constraints 0/0 Percent of total 0.111111 Percent of bounded 0. - 1 SNES VI Function norm 8.520955028454e-02 Active lower constraints 45/49 upper constraints 0/0 Percent of total 0.102041 Percent of bounded 0. - 0 SNES VI Function norm 8.520955028454e-02 Active lower constraints 45/49 upper constraints 0/0 Percent of total 0.102041 Percent of bounded 0. - 1 SNES VI Function norm 1.306727995906e-02 Active lower constraints 45/45 upper constraints 0/0 Percent of total 0.102041 Percent of bounded 0. + 0 SNES VI Function norm 0.209455 Active lower constraints 49/57 upper constraints 0/0 Percent of total 0.111111 Percent of bounded 0.111111 + 1 SNES VI Function norm 0.0852096 Active lower constraints 45/49 upper constraints 0/0 Percent of total 0.102041 Percent of bounded 0.102041 + 0 SNES VI Function norm 0.0852096 Active lower constraints 45/49 upper constraints 0/0 Percent of total 0.102041 Percent of bounded 0.102041 + 1 SNES VI Function norm 0.0130673 Active lower constraints 45/45 upper constraints 0/0 Percent of total 0.102041 Percent of bounded 0.102041 2 SNES Function norm 0.0130673 - 0 SNES VI Function norm 1.306727995906e-02 Active lower constraints 45/45 upper constraints 0/0 Percent of total 0.102041 Percent of bounded 0. - 1 SNES VI Function norm 5.700004299565e-08 Active lower constraints 45/45 upper constraints 0/0 Percent of total 0.102041 Percent of bounded 0. - 0 SNES VI Function norm 5.700004299565e-08 Active lower constraints 45/45 upper constraints 0/0 Percent of total 0.102041 Percent of bounded 0. - 1 SNES VI Function norm 4.214574191759e-13 Active lower constraints 45/45 upper constraints 0/0 Percent of total 0.102041 Percent of bounded 0. + 0 SNES VI Function norm 0.0130673 Active lower constraints 45/45 upper constraints 0/0 Percent of total 0.102041 Percent of bounded 0.102041 + 1 SNES VI Function norm 5.7e-08 Active lower constraints 45/45 upper constraints 0/0 Percent of total 0.102041 Percent of bounded 0.102041 + 0 SNES VI Function norm 5.7e-08 Active lower constraints 45/45 upper constraints 0/0 Percent of total 0.102041 Percent of bounded 0.102041 + 1 SNES VI Function norm 4.21547e-13 Active lower constraints 45/45 upper constraints 0/0 Percent of total 0.102041 Percent of bounded 0.102041 3 SNES Function norm < 1.e-11 errors: av |u-uexact| = 1.287e-03 |u-uexact|_inf = 7.882e-03 diff --git a/src/snes/examples/tutorials/output/ex9_8.out b/src/snes/examples/tutorials/output/ex9_8.out index 24cc9a2..10f06d0 100644 --- a/src/snes/examples/tutorials/output/ex9_8.out +++ b/src/snes/examples/tutorials/output/ex9_8.out @@ -1,18 +1,18 @@ setup done: grid Mx,My = 21,21 with spacing dx,dy = 0.2000,0.2000 0 SNES Function norm 4.16496 - 0 SNES VI Function norm 5.529305066445e+00 Active lower constraints 69/79 upper constraints 0/0 Percent of total 0.156463 Percent of bounded 0. - 1 SNES VI Function norm 6.955134607642e-01 Active lower constraints 57/69 upper constraints 0/0 Percent of total 0.129252 Percent of bounded 0. + 0 SNES VI Function norm 5.52931 Active lower constraints 69/79 upper constraints 0/0 Percent of total 0.156463 Percent of bounded 0.156463 + 1 SNES VI Function norm 0.695513 Active lower constraints 57/69 upper constraints 0/0 Percent of total 0.129252 Percent of bounded 0.129252 1 SNES Function norm 0.695513 - 0 SNES VI Function norm 6.955134607642e-01 Active lower constraints 57/69 upper constraints 0/0 Percent of total 0.129252 Percent of bounded 0. - 1 SNES VI Function norm 2.242112530318e-01 Active lower constraints 49/57 upper constraints 0/0 Percent of total 0.111111 Percent of bounded 0. + 0 SNES VI Function norm 0.695513 Active lower constraints 57/69 upper constraints 0/0 Percent of total 0.129252 Percent of bounded 0.129252 + 1 SNES VI Function norm 0.224211 Active lower constraints 49/57 upper constraints 0/0 Percent of total 0.111111 Percent of bounded 0.111111 2 SNES Function norm 0.224211 - 0 SNES VI Function norm 2.242112530318e-01 Active lower constraints 49/57 upper constraints 0/0 Percent of total 0.111111 Percent of bounded 0. - 1 SNES VI Function norm 8.520960015422e-02 Active lower constraints 45/49 upper constraints 0/0 Percent of total 0.102041 Percent of bounded 0. + 0 SNES VI Function norm 0.224211 Active lower constraints 49/57 upper constraints 0/0 Percent of total 0.111111 Percent of bounded 0.111111 + 1 SNES VI Function norm 0.0852096 Active lower constraints 45/49 upper constraints 0/0 Percent of total 0.102041 Percent of bounded 0.102041 3 SNES Function norm 0.0852096 - 0 SNES VI Function norm 8.520960015422e-02 Active lower constraints 45/49 upper constraints 0/0 Percent of total 0.102041 Percent of bounded 0. - 1 SNES VI Function norm 3.719497543884e-07 Active lower constraints 45/45 upper constraints 0/0 Percent of total 0.102041 Percent of bounded 0. + 0 SNES VI Function norm 0.0852096 Active lower constraints 45/49 upper constraints 0/0 Percent of total 0.102041 Percent of bounded 0.102041 + 1 SNES VI Function norm 3.7195e-07 Active lower constraints 45/45 upper constraints 0/0 Percent of total 0.102041 Percent of bounded 0.102041 4 SNES Function norm 3.7195e-07 - 0 SNES VI Function norm 3.719497543884e-07 Active lower constraints 45/45 upper constraints 0/0 Percent of total 0.102041 Percent of bounded 0. - 1 SNES VI Function norm 2.762524667649e-12 Active lower constraints 45/45 upper constraints 0/0 Percent of total 0.102041 Percent of bounded 0. + 0 SNES VI Function norm 3.7195e-07 Active lower constraints 45/45 upper constraints 0/0 Percent of total 0.102041 Percent of bounded 0.102041 + 1 SNES VI Function norm 2.76257e-12 Active lower constraints 45/45 upper constraints 0/0 Percent of total 0.102041 Percent of bounded 0.102041 5 SNES Function norm < 1.e-11 errors: av |u-uexact| = 1.287e-03 |u-uexact|_inf = 7.882e-03 diff --git a/src/snes/examples/tutorials/output/ex9_9.out b/src/snes/examples/tutorials/output/ex9_9.out index ef6570a..77ab4ee 100644 --- a/src/snes/examples/tutorials/output/ex9_9.out +++ b/src/snes/examples/tutorials/output/ex9_9.out @@ -1,21 +1,21 @@ setup done: grid Mx,My = 21,21 with spacing dx,dy = 0.2000,0.2000 0 SNES Function norm 4.16496 - 0 SNES VI Function norm 5.529305066445e+00 Active lower constraints 69/79 upper constraints 0/0 Percent of total 0.156463 Percent of bounded 0. - 1 SNES VI Function norm 6.955134607642e-01 Active lower constraints 57/69 upper constraints 0/0 Percent of total 0.129252 Percent of bounded 0. + 0 SNES VI Function norm 5.52931 Active lower constraints 69/79 upper constraints 0/0 Percent of total 0.156463 Percent of bounded 0.156463 + 1 SNES VI Function norm 0.695513 Active lower constraints 57/69 upper constraints 0/0 Percent of total 0.129252 Percent of bounded 0.129252 1 SNES Function norm 0.708647 - 0 SNES VI Function norm 6.520805467410e-01 Active lower constraints 57/69 upper constraints 0/0 Percent of total 0.129252 Percent of bounded 0. - 1 SNES VI Function norm 2.242111559824e-01 Active lower constraints 49/57 upper constraints 0/0 Percent of total 0.111111 Percent of bounded 0. + 0 SNES VI Function norm 0.652081 Active lower constraints 57/69 upper constraints 0/0 Percent of total 0.129252 Percent of bounded 0.129252 + 1 SNES VI Function norm 0.224211 Active lower constraints 49/57 upper constraints 0/0 Percent of total 0.111111 Percent of bounded 0.111111 2 SNES Function norm 0.759478 - 0 SNES VI Function norm 2.242111559824e-01 Active lower constraints 49/57 upper constraints 0/0 Percent of total 0.111111 Percent of bounded 0. - 1 SNES VI Function norm 8.520960016210e-02 Active lower constraints 45/49 upper constraints 0/0 Percent of total 0.102041 Percent of bounded 0. + 0 SNES VI Function norm 0.224211 Active lower constraints 49/57 upper constraints 0/0 Percent of total 0.111111 Percent of bounded 0.111111 + 1 SNES VI Function norm 0.0852096 Active lower constraints 45/49 upper constraints 0/0 Percent of total 0.102041 Percent of bounded 0.102041 3 SNES Function norm 0.134526 - 0 SNES VI Function norm 1.345259947681e-01 Active lower constraints 45/49 upper constraints 0/0 Percent of total 0.102041 Percent of bounded 0. - 1 SNES VI Function norm 2.347080344381e-07 Active lower constraints 45/45 upper constraints 0/0 Percent of total 0.102041 Percent of bounded 0. + 0 SNES VI Function norm 0.134526 Active lower constraints 45/49 upper constraints 0/0 Percent of total 0.102041 Percent of bounded 0.102041 + 1 SNES VI Function norm 2.34708e-07 Active lower constraints 45/45 upper constraints 0/0 Percent of total 0.102041 Percent of bounded 0.102041 4 SNES Function norm 0.00191518 - 0 SNES VI Function norm 1.915180573496e-03 Active lower constraints 45/45 upper constraints 0/0 Percent of total 0.102041 Percent of bounded 0. - 1 SNES VI Function norm 3.337090244033e-09 Active lower constraints 45/45 upper constraints 0/0 Percent of total 0.102041 Percent of bounded 0. + 0 SNES VI Function norm 0.00191518 Active lower constraints 45/45 upper constraints 0/0 Percent of total 0.102041 Percent of bounded 0.102041 + 1 SNES VI Function norm 3.33709e-09 Active lower constraints 45/45 upper constraints 0/0 Percent of total 0.102041 Percent of bounded 0.102041 5 SNES Function norm 3.82153e-07 - 0 SNES VI Function norm 3.821526562597e-07 Active lower constraints 45/45 upper constraints 0/0 Percent of total 0.102041 Percent of bounded 0. - 1 SNES VI Function norm 7.033950685756e-13 Active lower constraints 45/45 upper constraints 0/0 Percent of total 0.102041 Percent of bounded 0. + 0 SNES VI Function norm 3.82153e-07 Active lower constraints 45/45 upper constraints 0/0 Percent of total 0.102041 Percent of bounded 0.102041 + 1 SNES VI Function norm 7.03211e-13 Active lower constraints 45/45 upper constraints 0/0 Percent of total 0.102041 Percent of bounded 0.102041 6 SNES Function norm < 1.e-11 errors: av |u-uexact| = 1.287e-03 |u-uexact|_inf = 7.882e-03 From it.sadr at gmail.com Wed Jun 22 15:27:05 2016 From: it.sadr at gmail.com (ehsan sadrfaridpour) Date: Wed, 22 Jun 2016 16:27:05 -0400 Subject: [petsc-users] Calculate only the diagonal elements for matrix matrix multiplications Message-ID: Hi, I need the diagonal elements from result of multiplying matrix A, B together. I can get by multiplying the 2 matrices and then call MatGetDiagonal. However, I only need the values on the diagonal and the rest of the elements are useless for me. As the size of matrices increase, I am afraid it affect the performance. So, I am looking for another method that only calculates the diagonal of multiplication and not the rest of elements. If there is not such a method for matrix, how can I use the vector's operations to reach the same results? Best, Ehsan -------------- next part -------------- An HTML attachment was scrubbed... URL: From bsmith at mcs.anl.gov Wed Jun 22 15:34:55 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Wed, 22 Jun 2016 15:34:55 -0500 Subject: [petsc-users] Calculate only the diagonal elements for matrix matrix multiplications In-Reply-To: References: Message-ID: <847D9BE9-FADE-4510-ACC6-E937F9935316@mcs.anl.gov> Matrix A and B, sparse or dense, parallel or sequential? > On Jun 22, 2016, at 3:27 PM, ehsan sadrfaridpour wrote: > > Hi, > I need the diagonal elements from result of multiplying matrix A, B together. > I can get by multiplying the 2 matrices and then call MatGetDiagonal. > However, I only need the values on the diagonal and the rest of the elements are useless for me. > As the size of matrices increase, I am afraid it affect the performance. > > So, I am looking for another method that only calculates the diagonal of multiplication and not the rest of elements. > If there is not such a method for matrix, how can I use the vector's operations to reach the same results? > > > Best, > Ehsan From it.sadr at gmail.com Wed Jun 22 15:41:58 2016 From: it.sadr at gmail.com (ehsan sadrfaridpour) Date: Wed, 22 Jun 2016 16:41:58 -0400 Subject: [petsc-users] Calculate only the diagonal elements for matrix matrix multiplications In-Reply-To: <847D9BE9-FADE-4510-ACC6-E937F9935316@mcs.anl.gov> References: <847D9BE9-FADE-4510-ACC6-E937F9935316@mcs.anl.gov> Message-ID: Now, they are sparse (AIJ) and sequential. But I will upgrade the code to parallel later. On Wed, Jun 22, 2016 at 4:34 PM, Barry Smith wrote: > > Matrix A and B, sparse or dense, parallel or sequential? > > > > On Jun 22, 2016, at 3:27 PM, ehsan sadrfaridpour > wrote: > > > > Hi, > > I need the diagonal elements from result of multiplying matrix A, B > together. > > I can get by multiplying the 2 matrices and then call MatGetDiagonal. > > However, I only need the values on the diagonal and the rest of the > elements are useless for me. > > As the size of matrices increase, I am afraid it affect the performance. > > > > So, I am looking for another method that only calculates the diagonal of > multiplication and not the rest of elements. > > If there is not such a method for matrix, how can I use the vector's > operations to reach the same results? > > > > > > Best, > > Ehsan > > -------------- next part -------------- An HTML attachment was scrubbed... URL: From bsmith at mcs.anl.gov Wed Jun 22 16:01:36 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Wed, 22 Jun 2016 16:01:36 -0500 Subject: [petsc-users] Calculate only the diagonal elements for matrix matrix multiplications In-Reply-To: References: <847D9BE9-FADE-4510-ACC6-E937F9935316@mcs.anl.gov> Message-ID: Say you want to compute the diagonal of A * B where A and B are PETSc SeqAIJ matrices. If we use "MATLAB" notation A(i,:) to represent the ith row of A and B(:,j) to represent the nth column of B then you are computing for each i A(i,:) * B(:,i) that is the ith row of A with the ith column of B. PETSc SeqAIJ matrices are stored "by row" and for each row is stored the column indices of the nonzeros (sorted) and the numerical values for those columns. If the nonzero structure of B is not related to the non-zero structure of A then computing the diagonal is a set of "sparse" vector vector products. Generic sparse vector vector products are never super efficient and to make matters worse with SeqAIJ we don't have stored directly the columns of B (only the rows) If you look at MatMatMult_SeqAIJ_SeqAIJ() you will see we have SIX implementations using different approaches to try to get reasonable performance of the sparse matrix-matrix product. So if this computation of the diagonal is an important kernel in your code (and takes significant time) then you have some work cut out for you to write the appropriate code using the SeqAIJ data structure directly. We don't provide anything out of the box for this computation. I suggest looking at the various approaches for sparse matrix matrix product and see what one looks reasonable to specialize to compute just the diagonal portion. Barry > On Jun 22, 2016, at 3:41 PM, ehsan sadrfaridpour wrote: > > Now, they are sparse (AIJ) and sequential. But I will upgrade the code to parallel later. > > > On Wed, Jun 22, 2016 at 4:34 PM, Barry Smith wrote: > > Matrix A and B, sparse or dense, parallel or sequential? > > > > On Jun 22, 2016, at 3:27 PM, ehsan sadrfaridpour wrote: > > > > Hi, > > I need the diagonal elements from result of multiplying matrix A, B together. > > I can get by multiplying the 2 matrices and then call MatGetDiagonal. > > However, I only need the values on the diagonal and the rest of the elements are useless for me. > > As the size of matrices increase, I am afraid it affect the performance. > > > > So, I am looking for another method that only calculates the diagonal of multiplication and not the rest of elements. > > If there is not such a method for matrix, how can I use the vector's operations to reach the same results? > > > > > > Best, > > Ehsan > > From bourdin at lsu.edu Wed Jun 22 17:08:35 2016 From: bourdin at lsu.edu (Blaise A Bourdin) Date: Wed, 22 Jun 2016 22:08:35 +0000 Subject: [petsc-users] DMPlex hdf5 example Message-ID: Hi, Does anybody have a simple example of HDF5 I/O for transient data with DMPlex? I can?t figure out how to handle time steps: there does not seem to be a way to specify appending time steps when using PetscObjectViewFromOptions, and PetscViewerHDF5PushGroup and seem to not have any effect when viewing a Vec obtained tom a DMPlex. Blaise -- Department of Mathematics and Center for Computation & Technology Louisiana State University, Baton Rouge, LA 70803, USA Tel. +1 (225) 578 1612, Fax +1 (225) 578 4276 http://www.math.lsu.edu/~bourdin From faraz_hussain at yahoo.com Thu Jun 23 08:06:19 2016 From: faraz_hussain at yahoo.com (Faraz Hussain) Date: Thu, 23 Jun 2016 13:06:19 +0000 (UTC) Subject: [petsc-users] Tips on integrating petsc into my application? In-Reply-To: <194924965.7644722.1466606137587.JavaMail.yahoo@mail.yahoo.com> References: <194924965.7644722.1466606137587.JavaMail.yahoo.ref@mail.yahoo.com> <194924965.7644722.1466606137587.JavaMail.yahoo@mail.yahoo.com> Message-ID: <828462341.223968.1466687179220.JavaMail.yahoo@mail.yahoo.com> I have successfully integrated petsc into my application . However, when I do mpiexec -np x, then each process reads my input deck and consumes a lot of memory allocating all the data for the arrays. I believe I need to have only rank 0 do all the processing? What I have tried to do is put a giant if statement in my main function as follows: if (? ! rank ) { run_app(); } However, when I run with more than np > 1, the code just hangs when it gets to the petsc.c code. I moved ? PetscInitializeNoArguments() into my main function. Does it need to be in both main and my petsc.c code? Do I need to pass PETSC_COMM_WORLD to my petsc.c code? From: Faraz Hussain To: "petsc-users at mcs.anl.gov" Sent: Wednesday, June 22, 2016 9:35 AM Subject: Example on using VecGetValues? I am trying to get my petsc vector of values into my c array of doubles. I tried this but it keeps giving value of 0: VecScatter ctx; VecScatterCreateToZero(petsc_x,&ctx,&petsc_b); VecScatterBegin(ctx,petsc_x,petsc_b,INSERT_VALUES,SCATTER_FORWARD); VecScatterEnd(ctx,petsc_x,petsc_b,INSERT_VALUES,SCATTER_FORWARD); VecScatterDestroy(&ctx); VecView( petsc_b,PETSC_VIEWER_STDOUT_WORLD); PetscScalar? value; ? for ( row=0; row < size ; row++ ) { ? ? ? ? ierr = VecGetValues( petsc_b, 0, row, &value );CHKERRQ(ierr); ? ? ? ? b[row] = value; ? ? ? ? printf ( "Value is %.17g\n", b[row]); ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? } It keeps printing this out, but the values should be real numbers, not 0: Value is 0 Value is 0 Value is 0 .... -------------- next part -------------- An HTML attachment was scrubbed... URL: From it.sadr at gmail.com Thu Jun 23 08:21:59 2016 From: it.sadr at gmail.com (ehsan sadrfaridpour) Date: Thu, 23 Jun 2016 09:21:59 -0400 Subject: [petsc-users] Calculate only the diagonal elements for matrix matrix multiplications In-Reply-To: References: <847D9BE9-FADE-4510-ACC6-E937F9935316@mcs.anl.gov> Message-ID: Thanks a lot. Best, Ehsan On Wed, Jun 22, 2016 at 5:01 PM, Barry Smith wrote: > > Say you want to compute the diagonal of A * B where A and B are PETSc > SeqAIJ matrices. If we use "MATLAB" notation A(i,:) to represent the ith > row of A and B(:,j) to represent the nth column of B then you are > computing for each i A(i,:) * B(:,i) that is the ith row of A with the ith > column of B. > > PETSc SeqAIJ matrices are stored "by row" and for each row is stored > the column indices of the nonzeros (sorted) and the numerical values for > those columns. If the nonzero structure of B is not related to the non-zero > structure of A then computing the diagonal is a set of "sparse" vector > vector products. Generic sparse vector vector products are never super > efficient and to make matters worse with SeqAIJ we don't have stored > directly the columns of B (only the rows) > > If you look at MatMatMult_SeqAIJ_SeqAIJ() you will see we have SIX > implementations using different approaches to try to get reasonable > performance of the sparse matrix-matrix product. So if this computation of > the diagonal is an important kernel in your code (and takes significant > time) then you have some work cut out for you to write the appropriate code > using the SeqAIJ data structure directly. We don't provide anything out of > the box for this computation. I suggest looking at the various approaches > for sparse matrix matrix product and see what one looks reasonable to > specialize to compute just the diagonal portion. > > Barry > > > > On Jun 22, 2016, at 3:41 PM, ehsan sadrfaridpour > wrote: > > > > Now, they are sparse (AIJ) and sequential. But I will upgrade the code > to parallel later. > > > > > > On Wed, Jun 22, 2016 at 4:34 PM, Barry Smith wrote: > > > > Matrix A and B, sparse or dense, parallel or sequential? > > > > > > > On Jun 22, 2016, at 3:27 PM, ehsan sadrfaridpour > wrote: > > > > > > Hi, > > > I need the diagonal elements from result of multiplying matrix A, B > together. > > > I can get by multiplying the 2 matrices and then call MatGetDiagonal. > > > However, I only need the values on the diagonal and the rest of the > elements are useless for me. > > > As the size of matrices increase, I am afraid it affect the > performance. > > > > > > So, I am looking for another method that only calculates the diagonal > of multiplication and not the rest of elements. > > > If there is not such a method for matrix, how can I use the vector's > operations to reach the same results? > > > > > > > > > Best, > > > Ehsan > > > > > > -------------- next part -------------- An HTML attachment was scrubbed... URL: From epscodes at gmail.com Thu Jun 23 13:36:45 2016 From: epscodes at gmail.com (Xiangdong) Date: Thu, 23 Jun 2016 14:36:45 -0400 Subject: [petsc-users] snes_type aspin error In-Reply-To: <7977CBE5-33D3-4DA7-82BA-A915F6A2CB26@mcs.anl.gov> References: <7977CBE5-33D3-4DA7-82BA-A915F6A2CB26@mcs.anl.gov> Message-ID: Hi Barry and Matt, The behavior I reported before can be reproduced with snes example ex18. http://www.mcs.anl.gov/petsc/petsc-current/src/snes/examples/tutorials/ex18.c.html ./ex18 -sens_type aspin -snes_fd_color is okay; ./ex18 -snes_type aspin crashes. So there is something messed up in the function FormJacobian(SNES snes,Vec X,Mat jac,Mat jacpre,void *ptr). If the analytical Jacobian is calculated and put into the matrix jac (like ex18.c), the program crash with the aspin option. However, if the same analytical Jacobian is put into jacpre (like ex20.c), it works fine with the aspin option. In general, for the analytical Jacobian, should I put it into jac or jacpre in the FormJaciban() function? Thanks. Best, Xiangdong On Mon, Jun 20, 2016 at 9:51 PM, Barry Smith wrote: > > Could you reproduce the error with a PETSc example or send us the code? > If we can run a code that generates an error then we can debug it and maybe > fix it. If we can't run something with the same error it is hard for us to > fix it. We'd just be making wild guesses. > > Barry > > > On Jun 20, 2016, at 8:06 PM, Xiangdong wrote: > > > > > > > > On Mon, Jun 20, 2016 at 1:02 PM, Barry Smith wrote: > > > > Are you providing a shell matrix to the solver? > > > > No. The matrix (global Jacobian) is setup by MatSetValuesStencil. It > works for the standard newtonls as well as nasm preconditioner. I think the > aspin will assemble the new Jacobian for me based on the information of old > Jacobian. > > > > Do I need to provide something special to use the aspin? > > > > Thanks. > > > > Best, > > Xiangdong > > > > Barry > > > > > On Jun 20, 2016, at 11:32 AM, Xiangdong wrote: > > > > > > Hello everyone, > > > > > > I am trying different snes_type in petsc. The newtonls and nasm all > works well. However, when I switched to aspin, I got the error like "No > support for this operation for this object type" "Mat type shell". I am > using the dmda 3d in petsc 3.6.3. The full error messages are below. > > > > > > Any hint for me to fix this? Thanks. > > > > > > Best, > > > Xiangdong > > > > > > [0]PETSC ERROR: --------------------- Error Message > -------------------------------------------------------------- > > > [0]PETSC ERROR: No support for this operation for this object type > > > [0]PETSC ERROR: Mat type shell > > > [0]PETSC ERROR: See > http://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. > > > [0]PETSC ERROR: Petsc Release Version 3.6.3, unknown > > > [0]PETSC ERROR: #1 MatZeroEntries() line 5404 in > /home/shared/MyLocal_stor/petsc/petsc-dev/src/mat/interface/matrix.c > > > [0]PETSC ERROR: #2 FormJacobianLocal() line 37 in > /home/MyCodes/epscprplus/Jacobian.c > > > [0]PETSC ERROR: #3 SNESComputeJacobian_DMDA() line 175 in > /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/utils/dmdasnes.c > > > [0]PETSC ERROR: #4 SNESComputeJacobian() line 2232 in > /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/interface/snes.c > > > [0]PETSC ERROR: #5 SNESNASMComputeFinalJacobian_Private() line 770 in > /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/impls/nasm/nasm.c > > > [0]PETSC ERROR: #6 SNESSolve_NASM() line 888 in > /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/impls/nasm/nasm.c > > > [0]PETSC ERROR: #7 SNESSolve() line 3906 in > /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/interface/snes.c > > > [0]PETSC ERROR: #8 SNESApplyNPC() line 48 in > /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/interface/snespc.c > > > [0]PETSC ERROR: #9 SNESSolve_NEWTONLS() line 173 in > /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/impls/ls/ls.c > > > [0]PETSC ERROR: #10 SNESSolve() line 3906 in > /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/interface/snes.c > > > [0]PETSC ERROR: #11 main() line 794 in > /home/MyCodes/epscprplus/twophaseow.c > > > > > > > > > -------------- next part -------------- An HTML attachment was scrubbed... URL: From bsmith at mcs.anl.gov Thu Jun 23 16:43:01 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Thu, 23 Jun 2016 16:43:01 -0500 Subject: [petsc-users] snes_type aspin error In-Reply-To: References: <7977CBE5-33D3-4DA7-82BA-A915F6A2CB26@mcs.anl.gov> Message-ID: <7BA7C2E8-91D6-409D-B72F-1D4C912C3D17@mcs.anl.gov> > On Jun 23, 2016, at 1:36 PM, Xiangdong wrote: > > Hi Barry and Matt, > > The behavior I reported before can be reproduced with snes example ex18. > http://www.mcs.anl.gov/petsc/petsc-current/src/snes/examples/tutorials/ex18.c.html > > ./ex18 -sens_type aspin -snes_fd_color is okay; > > ./ex18 -snes_type aspin crashes. > > So there is something messed up in the function FormJacobian(SNES snes,Vec X,Mat jac,Mat jacpre,void *ptr). > > If the analytical Jacobian is calculated and put into the matrix jac (like ex18.c), the program crash with the aspin option. However, if the same analytical Jacobian is put into jacpre (like ex20.c), it works fine with the aspin option. > > In general, for the analytical Jacobian, should I put it into jac or jacpre in the FormJaciban() function? Thanks for figuring this out; it is exactly the problem. When providing explicit Jacobian entries; either analytic or some approximation they should always be set in the second Mat argument the jacpre matrix, not in the first matrix argument. I have fixed ex18.c in the maint branch to use the second matrix argument and now the aspin type runs fine. The reason they should be set in the second argument is that in some circumstances including -snes_mf_operator and with aspin PC internally, in the PETSc solvers, we change the first mat argument to some other form that one cannot set values directly into such as a matrix-free operator or a shell operator. The reason ./ex18 -sens_type aspin -snes_fd_color is okay is because PETSc manages setting the matrix entries when doing the Jacobian with coloring and skips the user provided (in this case wrong) FormJacobian() function. Barry > > Thanks. > > Best, > Xiangdong > > > > > On Mon, Jun 20, 2016 at 9:51 PM, Barry Smith wrote: > > Could you reproduce the error with a PETSc example or send us the code? If we can run a code that generates an error then we can debug it and maybe fix it. If we can't run something with the same error it is hard for us to fix it. We'd just be making wild guesses. > > Barry > > > On Jun 20, 2016, at 8:06 PM, Xiangdong wrote: > > > > > > > > On Mon, Jun 20, 2016 at 1:02 PM, Barry Smith wrote: > > > > Are you providing a shell matrix to the solver? > > > > No. The matrix (global Jacobian) is setup by MatSetValuesStencil. It works for the standard newtonls as well as nasm preconditioner. I think the aspin will assemble the new Jacobian for me based on the information of old Jacobian. > > > > Do I need to provide something special to use the aspin? > > > > Thanks. > > > > Best, > > Xiangdong > > > > Barry > > > > > On Jun 20, 2016, at 11:32 AM, Xiangdong wrote: > > > > > > Hello everyone, > > > > > > I am trying different snes_type in petsc. The newtonls and nasm all works well. However, when I switched to aspin, I got the error like "No support for this operation for this object type" "Mat type shell". I am using the dmda 3d in petsc 3.6.3. The full error messages are below. > > > > > > Any hint for me to fix this? Thanks. > > > > > > Best, > > > Xiangdong > > > > > > [0]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- > > > [0]PETSC ERROR: No support for this operation for this object type > > > [0]PETSC ERROR: Mat type shell > > > [0]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. > > > [0]PETSC ERROR: Petsc Release Version 3.6.3, unknown > > > [0]PETSC ERROR: #1 MatZeroEntries() line 5404 in /home/shared/MyLocal_stor/petsc/petsc-dev/src/mat/interface/matrix.c > > > [0]PETSC ERROR: #2 FormJacobianLocal() line 37 in /home/MyCodes/epscprplus/Jacobian.c > > > [0]PETSC ERROR: #3 SNESComputeJacobian_DMDA() line 175 in /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/utils/dmdasnes.c > > > [0]PETSC ERROR: #4 SNESComputeJacobian() line 2232 in /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/interface/snes.c > > > [0]PETSC ERROR: #5 SNESNASMComputeFinalJacobian_Private() line 770 in /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/impls/nasm/nasm.c > > > [0]PETSC ERROR: #6 SNESSolve_NASM() line 888 in /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/impls/nasm/nasm.c > > > [0]PETSC ERROR: #7 SNESSolve() line 3906 in /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/interface/snes.c > > > [0]PETSC ERROR: #8 SNESApplyNPC() line 48 in /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/interface/snespc.c > > > [0]PETSC ERROR: #9 SNESSolve_NEWTONLS() line 173 in /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/impls/ls/ls.c > > > [0]PETSC ERROR: #10 SNESSolve() line 3906 in /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/interface/snes.c > > > [0]PETSC ERROR: #11 main() line 794 in /home/MyCodes/epscprplus/twophaseow.c > > > > > > > > > From knepley at gmail.com Thu Jun 23 16:48:49 2016 From: knepley at gmail.com (Matthew Knepley) Date: Thu, 23 Jun 2016 14:48:49 -0700 Subject: [petsc-users] snes_type aspin error In-Reply-To: <7BA7C2E8-91D6-409D-B72F-1D4C912C3D17@mcs.anl.gov> References: <7977CBE5-33D3-4DA7-82BA-A915F6A2CB26@mcs.anl.gov> <7BA7C2E8-91D6-409D-B72F-1D4C912C3D17@mcs.anl.gov> Message-ID: On Thu, Jun 23, 2016 at 2:43 PM, Barry Smith wrote: > > > On Jun 23, 2016, at 1:36 PM, Xiangdong wrote: > > > > Hi Barry and Matt, > > > > The behavior I reported before can be reproduced with snes example ex18. > > > http://www.mcs.anl.gov/petsc/petsc-current/src/snes/examples/tutorials/ex18.c.html > > > > ./ex18 -sens_type aspin -snes_fd_color is okay; > > > > ./ex18 -snes_type aspin crashes. > > > > So there is something messed up in the function FormJacobian(SNES > snes,Vec X,Mat jac,Mat jacpre,void *ptr). > > > > If the analytical Jacobian is calculated and put into the matrix jac > (like ex18.c), the program crash with the aspin option. However, if the > same analytical Jacobian is put into jacpre (like ex20.c), it works fine > with the aspin option. > > > > In general, for the analytical Jacobian, should I put it into jac or > jacpre in the FormJaciban() function? > > Thanks for figuring this out; it is exactly the problem. When providing > explicit Jacobian entries; either analytic or some approximation they > should always be set in the second Mat argument the jacpre matrix, not in > the first matrix argument. I have fixed ex18.c in the maint branch to use > the second matrix argument and now the aspin type runs fine. > > The reason they should be set in the second argument is that in some > circumstances including -snes_mf_operator and with aspin PC internally, in > the PETSc solvers, we change the first mat argument to some other form that > one cannot set values directly into such as a matrix-free operator or a > shell operator. > > The reason ./ex18 -sens_type aspin -snes_fd_color is okay is because > PETSc manages setting the matrix entries when doing the Jacobian with > coloring and skips the user provided (in this case wrong) FormJacobian() > function. Should we have an error check for J != P and J a Mat? Matt > > Barry > > > > > Thanks. > > > > Best, > > Xiangdong > > > > > > > > > > On Mon, Jun 20, 2016 at 9:51 PM, Barry Smith wrote: > > > > Could you reproduce the error with a PETSc example or send us the > code? If we can run a code that generates an error then we can debug it and > maybe fix it. If we can't run something with the same error it is hard for > us to fix it. We'd just be making wild guesses. > > > > Barry > > > > > On Jun 20, 2016, at 8:06 PM, Xiangdong wrote: > > > > > > > > > > > > On Mon, Jun 20, 2016 at 1:02 PM, Barry Smith > wrote: > > > > > > Are you providing a shell matrix to the solver? > > > > > > No. The matrix (global Jacobian) is setup by MatSetValuesStencil. It > works for the standard newtonls as well as nasm preconditioner. I think the > aspin will assemble the new Jacobian for me based on the information of old > Jacobian. > > > > > > Do I need to provide something special to use the aspin? > > > > > > Thanks. > > > > > > Best, > > > Xiangdong > > > > > > Barry > > > > > > > On Jun 20, 2016, at 11:32 AM, Xiangdong wrote: > > > > > > > > Hello everyone, > > > > > > > > I am trying different snes_type in petsc. The newtonls and nasm all > works well. However, when I switched to aspin, I got the error like "No > support for this operation for this object type" "Mat type shell". I am > using the dmda 3d in petsc 3.6.3. The full error messages are below. > > > > > > > > Any hint for me to fix this? Thanks. > > > > > > > > Best, > > > > Xiangdong > > > > > > > > [0]PETSC ERROR: --------------------- Error Message > -------------------------------------------------------------- > > > > [0]PETSC ERROR: No support for this operation for this object type > > > > [0]PETSC ERROR: Mat type shell > > > > [0]PETSC ERROR: See > http://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. > > > > [0]PETSC ERROR: Petsc Release Version 3.6.3, unknown > > > > [0]PETSC ERROR: #1 MatZeroEntries() line 5404 in > /home/shared/MyLocal_stor/petsc/petsc-dev/src/mat/interface/matrix.c > > > > [0]PETSC ERROR: #2 FormJacobianLocal() line 37 in > /home/MyCodes/epscprplus/Jacobian.c > > > > [0]PETSC ERROR: #3 SNESComputeJacobian_DMDA() line 175 in > /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/utils/dmdasnes.c > > > > [0]PETSC ERROR: #4 SNESComputeJacobian() line 2232 in > /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/interface/snes.c > > > > [0]PETSC ERROR: #5 SNESNASMComputeFinalJacobian_Private() line 770 > in /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/impls/nasm/nasm.c > > > > [0]PETSC ERROR: #6 SNESSolve_NASM() line 888 in > /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/impls/nasm/nasm.c > > > > [0]PETSC ERROR: #7 SNESSolve() line 3906 in > /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/interface/snes.c > > > > [0]PETSC ERROR: #8 SNESApplyNPC() line 48 in > /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/interface/snespc.c > > > > [0]PETSC ERROR: #9 SNESSolve_NEWTONLS() line 173 in > /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/impls/ls/ls.c > > > > [0]PETSC ERROR: #10 SNESSolve() line 3906 in > /home/shared/MyLocal_stor/petsc/petsc-dev/src/snes/interface/snes.c > > > > [0]PETSC ERROR: #11 main() line 794 in > /home/MyCodes/epscprplus/twophaseow.c > > > > > > > > > > > > > > > > -- What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead. -- Norbert Wiener -------------- next part -------------- An HTML attachment was scrubbed... URL: From epscodes at gmail.com Fri Jun 24 16:17:10 2016 From: epscodes at gmail.com (Xiangdong) Date: Fri, 24 Jun 2016 17:17:10 -0400 Subject: [petsc-users] da_overlap vs width in dmdacreate Message-ID: Hello everyone, I have a quick question. What is the relationship between da_overlap and the width parameter in dmdacreate2d? >From the examples, it seems that width=1 works with da_overlap=4. Could you please explain the relationship or point me to a reference page? Thanks. Xiangdong -------------- next part -------------- An HTML attachment was scrubbed... URL: From bsmith at mcs.anl.gov Fri Jun 24 16:23:58 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Fri, 24 Jun 2016 16:23:58 -0500 Subject: [petsc-users] da_overlap vs width in dmdacreate In-Reply-To: References: Message-ID: <4FDEFD79-5568-4040-A897-A1BCCCD4A5B8@mcs.anl.gov> What arguments are you referring to? PetscErrorCode DMDACreate2d(MPI_Comm comm,DMBoundaryType bx,DMBoundaryType by,DMDAStencilType stencil_type, PetscInt M,PetscInt N,PetscInt m,PetscInt n,PetscInt dof,PetscInt s,const PetscInt lx[],const PetscInt ly[],DM *da) the argument s is the stencil width and depends on the finite difference stencil you want to use. There is no da_overlap argument. Barry > On Jun 24, 2016, at 4:17 PM, Xiangdong wrote: > > Hello everyone, > > I have a quick question. What is the relationship between da_overlap and the width parameter in dmdacreate2d? > > From the examples, it seems that width=1 works with da_overlap=4. Could you please explain the relationship or point me to a reference page? > > Thanks. > > Xiangdong From anto.trande at gmail.com Sat Jun 25 08:21:59 2016 From: anto.trande at gmail.com (Antonio Trande) Date: Sat, 25 Jun 2016 15:21:59 +0200 Subject: [petsc-users] undefined symbol: mpi_init_ Message-ID: Hi all, is it possible to compile serial PETSc library ? I'm trying to compile PETSc without MPI by configuring with options: --with-mpi=0 --with-mpiuni-fortran-binding=0 but compiler uses -I/.../petsc-3.7.2/include/petsc/mpiuni flag anyway and libpetsc.so contains an "undefined symbol": undefined symbol: mpi_init_ (/usr/lib64/libpetsc.so.3.7.2) How I can fix this issue ? Full log: https://copr-be.cloud.fedoraproject.org/results/sagitter/petsc/fedora-24-x86_64/00362302-petsc/build.log.gz -- --- Antonio Trande mailto: sagitter 'at' fedoraproject 'dot' org http://fedoraos.wordpress.com/ https://fedoraproject.org/wiki/User:Sagitter GPG Key: 0x6CE6D08A Check on https://keys.fedoraproject.org/ -------------- next part -------------- A non-text attachment was scrubbed... Name: signature.asc Type: application/pgp-signature Size: 473 bytes Desc: OpenPGP digital signature URL: From knepley at gmail.com Sat Jun 25 08:59:50 2016 From: knepley at gmail.com (Matthew Knepley) Date: Sat, 25 Jun 2016 08:59:50 -0500 Subject: [petsc-users] undefined symbol: mpi_init_ In-Reply-To: References: Message-ID: On Sat, Jun 25, 2016 at 8:21 AM, Antonio Trande wrote: > Hi all, > > is it possible to compile serial PETSc library ? > I'm trying to compile PETSc without MPI by configuring with options: > > --with-mpi=0 --with-mpiuni-fortran-binding=0 > > but compiler uses -I/.../petsc-3.7.2/include/petsc/mpiuni flag anyway > and libpetsc.so contains an "undefined symbol": > > undefined symbol: mpi_init_ (/usr/lib64/libpetsc.so.3.7.2) > > How I can fix this issue ? > Full log: > > https://copr-be.cloud.fedoraproject.org/results/sagitter/petsc/fedora-24-x86_64/00362302-petsc/build.log.gz 1) Why are you giving --with-mpiuni-fortran-binding=0 if you still have Fortran turned on? If you want to turn off Fortran, use --with-fc=0. 2) You did not send configure.log which is what I need, not a screen capture. 3) I cannot see the error you sent anywhere. It would be more useful to send the output from 'make test'. Matt > > -- > --- > Antonio Trande > mailto: sagitter 'at' fedoraproject 'dot' org > http://fedoraos.wordpress.com/ > https://fedoraproject.org/wiki/User:Sagitter > GPG Key: 0x6CE6D08A > Check on https://keys.fedoraproject.org/ > > -- What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead. -- Norbert Wiener -------------- next part -------------- An HTML attachment was scrubbed... URL: From balay at mcs.anl.gov Sat Jun 25 09:05:29 2016 From: balay at mcs.anl.gov (Satish Balay) Date: Sat, 25 Jun 2016 09:05:29 -0500 Subject: [petsc-users] undefined symbol: mpi_init_ In-Reply-To: References: Message-ID: do not use --with-mpiuni-fortran-binding=0 option. It should be used only building PETSc with serial MUMPs package. Satish On Sat, 25 Jun 2016, Antonio Trande wrote: > Hi all, > > is it possible to compile serial PETSc library ? > I'm trying to compile PETSc without MPI by configuring with options: > > --with-mpi=0 --with-mpiuni-fortran-binding=0 > > but compiler uses -I/.../petsc-3.7.2/include/petsc/mpiuni flag anyway > and libpetsc.so contains an "undefined symbol": > > undefined symbol: mpi_init_ (/usr/lib64/libpetsc.so.3.7.2) > > How I can fix this issue ? > Full log: > https://copr-be.cloud.fedoraproject.org/results/sagitter/petsc/fedora-24-x86_64/00362302-petsc/build.log.gz > > From balay at mcs.anl.gov Sat Jun 25 09:18:01 2016 From: balay at mcs.anl.gov (Satish Balay) Date: Sat, 25 Jun 2016 09:18:01 -0500 Subject: [petsc-users] undefined symbol: mpi_init_ In-Reply-To: References: Message-ID: BTW: I see you are building multiple variants of PETSc Wrote: /builddir/build/RPMS/petsc-3.7.2-2.fc24.x86_64.rpm Wrote: /builddir/build/RPMS/petsc-devel-3.7.2-2.fc24.x86_64.rpm Wrote: /builddir/build/RPMS/petsc64-3.7.2-2.fc24.x86_64.rpm Wrote: /builddir/build/RPMS/petsc64-devel-3.7.2-2.fc24.x86_64.rpm Wrote: /builddir/build/RPMS/petsc-openmpi-3.7.2-2.fc24.x86_64.rpm Wrote: /builddir/build/RPMS/petsc-openmpi-devel-3.7.2-2.fc24.x86_64.rpm Wrote: /builddir/build/RPMS/petsc-mpich-3.7.2-2.fc24.x86_64.rpm Wrote: /builddir/build/RPMS/petsc-mpich-devel-3.7.2-2.fc24.x86_64.rpm Wrote: /builddir/build/RPMS/petsc-debuginfo-3.7.2-2.fc24.x86_64.rpm But all of them are using --prefix=/usr. I think you need a different prefix for each of these builds - to be able to install them all.. Satish On Sat, 25 Jun 2016, Satish Balay wrote: > do not use --with-mpiuni-fortran-binding=0 option. > > It should be used only building PETSc with serial MUMPs package. > > Satish > > On Sat, 25 Jun 2016, Antonio Trande wrote: > > > Hi all, > > > > is it possible to compile serial PETSc library ? > > I'm trying to compile PETSc without MPI by configuring with options: > > > > --with-mpi=0 --with-mpiuni-fortran-binding=0 > > > > but compiler uses -I/.../petsc-3.7.2/include/petsc/mpiuni flag anyway > > and libpetsc.so contains an "undefined symbol": > > > > undefined symbol: mpi_init_ (/usr/lib64/libpetsc.so.3.7.2) > > > > How I can fix this issue ? > > Full log: > > https://copr-be.cloud.fedoraproject.org/results/sagitter/petsc/fedora-24-x86_64/00362302-petsc/build.log.gz > > > > > > From anto.trande at gmail.com Sat Jun 25 14:41:54 2016 From: anto.trande at gmail.com (Antonio Trande) Date: Sat, 25 Jun 2016 21:41:54 +0200 Subject: [petsc-users] undefined symbol: mpi_init_ In-Reply-To: References: Message-ID: <2c9fc06c-de3b-f30b-cb68-2b744d6e2bd5@gmail.com> On 06/25/2016 03:59 PM, Matthew Knepley wrote: > On Sat, Jun 25, 2016 at 8:21 AM, Antonio Trande > wrote: > > Hi all, > > is it possible to compile serial PETSc library ? > I'm trying to compile PETSc without MPI by configuring with options: > > --with-mpi=0 --with-mpiuni-fortran-binding=0 > > but compiler uses -I/.../petsc-3.7.2/include/petsc/mpiuni flag anyway > and libpetsc.so contains an "undefined symbol": > > undefined symbol: mpi_init_ (/usr/lib64/libpetsc.so.3.7.2) > > How I can fix this issue ? > Full log: > https://copr-be.cloud.fedoraproject.org/results/sagitter/petsc/fedora-24-x86_64/00362302-petsc/build.log.gz > > > 1) Why are you giving --with-mpiuni-fortran-binding=0 if you still have > Fortran turned on? If you want to turn off Fortran, use --with-fc=0. I did't know what it does. If I active --with-mpiuni-fortran-binding, 'undefined symbol' disappears. > > 2) You did not send configure.log which is what I need, not a screen > capture. > > 3) I cannot see the error you sent anywhere. It would be more useful to > send the output from 'make test'. > > Matt > > I send you all config.log; petsc-serial, petsc-serial (64bit integer), petsc-openmpi and petsc-mpich are compiled from an own fresh source directory, respectively from petsc-3.7.2, build64, buildopenmpi_dir, buildmpich_dir. All libraries look compiled fine and related test passed. I will send you latest builds log from Fedora Copr build-system. -- --- Antonio Trande mailto: sagitter 'at' fedoraproject 'dot' org http://fedoraos.wordpress.com/ https://fedoraproject.org/wiki/User:Sagitter GPG Key: 0x6CE6D08A Check on https://keys.fedoraproject.org/ -------------- next part -------------- A non-text attachment was scrubbed... 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Name: signature.asc Type: application/pgp-signature Size: 473 bytes Desc: OpenPGP digital signature URL: From anto.trande at gmail.com Sat Jun 25 14:45:39 2016 From: anto.trande at gmail.com (Antonio Trande) Date: Sat, 25 Jun 2016 21:45:39 +0200 Subject: [petsc-users] undefined symbol: mpi_init_ In-Reply-To: References: Message-ID: <0570fd85-4918-eedb-7082-9acbafdff951@gmail.com> On 06/25/2016 04:18 PM, Satish Balay wrote: > BTW: I see you are building multiple variants of PETSc > > Wrote: /builddir/build/RPMS/petsc-3.7.2-2.fc24.x86_64.rpm > Wrote: /builddir/build/RPMS/petsc-devel-3.7.2-2.fc24.x86_64.rpm > Wrote: /builddir/build/RPMS/petsc64-3.7.2-2.fc24.x86_64.rpm > Wrote: /builddir/build/RPMS/petsc64-devel-3.7.2-2.fc24.x86_64.rpm > Wrote: /builddir/build/RPMS/petsc-openmpi-3.7.2-2.fc24.x86_64.rpm > Wrote: /builddir/build/RPMS/petsc-openmpi-devel-3.7.2-2.fc24.x86_64.rpm > Wrote: /builddir/build/RPMS/petsc-mpich-3.7.2-2.fc24.x86_64.rpm > Wrote: /builddir/build/RPMS/petsc-mpich-devel-3.7.2-2.fc24.x86_64.rpm > Wrote: /builddir/build/RPMS/petsc-debuginfo-3.7.2-2.fc24.x86_64.rpm > > > But all of them are using --prefix=/usr. I think you need a different > prefix for each of these builds - to be able to install them all.. > > Satish > Why not? All libraries can be installed at the same time: /usr/lib64/openmpi/lib/libpetsc.so.3.7.2 /usr/lib64/libpetsc.so.3.7.2 /usr/lib64/mpich/lib/libpetsc.so.3.7.2 /usr/lib64/libpetsc64.so.3.7.2 -- --- Antonio Trande mailto: sagitter 'at' fedoraproject 'dot' org http://fedoraos.wordpress.com/ https://fedoraproject.org/wiki/User:Sagitter GPG Key: 0x6CE6D08A Check on https://keys.fedoraproject.org/ -------------- next part -------------- A non-text attachment was scrubbed... Name: signature.asc Type: application/pgp-signature Size: 473 bytes Desc: OpenPGP digital signature URL: From anto.trande at gmail.com Sat Jun 25 15:30:42 2016 From: anto.trande at gmail.com (Antonio Trande) Date: Sat, 25 Jun 2016 22:30:42 +0200 Subject: [petsc-users] undefined symbol: mpi_init_ In-Reply-To: <2c9fc06c-de3b-f30b-cb68-2b744d6e2bd5@gmail.com> References: <2c9fc06c-de3b-f30b-cb68-2b744d6e2bd5@gmail.com> Message-ID: On 06/25/2016 09:41 PM, Antonio Trande wrote: > On 06/25/2016 03:59 PM, Matthew Knepley wrote: >> On Sat, Jun 25, 2016 at 8:21 AM, Antonio Trande > > wrote: >> >> Hi all, >> >> is it possible to compile serial PETSc library ? >> I'm trying to compile PETSc without MPI by configuring with options: >> >> --with-mpi=0 --with-mpiuni-fortran-binding=0 >> >> but compiler uses -I/.../petsc-3.7.2/include/petsc/mpiuni flag anyway >> and libpetsc.so contains an "undefined symbol": >> >> undefined symbol: mpi_init_ (/usr/lib64/libpetsc.so.3.7.2) >> >> How I can fix this issue ? >> Full log: >> https://copr-be.cloud.fedoraproject.org/results/sagitter/petsc/fedora-24-x86_64/00362302-petsc/build.log.gz >> >> >> 1) Why are you giving --with-mpiuni-fortran-binding=0 if you still have >> Fortran turned on? If you want to turn off Fortran, use --with-fc=0. > > I did't know what it does. If I active --with-mpiuni-fortran-binding, > 'undefined symbol' disappears. > >> >> 2) You did not send configure.log which is what I need, not a screen >> capture. >> >> 3) I cannot see the error you sent anywhere. It would be more useful to >> send the output from 'make test'. >> >> Matt >> >> > > I send you all config.log; petsc-serial, petsc-serial (64bit integer), > petsc-openmpi and petsc-mpich are compiled from an own fresh source > directory, respectively from petsc-3.7.2, build64, buildopenmpi_dir, > buildmpich_dir. > > All libraries look compiled fine and related test passed. > I will send you latest builds log from Fedora Copr build-system. > No, tests not passed with [0]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, probably memory access out of range This is a build log from Fedora 24 64 bit: https://copr-be.cloud.fedoraproject.org/results/sagitter/petsc/fedora-24-x86_64/00362535-petsc/build.log.gz -- --- Antonio Trande mailto: sagitter 'at' fedoraproject 'dot' org http://fedoraos.wordpress.com/ https://fedoraproject.org/wiki/User:Sagitter GPG Key: 0x6CE6D08A Check on https://keys.fedoraproject.org/ -------------- next part -------------- A non-text attachment was scrubbed... Name: signature.asc Type: application/pgp-signature Size: 473 bytes Desc: OpenPGP digital signature URL: From jychang48 at gmail.com Sat Jun 25 15:31:59 2016 From: jychang48 at gmail.com (Justin Chang) Date: Sat, 25 Jun 2016 22:31:59 +0200 Subject: [petsc-users] SetVariableBounds vs ComputeVariableBounds In-Reply-To: References: Message-ID: Hi all, So I modified SNES ex9.c so that one has the option to use TAO's complementarity solvers for this problem. Attached is the file. I expect the TAO solvers to behave the same as the SNESVI ones, but I am having the same issues as before - SSILS and SSFLS do not work whatsoever but for some reason ASILS and ASFLS work. Although the latter two produce the same results as the SNES VI counterparts, they converge much slower, and something tells me I am not doing something correctly. Based on what I have seen from the two TAO complementarity examples, I would also expect the AS and SS solvers to be roughly the same. BTW, in the modified code, I made some "shortcuts." Instead of explicitly forming the Tao versions of the Gradient and Jacobian, I first assemble the residual r and Jacobian J through the SNESComputeXXX functions. Then I pass them into the TaoSetConstraints and TaoSetJacobian routines. Because this is a linear system, I have: f = r - J*u^0 gradient g = J*u - f = J*(u + *u^0) + r were u^0 is the initial vector. I am not sure if this "shortcut" has anything to do with the issue at hand. Attached is the makefile which has instructions on how to run the problem. Any ideas what is going on?? Thanks! Justin On Wed, Jun 22, 2016 at 9:42 PM, Ed Bueler wrote: > Justin -- > > Yeah, good point. SNESVISetVariableBounds() works fine, at least in ex9.c > (see attached patch). The reason for the other choice, which I found in my > 5 year old email, was some bug in petsc3.2. > > Ed > > Date: Wed, 22 Jun 2016 08:42:33 +0100 >> From: Justin Chang >> To: petsc-users >> Subject: [petsc-users] SetVariableBounds vs ComputeVariableBounds >> >> Hi all, >> >> I am looking at the SNES tutorials ex9.c and ex58.c and am wondering why >> SNESVISetComputeVariableBounds() is called instead of just >> SNESVISetVariableBounds(). When would it be appropriate to use only using >> the latter? >> >> Thanks, >> Justin >> > -------------- next part -------------- An HTML attachment was scrubbed... URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: ex9_TAO.c Type: text/x-csrc Size: 12704 bytes Desc: not available URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: makefile Type: application/octet-stream Size: 708 bytes Desc: not available URL: From epscodes at gmail.com Sat Jun 25 19:18:49 2016 From: epscodes at gmail.com (Xiangdong) Date: Sat, 25 Jun 2016 20:18:49 -0400 Subject: [petsc-users] da_overlap vs width in dmdacreate In-Reply-To: <4FDEFD79-5568-4040-A897-A1BCCCD4A5B8@mcs.anl.gov> References: <4FDEFD79-5568-4040-A897-A1BCCCD4A5B8@mcs.anl.gov> Message-ID: Maybe my previous email is not clear. What is the relationship between the parameter x in DMDASetOverlap and the parameter s in DMDACreate2d? Does x need to be smaller than s? Are they completely independent? PetscErrorCode DMDASetOverlap(DM da,PetscInt x,PetscInt y,PetscInt z) PetscErrorCode DMDACreate2d(MPI_Comm comm,DMBoundaryType bx,DMBoundaryType by,DMDAStencilType stencil_type, PetscInt M,PetscInt N,PetscInt m,PetscInt n,PetscInt dof,PetscInt s,const PetscInt lx[],const PetscInt ly[],DM *da) Thanks. Xiangdong On Fri, Jun 24, 2016 at 5:23 PM, Barry Smith wrote: > > What arguments are you referring to? > > PetscErrorCode DMDACreate2d(MPI_Comm comm,DMBoundaryType > bx,DMBoundaryType by,DMDAStencilType stencil_type, > PetscInt M,PetscInt N,PetscInt m,PetscInt > n,PetscInt dof,PetscInt s,const PetscInt lx[],const PetscInt ly[],DM *da) > > the argument s is the stencil width and depends on the finite difference > stencil you want to use. There is no da_overlap argument. > > Barry > > > On Jun 24, 2016, at 4:17 PM, Xiangdong wrote: > > > > Hello everyone, > > > > I have a quick question. What is the relationship between da_overlap and > the width parameter in dmdacreate2d? > > > > From the examples, it seems that width=1 works with da_overlap=4. Could > you please explain the relationship or point me to a reference page? > > > > Thanks. > > > > Xiangdong > > -------------- next part -------------- An HTML attachment was scrubbed... URL: From balay at mcs.anl.gov Sat Jun 25 19:24:39 2016 From: balay at mcs.anl.gov (Satish Balay) Date: Sat, 25 Jun 2016 19:24:39 -0500 Subject: [petsc-users] undefined symbol: mpi_init_ In-Reply-To: References: <2c9fc06c-de3b-f30b-cb68-2b744d6e2bd5@gmail.com> Message-ID: On Sat, 25 Jun 2016, Antonio Trande wrote: > On 06/25/2016 09:41 PM, Antonio Trande wrote: > > On 06/25/2016 03:59 PM, Matthew Knepley wrote: > >> On Sat, Jun 25, 2016 at 8:21 AM, Antonio Trande >> > wrote: > >> > >> Hi all, > >> > >> is it possible to compile serial PETSc library ? > >> I'm trying to compile PETSc without MPI by configuring with options: > >> > >> --with-mpi=0 --with-mpiuni-fortran-binding=0 > >> > >> but compiler uses -I/.../petsc-3.7.2/include/petsc/mpiuni flag anyway > >> and libpetsc.so contains an "undefined symbol": > >> > >> undefined symbol: mpi_init_ (/usr/lib64/libpetsc.so.3.7.2) > >> > >> How I can fix this issue ? > >> Full log: > >> https://copr-be.cloud.fedoraproject.org/results/sagitter/petsc/fedora-24-x86_64/00362302-petsc/build.log.gz > >> > >> > >> 1) Why are you giving --with-mpiuni-fortran-binding=0 if you still have > >> Fortran turned on? If you want to turn off Fortran, use --with-fc=0. > > > > I did't know what it does. If I active --with-mpiuni-fortran-binding, > > 'undefined symbol' disappears. > > > >> > >> 2) You did not send configure.log which is what I need, not a screen > >> capture. > >> > >> 3) I cannot see the error you sent anywhere. It would be more useful to > >> send the output from 'make test'. > >> > >> Matt > >> > >> > > > > I send you all config.log; petsc-serial, petsc-serial (64bit integer), > > petsc-openmpi and petsc-mpich are compiled from an own fresh source > > directory, respectively from petsc-3.7.2, build64, buildopenmpi_dir, > > buildmpich_dir. > > > > All libraries look compiled fine and related test passed. > > I will send you latest builds log from Fedora Copr build-system. > > > > No, tests not passed with > > [0]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, > probably memory access out of range > > This is a build log from Fedora 24 64 bit: > https://copr-be.cloud.fedoraproject.org/results/sagitter/petsc/fedora-24-x86_64/00362535-petsc/build.log.gz >>>>>>>> + echo 'Patch #1 (petsc-lib64.patch):' + /usr/bin/patch -p0 --fuzz=0 patching file config/BuildSystem/config/setCompilers.py patching file gmakefile Patch #0 (petsc-3.7-no-rpath.patch): + /usr/bin/patch -p0 --fuzz=0 patching file config/BuildSystem/config/setCompilers.py <<<<<<<<<<< Well looks like there were some modifications done to get the 'multi-variant' build working. >>>>>>>>>> + make test -C petsc-3.7.2 make: Entering directory '/builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2' Running test examples to verify correct installation Using PETSC_DIR=/builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2 and PETSC_ARCH=x86_64 *******************Error detected during compile or link!******************* See http://www.mcs.anl.gov/petsc/documentation/faq.html /builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2/src/snes/examples/tutorials ex19 ********************************************************************************* gcc -o ex19.o -c -O2 -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m64 -mtune=generic -fopenmp -I/builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2/include -I/builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2/x86_64/include -I/usr/include -I/usr/include/suitesparse -I/builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2/include/petsc/mpiuni `pwd`/ex19.c gcc -Wl,-z,relro -O2 -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m64 -mtune=generic -fopenmp -o ex19 ex19.o -L/builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2/x86_64/lib -L/builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2/x86_64/lib -lpetsc -lmetis -L/usr/lib64 -lumfpack -lklu -lcholmod -lbtf -lccolamd -lcolamd -lcamd -lamd -lsuitesparseconfig -llapack -lblas -lOpenCL -lhwloc -lpapi -lgmp -lpthread -ljpeg -lpng -lm -L/usr/lib/gcc/x86_64-redhat-linux/6.1.1 -lgfortran -lm -lgfortran -lm -lquadmath -lm -lstdc++ -L/usr/lib/gcc/x86_64-redhat-linux/6.1.1 -ldl -lgcc_s -ldl /usr/bin/rm -f ex19.o Possible error running C/C++ src/snes/examples/tutorials/ex19 with 1 MPI process See http://www.mcs.anl.gov/petsc/documentation/faq.html [0]PETSC ERROR: #1 PetscLogInitialize() line 219 in /builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2/src/sys/logging/plog.c [0]PETSC ERROR: #2 PetscInitialize() line 891 in /builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2/src/sys/objects/pinit.c /usr/bin/sh: line 13: 16933 Aborted (core dumped) <<<<<<<<<< So there is no -rpath here. Which -lpetsc variant is getting used at runtime? Satish From knepley at gmail.com Sat Jun 25 19:56:14 2016 From: knepley at gmail.com (Matthew Knepley) Date: Sat, 25 Jun 2016 19:56:14 -0500 Subject: [petsc-users] da_overlap vs width in dmdacreate In-Reply-To: References: <4FDEFD79-5568-4040-A897-A1BCCCD4A5B8@mcs.anl.gov> Message-ID: On Sat, Jun 25, 2016 at 7:18 PM, Xiangdong wrote: > Maybe my previous email is not clear. What is the relationship between the > parameter x in DMDASetOverlap and the parameter s in DMDACreate2d? Does x > need to be smaller than s? Are they completely independent? > Yes. The Overlaps are only used in decomposing the DA into small blocks for things like block GS and NASM. Thanks, Matt > PetscErrorCode DMDASetOverlap(DM da,PetscInt x,PetscInt y,PetscInt z) > > PetscErrorCode DMDACreate2d(MPI_Comm comm,DMBoundaryType > bx,DMBoundaryType by,DMDAStencilType stencil_type, PetscInt M,PetscInt > N,PetscInt m,PetscInt n,PetscInt dof,PetscInt s,const PetscInt lx[],const > PetscInt ly[],DM *da) > > Thanks. > > Xiangdong > > > On Fri, Jun 24, 2016 at 5:23 PM, Barry Smith wrote: > >> >> What arguments are you referring to? >> >> PetscErrorCode DMDACreate2d(MPI_Comm comm,DMBoundaryType >> bx,DMBoundaryType by,DMDAStencilType stencil_type, >> PetscInt M,PetscInt N,PetscInt m,PetscInt >> n,PetscInt dof,PetscInt s,const PetscInt lx[],const PetscInt ly[],DM *da) >> >> the argument s is the stencil width and depends on the finite difference >> stencil you want to use. There is no da_overlap argument. >> >> Barry >> >> > On Jun 24, 2016, at 4:17 PM, Xiangdong wrote: >> > >> > Hello everyone, >> > >> > I have a quick question. What is the relationship between da_overlap >> and the width parameter in dmdacreate2d? >> > >> > From the examples, it seems that width=1 works with da_overlap=4. Could >> you please explain the relationship or point me to a reference page? >> > >> > Thanks. >> > >> > Xiangdong >> >> > -- What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead. -- Norbert Wiener -------------- next part -------------- An HTML attachment was scrubbed... URL: From bsmith at mcs.anl.gov Sat Jun 25 20:03:54 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Sat, 25 Jun 2016 20:03:54 -0500 Subject: [petsc-users] da_overlap vs width in dmdacreate In-Reply-To: References: <4FDEFD79-5568-4040-A897-A1BCCCD4A5B8@mcs.anl.gov> Message-ID: <31401770-C730-40DC-A643-123801F37C33@mcs.anl.gov> On Jun 25, 2016, at 7:56 PM, Matthew Knepley wrote: > > > On Sat, Jun 25, 2016 at 7:18 PM, Xiangdong wrote: > Maybe my previous email is not clear. What is the relationship between the parameter x in DMDASetOverlap and the parameter s in DMDACreate2d? Does x need to be smaller than s? Are they completely independent? > > Yes. The Overlaps are only used in decomposing the DA into small blocks for things like block GS and NASM. The manual page for DMDASetOverlap() is pitiful, it could at least indicate what this overlap thing is. Even the sentence above has far more information than the manual page but is still completely unclear. > > Thanks, > > Matt > > PetscErrorCode DMDASetOverlap(DM da,PetscInt x,PetscInt y,PetscInt z) > > PetscErrorCode DMDACreate2d(MPI_Comm comm,DMBoundaryType bx,DMBoundaryType by,DMDAStencilType stencil_type, PetscInt M,PetscInt N,PetscInt m,PetscInt n,PetscInt dof,PetscInt s,const PetscInt lx[],const PetscInt ly[],DM *da) > > Thanks. > > Xiangdong > > > On Fri, Jun 24, 2016 at 5:23 PM, Barry Smith wrote: > > What arguments are you referring to? > > PetscErrorCode DMDACreate2d(MPI_Comm comm,DMBoundaryType bx,DMBoundaryType by,DMDAStencilType stencil_type, > PetscInt M,PetscInt N,PetscInt m,PetscInt n,PetscInt dof,PetscInt s,const PetscInt lx[],const PetscInt ly[],DM *da) > > the argument s is the stencil width and depends on the finite difference stencil you want to use. There is no da_overlap argument. > > Barry > > > On Jun 24, 2016, at 4:17 PM, Xiangdong wrote: > > > > Hello everyone, > > > > I have a quick question. What is the relationship between da_overlap and the width parameter in dmdacreate2d? > > > > From the examples, it seems that width=1 works with da_overlap=4. Could you please explain the relationship or point me to a reference page? > > > > Thanks. > > > > Xiangdong > > > > > > -- > What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead. > -- Norbert Wiener From knepley at gmail.com Sat Jun 25 20:06:11 2016 From: knepley at gmail.com (Matthew Knepley) Date: Sat, 25 Jun 2016 20:06:11 -0500 Subject: [petsc-users] da_overlap vs width in dmdacreate In-Reply-To: <31401770-C730-40DC-A643-123801F37C33@mcs.anl.gov> References: <4FDEFD79-5568-4040-A897-A1BCCCD4A5B8@mcs.anl.gov> <31401770-C730-40DC-A643-123801F37C33@mcs.anl.gov> Message-ID: On Sat, Jun 25, 2016 at 8:03 PM, Barry Smith wrote: > > On Jun 25, 2016, at 7:56 PM, Matthew Knepley wrote: > > > > > > On Sat, Jun 25, 2016 at 7:18 PM, Xiangdong wrote: > > Maybe my previous email is not clear. What is the relationship between > the parameter x in DMDASetOverlap and the parameter s in DMDACreate2d? Does > x need to be smaller than s? Are they completely independent? > > > > Yes. The Overlaps are only used in decomposing the DA into small blocks > for things like block GS and NASM. > > The manual page for DMDASetOverlap() is pitiful, it could at least > indicate what this overlap thing is. Even the sentence above has far more > information than the manual page but is still completely unclear. > I agree with you. However, I think most of what Peter did here should be canned. I am trying to rewrite SNES completely to take these things into account (he ignores BCs most of the time, does not interface well with unstructured or SAMR, etc.), but it got bogged down just like me. Matt > > > > Thanks, > > > > Matt > > > > PetscErrorCode DMDASetOverlap(DM da,PetscInt x,PetscInt y,PetscInt z) > > > > PetscErrorCode DMDACreate2d(MPI_Comm comm,DMBoundaryType > bx,DMBoundaryType by,DMDAStencilType stencil_type, PetscInt M,PetscInt > N,PetscInt m,PetscInt n,PetscInt dof,PetscInt s,const PetscInt lx[],const > PetscInt ly[],DM *da) > > > > Thanks. > > > > Xiangdong > > > > > > On Fri, Jun 24, 2016 at 5:23 PM, Barry Smith wrote: > > > > What arguments are you referring to? > > > > PetscErrorCode DMDACreate2d(MPI_Comm comm,DMBoundaryType > bx,DMBoundaryType by,DMDAStencilType stencil_type, > > PetscInt M,PetscInt N,PetscInt m,PetscInt > n,PetscInt dof,PetscInt s,const PetscInt lx[],const PetscInt ly[],DM *da) > > > > the argument s is the stencil width and depends on the finite difference > stencil you want to use. There is no da_overlap argument. > > > > Barry > > > > > On Jun 24, 2016, at 4:17 PM, Xiangdong wrote: > > > > > > Hello everyone, > > > > > > I have a quick question. What is the relationship between da_overlap > and the width parameter in dmdacreate2d? > > > > > > From the examples, it seems that width=1 works with da_overlap=4. > Could you please explain the relationship or point me to a reference page? > > > > > > Thanks. > > > > > > Xiangdong > > > > > > > > > > > > -- > > What most experimenters take for granted before they begin their > experiments is infinitely more interesting than any results to which their > experiments lead. > > -- Norbert Wiener > > -- What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead. -- Norbert Wiener -------------- next part -------------- An HTML attachment was scrubbed... URL: From bsmith at mcs.anl.gov Sat Jun 25 22:03:00 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Sat, 25 Jun 2016 22:03:00 -0500 Subject: [petsc-users] SetVariableBounds vs ComputeVariableBounds In-Reply-To: References: Message-ID: <6CE93113-F59F-4848-B893-4A54B483652A@mcs.anl.gov> I wish I could answer this but I am weak on these algorithms. Hopefully Todd has a good understanding of their application and strengths and weaknesses. Barry > On Jun 25, 2016, at 3:31 PM, Justin Chang wrote: > > Hi all, > > So I modified SNES ex9.c so that one has the option to use TAO's complementarity solvers for this problem. Attached is the file. > > I expect the TAO solvers to behave the same as the SNESVI ones, but I am having the same issues as before - SSILS and SSFLS do not work whatsoever but for some reason ASILS and ASFLS work. Although the latter two produce the same results as the SNES VI counterparts, they converge much slower, and something tells me I am not doing something correctly. Based on what I have seen from the two TAO complementarity examples, I would also expect the AS and SS solvers to be roughly the same. > > BTW, in the modified code, I made some "shortcuts." Instead of explicitly forming the Tao versions of the Gradient and Jacobian, I first assemble the residual r and Jacobian J through the SNESComputeXXX functions. Then I pass them into the TaoSetConstraints and TaoSetJacobian routines. Because this is a linear system, I have: > > f = r - J*u^0 > gradient g = J*u - f = J*(u + *u^0) + r > > were u^0 is the initial vector. I am not sure if this "shortcut" has anything to do with the issue at hand. Attached is the makefile which has instructions on how to run the problem. > > Any ideas what is going on?? > > Thanks! > Justin > > On Wed, Jun 22, 2016 at 9:42 PM, Ed Bueler wrote: > Justin -- > > Yeah, good point. SNESVISetVariableBounds() works fine, at least in ex9.c (see attached patch). The reason for the other choice, which I found in my 5 year old email, was some bug in petsc3.2. > > Ed > > Date: Wed, 22 Jun 2016 08:42:33 +0100 > From: Justin Chang > To: petsc-users > Subject: [petsc-users] SetVariableBounds vs ComputeVariableBounds > > Hi all, > > I am looking at the SNES tutorials ex9.c and ex58.c and am wondering why > SNESVISetComputeVariableBounds() is called instead of just > SNESVISetVariableBounds(). When would it be appropriate to use only using > the latter? > > Thanks, > Justin > > From anto.trande at gmail.com Sun Jun 26 14:32:26 2016 From: anto.trande at gmail.com (Antonio Trande) Date: Sun, 26 Jun 2016 21:32:26 +0200 Subject: [petsc-users] undefined symbol: mpi_init_ In-Reply-To: References: <2c9fc06c-de3b-f30b-cb68-2b744d6e2bd5@gmail.com> Message-ID: On 06/26/2016 02:24 AM, Satish Balay wrote: > On Sat, 25 Jun 2016, Antonio Trande wrote: > >> On 06/25/2016 09:41 PM, Antonio Trande wrote: >>> On 06/25/2016 03:59 PM, Matthew Knepley wrote: >>>> On Sat, Jun 25, 2016 at 8:21 AM, Antonio Trande >>> > wrote: >>>> >>>> Hi all, >>>> >>>> is it possible to compile serial PETSc library ? >>>> I'm trying to compile PETSc without MPI by configuring with options: >>>> >>>> --with-mpi=0 --with-mpiuni-fortran-binding=0 >>>> >>>> but compiler uses -I/.../petsc-3.7.2/include/petsc/mpiuni flag anyway >>>> and libpetsc.so contains an "undefined symbol": >>>> >>>> undefined symbol: mpi_init_ (/usr/lib64/libpetsc.so.3.7.2) >>>> >>>> How I can fix this issue ? >>>> Full log: >>>> https://copr-be.cloud.fedoraproject.org/results/sagitter/petsc/fedora-24-x86_64/00362302-petsc/build.log.gz >>>> >>>> >>>> 1) Why are you giving --with-mpiuni-fortran-binding=0 if you still have >>>> Fortran turned on? If you want to turn off Fortran, use --with-fc=0. >>> >>> I did't know what it does. If I active --with-mpiuni-fortran-binding, >>> 'undefined symbol' disappears. >>> >>>> >>>> 2) You did not send configure.log which is what I need, not a screen >>>> capture. >>>> >>>> 3) I cannot see the error you sent anywhere. It would be more useful to >>>> send the output from 'make test'. >>>> >>>> Matt >>>> >>>> >>> >>> I send you all config.log; petsc-serial, petsc-serial (64bit integer), >>> petsc-openmpi and petsc-mpich are compiled from an own fresh source >>> directory, respectively from petsc-3.7.2, build64, buildopenmpi_dir, >>> buildmpich_dir. >>> >>> All libraries look compiled fine and related test passed. >>> I will send you latest builds log from Fedora Copr build-system. >>> >> >> No, tests not passed with >> >> [0]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, >> probably memory access out of range >> >> This is a build log from Fedora 24 64 bit: >> https://copr-be.cloud.fedoraproject.org/results/sagitter/petsc/fedora-24-x86_64/00362535-petsc/build.log.gz > >>>>>>>>> > + echo 'Patch #1 (petsc-lib64.patch):' > + /usr/bin/patch -p0 --fuzz=0 > patching file config/BuildSystem/config/setCompilers.py > patching file gmakefile > > Patch #0 (petsc-3.7-no-rpath.patch): > + /usr/bin/patch -p0 --fuzz=0 > patching file config/BuildSystem/config/setCompilers.py > <<<<<<<<<<< > > Well looks like there were some modifications done to get the 'multi-variant' build working. Yes. > >>>>>>>>>>> > + make test -C petsc-3.7.2 > make: Entering directory '/builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2' > Running test examples to verify correct installation > Using PETSC_DIR=/builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2 and PETSC_ARCH=x86_64 > *******************Error detected during compile or link!******************* > See http://www.mcs.anl.gov/petsc/documentation/faq.html > /builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2/src/snes/examples/tutorials ex19 > ********************************************************************************* > gcc -o ex19.o -c -O2 -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m64 -mtune=generic -fopenmp -I/builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2/include -I/builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2/x86_64/include -I/usr/include -I/usr/include/suitesparse -I/builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2/include/petsc/mpiuni `pwd`/ex19.c > gcc -Wl,-z,relro -O2 -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m64 -mtune=generic -fopenmp -o ex19 ex19.o -L/builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2/x86_64/lib -L/builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2/x86_64/lib -lpetsc -lmetis -L/usr/lib64 -lumfpack -lklu -lcholmod -lbtf -lccolamd -lcolamd -lcamd -lamd -lsuitesparseconfig -llapack -lblas -lOpenCL -lhwloc -lpapi -lgmp -lpthread -ljpeg -lpng -lm -L/usr/lib/gcc/x86_64-redhat-linux/6.1.1 -lgfortran -lm -lgfortran -lm -lquadmath -lm -lstdc++ -L/usr/lib/gcc/x86_64-redhat-linux/6.1.1 -ldl -lgcc_s -ldl > /usr/bin/rm -f ex19.o > Possible error running C/C++ src/snes/examples/tutorials/ex19 with 1 MPI process > See http://www.mcs.anl.gov/petsc/documentation/faq.html > [0]PETSC ERROR: #1 PetscLogInitialize() line 219 in /builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2/src/sys/logging/plog.c > [0]PETSC ERROR: #2 PetscInitialize() line 891 in /builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2/src/sys/objects/pinit.c > /usr/bin/sh: line 13: 16933 Aborted (core dumped) > <<<<<<<<<< > > So there is no -rpath here. Which -lpetsc variant is getting used at runtime? > Yes, no rpaths for the serial libraries, so 'libpetsc.so' and 'libpetsc64.so' (renamed for mine needs). Test reported is for PETSc (32 bit integer) serial library: libpetsc.so -- --- Antonio Trande mailto: sagitter 'at' fedoraproject 'dot' org http://fedoraos.wordpress.com/ https://fedoraproject.org/wiki/User:Sagitter GPG Key: 0x6CE6D08A Check on https://keys.fedoraproject.org/ -------------- next part -------------- A non-text attachment was scrubbed... Name: signature.asc Type: application/pgp-signature Size: 473 bytes Desc: OpenPGP digital signature URL: From balay at mcs.anl.gov Sun Jun 26 16:25:14 2016 From: balay at mcs.anl.gov (Satish Balay) Date: Sun, 26 Jun 2016 16:25:14 -0500 Subject: [petsc-users] undefined symbol: mpi_init_ In-Reply-To: References: <2c9fc06c-de3b-f30b-cb68-2b744d6e2bd5@gmail.com> Message-ID: On Sun, 26 Jun 2016, Antonio Trande wrote: > On 06/26/2016 02:24 AM, Satish Balay wrote: > > On Sat, 25 Jun 2016, Antonio Trande wrote: > > > >> On 06/25/2016 09:41 PM, Antonio Trande wrote: > >>> On 06/25/2016 03:59 PM, Matthew Knepley wrote: > >>>> On Sat, Jun 25, 2016 at 8:21 AM, Antonio Trande >>>> > wrote: > >>>> > >>>> Hi all, > >>>> > >>>> is it possible to compile serial PETSc library ? > >>>> I'm trying to compile PETSc without MPI by configuring with options: > >>>> > >>>> --with-mpi=0 --with-mpiuni-fortran-binding=0 > >>>> > >>>> but compiler uses -I/.../petsc-3.7.2/include/petsc/mpiuni flag anyway > >>>> and libpetsc.so contains an "undefined symbol": > >>>> > >>>> undefined symbol: mpi_init_ (/usr/lib64/libpetsc.so.3.7.2) > >>>> > >>>> How I can fix this issue ? > >>>> Full log: > >>>> https://copr-be.cloud.fedoraproject.org/results/sagitter/petsc/fedora-24-x86_64/00362302-petsc/build.log.gz > >>>> > >>>> > >>>> 1) Why are you giving --with-mpiuni-fortran-binding=0 if you still have > >>>> Fortran turned on? If you want to turn off Fortran, use --with-fc=0. > >>> > >>> I did't know what it does. If I active --with-mpiuni-fortran-binding, > >>> 'undefined symbol' disappears. > >>> > >>>> > >>>> 2) You did not send configure.log which is what I need, not a screen > >>>> capture. > >>>> > >>>> 3) I cannot see the error you sent anywhere. It would be more useful to > >>>> send the output from 'make test'. > >>>> > >>>> Matt > >>>> > >>>> > >>> > >>> I send you all config.log; petsc-serial, petsc-serial (64bit integer), > >>> petsc-openmpi and petsc-mpich are compiled from an own fresh source > >>> directory, respectively from petsc-3.7.2, build64, buildopenmpi_dir, > >>> buildmpich_dir. > >>> > >>> All libraries look compiled fine and related test passed. > >>> I will send you latest builds log from Fedora Copr build-system. > >>> > >> > >> No, tests not passed with > >> > >> [0]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, > >> probably memory access out of range > >> > >> This is a build log from Fedora 24 64 bit: > >> https://copr-be.cloud.fedoraproject.org/results/sagitter/petsc/fedora-24-x86_64/00362535-petsc/build.log.gz > > > >>>>>>>>> > > + echo 'Patch #1 (petsc-lib64.patch):' > > + /usr/bin/patch -p0 --fuzz=0 > > patching file config/BuildSystem/config/setCompilers.py > > patching file gmakefile > > > > Patch #0 (petsc-3.7-no-rpath.patch): > > + /usr/bin/patch -p0 --fuzz=0 > > patching file config/BuildSystem/config/setCompilers.py > > <<<<<<<<<<< > > > > Well looks like there were some modifications done to get the 'multi-variant' build working. > > Yes. > > > > >>>>>>>>>>> > > + make test -C petsc-3.7.2 > > make: Entering directory '/builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2' > > Running test examples to verify correct installation > > Using PETSC_DIR=/builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2 and PETSC_ARCH=x86_64 > > *******************Error detected during compile or link!******************* > > See http://www.mcs.anl.gov/petsc/documentation/faq.html > > /builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2/src/snes/examples/tutorials ex19 > > ********************************************************************************* > > gcc -o ex19.o -c -O2 -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m64 -mtune=generic -fopenmp -I/builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2/include -I/builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2/x86_64/include -I/usr/include -I/usr/include/suitesparse -I/builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2/include/petsc/mpiuni `pwd`/ex19.c > > gcc -Wl,-z,relro -O2 -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m64 -mtune=generic -fopenmp -o ex19 ex19.o -L/builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2/x86_64/lib -L/builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2/x86_64/lib -lpetsc -lmetis -L/usr/lib64 -lumfpack -lklu -lcholmod -lbtf -lccolamd -lcolamd -lcamd -lamd -lsuitesparseconfig -llapack -lblas -lOpenCL -lhwloc -lpapi -lgmp -lpthread -ljpeg -lpng -lm -L/usr/lib/gcc/x86_64-redhat-linux/6.1.1 -lgfortran -lm -lgfortran -lm -lquadmath -lm -lstdc++ -L/usr/lib/gcc/x86_64-redhat-linux/6.1.1 -ldl -lgcc_s -ldl > > /usr/bin/rm -f ex19.o > > Possible error running C/C++ src/snes/examples/tutorials/ex19 with 1 MPI process > > See http://www.mcs.anl.gov/petsc/documentation/faq.html > > [0]PETSC ERROR: #1 PetscLogInitialize() line 219 in /builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2/src/sys/logging/plog.c > > [0]PETSC ERROR: #2 PetscInitialize() line 891 in /builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2/src/sys/objects/pinit.c > > /usr/bin/sh: line 13: 16933 Aborted (core dumped) > > <<<<<<<<<< > > > > So there is no -rpath here. Which -lpetsc variant is getting used at runtime? > > > > Yes, no rpaths for the serial libraries, so 'libpetsc.so' and > 'libpetsc64.so' (renamed for mine needs). > > Test reported is for PETSc (32 bit integer) serial library: libpetsc.so >>>>>>>>>>>>>>>>>>>>>>>>>>>>> + mkdir -p /builddir/build/BUILDROOT/petsc-3.7.2-2.fc24.x86_64/usr/lib64 /builddir/build/BUILDROOT/petsc-3.7.2-2.fc24.x86_64/usr/share/petsc /builddir/build/BUILDROOT/petsc-3.7.2-2.fc24.x86_64/usr/include/petsc + mkdir -p /builddir/build/BUILDROOT/petsc-3.7.2-2.fc24.x86_64/usr/lib64/gfortran/modules/petsc-3.7.2 /builddir/build/BUILDROOT/petsc-3.7.2-2.fc24.x86_64/usr/share/Modules/modulefiles + install -pm 755 x86_64/lib/libpetsc.so x86_64/lib/libpetsc.so.3.7 x86_64/lib/libpetsc.so.3.7.2 /builddir/build/BUILDROOT/petsc-3.7.2-2.fc24.x86_64/usr/lib64 + umask 022 + cd /builddir/build/BUILD + cd petsc-3.7.2 + export LD_LIBRARY_PATH=/usr/lib64:/builddir/build/BUILDROOT/petsc-3.7.2-2.fc24.x86_64/usr/lib64 + LD_LIBRARY_PATH=/usr/lib64:/builddir/build/BUILDROOT/petsc-3.7.2-2.fc24.x86_64/usr/lib64 + export PETSC_DIR=/builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2 + PETSC_DIR=/builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2 + export PETSC_ARCH=x86_64 + PETSC_ARCH=x86_64 + make test -C petsc-3.7.2 <<<<<<<<<<<<<<<<<<<<<<<<<<<<< Ok - I see libpetsc.so is copied over to /builddir/build/BUILDROOT/petsc-3.7.2-2.fc24.x86_64/usr/lib64. And this path is set in LD_LIBRARY_PATH - so the correct -lpetsc should be found at runtime for 'make test' I attempted to do a build similar to what done here. >>>>>>>>>>>>>>>>>>> $ cat x86_64.py #!/usr/bin/python if __name__ == '__main__': import sys import os sys.path.insert(0, os.path.abspath('config')) import configure configure_options = [ '--prefix=/usr', 'CFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m64 -mtune=generic', 'CXXFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m64 -mtune=generic', 'FFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m64 -mtune=generic', 'LDFLAGS=-Wl,-z,relro -specs=/usr/lib/rpm/redhat/redhat-hardened-ld', '--with-default-arch=0', '--with-make=1', '--with-single-library=1', '--with-precision=double', '--with-petsc-arch=x86_64', '--with-clanguage=C', '--with-shared-libraries=1', '--with-64-bit-indices=0', '--with-fortran-interfaces=1', '--with-windows-graphics=0', '--CC=gcc', '--CXX=g++', '--FC=gfortran', '--with-gnu-compilers=1', '--with-vendor-compilers=0', '--with-shared-ld=ld', '--with-pic=1', '--sharedLibraryFlags=', '--dynamicLibraryFlags=', '--with-cxx-dialect=', '--with-debugging=0', 'COPTFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m64 -mtune=generic', 'CXXOPTFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m64 -mtune=generic', 'FOPTFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m64 -mtune=generic -I/usr/lib64/gfortran/modules', '--with-blas-lib=libblas.so', '--with-lapack-lib=liblapack.so', '--with-blas-lapack-suffix=', '--known-64-bit-blas-indices=0', '--with-mpi=0', '--with-mpiuni-fortran-binding=1', '--with-pthread=1', '--with-valgrind=1', '--with-valgrind-dir=/usr', ] configure.petsc_configure(configure_options) <<<<<<<<<<< $ But I can't reprodue this error - with the above build.. The suggestions I have for debugging are: Somehow get the following through the build - and verify if the includes, libraries are picked up correctly cd src/snes/examples/tutorials make PETSC_DIR=/home/balay/petsc PETSC_ARCH=x86_64 ex19 ldd ex19 |grep libpetsc make PETSC_DIR=/home/balay/petsc PETSC_ARCH=x86_64 ex19.o CFLAGS=-E grep petscconf.h ex19.o Or you could somehow try to do a minimal build - and see if the problem is reproduceable. [say just build 1 variant of PETSc, fewer externalpackages]. BTW: you have: ++ sed -e s/-D_FORTIFY_SOURCE/-D-FORTIFY-SOURCE/g CFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D-FORTIFY-SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m64 -mtune=generic However -Wp,-D-FORTIFY-SOURCE=2 gives me compile errors. $ gcc -Wp,-D-FORTIFY-SOURCE=2 conftest.c :0:1: error: macro names must be identifiers $ Satish From anto.trande at gmail.com Mon Jun 27 04:08:00 2016 From: anto.trande at gmail.com (Antonio Trande) Date: Mon, 27 Jun 2016 11:08:00 +0200 Subject: [petsc-users] undefined symbol: mpi_init_ In-Reply-To: References: <2c9fc06c-de3b-f30b-cb68-2b744d6e2bd5@gmail.com> Message-ID: On 06/26/2016 11:25 PM, Satish Balay wrote: > On Sun, 26 Jun 2016, Antonio Trande wrote: > >> On 06/26/2016 02:24 AM, Satish Balay wrote: >>> On Sat, 25 Jun 2016, Antonio Trande wrote: >>> >>>> On 06/25/2016 09:41 PM, Antonio Trande wrote: >>>>> On 06/25/2016 03:59 PM, Matthew Knepley wrote: >>>>>> On Sat, Jun 25, 2016 at 8:21 AM, Antonio Trande >>>>> > wrote: >>>>>> >>>>>> Hi all, >>>>>> >>>>>> is it possible to compile serial PETSc library ? >>>>>> I'm trying to compile PETSc without MPI by configuring with options: >>>>>> >>>>>> --with-mpi=0 --with-mpiuni-fortran-binding=0 >>>>>> >>>>>> but compiler uses -I/.../petsc-3.7.2/include/petsc/mpiuni flag anyway >>>>>> and libpetsc.so contains an "undefined symbol": >>>>>> >>>>>> undefined symbol: mpi_init_ (/usr/lib64/libpetsc.so.3.7.2) >>>>>> >>>>>> How I can fix this issue ? >>>>>> Full log: >>>>>> https://copr-be.cloud.fedoraproject.org/results/sagitter/petsc/fedora-24-x86_64/00362302-petsc/build.log.gz >>>>>> >>>>>> >>>>>> 1) Why are you giving --with-mpiuni-fortran-binding=0 if you still have >>>>>> Fortran turned on? If you want to turn off Fortran, use --with-fc=0. >>>>> >>>>> I did't know what it does. If I active --with-mpiuni-fortran-binding, >>>>> 'undefined symbol' disappears. >>>>> >>>>>> >>>>>> 2) You did not send configure.log which is what I need, not a screen >>>>>> capture. >>>>>> >>>>>> 3) I cannot see the error you sent anywhere. It would be more useful to >>>>>> send the output from 'make test'. >>>>>> >>>>>> Matt >>>>>> >>>>>> >>>>> >>>>> I send you all config.log; petsc-serial, petsc-serial (64bit integer), >>>>> petsc-openmpi and petsc-mpich are compiled from an own fresh source >>>>> directory, respectively from petsc-3.7.2, build64, buildopenmpi_dir, >>>>> buildmpich_dir. >>>>> >>>>> All libraries look compiled fine and related test passed. >>>>> I will send you latest builds log from Fedora Copr build-system. >>>>> >>>> >>>> No, tests not passed with >>>> >>>> [0]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, >>>> probably memory access out of range >>>> >>>> This is a build log from Fedora 24 64 bit: >>>> https://copr-be.cloud.fedoraproject.org/results/sagitter/petsc/fedora-24-x86_64/00362535-petsc/build.log.gz >>> >>>>>>>>>>> >>> + echo 'Patch #1 (petsc-lib64.patch):' >>> + /usr/bin/patch -p0 --fuzz=0 >>> patching file config/BuildSystem/config/setCompilers.py >>> patching file gmakefile >>> >>> Patch #0 (petsc-3.7-no-rpath.patch): >>> + /usr/bin/patch -p0 --fuzz=0 >>> patching file config/BuildSystem/config/setCompilers.py >>> <<<<<<<<<<< >>> >>> Well looks like there were some modifications done to get the 'multi-variant' build working. >> >> Yes. >> >>> >>>>>>>>>>>>> >>> + make test -C petsc-3.7.2 >>> make: Entering directory '/builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2' >>> Running test examples to verify correct installation >>> Using PETSC_DIR=/builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2 and PETSC_ARCH=x86_64 >>> *******************Error detected during compile or link!******************* >>> See http://www.mcs.anl.gov/petsc/documentation/faq.html >>> /builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2/src/snes/examples/tutorials ex19 >>> ********************************************************************************* >>> gcc -o ex19.o -c -O2 -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m64 -mtune=generic -fopenmp -I/builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2/include -I/builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2/x86_64/include -I/usr/include -I/usr/include/suitesparse -I/builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2/include/petsc/mpiuni `pwd`/ex19.c >>> gcc -Wl,-z,relro -O2 -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m64 -mtune=generic -fopenmp -o ex19 ex19.o -L/builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2/x86_64/lib -L/builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2/x86_64/lib -lpetsc -lmetis -L/usr/lib64 -lumfpack -lklu -lcholmod -lbtf -lccolamd -lcolamd -lcamd -lamd -lsuitesparseconfig -llapack -lblas -lOpenCL -lhwloc -lpapi -lgmp -lpthread -ljpeg -lpng -lm -L/usr/lib/gcc/x86_64-redhat-linux/6.1.1 -lgfortran -lm -lgfortran -lm -lquadmath -lm -lstdc++ -L/usr/lib/gcc/x86_64-redhat-linux/6.1.1 -ldl -lgcc_s -ldl >>> /usr/bin/rm -f ex19.o >>> Possible error running C/C++ src/snes/examples/tutorials/ex19 with 1 MPI process >>> See http://www.mcs.anl.gov/petsc/documentation/faq.html >>> [0]PETSC ERROR: #1 PetscLogInitialize() line 219 in /builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2/src/sys/logging/plog.c >>> [0]PETSC ERROR: #2 PetscInitialize() line 891 in /builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2/src/sys/objects/pinit.c >>> /usr/bin/sh: line 13: 16933 Aborted (core dumped) >>> <<<<<<<<<< >>> >>> So there is no -rpath here. Which -lpetsc variant is getting used at runtime? >>> >> >> Yes, no rpaths for the serial libraries, so 'libpetsc.so' and >> 'libpetsc64.so' (renamed for mine needs). >> >> Test reported is for PETSc (32 bit integer) serial library: libpetsc.so > >>>>>>>>>>>>>>>>>>>>>>>>>>>>>> > > > + mkdir -p /builddir/build/BUILDROOT/petsc-3.7.2-2.fc24.x86_64/usr/lib64 /builddir/build/BUILDROOT/petsc-3.7.2-2.fc24.x86_64/usr/share/petsc /builddir/build/BUILDROOT/petsc-3.7.2-2.fc24.x86_64/usr/include/petsc > + mkdir -p /builddir/build/BUILDROOT/petsc-3.7.2-2.fc24.x86_64/usr/lib64/gfortran/modules/petsc-3.7.2 /builddir/build/BUILDROOT/petsc-3.7.2-2.fc24.x86_64/usr/share/Modules/modulefiles > + install -pm 755 x86_64/lib/libpetsc.so x86_64/lib/libpetsc.so.3.7 x86_64/lib/libpetsc.so.3.7.2 /builddir/build/BUILDROOT/petsc-3.7.2-2.fc24.x86_64/usr/lib64 > > + umask 022 > + cd /builddir/build/BUILD > + cd petsc-3.7.2 > + export LD_LIBRARY_PATH=/usr/lib64:/builddir/build/BUILDROOT/petsc-3.7.2-2.fc24.x86_64/usr/lib64 > + LD_LIBRARY_PATH=/usr/lib64:/builddir/build/BUILDROOT/petsc-3.7.2-2.fc24.x86_64/usr/lib64 > + export PETSC_DIR=/builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2 > + PETSC_DIR=/builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2 > + export PETSC_ARCH=x86_64 > + PETSC_ARCH=x86_64 > + make test -C petsc-3.7.2 > > <<<<<<<<<<<<<<<<<<<<<<<<<<<<< > > Ok - I see libpetsc.so is copied over to > /builddir/build/BUILDROOT/petsc-3.7.2-2.fc24.x86_64/usr/lib64. And > this path is set in LD_LIBRARY_PATH - so the correct -lpetsc should be > found at runtime for 'make test' > > I attempted to do a build similar to what done here. > >>>>>>>>>>>>>>>>>>>> > $ cat x86_64.py > #!/usr/bin/python > if __name__ == '__main__': > import sys > import os > sys.path.insert(0, os.path.abspath('config')) > import configure > configure_options = [ > > '--prefix=/usr', > 'CFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m64 -mtune=generic', > 'CXXFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m64 -mtune=generic', > 'FFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m64 -mtune=generic', > 'LDFLAGS=-Wl,-z,relro -specs=/usr/lib/rpm/redhat/redhat-hardened-ld', > '--with-default-arch=0', > '--with-make=1', > '--with-single-library=1', > '--with-precision=double', > '--with-petsc-arch=x86_64', > '--with-clanguage=C', > '--with-shared-libraries=1', > '--with-64-bit-indices=0', > '--with-fortran-interfaces=1', > '--with-windows-graphics=0', > '--CC=gcc', > '--CXX=g++', > '--FC=gfortran', > '--with-gnu-compilers=1', > '--with-vendor-compilers=0', > '--with-shared-ld=ld', > '--with-pic=1', > '--sharedLibraryFlags=', > '--dynamicLibraryFlags=', > '--with-cxx-dialect=', > '--with-debugging=0', > 'COPTFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m64 -mtune=generic', > 'CXXOPTFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m64 -mtune=generic', > 'FOPTFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m64 -mtune=generic -I/usr/lib64/gfortran/modules', > > '--with-blas-lib=libblas.so', > '--with-lapack-lib=liblapack.so', > '--with-blas-lapack-suffix=', > '--known-64-bit-blas-indices=0', > '--with-mpi=0', > '--with-mpiuni-fortran-binding=1', > '--with-pthread=1', > '--with-valgrind=1', > '--with-valgrind-dir=/usr', > > ] > configure.petsc_configure(configure_options) > > <<<<<<<<<<< > $ > > But I can't reprodue this error - with the above build.. The suggestions I have for debugging are: > > Somehow get the following through the build - and verify if the includes, libraries are picked up correctly > > cd src/snes/examples/tutorials > make PETSC_DIR=/home/balay/petsc PETSC_ARCH=x86_64 ex19 > ldd ex19 |grep libpetsc > > make PETSC_DIR=/home/balay/petsc PETSC_ARCH=x86_64 ex19.o CFLAGS=-E > grep petscconf.h ex19.o > > > > Or you could somehow try to do a minimal build - and see if the problem is reproduceable. > [say just build 1 variant of PETSc, fewer externalpackages]. Just an additional note: changing build-system from Fedora to EPEL7 (http://fedoraproject.org/wiki/EPEL), I do not see any error: https://copr-be.cloud.fedoraproject.org/results/sagitter/petsc/epel-7-x86_64/00362535-petsc/build.log.gz > > BTW: you have: > > ++ sed -e s/-D_FORTIFY_SOURCE/-D-FORTIFY-SOURCE/g > > CFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D-FORTIFY-SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m64 -mtune=generic > > However -Wp,-D-FORTIFY-SOURCE=2 gives me compile errors. > > $ gcc -Wp,-D-FORTIFY-SOURCE=2 conftest.c > :0:1: error: macro names must be identifiers > $ > Yes, PETSc's 'configure' does not like -D_FORTIFY_SOURCE (this flag comes from default compiler flags of Fedora's '%configure' macro), I had to change to -D-FORTIFY-SOURCE; however 'make' command uses -D_FORTIFY_SOURCE without error. -- --- Antonio Trande mailto: sagitter 'at' fedoraproject 'dot' org http://fedoraos.wordpress.com/ https://fedoraproject.org/wiki/User:Sagitter GPG Key: 0x6CE6D08A Check on https://keys.fedoraproject.org/ -------------- next part -------------- A non-text attachment was scrubbed... Name: signature.asc Type: application/pgp-signature Size: 473 bytes Desc: OpenPGP digital signature URL: From constantin.nguyen.van at openmailbox.org Mon Jun 27 07:50:57 2016 From: constantin.nguyen.van at openmailbox.org (Constantin Nguyen Van) Date: Mon, 27 Jun 2016 14:50:57 +0200 Subject: [petsc-users] ISGetTotalIndices with Fortran Message-ID: Hi, I'm tring to use ISGetTotalIndices in a Fortran program but I've got an undefined reference error message when I compile it :"undefined reference to `isgettotalindices_'". I've also tried to replace IsGetIndices by ISGetTotalIndices and also ISGetNonlocalIndices in this example http://www.mcs.anl.gov/petsc/petsc-current/src/vec/is/is/examples/tutorials/ex1f.F.html but the same error occurs. The "nm /lib/libpetsc.so |grep ISGetTotal" command returns "000000000031a7ab T ISGetTotalIndices" so that the symbol is there and nothing seems to be missing. Are those routines available in Fortran? Thank you. Constantin. From anto.trande at gmail.com Mon Jun 27 09:55:53 2016 From: anto.trande at gmail.com (Antonio Trande) Date: Mon, 27 Jun 2016 16:55:53 +0200 Subject: [petsc-users] undefined symbol: mpi_init_ In-Reply-To: References: <2c9fc06c-de3b-f30b-cb68-2b744d6e2bd5@gmail.com> Message-ID: On 06/26/2016 11:25 PM, Satish Balay wrote: > On Sun, 26 Jun 2016, Antonio Trande wrote: >>>> >>>> No, tests not passed with >>>> >>>> [0]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, >>>> probably memory access out of range >>>> >>>> This is a build log from Fedora 24 64 bit: >>>> https://copr-be.cloud.fedoraproject.org/results/sagitter/petsc/fedora-24-x86_64/00362535-petsc/build.log.gz >>> >>>>>>>>>>> >>> + echo 'Patch #1 (petsc-lib64.patch):' >>> + /usr/bin/patch -p0 --fuzz=0 >>> patching file config/BuildSystem/config/setCompilers.py >>> patching file gmakefile >>> >>> Patch #0 (petsc-3.7-no-rpath.patch): >>> + /usr/bin/patch -p0 --fuzz=0 >>> patching file config/BuildSystem/config/setCompilers.py >>> <<<<<<<<<<< >>> >>> Well looks like there were some modifications done to get the 'multi-variant' build working. >> >> Yes. >> >>> >>>>>>>>>>>>> >>> + make test -C petsc-3.7.2 >>> make: Entering directory '/builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2' >>> Running test examples to verify correct installation >>> Using PETSC_DIR=/builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2 and PETSC_ARCH=x86_64 >>> *******************Error detected during compile or link!******************* >>> See http://www.mcs.anl.gov/petsc/documentation/faq.html >>> /builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2/src/snes/examples/tutorials ex19 >>> ********************************************************************************* >>> gcc -o ex19.o -c -O2 -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m64 -mtune=generic -fopenmp -I/builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2/include -I/builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2/x86_64/include -I/usr/include -I/usr/include/suitesparse -I/builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2/include/petsc/mpiuni `pwd`/ex19.c >>> gcc -Wl,-z,relro -O2 -fPIC -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m64 -mtune=generic -fopenmp -o ex19 ex19.o -L/builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2/x86_64/lib -L/builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2/x86_64/lib -lpetsc -lmetis -L/usr/lib64 -lumfpack -lklu -lcholmod -lbtf -lccolamd -lcolamd -lcamd -lamd -lsuitesparseconfig -llapack -lblas -lOpenCL -lhwloc -lpapi -lgmp -lpthread -ljpeg -lpng -lm -L/usr/lib/gcc/x86_64-redhat-linux/6.1.1 -lgfortran -lm -lgfortran -lm -lquadmath -lm -lstdc++ -L/usr/lib/gcc/x86_64-redhat-linux/6.1.1 -ldl -lgcc_s -ldl >>> /usr/bin/rm -f ex19.o >>> Possible error running C/C++ src/snes/examples/tutorials/ex19 with 1 MPI process >>> See http://www.mcs.anl.gov/petsc/documentation/faq.html >>> [0]PETSC ERROR: #1 PetscLogInitialize() line 219 in /builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2/src/sys/logging/plog.c >>> [0]PETSC ERROR: #2 PetscInitialize() line 891 in /builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2/src/sys/objects/pinit.c >>> /usr/bin/sh: line 13: 16933 Aborted (core dumped) >>> <<<<<<<<<< >>> >>> So there is no -rpath here. Which -lpetsc variant is getting used at runtime? >>> >> >> Yes, no rpaths for the serial libraries, so 'libpetsc.so' and >> 'libpetsc64.so' (renamed for mine needs). >> >> Test reported is for PETSc (32 bit integer) serial library: libpetsc.so > >>>>>>>>>>>>>>>>>>>>>>>>>>>>>> > > > + mkdir -p /builddir/build/BUILDROOT/petsc-3.7.2-2.fc24.x86_64/usr/lib64 /builddir/build/BUILDROOT/petsc-3.7.2-2.fc24.x86_64/usr/share/petsc /builddir/build/BUILDROOT/petsc-3.7.2-2.fc24.x86_64/usr/include/petsc > + mkdir -p /builddir/build/BUILDROOT/petsc-3.7.2-2.fc24.x86_64/usr/lib64/gfortran/modules/petsc-3.7.2 /builddir/build/BUILDROOT/petsc-3.7.2-2.fc24.x86_64/usr/share/Modules/modulefiles > + install -pm 755 x86_64/lib/libpetsc.so x86_64/lib/libpetsc.so.3.7 x86_64/lib/libpetsc.so.3.7.2 /builddir/build/BUILDROOT/petsc-3.7.2-2.fc24.x86_64/usr/lib64 > > + umask 022 > + cd /builddir/build/BUILD > + cd petsc-3.7.2 > + export LD_LIBRARY_PATH=/usr/lib64:/builddir/build/BUILDROOT/petsc-3.7.2-2.fc24.x86_64/usr/lib64 > + LD_LIBRARY_PATH=/usr/lib64:/builddir/build/BUILDROOT/petsc-3.7.2-2.fc24.x86_64/usr/lib64 > + export PETSC_DIR=/builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2 > + PETSC_DIR=/builddir/build/BUILD/petsc-3.7.2/petsc-3.7.2 > + export PETSC_ARCH=x86_64 > + PETSC_ARCH=x86_64 > + make test -C petsc-3.7.2 > > <<<<<<<<<<<<<<<<<<<<<<<<<<<<< > > Ok - I see libpetsc.so is copied over to > /builddir/build/BUILDROOT/petsc-3.7.2-2.fc24.x86_64/usr/lib64. And > this path is set in LD_LIBRARY_PATH - so the correct -lpetsc should be > found at runtime for 'make test' > > I attempted to do a build similar to what done here. > >>>>>>>>>>>>>>>>>>>> > $ cat x86_64.py > #!/usr/bin/python > if __name__ == '__main__': > import sys > import os > sys.path.insert(0, os.path.abspath('config')) > import configure > configure_options = [ > > '--prefix=/usr', > 'CFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m64 -mtune=generic', > 'CXXFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m64 -mtune=generic', > 'FFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m64 -mtune=generic', > 'LDFLAGS=-Wl,-z,relro -specs=/usr/lib/rpm/redhat/redhat-hardened-ld', > '--with-default-arch=0', > '--with-make=1', > '--with-single-library=1', > '--with-precision=double', > '--with-petsc-arch=x86_64', > '--with-clanguage=C', > '--with-shared-libraries=1', > '--with-64-bit-indices=0', > '--with-fortran-interfaces=1', > '--with-windows-graphics=0', > '--CC=gcc', > '--CXX=g++', > '--FC=gfortran', > '--with-gnu-compilers=1', > '--with-vendor-compilers=0', > '--with-shared-ld=ld', > '--with-pic=1', > '--sharedLibraryFlags=', > '--dynamicLibraryFlags=', > '--with-cxx-dialect=', > '--with-debugging=0', > 'COPTFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m64 -mtune=generic', > 'CXXOPTFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m64 -mtune=generic', > 'FOPTFLAGS=-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -m64 -mtune=generic -I/usr/lib64/gfortran/modules', > > '--with-blas-lib=libblas.so', > '--with-lapack-lib=liblapack.so', > '--with-blas-lapack-suffix=', > '--known-64-bit-blas-indices=0', > '--with-mpi=0', > '--with-mpiuni-fortran-binding=1', > '--with-pthread=1', > '--with-valgrind=1', > '--with-valgrind-dir=/usr', > > ] > configure.petsc_configure(configure_options) > > <<<<<<<<<<< > $ > > But I can't reprodue this error - with the above build.. The suggestions I have for debugging are: > I have done some tests with a minimal build: the error is confined on 32-bit system. Which PETSc build options work on architecture ? Thanks. -- --- Antonio Trande mailto: sagitter 'at' fedoraproject 'dot' org http://fedoraos.wordpress.com/ https://fedoraproject.org/wiki/User:Sagitter GPG Key: 0x6CE6D08A Check on https://keys.fedoraproject.org/ -------------- next part -------------- A non-text attachment was scrubbed... Name: signature.asc Type: application/pgp-signature Size: 473 bytes Desc: OpenPGP digital signature URL: From jychang48 at gmail.com Mon Jun 27 12:37:38 2016 From: jychang48 at gmail.com (Justin Chang) Date: Mon, 27 Jun 2016 19:37:38 +0200 Subject: [petsc-users] SetVariableBounds vs ComputeVariableBounds In-Reply-To: <6CE93113-F59F-4848-B893-4A54B483652A@mcs.anl.gov> References: <6CE93113-F59F-4848-B893-4A54B483652A@mcs.anl.gov> Message-ID: So I figured it out. I had to explicitly form the Tao Gradient/Constraints and Jacobian. I couldn't just "pre-process" the gradient Vec and Jacobian Mat through SNESComputeXXX. Attached is the updated file and makefile. My question now is, why exactly is this the case? This preprocessing strategy seemed to work for bounded constrained optimization solvers (e.g., TRON/BLMVM) but apparently not with the MCP ones. The system is linear so my original reasoning was that the Jacobian shouldn't change, thus it just needs to be assembled once. I recall faintly from a previous discussion that the SNESVI solvers will vary the Mat and Vec sizes depending on the regions that need to be "constrained" or something? Thanks, Justin On Sun, Jun 26, 2016 at 5:03 AM, Barry Smith wrote: > > I wish I could answer this but I am weak on these algorithms. Hopefully > Todd has a good understanding of their application and strengths and > weaknesses. > > Barry > > > On Jun 25, 2016, at 3:31 PM, Justin Chang wrote: > > > > Hi all, > > > > So I modified SNES ex9.c so that one has the option to use TAO's > complementarity solvers for this problem. Attached is the file. > > > > I expect the TAO solvers to behave the same as the SNESVI ones, but I am > having the same issues as before - SSILS and SSFLS do not work whatsoever > but for some reason ASILS and ASFLS work. Although the latter two produce > the same results as the SNES VI counterparts, they converge much slower, > and something tells me I am not doing something correctly. Based on what I > have seen from the two TAO complementarity examples, I would also expect > the AS and SS solvers to be roughly the same. > > > > BTW, in the modified code, I made some "shortcuts." Instead of > explicitly forming the Tao versions of the Gradient and Jacobian, I first > assemble the residual r and Jacobian J through the SNESComputeXXX > functions. Then I pass them into the TaoSetConstraints and TaoSetJacobian > routines. Because this is a linear system, I have: > > > > f = r - J*u^0 > > gradient g = J*u - f = J*(u + *u^0) + r > > > > were u^0 is the initial vector. I am not sure if this "shortcut" has > anything to do with the issue at hand. Attached is the makefile which has > instructions on how to run the problem. > > > > Any ideas what is going on?? > > > > Thanks! > > Justin > > > > On Wed, Jun 22, 2016 at 9:42 PM, Ed Bueler wrote: > > Justin -- > > > > Yeah, good point. SNESVISetVariableBounds() works fine, at least in > ex9.c (see attached patch). The reason for the other choice, which I found > in my 5 year old email, was some bug in petsc3.2. > > > > Ed > > > > Date: Wed, 22 Jun 2016 08:42:33 +0100 > > From: Justin Chang > > To: petsc-users > > Subject: [petsc-users] SetVariableBounds vs ComputeVariableBounds > > > > Hi all, > > > > I am looking at the SNES tutorials ex9.c and ex58.c and am wondering why > > SNESVISetComputeVariableBounds() is called instead of just > > SNESVISetVariableBounds(). When would it be appropriate to use only using > > the latter? > > > > Thanks, > > Justin > > > > > > -------------- next part -------------- An HTML attachment was scrubbed... URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: ex9_TAO.c Type: text/x-csrc Size: 15008 bytes Desc: not available URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: makefile Type: application/octet-stream Size: 713 bytes Desc: not available URL: From tmunson at mcs.anl.gov Mon Jun 27 13:41:03 2016 From: tmunson at mcs.anl.gov (Munson, Todd) Date: Mon, 27 Jun 2016 18:41:03 +0000 Subject: [petsc-users] SetVariableBounds vs ComputeVariableBounds In-Reply-To: References: <6CE93113-F59F-4848-B893-4A54B483652A@mcs.anl.gov> Message-ID: Hi Justin, I will have to look regarding the TAO semismooth solvers. The TAO solvers probably "cheated" and modified the Jacobian matrix rather than extracting submatrices and shifting the diagonal or using a matrix-free version. Note: the TAO interior-point and semismooth methods start from an element of the generalized Jacobian matrix for a semismooth reformulation of the VI problem. This generalization Jacobian is a diagonal perturbation to a scale version of the Jacobian you input. If we cheat and modify the matrix, then it needs to be filled back in during a Jacobian evaluation. At some point, the plan was to move all the VI methods into PETSc proper, but we may have stopped with the active-set (ASLS) method because that tends to have the best performance for PDE-related problems. Todd. > On Jun 27, 2016, at 12:37 PM, Justin Chang wrote: > > So I figured it out. I had to explicitly form the Tao Gradient/Constraints and Jacobian. I couldn't just "pre-process" the gradient Vec and Jacobian Mat through SNESComputeXXX. Attached is the updated file and makefile. > > My question now is, why exactly is this the case? This preprocessing strategy seemed to work for bounded constrained optimization solvers (e.g., TRON/BLMVM) but apparently not with the MCP ones. The system is linear so my original reasoning was that the Jacobian shouldn't change, thus it just needs to be assembled once. I recall faintly from a previous discussion that the SNESVI solvers will vary the Mat and Vec sizes depending on the regions that need to be "constrained" or something? > > Thanks, > Justin > > On Sun, Jun 26, 2016 at 5:03 AM, Barry Smith wrote: > > I wish I could answer this but I am weak on these algorithms. Hopefully Todd has a good understanding of their application and strengths and weaknesses. > > Barry > > > On Jun 25, 2016, at 3:31 PM, Justin Chang wrote: > > > > Hi all, > > > > So I modified SNES ex9.c so that one has the option to use TAO's complementarity solvers for this problem. Attached is the file. > > > > I expect the TAO solvers to behave the same as the SNESVI ones, but I am having the same issues as before - SSILS and SSFLS do not work whatsoever but for some reason ASILS and ASFLS work. Although the latter two produce the same results as the SNES VI counterparts, they converge much slower, and something tells me I am not doing something correctly. Based on what I have seen from the two TAO complementarity examples, I would also expect the AS and SS solvers to be roughly the same. > > > > BTW, in the modified code, I made some "shortcuts." Instead of explicitly forming the Tao versions of the Gradient and Jacobian, I first assemble the residual r and Jacobian J through the SNESComputeXXX functions. Then I pass them into the TaoSetConstraints and TaoSetJacobian routines. Because this is a linear system, I have: > > > > f = r - J*u^0 > > gradient g = J*u - f = J*(u + *u^0) + r > > > > were u^0 is the initial vector. I am not sure if this "shortcut" has anything to do with the issue at hand. Attached is the makefile which has instructions on how to run the problem. > > > > Any ideas what is going on?? > > > > Thanks! > > Justin > > > > On Wed, Jun 22, 2016 at 9:42 PM, Ed Bueler wrote: > > Justin -- > > > > Yeah, good point. SNESVISetVariableBounds() works fine, at least in ex9.c (see attached patch). The reason for the other choice, which I found in my 5 year old email, was some bug in petsc3.2. > > > > Ed > > > > Date: Wed, 22 Jun 2016 08:42:33 +0100 > > From: Justin Chang > > To: petsc-users > > Subject: [petsc-users] SetVariableBounds vs ComputeVariableBounds > > > > Hi all, > > > > I am looking at the SNES tutorials ex9.c and ex58.c and am wondering why > > SNESVISetComputeVariableBounds() is called instead of just > > SNESVISetVariableBounds(). When would it be appropriate to use only using > > the latter? > > > > Thanks, > > Justin > > > > > > > From epscodes at gmail.com Mon Jun 27 15:15:55 2016 From: epscodes at gmail.com (Xiangdong) Date: Mon, 27 Jun 2016 16:15:55 -0400 Subject: [petsc-users] da_overlap and zero pivot row Message-ID: Hello everyone, I am trying different number of da_overlap to see its effects on nasm and aspin preconditioner. The codes works fine with -da_overlap 0. However, when I change the option -da_overlap 1, it crashed with the error message like "zero pivot row 12544 value 0 tolerance 2.2e-14". The option -pc_factor_nonzeros_along_diagonal does not fix this zero pivot issue. Do you have any quick suggestions for me to try to fix this issue? Thank you. Best, Xiangdong -------------- next part -------------- An HTML attachment was scrubbed... URL: From bsmith at mcs.anl.gov Mon Jun 27 15:19:23 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Mon, 27 Jun 2016 15:19:23 -0500 Subject: [petsc-users] SetVariableBounds vs ComputeVariableBounds In-Reply-To: References: <6CE93113-F59F-4848-B893-4A54B483652A@mcs.anl.gov> Message-ID: There is the same issue with ODE integrators for linear problems. The solvers tromp on the Jacobian. We should actually add an error indicator in these TAO/TS solvers, if the "Jacobian" state value is not increased in the next time step/iteration this means the person did not supply the new Jacobian (in other words the Jacobian is still whatever it was tromped to) so the solver should error out and tell the user their mistake. Barry > On Jun 27, 2016, at 1:41 PM, Munson, Todd wrote: > > > Hi Justin, > > I will have to look regarding the TAO semismooth solvers. The TAO > solvers probably "cheated" and modified the Jacobian matrix rather > than extracting submatrices and shifting the diagonal or using a > matrix-free version. > > Note: the TAO interior-point and semismooth methods start from an element > of the generalized Jacobian matrix for a semismooth reformulation of > the VI problem. This generalization Jacobian is a diagonal > perturbation to a scale version of the Jacobian you input. > If we cheat and modify the matrix, then it needs to be > filled back in during a Jacobian evaluation. > > At some point, the plan was to move all the VI methods into PETSc proper, > but we may have stopped with the active-set (ASLS) method because that > tends to have the best performance for PDE-related problems. > > Todd. > >> On Jun 27, 2016, at 12:37 PM, Justin Chang wrote: >> >> So I figured it out. I had to explicitly form the Tao Gradient/Constraints and Jacobian. I couldn't just "pre-process" the gradient Vec and Jacobian Mat through SNESComputeXXX. Attached is the updated file and makefile. >> >> My question now is, why exactly is this the case? This preprocessing strategy seemed to work for bounded constrained optimization solvers (e.g., TRON/BLMVM) but apparently not with the MCP ones. The system is linear so my original reasoning was that the Jacobian shouldn't change, thus it just needs to be assembled once. I recall faintly from a previous discussion that the SNESVI solvers will vary the Mat and Vec sizes depending on the regions that need to be "constrained" or something? >> >> Thanks, >> Justin >> >> On Sun, Jun 26, 2016 at 5:03 AM, Barry Smith wrote: >> >> I wish I could answer this but I am weak on these algorithms. Hopefully Todd has a good understanding of their application and strengths and weaknesses. >> >> Barry >> >>> On Jun 25, 2016, at 3:31 PM, Justin Chang wrote: >>> >>> Hi all, >>> >>> So I modified SNES ex9.c so that one has the option to use TAO's complementarity solvers for this problem. Attached is the file. >>> >>> I expect the TAO solvers to behave the same as the SNESVI ones, but I am having the same issues as before - SSILS and SSFLS do not work whatsoever but for some reason ASILS and ASFLS work. Although the latter two produce the same results as the SNES VI counterparts, they converge much slower, and something tells me I am not doing something correctly. Based on what I have seen from the two TAO complementarity examples, I would also expect the AS and SS solvers to be roughly the same. >>> >>> BTW, in the modified code, I made some "shortcuts." Instead of explicitly forming the Tao versions of the Gradient and Jacobian, I first assemble the residual r and Jacobian J through the SNESComputeXXX functions. Then I pass them into the TaoSetConstraints and TaoSetJacobian routines. Because this is a linear system, I have: >>> >>> f = r - J*u^0 >>> gradient g = J*u - f = J*(u + *u^0) + r >>> >>> were u^0 is the initial vector. I am not sure if this "shortcut" has anything to do with the issue at hand. Attached is the makefile which has instructions on how to run the problem. >>> >>> Any ideas what is going on?? >>> >>> Thanks! >>> Justin >>> >>> On Wed, Jun 22, 2016 at 9:42 PM, Ed Bueler wrote: >>> Justin -- >>> >>> Yeah, good point. SNESVISetVariableBounds() works fine, at least in ex9.c (see attached patch). The reason for the other choice, which I found in my 5 year old email, was some bug in petsc3.2. >>> >>> Ed >>> >>> Date: Wed, 22 Jun 2016 08:42:33 +0100 >>> From: Justin Chang >>> To: petsc-users >>> Subject: [petsc-users] SetVariableBounds vs ComputeVariableBounds >>> >>> Hi all, >>> >>> I am looking at the SNES tutorials ex9.c and ex58.c and am wondering why >>> SNESVISetComputeVariableBounds() is called instead of just >>> SNESVISetVariableBounds(). When would it be appropriate to use only using >>> the latter? >>> >>> Thanks, >>> Justin >>> >>> >> >> >> > From bsmith at mcs.anl.gov Mon Jun 27 15:21:33 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Mon, 27 Jun 2016 15:21:33 -0500 Subject: [petsc-users] da_overlap and zero pivot row In-Reply-To: References: Message-ID: <3D5D99B8-C21C-4CDA-8C6C-85CA33A386EC@mcs.anl.gov> > On Jun 27, 2016, at 3:15 PM, Xiangdong wrote: > > Hello everyone, > > I am trying different number of da_overlap to see its effects on nasm and aspin preconditioner. The codes works fine with -da_overlap 0. However, when I change the option -da_overlap 1, it crashed with the error message like "zero pivot row 12544 value 0 tolerance 2.2e-14". The option -pc_factor_nonzeros_along_diagonal does not fix this zero pivot issue. > > Do you have any quick suggestions for me to try to fix this issue? My guess is that it is bug in the da_overlap business or in the example; normally I would not expect this to happen. Is this a PETSc example I can run (tell me example and exact options) to reproduce the problem? Thanks Barry > > Thank you. > > Best, > Xiangdong From faraz_hussain at yahoo.com Mon Jun 27 16:44:10 2016 From: faraz_hussain at yahoo.com (Faraz Hussain) Date: Mon, 27 Jun 2016 21:44:10 +0000 (UTC) Subject: [petsc-users] How add arguments with PetscInitializeNoArguments() References: <817978142.2487620.1467063850582.JavaMail.yahoo.ref@mail.yahoo.com> Message-ID: <817978142.2487620.1467063850582.JavaMail.yahoo@mail.yahoo.com> I am using PetscInitializeNoArguments() inside my app. But wanted to add the argument -log_summary and -ksp_monitor_true_residual . Is there a quick way to do with this? I tried doing something like this, but it did not work: PetscInitializeNoArguments(); int argc = 1; char *argv[1]; argv[0] = '-ksp_monitor_true_residual'; From bsmith at mcs.anl.gov Mon Jun 27 16:51:00 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Mon, 27 Jun 2016 16:51:00 -0500 Subject: [petsc-users] How add arguments with PetscInitializeNoArguments() In-Reply-To: <817978142.2487620.1467063850582.JavaMail.yahoo@mail.yahoo.com> References: <817978142.2487620.1467063850582.JavaMail.yahoo.ref@mail.yahoo.com> <817978142.2487620.1467063850582.JavaMail.yahoo@mail.yahoo.com> Message-ID: With PETSc 3.7 you can do PetscOptionsSetValue(NULL, "-log_summary",NULL); etc PetscInitializeNoArguments(); I certainly don't recommend it because it removes the flexibility of changing options at the command line, any time you want to change something you need to recompile. Barry > On Jun 27, 2016, at 4:44 PM, Faraz Hussain wrote: > > I am using PetscInitializeNoArguments() inside my app. But wanted to add the argument -log_summary and -ksp_monitor_true_residual . Is there a quick way to do with this? I tried doing something like this, but it did not work: > > PetscInitializeNoArguments(); > > int argc = 1; > char *argv[1]; > argv[0] = '-ksp_monitor_true_residual'; > From faraz_hussain at yahoo.com Mon Jun 27 17:39:22 2016 From: faraz_hussain at yahoo.com (Faraz Hussain) Date: Mon, 27 Jun 2016 22:39:22 +0000 (UTC) Subject: [petsc-users] Performance of mumps vs. Intel Pardiso References: <184838053.2491784.1467067163032.JavaMail.yahoo.ref@mail.yahoo.com> Message-ID: <184838053.2491784.1467067163032.JavaMail.yahoo@mail.yahoo.com> I am struggling trying to understand why mumps is so much slower than Intel Pardiso solver for my simple test matrix ( 3million^2 sparse symmetrix matrix with ~1000 non-zero entries per line ). My compute nodes have 24 cpus each. Intel Pardiso solves it in in 120 seconds using all 24 cpus of one node. With Mumps I get: 24 cpus - 765 seconds 48 cpus - 401 seconds 72 cpus - 344 seconds beyond 72 cpus no speed improvement. I am attaching the -log_summary to see if there is something wrong in how I am solving the problem. I am really hoping mumps will be faster when using more cpus.. Otherwise I will have to abort my exploration of mumps! -------------- next part -------------- A non-text attachment was scrubbed... Name: log_summary.o265103 Type: application/octet-stream Size: 8902 bytes Desc: not available URL: From jychang48 at gmail.com Mon Jun 27 17:45:18 2016 From: jychang48 at gmail.com (Justin Chang) Date: Tue, 28 Jun 2016 00:45:18 +0200 Subject: [petsc-users] SetVariableBounds vs ComputeVariableBounds In-Reply-To: References: <6CE93113-F59F-4848-B893-4A54B483652A@mcs.anl.gov> Message-ID: Thanks all, Btw, does Tao's Hessian evaluation routines also "cheat" the way the Jacobian routines do? Or is it fine to supply the Hessian only once (assume it is independent of the solution)? Thanks, Justin On Monday, June 27, 2016, Barry Smith wrote: > > There is the same issue with ODE integrators for linear problems. The > solvers tromp on the Jacobian. > > We should actually add an error indicator in these TAO/TS solvers, if > the "Jacobian" state value is not increased in the next time step/iteration > this means the person did not supply the new Jacobian (in other words the > Jacobian is still whatever it was tromped to) so the solver should error > out and tell the user their mistake. > > > Barry > > > > > On Jun 27, 2016, at 1:41 PM, Munson, Todd > wrote: > > > > > > Hi Justin, > > > > I will have to look regarding the TAO semismooth solvers. The TAO > > solvers probably "cheated" and modified the Jacobian matrix rather > > than extracting submatrices and shifting the diagonal or using a > > matrix-free version. > > > > Note: the TAO interior-point and semismooth methods start from an element > > of the generalized Jacobian matrix for a semismooth reformulation of > > the VI problem. This generalization Jacobian is a diagonal > > perturbation to a scale version of the Jacobian you input. > > If we cheat and modify the matrix, then it needs to be > > filled back in during a Jacobian evaluation. > > > > At some point, the plan was to move all the VI methods into PETSc proper, > > but we may have stopped with the active-set (ASLS) method because that > > tends to have the best performance for PDE-related problems. > > > > Todd. > > > >> On Jun 27, 2016, at 12:37 PM, Justin Chang > wrote: > >> > >> So I figured it out. I had to explicitly form the Tao > Gradient/Constraints and Jacobian. I couldn't just "pre-process" the > gradient Vec and Jacobian Mat through SNESComputeXXX. Attached is the > updated file and makefile. > >> > >> My question now is, why exactly is this the case? This preprocessing > strategy seemed to work for bounded constrained optimization solvers (e.g., > TRON/BLMVM) but apparently not with the MCP ones. The system is linear so > my original reasoning was that the Jacobian shouldn't change, thus it just > needs to be assembled once. I recall faintly from a previous discussion > that the SNESVI solvers will vary the Mat and Vec sizes depending on the > regions that need to be "constrained" or something? > >> > >> Thanks, > >> Justin > >> > >> On Sun, Jun 26, 2016 at 5:03 AM, Barry Smith > wrote: > >> > >> I wish I could answer this but I am weak on these algorithms. > Hopefully Todd has a good understanding of their application and strengths > and weaknesses. > >> > >> Barry > >> > >>> On Jun 25, 2016, at 3:31 PM, Justin Chang > wrote: > >>> > >>> Hi all, > >>> > >>> So I modified SNES ex9.c so that one has the option to use TAO's > complementarity solvers for this problem. Attached is the file. > >>> > >>> I expect the TAO solvers to behave the same as the SNESVI ones, but I > am having the same issues as before - SSILS and SSFLS do not work > whatsoever but for some reason ASILS and ASFLS work. Although the latter > two produce the same results as the SNES VI counterparts, they converge > much slower, and something tells me I am not doing something correctly. > Based on what I have seen from the two TAO complementarity examples, I > would also expect the AS and SS solvers to be roughly the same. > >>> > >>> BTW, in the modified code, I made some "shortcuts." Instead of > explicitly forming the Tao versions of the Gradient and Jacobian, I first > assemble the residual r and Jacobian J through the SNESComputeXXX > functions. Then I pass them into the TaoSetConstraints and TaoSetJacobian > routines. Because this is a linear system, I have: > >>> > >>> f = r - J*u^0 > >>> gradient g = J*u - f = J*(u + *u^0) + r > >>> > >>> were u^0 is the initial vector. I am not sure if this "shortcut" has > anything to do with the issue at hand. Attached is the makefile which has > instructions on how to run the problem. > >>> > >>> Any ideas what is going on?? > >>> > >>> Thanks! > >>> Justin > >>> > >>> On Wed, Jun 22, 2016 at 9:42 PM, Ed Bueler > wrote: > >>> Justin -- > >>> > >>> Yeah, good point. SNESVISetVariableBounds() works fine, at least in > ex9.c (see attached patch). The reason for the other choice, which I found > in my 5 year old email, was some bug in petsc3.2. > >>> > >>> Ed > >>> > >>> Date: Wed, 22 Jun 2016 08:42:33 +0100 > >>> From: Justin Chang > > >>> To: petsc-users > > >>> Subject: [petsc-users] SetVariableBounds vs ComputeVariableBounds > >>> > >>> Hi all, > >>> > >>> I am looking at the SNES tutorials ex9.c and ex58.c and am wondering > why > >>> SNESVISetComputeVariableBounds() is called instead of just > >>> SNESVISetVariableBounds(). When would it be appropriate to use only > using > >>> the latter? > >>> > >>> Thanks, > >>> Justin > >>> > >>> > >> > >> > >> > > > > -------------- next part -------------- An HTML attachment was scrubbed... URL: From bsmith at mcs.anl.gov Mon Jun 27 17:50:48 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Mon, 27 Jun 2016 17:50:48 -0500 Subject: [petsc-users] Performance of mumps vs. Intel Pardiso In-Reply-To: <184838053.2491784.1467067163032.JavaMail.yahoo@mail.yahoo.com> References: <184838053.2491784.1467067163032.JavaMail.yahoo.ref@mail.yahoo.com> <184838053.2491784.1467067163032.JavaMail.yahoo@mail.yahoo.com> Message-ID: <5B85F3C2-56D4-4E85-84BB-FF7907CC3CD2@mcs.anl.gov> These are the only lines that matter MatSolve 1 1.0 7.7200e+00 1.1 0.00e+00 0.0 2.6e+03 2.0e+04 3.0e+00 1 0 68 2 9 1 0 68 2 9 0 MatCholFctrSym 1 1.0 1.8439e+02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 5.0e+00 29 0 0 0 15 29 0 0 0 15 0 MatCholFctrNum 1 1.0 3.3969e+02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 53 0 0 0 0 53 0 0 0 0 0 look at the log summary for 24 and 48 processes. How are the symbolic and numeric parts scaling with the number of processes? Things that could affect the performance a lot. Is the symbolic factorization done in parallel? What reordering is used? If Pardiso is using a reordering that is better for this matrix and has (much) lower fill that could explain why it is so much faster. Perhaps correspond with the MUMPS developers on what MUMPS options might make it faster Barry > On Jun 27, 2016, at 5:39 PM, Faraz Hussain wrote: > > I am struggling trying to understand why mumps is so much slower than Intel Pardiso solver for my simple test matrix ( 3million^2 sparse symmetrix matrix with ~1000 non-zero entries per line ). > > My compute nodes have 24 cpus each. Intel Pardiso solves it in in 120 seconds using all 24 cpus of one node. With Mumps I get: > > 24 cpus - 765 seconds > 48 cpus - 401 seconds > 72 cpus - 344 seconds > beyond 72 cpus no speed improvement. > > I am attaching the -log_summary to see if there is something wrong in how I am solving the problem. I am really hoping mumps will be faster when using more cpus.. Otherwise I will have to abort my exploration of mumps! From bsmith at mcs.anl.gov Mon Jun 27 17:52:47 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Mon, 27 Jun 2016 17:52:47 -0500 Subject: [petsc-users] SetVariableBounds vs ComputeVariableBounds In-Reply-To: References: <6CE93113-F59F-4848-B893-4A54B483652A@mcs.anl.gov> Message-ID: <1B7FA58C-CC10-4756-8220-36348736FD64@mcs.anl.gov> > On Jun 27, 2016, at 5:45 PM, Justin Chang wrote: > > Thanks all, > > Btw, does Tao's Hessian evaluation routines also "cheat" the way the Jacobian routines do? Or is it fine to supply the Hessian only once (assume it is independent of the solution)? It is likely dependent on the specific solver one uses. That is why it would be a good idea for all the PETSc/Tao codes that "cheat" to properly detect the problem instead of generating confusing garbage. Barry > > Thanks, > Justin > > On Monday, June 27, 2016, Barry Smith wrote: > > There is the same issue with ODE integrators for linear problems. The solvers tromp on the Jacobian. > > We should actually add an error indicator in these TAO/TS solvers, if the "Jacobian" state value is not increased in the next time step/iteration this means the person did not supply the new Jacobian (in other words the Jacobian is still whatever it was tromped to) so the solver should error out and tell the user their mistake. > > > Barry > > > > > On Jun 27, 2016, at 1:41 PM, Munson, Todd wrote: > > > > > > Hi Justin, > > > > I will have to look regarding the TAO semismooth solvers. The TAO > > solvers probably "cheated" and modified the Jacobian matrix rather > > than extracting submatrices and shifting the diagonal or using a > > matrix-free version. > > > > Note: the TAO interior-point and semismooth methods start from an element > > of the generalized Jacobian matrix for a semismooth reformulation of > > the VI problem. This generalization Jacobian is a diagonal > > perturbation to a scale version of the Jacobian you input. > > If we cheat and modify the matrix, then it needs to be > > filled back in during a Jacobian evaluation. > > > > At some point, the plan was to move all the VI methods into PETSc proper, > > but we may have stopped with the active-set (ASLS) method because that > > tends to have the best performance for PDE-related problems. > > > > Todd. > > > >> On Jun 27, 2016, at 12:37 PM, Justin Chang wrote: > >> > >> So I figured it out. I had to explicitly form the Tao Gradient/Constraints and Jacobian. I couldn't just "pre-process" the gradient Vec and Jacobian Mat through SNESComputeXXX. Attached is the updated file and makefile. > >> > >> My question now is, why exactly is this the case? This preprocessing strategy seemed to work for bounded constrained optimization solvers (e.g., TRON/BLMVM) but apparently not with the MCP ones. The system is linear so my original reasoning was that the Jacobian shouldn't change, thus it just needs to be assembled once. I recall faintly from a previous discussion that the SNESVI solvers will vary the Mat and Vec sizes depending on the regions that need to be "constrained" or something? > >> > >> Thanks, > >> Justin > >> > >> On Sun, Jun 26, 2016 at 5:03 AM, Barry Smith wrote: > >> > >> I wish I could answer this but I am weak on these algorithms. Hopefully Todd has a good understanding of their application and strengths and weaknesses. > >> > >> Barry > >> > >>> On Jun 25, 2016, at 3:31 PM, Justin Chang wrote: > >>> > >>> Hi all, > >>> > >>> So I modified SNES ex9.c so that one has the option to use TAO's complementarity solvers for this problem. Attached is the file. > >>> > >>> I expect the TAO solvers to behave the same as the SNESVI ones, but I am having the same issues as before - SSILS and SSFLS do not work whatsoever but for some reason ASILS and ASFLS work. Although the latter two produce the same results as the SNES VI counterparts, they converge much slower, and something tells me I am not doing something correctly. Based on what I have seen from the two TAO complementarity examples, I would also expect the AS and SS solvers to be roughly the same. > >>> > >>> BTW, in the modified code, I made some "shortcuts." Instead of explicitly forming the Tao versions of the Gradient and Jacobian, I first assemble the residual r and Jacobian J through the SNESComputeXXX functions. Then I pass them into the TaoSetConstraints and TaoSetJacobian routines. Because this is a linear system, I have: > >>> > >>> f = r - J*u^0 > >>> gradient g = J*u - f = J*(u + *u^0) + r > >>> > >>> were u^0 is the initial vector. I am not sure if this "shortcut" has anything to do with the issue at hand. Attached is the makefile which has instructions on how to run the problem. > >>> > >>> Any ideas what is going on?? > >>> > >>> Thanks! > >>> Justin > >>> > >>> On Wed, Jun 22, 2016 at 9:42 PM, Ed Bueler wrote: > >>> Justin -- > >>> > >>> Yeah, good point. SNESVISetVariableBounds() works fine, at least in ex9.c (see attached patch). The reason for the other choice, which I found in my 5 year old email, was some bug in petsc3.2. > >>> > >>> Ed > >>> > >>> Date: Wed, 22 Jun 2016 08:42:33 +0100 > >>> From: Justin Chang > >>> To: petsc-users > >>> Subject: [petsc-users] SetVariableBounds vs ComputeVariableBounds > >>> > >>> Hi all, > >>> > >>> I am looking at the SNES tutorials ex9.c and ex58.c and am wondering why > >>> SNESVISetComputeVariableBounds() is called instead of just > >>> SNESVISetVariableBounds(). When would it be appropriate to use only using > >>> the latter? > >>> > >>> Thanks, > >>> Justin > >>> > >>> > >> > >> > >> > > > From a.croucher at auckland.ac.nz Mon Jun 27 18:18:34 2016 From: a.croucher at auckland.ac.nz (Adrian Croucher) Date: Tue, 28 Jun 2016 11:18:34 +1200 Subject: [petsc-users] DMPlex hdf5 example Message-ID: hi > Does anybody have a simple example of HDF5 I/O for transient data with DMPlex? > I can?t figure out how to handle time steps: there does not seem to be a way to specify appending time steps when using PetscObjectViewFromOptions, and PetscViewerHDF5PushGroup and seem to not have any effect when viewing a Vec obtained tom a DMPlex. I've done this, based on what's done in the Vec tutorial example ex19.c. But to get the timesteps to work properly with DMPlex I replaced the PetscViewerHDF5SetTimestep() call with DMSetOutputSequenceNumber(). See thread here: http://lists.mcs.anl.gov/pipermail/petsc-users/2015-October/027353.html - Adrian -- Dr Adrian Croucher Senior Research Fellow Department of Engineering Science University of Auckland, New Zealand email: a.croucher at auckland.ac.nz tel: +64 (0)9 923 84611 -------------- next part -------------- An HTML attachment was scrubbed... URL: From faraz_hussain at yahoo.com Mon Jun 27 19:59:39 2016 From: faraz_hussain at yahoo.com (Faraz Hussain) Date: Tue, 28 Jun 2016 00:59:39 +0000 (UTC) Subject: [petsc-users] Performance of mumps vs. Intel Pardiso References: <1337334190.2752078.1467075579364.JavaMail.yahoo.ref@mail.yahoo.com> Message-ID: <1337334190.2752078.1467075579364.JavaMail.yahoo@mail.yahoo.com> Thanks for the quick response. Here are the log_summary for 24, 48 and 72 cpus: 24 cpus ====== MatSolve 1 1.0 1.8100e+00 1.0 0.00e+00 0.0 7.0e+02 7.4e+04 3.0e+00 0 0 68 3 9 0 0 68 3 9 0 MatCholFctrSym 1 1.0 4.6683e+01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 5.0e+00 6 0 0 0 15 6 0 0 0 15 0 MatCholFctrNum 1 1.0 5.8129e+02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 78 0 0 0 0 78 0 0 0 0 0 48 cpus ====== MatSolve 1 1.0 1.4915e+00 1.0 0.00e+00 0.0 1.6e+03 3.3e+04 3.0e+00 0 0 68 3 9 0 0 68 3 9 0 MatCholFctrSym 1 1.0 5.3486e+01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 5.0e+00 9 0 0 0 15 9 0 0 0 15 0 MatCholFctrNum 1 1.0 4.0803e+02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 71 0 0 0 0 71 0 0 0 0 0 72 cpus ====== MatSolve 1 1.0 7.7200e+00 1.1 0.00e+00 0.0 2.6e+03 2.0e+04 3.0e+00 1 0 68 2 9 1 0 68 2 9 0 MatCholFctrSym 1 1.0 1.8439e+02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 5.0e+00 29 0 0 0 15 29 0 0 0 15 0 MatCholFctrNum 1 1.0 3.3969e+02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 53 0 0 0 0 53 0 0 0 0 0 Does this look normal or is something off here? Regarding reordering algorithm of Pardiso. At this time I do not know much about that. I will do some research and see what I can learn. However, I believe Mumps only has two options: -mat_mumps_icntl_29 - ICNTL(29): parallel ordering 1 = ptscotch, 2 = parmetis I have tried both and do not see any speed difference. Or are you referring to some other kind of reordering? -------------------------------------------- On Mon, 6/27/16, Barry Smith wrote: Subject: Re: [petsc-users] Performance of mumps vs. Intel Pardiso To: "Faraz Hussain" Cc: "petsc-users at mcs.anl.gov" Date: Monday, June 27, 2016, 5:50 PM ???These are the only lines that matter MatSolve? ? ? ? ? ? ? ? ? ???1 1.0 7.7200e+00 1.1 0.00e+00 0.0 2.6e+03 2.0e+04 3.0e+00? 1? 0 68? 2? 9???1? 0 68? 2? 9? ???0 MatCholFctrSym? ? ? ???1 1.0 1.8439e+02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 5.0e+00 29? 0? 0? 0 15? 29? 0? 0? 0 15? ???0 MatCholFctrNum? ? ? ???1 1.0 3.3969e+02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 53? 0? 0? 0? 0? 53? 0? 0? 0? 0? ???0 look at the log summary for 24 and 48 processes. How are the symbolic and numeric parts scaling with the number of processes? Things that could affect the performance a lot. Is the symbolic factorization done in parallel? What reordering is used? If Pardiso is using a reordering that is better for this matrix and has (much) lower fill that could explain why it is so much faster. Perhaps correspond with the MUMPS developers on what MUMPS options might make it faster ? Barry > On Jun 27, 2016, at 5:39 PM, Faraz Hussain wrote: > > I am struggling trying to understand why mumps is so much slower than Intel Pardiso solver for my simple test matrix ( 3million^2 sparse symmetrix matrix with ~1000 non-zero entries per line ). > > My compute nodes have 24 cpus each. Intel Pardiso solves it in in 120 seconds using all 24 cpus of one node. With Mumps I get: > > 24 cpus - 765 seconds > 48 cpus - 401 seconds > 72 cpus - 344 seconds > beyond 72 cpus no speed improvement. > > I am attaching the -log_summary to see if there is something wrong in how I am solving the problem. I am really hoping mumps will be faster when using more cpus.. Otherwise I will have to abort my exploration of mumps! From tmunson at mcs.anl.gov Mon Jun 27 20:03:11 2016 From: tmunson at mcs.anl.gov (Munson, Todd) Date: Tue, 28 Jun 2016 01:03:11 +0000 Subject: [petsc-users] SetVariableBounds vs ComputeVariableBounds In-Reply-To: References: <6CE93113-F59F-4848-B893-4A54B483652A@mcs.anl.gov> Message-ID: <55A01EF2-6B2D-4F0E-B0C3-41BCECB46D1D@mcs.anl.gov> I think it depends on the method. BLMVM is okay; its only using the gradient and not the Hessian. TRON might be okay as well, but I would have to check; it should extract a sub matrix. Todd. > On Jun 27, 2016, at 5:45 PM, Justin Chang wrote: > > Thanks all, > > Btw, does Tao's Hessian evaluation routines also "cheat" the way the Jacobian routines do? Or is it fine to supply the Hessian only once (assume it is independent of the solution)? > > Thanks, > Justin > > On Monday, June 27, 2016, Barry Smith wrote: > > There is the same issue with ODE integrators for linear problems. The solvers tromp on the Jacobian. > > We should actually add an error indicator in these TAO/TS solvers, if the "Jacobian" state value is not increased in the next time step/iteration this means the person did not supply the new Jacobian (in other words the Jacobian is still whatever it was tromped to) so the solver should error out and tell the user their mistake. > > > Barry > > > > > On Jun 27, 2016, at 1:41 PM, Munson, Todd wrote: > > > > > > Hi Justin, > > > > I will have to look regarding the TAO semismooth solvers. The TAO > > solvers probably "cheated" and modified the Jacobian matrix rather > > than extracting submatrices and shifting the diagonal or using a > > matrix-free version. > > > > Note: the TAO interior-point and semismooth methods start from an element > > of the generalized Jacobian matrix for a semismooth reformulation of > > the VI problem. This generalization Jacobian is a diagonal > > perturbation to a scale version of the Jacobian you input. > > If we cheat and modify the matrix, then it needs to be > > filled back in during a Jacobian evaluation. > > > > At some point, the plan was to move all the VI methods into PETSc proper, > > but we may have stopped with the active-set (ASLS) method because that > > tends to have the best performance for PDE-related problems. > > > > Todd. > > > >> On Jun 27, 2016, at 12:37 PM, Justin Chang wrote: > >> > >> So I figured it out. I had to explicitly form the Tao Gradient/Constraints and Jacobian. I couldn't just "pre-process" the gradient Vec and Jacobian Mat through SNESComputeXXX. Attached is the updated file and makefile. > >> > >> My question now is, why exactly is this the case? This preprocessing strategy seemed to work for bounded constrained optimization solvers (e.g., TRON/BLMVM) but apparently not with the MCP ones. The system is linear so my original reasoning was that the Jacobian shouldn't change, thus it just needs to be assembled once. I recall faintly from a previous discussion that the SNESVI solvers will vary the Mat and Vec sizes depending on the regions that need to be "constrained" or something? > >> > >> Thanks, > >> Justin > >> > >> On Sun, Jun 26, 2016 at 5:03 AM, Barry Smith wrote: > >> > >> I wish I could answer this but I am weak on these algorithms. Hopefully Todd has a good understanding of their application and strengths and weaknesses. > >> > >> Barry > >> > >>> On Jun 25, 2016, at 3:31 PM, Justin Chang wrote: > >>> > >>> Hi all, > >>> > >>> So I modified SNES ex9.c so that one has the option to use TAO's complementarity solvers for this problem. Attached is the file. > >>> > >>> I expect the TAO solvers to behave the same as the SNESVI ones, but I am having the same issues as before - SSILS and SSFLS do not work whatsoever but for some reason ASILS and ASFLS work. Although the latter two produce the same results as the SNES VI counterparts, they converge much slower, and something tells me I am not doing something correctly. Based on what I have seen from the two TAO complementarity examples, I would also expect the AS and SS solvers to be roughly the same. > >>> > >>> BTW, in the modified code, I made some "shortcuts." Instead of explicitly forming the Tao versions of the Gradient and Jacobian, I first assemble the residual r and Jacobian J through the SNESComputeXXX functions. Then I pass them into the TaoSetConstraints and TaoSetJacobian routines. Because this is a linear system, I have: > >>> > >>> f = r - J*u^0 > >>> gradient g = J*u - f = J*(u + *u^0) + r > >>> > >>> were u^0 is the initial vector. I am not sure if this "shortcut" has anything to do with the issue at hand. Attached is the makefile which has instructions on how to run the problem. > >>> > >>> Any ideas what is going on?? > >>> > >>> Thanks! > >>> Justin > >>> > >>> On Wed, Jun 22, 2016 at 9:42 PM, Ed Bueler wrote: > >>> Justin -- > >>> > >>> Yeah, good point. SNESVISetVariableBounds() works fine, at least in ex9.c (see attached patch). The reason for the other choice, which I found in my 5 year old email, was some bug in petsc3.2. > >>> > >>> Ed > >>> > >>> Date: Wed, 22 Jun 2016 08:42:33 +0100 > >>> From: Justin Chang > >>> To: petsc-users > >>> Subject: [petsc-users] SetVariableBounds vs ComputeVariableBounds > >>> > >>> Hi all, > >>> > >>> I am looking at the SNES tutorials ex9.c and ex58.c and am wondering why > >>> SNESVISetComputeVariableBounds() is called instead of just > >>> SNESVISetVariableBounds(). When would it be appropriate to use only using > >>> the latter? > >>> > >>> Thanks, > >>> Justin > >>> > >>> > >> > >> > >> > > > From hzhang at mcs.anl.gov Mon Jun 27 20:40:57 2016 From: hzhang at mcs.anl.gov (Hong) Date: Mon, 27 Jun 2016 20:40:57 -0500 Subject: [petsc-users] Performance of mumps vs. Intel Pardiso In-Reply-To: <1337334190.2752078.1467075579364.JavaMail.yahoo@mail.yahoo.com> References: <1337334190.2752078.1467075579364.JavaMail.yahoo.ref@mail.yahoo.com> <1337334190.2752078.1467075579364.JavaMail.yahoo@mail.yahoo.com> Message-ID: Faraz : Direct sparse solvers are generally not scalable -- they are used for ill-conditioned problems which cannot be solved by iterative methods. Can you try sequential symbolic factorization instead of parallel, i.e., use mumps default '-mat_mumps_icntl_28 1'? Hong Thanks for the quick response. Here are the log_summary for 24, 48 and 72 > cpus: > > 24 cpus > ====== > MatSolve 1 1.0 1.8100e+00 1.0 0.00e+00 0.0 7.0e+02 7.4e+04 > 3.0e+00 0 0 68 3 9 0 0 68 3 9 0 > MatCholFctrSym 1 1.0 4.6683e+01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 > 5.0e+00 6 0 0 0 15 6 0 0 0 15 0 > MatCholFctrNum 1 1.0 5.8129e+02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 > 0.0e+00 78 0 0 0 0 78 0 0 0 0 0 > > 48 cpus > ====== > MatSolve 1 1.0 1.4915e+00 1.0 0.00e+00 0.0 1.6e+03 3.3e+04 > 3.0e+00 0 0 68 3 9 0 0 68 3 9 0 > MatCholFctrSym 1 1.0 5.3486e+01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 > 5.0e+00 9 0 0 0 15 9 0 0 0 15 0 > MatCholFctrNum 1 1.0 4.0803e+02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 > 0.0e+00 71 0 0 0 0 71 0 0 0 0 0 > > 72 cpus > ====== > MatSolve 1 1.0 7.7200e+00 1.1 0.00e+00 0.0 2.6e+03 2.0e+04 > 3.0e+00 1 0 68 2 9 1 0 68 2 9 0 > MatCholFctrSym 1 1.0 1.8439e+02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 > 5.0e+00 29 0 0 0 15 29 0 0 0 15 0 > MatCholFctrNum 1 1.0 3.3969e+02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 > 0.0e+00 53 0 0 0 0 53 0 0 0 0 0 > > Does this look normal or is something off here? Regarding reordering > algorithm of Pardiso. At this time I do not know much about that. I will do > some research and see what I can learn. However, I believe Mumps only has > two options: > > -mat_mumps_icntl_29 - ICNTL(29): parallel ordering 1 = > ptscotch, 2 = parmetis > > I have tried both and do not see any speed difference. Or are you > referring to some other kind of reordering? > > > -------------------------------------------- > On Mon, 6/27/16, Barry Smith wrote: > > Subject: Re: [petsc-users] Performance of mumps vs. Intel Pardiso > To: "Faraz Hussain" > Cc: "petsc-users at mcs.anl.gov" > Date: Monday, June 27, 2016, 5:50 PM > > > These are the only lines that > matter > > MatSolve > 1 1.0 7.7200e+00 1.1 0.00e+00 > 0.0 2.6e+03 2.0e+04 3.0e+00 1 0 68 2 > 9 1 0 68 2 9 0 > MatCholFctrSym 1 1.0 > 1.8439e+02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 5.0e+00 29 0 > 0 0 15 29 0 0 0 15 0 > MatCholFctrNum 1 1.0 > 3.3969e+02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 53 0 > 0 0 0 53 0 0 0 0 0 > > look at the log summary for 24 > and 48 processes. How are the symbolic and numeric parts > scaling with the number of processes? > > Things that could affect the performance a lot. > Is the symbolic factorization done in parallel? What > reordering is used? If Pardiso is using a reordering that is > better for this matrix and has (much) lower fill that could > explain why it is so much faster. > > Perhaps correspond with the MUMPS developers > on what MUMPS options might make it faster > > Barry > > > > On Jun 27, 2016, at 5:39 PM, Faraz Hussain > > wrote: > > > > I am > struggling trying to understand why mumps is so much slower > than Intel Pardiso solver for my simple test matrix ( > 3million^2 sparse symmetrix matrix with ~1000 non-zero > entries per line ). > > > > My compute nodes have 24 cpus each. Intel > Pardiso solves it in in 120 seconds using all 24 cpus of one > node. With Mumps I get: > > > > 24 cpus - 765 seconds > > > 48 cpus - 401 seconds > > 72 cpus - 344 > seconds > > beyond 72 cpus no speed > improvement. > > > > I am attaching the -log_summary to see if > there is something wrong in how I am solving the problem. I > am really hoping mumps will be faster when using more cpus.. > Otherwise I will have to abort my exploration of > mumps! > -------------- next part -------------- An HTML attachment was scrubbed... URL: From bsmith at mcs.anl.gov Mon Jun 27 21:12:26 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Mon, 27 Jun 2016 21:12:26 -0500 Subject: [petsc-users] Performance of mumps vs. Intel Pardiso In-Reply-To: <1337334190.2752078.1467075579364.JavaMail.yahoo@mail.yahoo.com> References: <1337334190.2752078.1467075579364.JavaMail.yahoo.ref@mail.yahoo.com> <1337334190.2752078.1467075579364.JavaMail.yahoo@mail.yahoo.com> Message-ID: <1CB42977-6E35-417E-B0E0-2B7ABCE71C7D@mcs.anl.gov> The symbolic factorization is taking more time with more processes while the numerical factorization is taking less time. So the symbolic factorization is limiting the scalability. Note that the numerical times are great but at least they get better. Barry > On Jun 27, 2016, at 7:59 PM, Faraz Hussain wrote: > > Thanks for the quick response. Here are the log_summary for 24, 48 and 72 cpus: > > 24 cpus > ====== > MatSolve 1 1.0 1.8100e+00 1.0 0.00e+00 0.0 7.0e+02 7.4e+04 3.0e+00 0 0 68 3 9 0 0 68 3 9 0 > MatCholFctrSym 1 1.0 4.6683e+01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 5.0e+00 6 0 0 0 15 6 0 0 0 15 0 > MatCholFctrNum 1 1.0 5.8129e+02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 78 0 0 0 0 78 0 0 0 0 0 > > 48 cpus > ====== > MatSolve 1 1.0 1.4915e+00 1.0 0.00e+00 0.0 1.6e+03 3.3e+04 3.0e+00 0 0 68 3 9 0 0 68 3 9 0 > MatCholFctrSym 1 1.0 5.3486e+01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 5.0e+00 9 0 0 0 15 9 0 0 0 15 0 > MatCholFctrNum 1 1.0 4.0803e+02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 71 0 0 0 0 71 0 0 0 0 0 > > 72 cpus > ====== > MatSolve 1 1.0 7.7200e+00 1.1 0.00e+00 0.0 2.6e+03 2.0e+04 3.0e+00 1 0 68 2 9 1 0 68 2 9 0 > MatCholFctrSym 1 1.0 1.8439e+02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 5.0e+00 29 0 0 0 15 29 0 0 0 15 0 > MatCholFctrNum 1 1.0 3.3969e+02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 53 0 0 0 0 53 0 0 0 0 0 > > Does this look normal or is something off here? Regarding reordering algorithm of Pardiso. At this time I do not know much about that. I will do some research and see what I can learn. However, I believe Mumps only has two options: > > -mat_mumps_icntl_29 - ICNTL(29): parallel ordering 1 = ptscotch, 2 = parmetis > > I have tried both and do not see any speed difference. Or are you referring to some other kind of reordering? > > > -------------------------------------------- > On Mon, 6/27/16, Barry Smith wrote: > > Subject: Re: [petsc-users] Performance of mumps vs. Intel Pardiso > To: "Faraz Hussain" > Cc: "petsc-users at mcs.anl.gov" > Date: Monday, June 27, 2016, 5:50 PM > > > These are the only lines that > matter > > MatSolve > 1 1.0 7.7200e+00 1.1 0.00e+00 > 0.0 2.6e+03 2.0e+04 3.0e+00 1 0 68 2 > 9 1 0 68 2 9 0 > MatCholFctrSym 1 1.0 > 1.8439e+02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 5.0e+00 29 0 > 0 0 15 29 0 0 0 15 0 > MatCholFctrNum 1 1.0 > 3.3969e+02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 53 0 > 0 0 0 53 0 0 0 0 0 > > look at the log summary for 24 > and 48 processes. How are the symbolic and numeric parts > scaling with the number of processes? > > Things that could affect the performance a lot. > Is the symbolic factorization done in parallel? What > reordering is used? If Pardiso is using a reordering that is > better for this matrix and has (much) lower fill that could > explain why it is so much faster. > > Perhaps correspond with the MUMPS developers > on what MUMPS options might make it faster > > Barry > > >> On Jun 27, 2016, at 5:39 PM, Faraz Hussain > > wrote: >> >> I am > struggling trying to understand why mumps is so much slower > than Intel Pardiso solver for my simple test matrix ( > 3million^2 sparse symmetrix matrix with ~1000 non-zero > entries per line ). >> >> My compute nodes have 24 cpus each. Intel > Pardiso solves it in in 120 seconds using all 24 cpus of one > node. With Mumps I get: >> >> 24 cpus - 765 seconds >> > 48 cpus - 401 seconds >> 72 cpus - 344 > seconds >> beyond 72 cpus no speed > improvement. >> >> I am attaching the -log_summary to see if > there is something wrong in how I am solving the problem. I > am really hoping mumps will be faster when using more cpus.. > Otherwise I will have to abort my exploration of > mumps! From bsmith at mcs.anl.gov Mon Jun 27 21:54:14 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Mon, 27 Jun 2016 21:54:14 -0500 Subject: [petsc-users] ISGetTotalIndices with Fortran In-Reply-To: References: Message-ID: I have added these fortran interfaces in the branch barry/add-missing-apis/maint and merged into the next branch for testing. When it passes the tests I will merge it into maint and it will then be available in the next patch release. Barry > On Jun 27, 2016, at 7:50 AM, Constantin Nguyen Van wrote: > > Hi, > > I'm tring to use ISGetTotalIndices in a Fortran program but I've got an undefined reference error message when I compile it :"undefined reference to `isgettotalindices_'". > I've also tried to replace IsGetIndices by ISGetTotalIndices and also ISGetNonlocalIndices in this example http://www.mcs.anl.gov/petsc/petsc-current/src/vec/is/is/examples/tutorials/ex1f.F.html but the same error occurs. > The "nm /lib/libpetsc.so |grep ISGetTotal" command returns "000000000031a7ab T ISGetTotalIndices" so that the symbol is there and nothing seems to be missing. > > Are those routines available in Fortran? > > Thank you. > Constantin. > > From hzhang at mcs.anl.gov Mon Jun 27 22:36:03 2016 From: hzhang at mcs.anl.gov (Hong) Date: Mon, 27 Jun 2016 22:36:03 -0500 Subject: [petsc-users] Performance of mumps vs. Intel Pardiso In-Reply-To: <1CB42977-6E35-417E-B0E0-2B7ABCE71C7D@mcs.anl.gov> References: <1337334190.2752078.1467075579364.JavaMail.yahoo.ref@mail.yahoo.com> <1337334190.2752078.1467075579364.JavaMail.yahoo@mail.yahoo.com> <1CB42977-6E35-417E-B0E0-2B7ABCE71C7D@mcs.anl.gov> Message-ID: Barry: > > The symbolic factorization is taking more time with more processes while > the numerical factorization is taking less time. So the symbolic > factorization is limiting the scalability. Note that the numerical times > are great but at least they get better. > Parallel symbolic factorization seems troublesome. I use it only when sequential version fails in memory usage. Hong > > > On Jun 27, 2016, at 7:59 PM, Faraz Hussain > wrote: > > > > Thanks for the quick response. Here are the log_summary for 24, 48 and > 72 cpus: > > > > 24 cpus > > ====== > > MatSolve 1 1.0 1.8100e+00 1.0 0.00e+00 0.0 7.0e+02 7.4e+04 > 3.0e+00 0 0 68 3 9 0 0 68 3 9 0 > > MatCholFctrSym 1 1.0 4.6683e+01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 > 5.0e+00 6 0 0 0 15 6 0 0 0 15 0 > > MatCholFctrNum 1 1.0 5.8129e+02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 > 0.0e+00 78 0 0 0 0 78 0 0 0 0 0 > > > > 48 cpus > > ====== > > MatSolve 1 1.0 1.4915e+00 1.0 0.00e+00 0.0 1.6e+03 3.3e+04 > 3.0e+00 0 0 68 3 9 0 0 68 3 9 0 > > MatCholFctrSym 1 1.0 5.3486e+01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 > 5.0e+00 9 0 0 0 15 9 0 0 0 15 0 > > MatCholFctrNum 1 1.0 4.0803e+02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 > 0.0e+00 71 0 0 0 0 71 0 0 0 0 0 > > > > 72 cpus > > ====== > > MatSolve 1 1.0 7.7200e+00 1.1 0.00e+00 0.0 2.6e+03 2.0e+04 > 3.0e+00 1 0 68 2 9 1 0 68 2 9 0 > > MatCholFctrSym 1 1.0 1.8439e+02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 > 5.0e+00 29 0 0 0 15 29 0 0 0 15 0 > > MatCholFctrNum 1 1.0 3.3969e+02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 > 0.0e+00 53 0 0 0 0 53 0 0 0 0 0 > > > > Does this look normal or is something off here? Regarding reordering > algorithm of Pardiso. At this time I do not know much about that. I will do > some research and see what I can learn. However, I believe Mumps only has > two options: > > > > -mat_mumps_icntl_29 - ICNTL(29): parallel ordering 1 = > ptscotch, 2 = parmetis > > > > I have tried both and do not see any speed difference. Or are you > referring to some other kind of reordering? > > > > > > -------------------------------------------- > > On Mon, 6/27/16, Barry Smith wrote: > > > > Subject: Re: [petsc-users] Performance of mumps vs. Intel Pardiso > > To: "Faraz Hussain" > > Cc: "petsc-users at mcs.anl.gov" > > Date: Monday, June 27, 2016, 5:50 PM > > > > > > These are the only lines that > > matter > > > > MatSolve > > 1 1.0 7.7200e+00 1.1 0.00e+00 > > 0.0 2.6e+03 2.0e+04 3.0e+00 1 0 68 2 > > 9 1 0 68 2 9 0 > > MatCholFctrSym 1 1.0 > > 1.8439e+02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 5.0e+00 29 0 > > 0 0 15 29 0 0 0 15 0 > > MatCholFctrNum 1 1.0 > > 3.3969e+02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 53 0 > > 0 0 0 53 0 0 0 0 0 > > > > look at the log summary for 24 > > and 48 processes. How are the symbolic and numeric parts > > scaling with the number of processes? > > > > Things that could affect the performance a lot. > > Is the symbolic factorization done in parallel? What > > reordering is used? If Pardiso is using a reordering that is > > better for this matrix and has (much) lower fill that could > > explain why it is so much faster. > > > > Perhaps correspond with the MUMPS developers > > on what MUMPS options might make it faster > > > > Barry > > > > > >> On Jun 27, 2016, at 5:39 PM, Faraz Hussain > > > > wrote: > >> > >> I am > > struggling trying to understand why mumps is so much slower > > than Intel Pardiso solver for my simple test matrix ( > > 3million^2 sparse symmetrix matrix with ~1000 non-zero > > entries per line ). > >> > >> My compute nodes have 24 cpus each. Intel > > Pardiso solves it in in 120 seconds using all 24 cpus of one > > node. With Mumps I get: > >> > >> 24 cpus - 765 seconds > >> > > 48 cpus - 401 seconds > >> 72 cpus - 344 > > seconds > >> beyond 72 cpus no speed > > improvement. > >> > >> I am attaching the -log_summary to see if > > there is something wrong in how I am solving the problem. I > > am really hoping mumps will be faster when using more cpus.. > > Otherwise I will have to abort my exploration of > > mumps! > > -------------- next part -------------- An HTML attachment was scrubbed... URL: From jed at jedbrown.org Tue Jun 28 08:31:17 2016 From: jed at jedbrown.org (Jed Brown) Date: Tue, 28 Jun 2016 07:31:17 -0600 Subject: [petsc-users] SetVariableBounds vs ComputeVariableBounds In-Reply-To: References: <6CE93113-F59F-4848-B893-4A54B483652A@mcs.anl.gov> Message-ID: <878txpfniy.fsf@jedbrown.org> Barry Smith writes: > There is the same issue with ODE integrators for linear problems. The solvers tromp on the Jacobian. So with TS, the shift comes from a mass matrix and that matrix could conceivably change independent of whether the (RHS) Jacobian has changed. > We should actually add an error indicator in these TAO/TS solvers, if the "Jacobian" state value is not increased in the next time step/iteration this means the person did not supply the new Jacobian (in other words the Jacobian is still whatever it was tromped to) so the solver should error out and tell the user their mistake. But with TAO, isn't the shift always diagonal? It seems wasteful to always do a full assembly (or store a pristine copy) when only a modified shift is needed. If there is a simple and reliable way to correct the shift, it would be a nicer interface to just do the right thing. Note that TS is extra confusing because the user can pass IJacobian, RHSJacobian, or both, and we reuse whichever matrix they provide. -------------- next part -------------- A non-text attachment was scrubbed... Name: signature.asc Type: application/pgp-signature Size: 818 bytes Desc: not available URL: From tmunson at mcs.anl.gov Tue Jun 28 08:54:27 2016 From: tmunson at mcs.anl.gov (Munson, Todd) Date: Tue, 28 Jun 2016 13:54:27 +0000 Subject: [petsc-users] SetVariableBounds vs ComputeVariableBounds In-Reply-To: <878txpfniy.fsf@jedbrown.org> References: <6CE93113-F59F-4848-B893-4A54B483652A@mcs.anl.gov> <878txpfniy.fsf@jedbrown.org> Message-ID: With TAO and the reduced space methods, it depends on how the reduced space matrix is being constructed. We may be replacing rows of the Jacobian matrix with the correct identity row, rather than extracting a submatrix, so that we do not have to worry about the preconditioner (e.g. extract a sub matrix from the preconditioner as well). I need to look better into how the PETSc active-set method is handling the reduced space matrix and preconditioner. Todd. > On Jun 28, 2016, at 8:31 AM, Jed Brown wrote: > > Barry Smith writes: > >> There is the same issue with ODE integrators for linear problems. The solvers tromp on the Jacobian. > > So with TS, the shift comes from a mass matrix and that matrix could > conceivably change independent of whether the (RHS) Jacobian has > changed. > >> We should actually add an error indicator in these TAO/TS solvers, if the "Jacobian" state value is not increased in the next time step/iteration this means the person did not supply the new Jacobian (in other words the Jacobian is still whatever it was tromped to) so the solver should error out and tell the user their mistake. > > But with TAO, isn't the shift always diagonal? It seems wasteful to > always do a full assembly (or store a pristine copy) when only a > modified shift is needed. If there is a simple and reliable way to > correct the shift, it would be a nicer interface to just do the right > thing. Note that TS is extra confusing because the user can pass > IJacobian, RHSJacobian, or both, and we reuse whichever matrix they > provide. From it.sadr at gmail.com Tue Jun 28 09:14:37 2016 From: it.sadr at gmail.com (ehsan sadrfaridpour) Date: Tue, 28 Jun 2016 10:14:37 -0400 Subject: [petsc-users] Some help for partitioning a vector Message-ID: Hi, Sorry for long email. My questions are in the bottom. I try to use MatMult to multiply a vector to a matrix but I face below problem. > [0]PETSC ERROR: --------------------- Error Message > -------------------------------------------------------------- > [0]PETSC ERROR: Nonconforming object sizes > [0]PETSC ERROR: Incompatible partition of A (20) and xx (40) > [0]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html > for trouble shooting. > [1]PETSC ERROR: --------------------- Error Message > -------------------------------------------------------------- > [1]PETSC ERROR: Nonconforming object sizes > [1]PETSC ERROR: Incompatible partition of A (20) and xx (40) > [1]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html > for trouble shooting. > [1]PETSC ERROR: Petsc Release Version 3.6.3, unknown > I use 2 process for this. I check the local ranges with VecGetOwnershipRange and MatGetOwnershipRange commands and they reveal that the matrix is distributed between processes while the vector is exist completely on both processes. > in rank:1, vector start:0, end:40, matrix start:20, end:40 > in rank:0, vector start:0, end:40, matrix start:0, end:20 > I created the vector "vol_" using below commands. Vec vol_; VecCreateMPI(PETSC_COMM_SELF, PETSC_DECIDE, size_,&vol_); VecSet(vol_,val); //Sets all components of a vector to a single scalar value. VecAssemblyBegin(vol_); VecAssemblyEnd(vol_); *My questions:* A- What should I do differently to create a scattered vector in the first place? B- If my vector initialization is ok, what should I do now to scatter the vector among the processes? I saw the VecScatter function, but I am not sure how to use it, if it is the right function. Best, Ehsan -------------- next part -------------- An HTML attachment was scrubbed... URL: From constantin.nguyen.van at openmailbox.org Tue Jun 28 09:51:38 2016 From: constantin.nguyen.van at openmailbox.org (Constantin Nguyen Van) Date: Tue, 28 Jun 2016 16:51:38 +0200 Subject: [petsc-users] ISGetTotalIndices with Fortran In-Reply-To: References: Message-ID: Alright! Thank you. Constantin. Le 2016-06-28 04:54, Barry Smith a ?crit?: > I have added these fortran interfaces in the branch > barry/add-missing-apis/maint and merged into the next branch for > testing. When it passes the tests I will merge it into maint and it > will then be available in the next patch release. > > Barry > >> On Jun 27, 2016, at 7:50 AM, Constantin Nguyen Van >> wrote: >> >> Hi, >> >> I'm tring to use ISGetTotalIndices in a Fortran program but I've got >> an undefined reference error message when I compile it :"undefined >> reference to `isgettotalindices_'". >> I've also tried to replace IsGetIndices by ISGetTotalIndices and also >> ISGetNonlocalIndices in this example >> http://www.mcs.anl.gov/petsc/petsc-current/src/vec/is/is/examples/tutorials/ex1f.F.html >> but the same error occurs. >> The "nm /lib/libpetsc.so |grep ISGetTotal" command returns >> "000000000031a7ab T ISGetTotalIndices" so that the symbol is there and >> nothing seems to be missing. >> >> Are those routines available in Fortran? >> >> Thank you. >> Constantin. >> >> From bsmith at mcs.anl.gov Tue Jun 28 11:22:12 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Tue, 28 Jun 2016 11:22:12 -0500 Subject: [petsc-users] Some help for partitioning a vector In-Reply-To: References: Message-ID: <643408B7-2038-484E-BB9C-C18515F3D7A2@mcs.anl.gov> Only parallel vectors can be multiplied with parallel matrices and the vector and matrix must exist on the same MPI communicator. In your case you are trying to multiple a sequential vector by a parallel matrix. You should use VecCreateMPI(PETSC_COMM_WORLD, PETSC_DECIDE, size_,&vol_); ^^^^^^ use PETSC_COMM_WORLD or the communicator you used in creating the matrix, don't use PETSC_COMM_SELF > On Jun 28, 2016, at 9:14 AM, ehsan sadrfaridpour wrote: > > Hi, > Sorry for long email. My questions are in the bottom. > > I try to use MatMult to multiply a vector to a matrix but I face below problem. > [0]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- > [0]PETSC ERROR: Nonconforming object sizes > [0]PETSC ERROR: Incompatible partition of A (20) and xx (40) > [0]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. > [1]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- > [1]PETSC ERROR: Nonconforming object sizes > [1]PETSC ERROR: Incompatible partition of A (20) and xx (40) > [1]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. > [1]PETSC ERROR: Petsc Release Version 3.6.3, unknown > > I use 2 process for this. I check the local ranges with VecGetOwnershipRange and MatGetOwnershipRange commands and they reveal that the matrix is distributed between processes while the vector is exist completely on both processes. > in rank:1, vector start:0, end:40, matrix start:20, end:40 > in rank:0, vector start:0, end:40, matrix start:0, end:20 > > I created the vector "vol_" using below commands. > Vec vol_; > VecCreateMPI(PETSC_COMM_SELF, PETSC_DECIDE, size_,&vol_); > VecSet(vol_,val); //Sets all components of a vector to a single scalar value. > VecAssemblyBegin(vol_); > VecAssemblyEnd(vol_); > > My questions: > A- What should I do differently to create a scattered vector in the first place? > B- If my vector initialization is ok, what should I do now to scatter the vector among the processes? > I saw the VecScatter function, but I am not sure how to use it, if it is the right function. > > Best, > Ehsan > From it.sadr at gmail.com Tue Jun 28 11:29:38 2016 From: it.sadr at gmail.com (ehsan sadrfaridpour) Date: Tue, 28 Jun 2016 12:29:38 -0400 Subject: [petsc-users] Some help for partitioning a vector In-Reply-To: <643408B7-2038-484E-BB9C-C18515F3D7A2@mcs.anl.gov> References: <643408B7-2038-484E-BB9C-C18515F3D7A2@mcs.anl.gov> Message-ID: Thanks a lot, sorry I didn't catch the SELF from my sequential version. Best, Ehsan On Tue, Jun 28, 2016 at 12:22 PM, Barry Smith wrote: > > Only parallel vectors can be multiplied with parallel matrices and the > vector and matrix must exist on the same MPI communicator. In your case you > are trying to multiple a sequential vector by a parallel matrix. You > should use VecCreateMPI(PETSC_COMM_WORLD, PETSC_DECIDE, size_,&vol_); > > ^^^^^^ > use PETSC_COMM_WORLD or the communicator you used in > creating the matrix, don't use PETSC_COMM_SELF > > > > On Jun 28, 2016, at 9:14 AM, ehsan sadrfaridpour > wrote: > > > > Hi, > > Sorry for long email. My questions are in the bottom. > > > > I try to use MatMult to multiply a vector to a matrix but I face below > problem. > > [0]PETSC ERROR: --------------------- Error Message > -------------------------------------------------------------- > > [0]PETSC ERROR: Nonconforming object sizes > > [0]PETSC ERROR: Incompatible partition of A (20) and xx (40) > > [0]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html > for trouble shooting. > > [1]PETSC ERROR: --------------------- Error Message > -------------------------------------------------------------- > > [1]PETSC ERROR: Nonconforming object sizes > > [1]PETSC ERROR: Incompatible partition of A (20) and xx (40) > > [1]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html > for trouble shooting. > > [1]PETSC ERROR: Petsc Release Version 3.6.3, unknown > > > > I use 2 process for this. I check the local ranges with > VecGetOwnershipRange and MatGetOwnershipRange commands and they reveal that > the matrix is distributed between processes while the vector is exist > completely on both processes. > > in rank:1, vector start:0, end:40, matrix start:20, end:40 > > in rank:0, vector start:0, end:40, matrix start:0, end:20 > > > > I created the vector "vol_" using below commands. > > Vec vol_; > > VecCreateMPI(PETSC_COMM_SELF, PETSC_DECIDE, size_,&vol_); > > VecSet(vol_,val); //Sets all components of a vector to a > single scalar value. > > VecAssemblyBegin(vol_); > > VecAssemblyEnd(vol_); > > > > My questions: > > A- What should I do differently to create a scattered vector in the > first place? > > B- If my vector initialization is ok, what should I do now to scatter > the vector among the processes? > > I saw the VecScatter function, but I am not sure how to use it, if it is > the right function. > > > > Best, > > Ehsan > > > > -------------- next part -------------- An HTML attachment was scrubbed... URL: From faraz_hussain at yahoo.com Tue Jun 28 13:09:55 2016 From: faraz_hussain at yahoo.com (Faraz Hussain) Date: Tue, 28 Jun 2016 18:09:55 +0000 (UTC) Subject: [petsc-users] Performance of mumps vs. Intel Pardiso References: <318728537.3077769.1467137395158.JavaMail.yahoo.ref@mail.yahoo.com> Message-ID: <318728537.3077769.1467137395158.JavaMail.yahoo@mail.yahoo.com> Thanks, the solve times are faster after I tried sequential symbolic factorization instead of parallel. However, they are still slower than Pardiso with 24 cpus ( 120 seconds ). I am not sure if it a configuration issue on my end or a limitation of mumps? Is it possible for someone else to solve my matrix to verify they get the same times? If not, I will contact mumps developers to see if I can send them my matrix to benchmark. 24 cpus ====== MatCholFctrSym 1 1.0 1.0325e+02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 5.0e+00 16 0 0 0 15 16 0 0 0 $ MatCholFctrNum 1 1.0 4.2542e+02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 67 0 0 0 0 67 0 0 0 $ 48 cpus ====== MatCholFctrSym 1 1.0 4.3957e+01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 5.0e+00 12 0 0 0 15 12 0 0 0 $ MatCholFctrNum 1 1.0 2.5982e+02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 70 0 0 0 0 70 0 0 0 $ 72 cpus ====== MatCholFctrSym 1 1.0 4.3596e+01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 5.0e+00 12 0 0 0 15 12 0 0 0 $ MatCholFctrNum 1 1.0 2.2195e+02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 59 0 0 0 0 59 0 0 0 $ 240 cpus ======= MatCholFctrSym 1 1.0 4.7354e+01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 5.0e+00 13 0 0 0 15 13 0 0 0 $ MatCholFctrNum 1 1.0 1.8543e+02 1.0 0.00e+00 0.0 0.0e+00 -------------------------------------------- On Mon, 6/27/16, Hong wrote: Subject: Re: [petsc-users] Performance of mumps vs. Intel Pardiso To: "Faraz Hussain" Cc: "Barry Smith" , "petsc-users at mcs.anl.gov" Date: Monday, June 27, 2016, 8:40 PM Faraz :Direct sparse solvers are generally not scalable -- they are used for ill-conditioned problems which cannot be solved by iterative methods.? Can you try sequential symbolic factorization instead of parallel, i.e., use mumps default '-mat_mumps_icntl_28 1'? Hong Thanks for the quick response. Here are the log_summary for 24, 48 and 72 cpus: 24 cpus ====== MatSolve? ? ? ? ? ? ? ?1 1.0 1.8100e+00 1.0 0.00e+00 0.0 7.0e+02 7.4e+04 3.0e+00? 0? 0 68? 3? 9? ?0? 0 68? 3? 9? ? ?0 MatCholFctrSym? ? ? ? ?1 1.0 4.6683e+01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 5.0e+00? 6? 0? 0? 0 15? ?6? 0? 0? 0 15? ? ?0 MatCholFctrNum? ? ? ? ?1 1.0 5.8129e+02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 78? 0? 0? 0? 0? 78? 0? 0? 0? 0? ? ?0 48 cpus ====== MatSolve? ? ? ? ? ? ? ?1 1.0 1.4915e+00 1.0 0.00e+00 0.0 1.6e+03 3.3e+04 3.0e+00? 0? 0 68? 3? 9? ?0? 0 68? 3? 9? ? ?0 MatCholFctrSym? ? ? ? ?1 1.0 5.3486e+01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 5.0e+00? 9? 0? 0? 0 15? ?9? 0? 0? 0 15? ? ?0 MatCholFctrNum? ? ? ? ?1 1.0 4.0803e+02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 71? 0? 0? 0? 0? 71? 0? 0? 0? 0? ? ?0 72 cpus ====== MatSolve? ? ? ? ? ? ? ?1 1.0 7.7200e+00 1.1 0.00e+00 0.0 2.6e+03 2.0e+04 3.0e+00? 1? 0 68? 2? 9? ?1? 0 68? 2? 9? ? ?0 MatCholFctrSym? ? ? ? ?1 1.0 1.8439e+02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 5.0e+00 29? 0? 0? 0 15? 29? 0? 0? 0 15? ? ?0 MatCholFctrNum? ? ? ? ?1 1.0 3.3969e+02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 53? 0? 0? 0? 0? 53? 0? 0? 0? 0? ? ?0 Does this look normal or is something off here? Regarding reordering algorithm of Pardiso. At this time I do not know much about that. I will do some research and see what I can learn. However,? I believe Mumps only has two options: ? ? ? ? -mat_mumps_icntl_29? ? ?- ICNTL(29): parallel ordering 1 = ptscotch, 2 = parmetis I have tried both and do not see any speed difference. Or are you referring to some other kind of reordering? -------------------------------------------- On Mon, 6/27/16, Barry Smith wrote: ?Subject: Re: [petsc-users] Performance of mumps vs. Intel Pardiso ?To: "Faraz Hussain" ?Cc: "petsc-users at mcs.anl.gov" ?Date: Monday, June 27, 2016, 5:50 PM ????These are the only lines that ?matter ?MatSolve? ? ? ? ?? ? ? ? ? ???1 1.0 7.7200e+00 1.1 0.00e+00 ?0.0 2.6e+03 2.0e+04 3.0e+00? 1? 0 68? 2? ?9???1? 0 68? 2? 9? ???0 ?MatCholFctrSym? ? ? ???1 1.0 ?1.8439e+02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 5.0e+00 29? 0? ?0? 0 15? 29? 0? 0? 0 15? ???0 ?MatCholFctrNum? ? ? ???1 1.0 ?3.3969e+02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 53? 0? ?0? 0? 0? 53? 0? 0? 0? 0? ???0 ?look at the log summary for 24 ?and 48 processes. How are the symbolic and numeric parts ?scaling with the number of processes? ?Things that could affect the performance a lot. ?Is the symbolic factorization done in parallel? What ?reordering is used? If Pardiso is using a reordering that is ?better for this matrix and has (much) lower fill that could ?explain why it is so much faster. ? Perhaps correspond with the MUMPS developers ?on what MUMPS options might make it faster ?? Barry ?> On Jun 27, 2016, at 5:39 PM, Faraz Hussain ? ?wrote: ?> ?> I am ?struggling trying to understand why mumps is so much slower ?than Intel Pardiso solver for my simple test matrix ( ?3million^2 sparse symmetrix matrix with ~1000 non-zero ?entries per line ). ?> ?> My compute nodes have 24 cpus each. Intel ?Pardiso solves it in in 120 seconds using all 24 cpus of one ?node. With Mumps I get: ?> ?> 24 cpus - 765 seconds ?> ?48 cpus - 401 seconds ?> 72 cpus - 344 ?seconds ?> beyond 72 cpus no speed ?improvement. ?> ?> I am attaching the -log_summary to see if ?there is something wrong in how I am solving the problem. I ?am really hoping mumps will be faster when using more cpus.. ?Otherwise I will have to abort my exploration of ?mumps! From hzhang at mcs.anl.gov Tue Jun 28 13:40:50 2016 From: hzhang at mcs.anl.gov (Hong) Date: Tue, 28 Jun 2016 13:40:50 -0500 Subject: [petsc-users] Performance of mumps vs. Intel Pardiso In-Reply-To: <318728537.3077769.1467137395158.JavaMail.yahoo@mail.yahoo.com> References: <318728537.3077769.1467137395158.JavaMail.yahoo.ref@mail.yahoo.com> <318728537.3077769.1467137395158.JavaMail.yahoo@mail.yahoo.com> Message-ID: Faraz : The results look reasonable to me. I guess you collect strong speedup, i.e., fixed problem size while increasing cpus. How large is your matrix? Thanks, the solve times are faster after I tried sequential symbolic > factorization instead of parallel. However, they are still slower than > Pardiso with 24 cpus ( 120 seconds ). I am not sure if it a configuration > issue on my end or a limitation of mumps? > > How do you run Pardiso with 24 cpus? Is it possible for someone else to solve my matrix to verify they get the > same times? If not, I will contact mumps developers to see if I can send > them my matrix to benchmark. > mumps developers would give you better suggestions. Hong > > -------------------------------------------- > On Mon, 6/27/16, Hong wrote: > > Subject: Re: [petsc-users] Performance of mumps vs. Intel Pardiso > To: "Faraz Hussain" > Cc: "Barry Smith" , "petsc-users at mcs.anl.gov" < > petsc-users at mcs.anl.gov> > Date: Monday, June 27, 2016, 8:40 PM > > Faraz :Direct sparse solvers are > generally not scalable -- they are used for ill-conditioned > problems which cannot be solved by iterative > methods. > Can > you try sequential symbolic factorization instead of > parallel, i.e., use mumps default '-mat_mumps_icntl_28 > 1'? > Hong > Thanks > for the quick response. Here are the log_summary for 24, 48 > and 72 cpus: > > > > 24 cpus > > ====== > > MatSolve 1 1.0 1.8100e+00 1.0 0.00e+00 > 0.0 7.0e+02 7.4e+04 3.0e+00 0 0 68 3 9 0 0 > 68 3 9 0 > > MatCholFctrSym 1 1.0 4.6683e+01 1.0 0.00e+00 > 0.0 0.0e+00 0.0e+00 5.0e+00 6 0 0 0 15 6 0 > 0 0 15 0 > > MatCholFctrNum 1 1.0 5.8129e+02 1.0 0.00e+00 > 0.0 0.0e+00 0.0e+00 0.0e+00 78 0 0 0 0 78 0 > 0 0 0 0 > > > > 48 cpus > > ====== > > MatSolve 1 1.0 1.4915e+00 1.0 0.00e+00 > 0.0 1.6e+03 3.3e+04 3.0e+00 0 0 68 3 9 0 0 > 68 3 9 0 > > MatCholFctrSym 1 1.0 5.3486e+01 1.0 0.00e+00 > 0.0 0.0e+00 0.0e+00 5.0e+00 9 0 0 0 15 9 0 > 0 0 15 0 > > MatCholFctrNum 1 1.0 4.0803e+02 1.0 0.00e+00 > 0.0 0.0e+00 0.0e+00 0.0e+00 71 0 0 0 0 71 0 > 0 0 0 0 > > > > 72 cpus > > ====== > > MatSolve 1 > 1.0 7.7200e+00 1.1 0.00e+00 0.0 2.6e+03 2.0e+04 3.0e+00 > 1 0 68 2 9 1 0 68 2 9 0 > > MatCholFctrSym 1 1.0 1.8439e+02 1.0 0.00e+00 > 0.0 0.0e+00 0.0e+00 5.0e+00 29 0 0 0 15 29 0 0 > 0 15 0 > > MatCholFctrNum 1 1.0 3.3969e+02 1.0 0.00e+00 > 0.0 0.0e+00 0.0e+00 0.0e+00 53 0 0 0 0 53 0 > 0 0 0 0 > > > > Does this look normal or is something off here? > Regarding reordering algorithm of Pardiso. At this time I do > not know much about that. I will do some research and see > what I can learn. However, I believe Mumps only has two > options: > > > > -mat_mumps_icntl_29 - ICNTL(29): parallel > ordering 1 = ptscotch, 2 = parmetis > > > > I have tried both and do not see any speed difference. Or > are you referring to some other kind of reordering? > > > > > > -------------------------------------------- > > On Mon, 6/27/16, Barry Smith > wrote: > > > > Subject: Re: [petsc-users] Performance of mumps vs. Intel > Pardiso > > To: "Faraz Hussain" > > Cc: "petsc-users at mcs.anl.gov" > > > Date: Monday, June 27, 2016, 5:50 PM > > > > > > These are the only lines that > > matter > > > > MatSolve > > 1 1.0 7.7200e+00 1.1 0.00e+00 > > 0.0 2.6e+03 2.0e+04 3.0e+00 1 0 68 2 > > 9 1 0 68 2 9 0 > > MatCholFctrSym 1 1.0 > > 1.8439e+02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 5.0e+00 29 > 0 > > 0 0 15 29 0 0 0 15 0 > > MatCholFctrNum 1 1.0 > > 3.3969e+02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 53 > 0 > > 0 0 0 53 0 0 0 0 0 > > > > look at the log summary for 24 > > and 48 processes. How are the symbolic and numeric > parts > > scaling with the number of processes? > > > > Things that could affect the performance a lot. > > Is the symbolic factorization done in parallel? What > > reordering is used? If Pardiso is using a reordering that > is > > better for this matrix and has (much) lower fill that > could > > explain why it is so much faster. > > > > Perhaps correspond with the MUMPS developers > > on what MUMPS options might make it faster > > > > Barry > > > > > > > On Jun 27, 2016, at 5:39 PM, Faraz Hussain > > > > wrote: > > > > > > I am > > struggling trying to understand why mumps is so much > slower > > than Intel Pardiso solver for my simple test matrix ( > > 3million^2 sparse symmetrix matrix with ~1000 non-zero > > entries per line ). > > > > > > My compute nodes have 24 cpus each. Intel > > Pardiso solves it in in 120 seconds using all 24 cpus of > one > > node. With Mumps I get: > > > > > > 24 cpus - 765 seconds > > > > > 48 cpus - 401 seconds > > > 72 cpus - 344 > > seconds > > > beyond 72 cpus no speed > > improvement. > > > > > > I am attaching the -log_summary to see if > > there is something wrong in how I am solving the problem. > I > > am really hoping mumps will be faster when using more > cpus.. > > Otherwise I will have to abort my exploration of > > mumps! > > > -------------- next part -------------- An HTML attachment was scrubbed... URL: From faraz_hussain at yahoo.com Tue Jun 28 13:49:37 2016 From: faraz_hussain at yahoo.com (Faraz Hussain) Date: Tue, 28 Jun 2016 18:49:37 +0000 (UTC) Subject: [petsc-users] Performance of mumps vs. Intel Pardiso References: <915984916.3127703.1467139777181.JavaMail.yahoo.ref@mail.yahoo.com> Message-ID: <915984916.3127703.1467139777181.JavaMail.yahoo@mail.yahoo.com> >> Faraz :The results look reasonable >> to me. I guess you collect strong speedup, i.e., fixed >> problem size while increasing cpus. How large is your >> matrix? My matrix is 3million^2 with max 1000 non-zeroes per line >> How do you run ?Pardiso with 24 cpus?? Pardiso supports multi-thread, so I just do export OMP_NUM_THREADS=24 to use all available cpus . When running Petsc/Mumps I have to do export OMP_NUM_THREADS=1, otherwise I get very weird cpu utilization. Perhaps that has something to do with the speed difference? From epscodes at gmail.com Tue Jun 28 15:48:18 2016 From: epscodes at gmail.com (Xiangdong) Date: Tue, 28 Jun 2016 16:48:18 -0400 Subject: [petsc-users] da_overlap and zero pivot row In-Reply-To: <3D5D99B8-C21C-4CDA-8C6C-85CA33A386EC@mcs.anl.gov> References: <3D5D99B8-C21C-4CDA-8C6C-85CA33A386EC@mcs.anl.gov> Message-ID: Let me illustrate my point and question by an example. I have a 1d nonlinear problem with Nx=5 and stencil width 1. When I run it with np=2, processor 1 own cells 1,2,3 (+ ghost 4) and processor 2 own cells 4,5 (+ ghost 3). I also have functions FormFunctionLocal and FormJacobianLocal to compute the residual and Jacobian. i) snes_type newtonls. The Jacobian is in mpiaij format distributed on two processors. processor 1 computes the first three rows of Jac (size 3x5) and processor 1 computes the last two rows of Jac (size 2x5). The code works fine. ii) snes_type nasm and da_overlap 0. Each processor has its own Jac (seqaij). Processor 1 computes its 3x3 Jac and Processor 2 computes its 2x2 Jac. The code works fine. iii) snes_type nasm and da_overlap 1. Each processor needs to computes its own Jac. Processor 1 computes its 4x4 Jac and Processor 2 computes its 3x3 Jac. However, for processor 1 to compute the 4-th row of its Jac, it needs the properties information stored on cell 5, which is not available on processor 1. The zero pivot error is from this wrong Jac for the row corresponding to the overlap cell. The mat_fd_color does not work either for the same reason that information from cell 5 is not available on processor 1. Do you have any suggestion for the overlap case? Thank you. Best, Xiangdong On Mon, Jun 27, 2016 at 4:21 PM, Barry Smith wrote: > > > On Jun 27, 2016, at 3:15 PM, Xiangdong wrote: > > > > Hello everyone, > > > > I am trying different number of da_overlap to see its effects on nasm > and aspin preconditioner. The codes works fine with -da_overlap 0. However, > when I change the option -da_overlap 1, it crashed with the error message > like "zero pivot row 12544 value 0 tolerance 2.2e-14". The option > -pc_factor_nonzeros_along_diagonal does not fix this zero pivot issue. > > > > Do you have any quick suggestions for me to try to fix this issue? > > My guess is that it is bug in the da_overlap business or in the > example; normally I would not expect this to happen. Is this a PETSc > example I can run (tell me example and exact options) to reproduce the > problem? > > Thanks > > Barry > > > > > Thank you. > > > > Best, > > Xiangdong > > -------------- next part -------------- An HTML attachment was scrubbed... URL: From bsmith at mcs.anl.gov Tue Jun 28 16:16:40 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Tue, 28 Jun 2016 16:16:40 -0500 Subject: [petsc-users] da_overlap and zero pivot row In-Reply-To: References: <3D5D99B8-C21C-4CDA-8C6C-85CA33A386EC@mcs.anl.gov> Message-ID: If you make the stencil width as wide at the overlap does the problem go away and you get expected convergence? > On Jun 28, 2016, at 3:48 PM, Xiangdong wrote: > > Let me illustrate my point and question by an example. I have a 1d nonlinear problem with Nx=5 and stencil width 1. When I run it with np=2, processor 1 own cells 1,2,3 (+ ghost 4) and processor 2 own cells 4,5 (+ ghost 3). I also have functions FormFunctionLocal and FormJacobianLocal to compute the residual and Jacobian. > > i) snes_type newtonls. The Jacobian is in mpiaij format distributed on two processors. processor 1 computes the first three rows of Jac (size 3x5) and processor 1 computes the last two rows of Jac (size 2x5). The code works fine. > > ii) snes_type nasm and da_overlap 0. Each processor has its own Jac (seqaij). Processor 1 computes its 3x3 Jac and Processor 2 computes its 2x2 Jac. The code works fine. > > iii) snes_type nasm and da_overlap 1. Each processor needs to computes its own Jac. Processor 1 computes its 4x4 Jac and Processor 2 computes its 3x3 Jac. However, for processor 1 to compute the 4-th row of its Jac, it needs the properties information stored on cell 5, which is not available on processor 1. The zero pivot error is from this wrong Jac for the row corresponding to the overlap cell. The mat_fd_color does not work either for the same reason that information from cell 5 is not available on processor 1. > > Do you have any suggestion for the overlap case? Thank you. > > Best, > Xiangdong > > On Mon, Jun 27, 2016 at 4:21 PM, Barry Smith wrote: > > > On Jun 27, 2016, at 3:15 PM, Xiangdong wrote: > > > > Hello everyone, > > > > I am trying different number of da_overlap to see its effects on nasm and aspin preconditioner. The codes works fine with -da_overlap 0. However, when I change the option -da_overlap 1, it crashed with the error message like "zero pivot row 12544 value 0 tolerance 2.2e-14". The option -pc_factor_nonzeros_along_diagonal does not fix this zero pivot issue. > > > > Do you have any quick suggestions for me to try to fix this issue? > > My guess is that it is bug in the da_overlap business or in the example; normally I would not expect this to happen. Is this a PETSc example I can run (tell me example and exact options) to reproduce the problem? > > Thanks > > Barry > > > > > Thank you. > > > > Best, > > Xiangdong > > From khaipham at utexas.edu Wed Jun 29 09:59:07 2016 From: khaipham at utexas.edu (Khai Pham) Date: Wed, 29 Jun 2016 10:59:07 -0400 Subject: [petsc-users] SNESFAS for an unstructured mesh Message-ID: Hi Petsc-users, I'm looking for the use of nonlinear multigrid method (FAS). I'm wondering if someone could point me to an example of using FAS for an unstructured mesh without using DMPlex in petsc. Thanks ! Khai -------------- next part -------------- An HTML attachment was scrubbed... URL: From epscodes at gmail.com Wed Jun 29 10:23:15 2016 From: epscodes at gmail.com (Xiangdong) Date: Wed, 29 Jun 2016 11:23:15 -0400 Subject: [petsc-users] da_overlap and zero pivot row In-Reply-To: References: <3D5D99B8-C21C-4CDA-8C6C-85CA33A386EC@mcs.anl.gov> Message-ID: The code got trapped in a while loop when I switch to s=2. http://www.mcs.anl.gov/petsc/petsc-current/src/dm/impls/da/dadd.c.html In dadd.c line 85-96 /* gone out of processor range on y axis */ 86: while(jj > ne-1 || jj < ns) { 87: if (nr == n-1) { 88: ns = 0; 89: ne = ly[0]; 90: nr = 0; 91: } else { 92: nr++; 93: ns = ne; 94: ne += ly[nr]; 95: } 96: } For my case nx=5,ny=5,nz=1,s=2, np=2, snes_type nasm, the code is trapped in the loop for jj=-1, ns=0, nr=0, n=1. This negative jj comes from the line 340-349 of same file. /* global and subdomain ISes for the local indices of the subdomain */ 341: /* todo - make this not loop over at nonperiodic boundaries, which will be more involved */ 342: lower.i = subinfo.gxs; 343: lower.j = subinfo.gys; 344: lower.k = subinfo.gzs; 345: upper.i = subinfo.gxs+subinfo.gxm; 346: upper.j = subinfo.gys+subinfo.gym; 347: upper.k = subinfo.gzs+subinfo.gzm; 349: DMDACreatePatchIS(dm,&lower,&upper,&gdis); When trapped, subinfo.gxs=-2. Since there is a todo comment, I am not sure this is the reason for the while loop trap. Thanks. Xiangdong On Tue, Jun 28, 2016 at 5:16 PM, Barry Smith wrote: > > If you make the stencil width as wide at the overlap does the problem go > away and you get expected convergence? > > > On Jun 28, 2016, at 3:48 PM, Xiangdong wrote: > > > > Let me illustrate my point and question by an example. I have a 1d > nonlinear problem with Nx=5 and stencil width 1. When I run it with np=2, > processor 1 own cells 1,2,3 (+ ghost 4) and processor 2 own cells 4,5 (+ > ghost 3). I also have functions FormFunctionLocal and FormJacobianLocal to > compute the residual and Jacobian. > > > > i) snes_type newtonls. The Jacobian is in mpiaij format distributed on > two processors. processor 1 computes the first three rows of Jac (size 3x5) > and processor 1 computes the last two rows of Jac (size 2x5). The code > works fine. > > > > ii) snes_type nasm and da_overlap 0. Each processor has its own Jac > (seqaij). Processor 1 computes its 3x3 Jac and Processor 2 computes its 2x2 > Jac. The code works fine. > > > > iii) snes_type nasm and da_overlap 1. Each processor needs to computes > its own Jac. Processor 1 computes its 4x4 Jac and Processor 2 computes its > 3x3 Jac. However, for processor 1 to compute the 4-th row of its Jac, it > needs the properties information stored on cell 5, which is not available > on processor 1. The zero pivot error is from this wrong Jac for the row > corresponding to the overlap cell. The mat_fd_color does not work either > for the same reason that information from cell 5 is not available on > processor 1. > > > > Do you have any suggestion for the overlap case? Thank you. > > > > Best, > > Xiangdong > > > > On Mon, Jun 27, 2016 at 4:21 PM, Barry Smith wrote: > > > > > On Jun 27, 2016, at 3:15 PM, Xiangdong wrote: > > > > > > Hello everyone, > > > > > > I am trying different number of da_overlap to see its effects on nasm > and aspin preconditioner. The codes works fine with -da_overlap 0. However, > when I change the option -da_overlap 1, it crashed with the error message > like "zero pivot row 12544 value 0 tolerance 2.2e-14". The option > -pc_factor_nonzeros_along_diagonal does not fix this zero pivot issue. > > > > > > Do you have any quick suggestions for me to try to fix this issue? > > > > My guess is that it is bug in the da_overlap business or in the > example; normally I would not expect this to happen. Is this a PETSc > example I can run (tell me example and exact options) to reproduce the > problem? > > > > Thanks > > > > Barry > > > > > > > > Thank you. > > > > > > Best, > > > Xiangdong > > > > > > -------------- next part -------------- An HTML attachment was scrubbed... URL: From epscodes at gmail.com Wed Jun 29 10:49:40 2016 From: epscodes at gmail.com (Xiangdong) Date: Wed, 29 Jun 2016 11:49:40 -0400 Subject: [petsc-users] da_overlap and zero pivot row In-Reply-To: References: <3D5D99B8-C21C-4CDA-8C6C-85CA33A386EC@mcs.anl.gov> Message-ID: To make things easier, I created a simple example here: https://drive.google.com/file/d/0BxEfb1tasJxhOHJWbVJ0ZGl0LTA/view?usp=sharing ./exe -snes_newtonls okay. ./exe -snes_nasm -da_grid_z 2 okay ./exe -snes_nasm failed. It got trapped in the while loop. Do you have any suggestions to avoid this trap for nz=1? Thanks. Xiangdong On Wed, Jun 29, 2016 at 11:23 AM, Xiangdong wrote: > The code got trapped in a while loop when I switch to s=2. > > http://www.mcs.anl.gov/petsc/petsc-current/src/dm/impls/da/dadd.c.html > > In dadd.c line 85-96 > /* gone out of processor range on y axis */ > 86: while(jj > ne-1 || jj < ns) { > 87: if (nr == n-1) { > 88: ns = 0; > 89: ne = ly[0]; > 90: nr = 0; > 91: } else { > 92: nr++; > 93: ns = ne; > 94: ne += ly[nr]; > 95: } > 96: } > > For my case nx=5,ny=5,nz=1,s=2, np=2, snes_type nasm, the code is trapped > in the loop for jj=-1, ns=0, nr=0, n=1. This negative jj comes from the > line 340-349 of same file. > > /* global and subdomain ISes for the local indices of the subdomain */ > 341: /* todo - make this not loop over at nonperiodic boundaries, > which will be more involved */ > 342: lower.i = subinfo.gxs; > 343: lower.j = subinfo.gys; > 344: lower.k = subinfo.gzs; > 345: upper.i = subinfo.gxs+subinfo.gxm; > 346: upper.j = subinfo.gys+subinfo.gym; > 347: upper.k = subinfo.gzs+subinfo.gzm; > > 349: DMDACreatePatchIS(dm,&lower,&upper,&gdis); > > When trapped, subinfo.gxs=-2. Since there is a todo comment, I am not sure > this is the reason for the while loop trap. > > Thanks. > > Xiangdong > > > On Tue, Jun 28, 2016 at 5:16 PM, Barry Smith wrote: > >> >> If you make the stencil width as wide at the overlap does the problem >> go away and you get expected convergence? >> >> > On Jun 28, 2016, at 3:48 PM, Xiangdong wrote: >> > >> > Let me illustrate my point and question by an example. I have a 1d >> nonlinear problem with Nx=5 and stencil width 1. When I run it with np=2, >> processor 1 own cells 1,2,3 (+ ghost 4) and processor 2 own cells 4,5 (+ >> ghost 3). I also have functions FormFunctionLocal and FormJacobianLocal to >> compute the residual and Jacobian. >> > >> > i) snes_type newtonls. The Jacobian is in mpiaij format distributed on >> two processors. processor 1 computes the first three rows of Jac (size 3x5) >> and processor 1 computes the last two rows of Jac (size 2x5). The code >> works fine. >> > >> > ii) snes_type nasm and da_overlap 0. Each processor has its own Jac >> (seqaij). Processor 1 computes its 3x3 Jac and Processor 2 computes its 2x2 >> Jac. The code works fine. >> > >> > iii) snes_type nasm and da_overlap 1. Each processor needs to computes >> its own Jac. Processor 1 computes its 4x4 Jac and Processor 2 computes its >> 3x3 Jac. However, for processor 1 to compute the 4-th row of its Jac, it >> needs the properties information stored on cell 5, which is not available >> on processor 1. The zero pivot error is from this wrong Jac for the row >> corresponding to the overlap cell. The mat_fd_color does not work either >> for the same reason that information from cell 5 is not available on >> processor 1. >> > >> > Do you have any suggestion for the overlap case? Thank you. >> > >> > Best, >> > Xiangdong >> > >> > On Mon, Jun 27, 2016 at 4:21 PM, Barry Smith >> wrote: >> > >> > > On Jun 27, 2016, at 3:15 PM, Xiangdong wrote: >> > > >> > > Hello everyone, >> > > >> > > I am trying different number of da_overlap to see its effects on nasm >> and aspin preconditioner. The codes works fine with -da_overlap 0. However, >> when I change the option -da_overlap 1, it crashed with the error message >> like "zero pivot row 12544 value 0 tolerance 2.2e-14". The option >> -pc_factor_nonzeros_along_diagonal does not fix this zero pivot issue. >> > > >> > > Do you have any quick suggestions for me to try to fix this issue? >> > >> > My guess is that it is bug in the da_overlap business or in the >> example; normally I would not expect this to happen. Is this a PETSc >> example I can run (tell me example and exact options) to reproduce the >> problem? >> > >> > Thanks >> > >> > Barry >> > >> > > >> > > Thank you. >> > > >> > > Best, >> > > Xiangdong >> > >> > >> >> > -------------- next part -------------- An HTML attachment was scrubbed... URL: From faraz_hussain at yahoo.com Wed Jun 29 11:07:47 2016 From: faraz_hussain at yahoo.com (Faraz Hussain) Date: Wed, 29 Jun 2016 16:07:47 +0000 (UTC) Subject: [petsc-users] Performance of mumps vs. Intel Pardiso In-Reply-To: <1337334190.2752078.1467075579364.JavaMail.yahoo@mail.yahoo.com> References: <1337334190.2752078.1467075579364.JavaMail.yahoo.ref@mail.yahoo.com> <1337334190.2752078.1467075579364.JavaMail.yahoo@mail.yahoo.com> Message-ID: <781294040.3740649.1467216467855.JavaMail.yahoo@mail.yahoo.com> I reviewed the code for how the matrix is being solved in Intel Paridso. It seems the matrix is getting reordered and sorted before calling Pardiso. I am not sure the reason for this. I know I need to ask the original developer of the application, but they are no longer responding. Is there something I am misunderstanding about how matrix's need to be re-ordered? I am assuming the metis or scotch algorithm does the reordering for me when using Mumps? Or am I supposed to reorder/sort it myself before calling Mumps? From vijay.m at gmail.com Wed Jun 29 11:14:27 2016 From: vijay.m at gmail.com (Vijay S. Mahadevan) Date: Wed, 29 Jun 2016 11:14:27 -0500 Subject: [petsc-users] SNESFAS for an unstructured mesh In-Reply-To: References: Message-ID: Khai, There is DMMoab in PETSc that can handle unstructured meshes and I am currently refining and preparing a PR to PETSc that includes features to support geometric multigrid. I do not have an example yet to use FAS as a solver but can create one for an unstructured grid. Are there any particular features that you are looking for in the example ? Why is DMPlex not an option for you ? Vijay On Wed, Jun 29, 2016 at 9:59 AM, Khai Pham wrote: > Hi Petsc-users, > > I'm looking for the use of nonlinear multigrid method (FAS). I'm wondering > if someone could point me to an example of using FAS for an unstructured > mesh without using DMPlex in petsc. Thanks ! > > Khai From hzhang at mcs.anl.gov Wed Jun 29 13:17:30 2016 From: hzhang at mcs.anl.gov (Hong) Date: Wed, 29 Jun 2016 13:17:30 -0500 Subject: [petsc-users] Performance of mumps vs. Intel Pardiso In-Reply-To: <781294040.3740649.1467216467855.JavaMail.yahoo@mail.yahoo.com> References: <1337334190.2752078.1467075579364.JavaMail.yahoo.ref@mail.yahoo.com> <1337334190.2752078.1467075579364.JavaMail.yahoo@mail.yahoo.com> <781294040.3740649.1467216467855.JavaMail.yahoo@mail.yahoo.com> Message-ID: Faraz: > I reviewed the code for how the matrix is being solved in Intel Paridso. > It seems the matrix is getting reordered and sorted before calling Pardiso. > I am not sure the reason for this. I know I need to ask the original > developer of the application, but they are no longer responding. > > Is there something I am misunderstanding about how matrix's need to be > re-ordered? I am assuming the metis or scotch algorithm does the reordering > for me when using Mumps? Or am I supposed to reorder/sort it myself before > calling Mumps? > Mumps uses parmetis or scotch for parallel symbolic factorization. For sequential symbolic factorization, it has several matrix orderings, which you can experiment with the option '-mat_mumps_icntl_7 <>'. I doubt any of these ordering would match the performance of Pardiso. Again, how large is your matrix? How do you run Pardiso in parallel? Can you use Pardiso on large matrices as mumps? Hong -------------- next part -------------- An HTML attachment was scrubbed... URL: From it.sadr at gmail.com Wed Jun 29 13:43:12 2016 From: it.sadr at gmail.com (ehsan sadrfaridpour) Date: Wed, 29 Jun 2016 14:43:12 -0400 Subject: [petsc-users] How to have a local copy (sequential) of a parallel matrix Message-ID: Hi, I need to have access to most of elements of a parallel MPIAIJ matrix only from 1 process (rank 0). I tried to copy or duplicate it to SEQAIJ, but I faced problems. How can I have a local copy of a matrix which is distributed on multiple process? I don't want to update the matrix, and the read-only version of it would be enough. Best, Ehsan -------------- next part -------------- An HTML attachment was scrubbed... URL: From khaipham at utexas.edu Wed Jun 29 13:47:57 2016 From: khaipham at utexas.edu (Khai Pham) Date: Wed, 29 Jun 2016 14:47:57 -0400 Subject: [petsc-users] SNESFAS for an unstructured mesh In-Reply-To: References: Message-ID: Hi Vijay, Thanks for your response. Is DMMoad is other special kind of data structure in Petsc? I'd like to use the petsc FAS for the finite element code in our group and all the data structure for mesh topology is all set. Thus I try to avoid all petsc data structure. As far as I know the FAS will construct the coarse solution based on DM for structured grid and DMPlex for unstructured grid as in ex12. Would it be possible to use FAS without using petsc DM/DMPlex by adding extra code? How much effort would you estimate? Thanks ! On Wed, Jun 29, 2016 at 12:14 PM, Vijay S. Mahadevan wrote: > Khai, > > There is DMMoab in PETSc that can handle unstructured meshes and I am > currently refining and preparing a PR to PETSc that includes features > to support geometric multigrid. I do not have an example yet to use > FAS as a solver but can create one for an unstructured grid. Are there > any particular features that you are looking for in the example ? Why > is DMPlex not an option for you ? > > Vijay > > On Wed, Jun 29, 2016 at 9:59 AM, Khai Pham wrote: > > Hi Petsc-users, > > > > I'm looking for the use of nonlinear multigrid method (FAS). I'm > wondering > > if someone could point me to an example of using FAS for an unstructured > > mesh without using DMPlex in petsc. Thanks ! > > > > Khai > -------------- next part -------------- An HTML attachment was scrubbed... URL: From lawrence.mitchell at imperial.ac.uk Wed Jun 29 13:58:27 2016 From: lawrence.mitchell at imperial.ac.uk (Lawrence Mitchell) Date: Wed, 29 Jun 2016 19:58:27 +0100 Subject: [petsc-users] SNESFAS for an unstructured mesh In-Reply-To: References: Message-ID: > On 29 Jun 2016, at 19:47, Khai Pham wrote: > > Thanks for your response. Is DMMoad is other special kind of data structure in Petsc? I'd like to use the petsc FAS for the finite element code in our group and all the data structure for mesh topology is all set. Thus I try to avoid all petsc data structure. As far as I know the FAS will construct the coarse solution based on DM for structured grid and DMPlex for unstructured grid as in ex12. Would it be possible to use FAS without using petsc DM/DMPlex by adding extra code? How much effort would you estimate? Thanks ! You can use a DMShell and just implement the needed grid transfer operations using your own data structures and then use the DMShellSetXXX interfaces to hook them up. Lawrence From bsmith at mcs.anl.gov Wed Jun 29 14:11:13 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Wed, 29 Jun 2016 14:11:13 -0500 Subject: [petsc-users] How to have a local copy (sequential) of a parallel matrix In-Reply-To: References: Message-ID: MatGetSubmatrices() just have the first process request all the rows and columns and the others request none. You can use ISCreateStride() to create the ISs without having to make an array of all the indices. > On Jun 29, 2016, at 1:43 PM, ehsan sadrfaridpour wrote: > > Hi, > > I need to have access to most of elements of a parallel MPIAIJ matrix only from 1 process (rank 0). > I tried to copy or duplicate it to SEQAIJ, but I faced problems. > > How can I have a local copy of a matrix which is distributed on multiple process? I don't want to update the matrix, and the read-only version of it would be enough. > > Best, > Ehsan > > From it.sadr at gmail.com Wed Jun 29 14:19:23 2016 From: it.sadr at gmail.com (ehsan sadrfaridpour) Date: Wed, 29 Jun 2016 15:19:23 -0400 Subject: [petsc-users] How to have a local copy (sequential) of a parallel matrix In-Reply-To: References: Message-ID: Thanks a lot for great support. On Wed, Jun 29, 2016 at 3:11 PM, Barry Smith wrote: > > MatGetSubmatrices() just have the first process request all the rows > and columns and the others request none. You can use ISCreateStride() to > create the ISs without having to make an array of all the indices. > > > > On Jun 29, 2016, at 1:43 PM, ehsan sadrfaridpour > wrote: > > > > Hi, > > > > I need to have access to most of elements of a parallel MPIAIJ matrix > only from 1 process (rank 0). > > I tried to copy or duplicate it to SEQAIJ, but I faced problems. > > > > How can I have a local copy of a matrix which is distributed on multiple > process? I don't want to update the matrix, and the read-only version of it > would be enough. > > > > Best, > > Ehsan > > > > > > -------------- next part -------------- An HTML attachment was scrubbed... URL: From vijay.m at gmail.com Wed Jun 29 14:41:23 2016 From: vijay.m at gmail.com (Vijay S. Mahadevan) Date: Wed, 29 Jun 2016 14:41:23 -0500 Subject: [petsc-users] SNESFAS for an unstructured mesh In-Reply-To: References: Message-ID: >> Thanks for your response. Is DMMoad is other special kind of data structure in Petsc? DMMoab is a concrete implementation of the DM object, which uses MOAB mesh database underneath. > Would it be possible to use FAS without using petsc DM/DMPlex by adding extra code? If you have your own mesh handling code, as Lawrence suggests, use a DMShell object and create appropriate wrapper routines that utilizes your home grown API underneath. There is a linear solver example with DMShell, which should help you get started. Instead of the DA object reference used in the shell implementation, you can replace it with your own structures and context. http://www.mcs.anl.gov/petsc/petsc-current/src/ksp/ksp/examples/tutorials/ex65.c.html Vijay On Wed, Jun 29, 2016 at 1:58 PM, Lawrence Mitchell wrote: > > >> On 29 Jun 2016, at 19:47, Khai Pham wrote: >> >> Thanks for your response. Is DMMoad is other special kind of data structure in Petsc? I'd like to use the petsc FAS for the finite element code in our group and all the data structure for mesh topology is all set. Thus I try to avoid all petsc data structure. As far as I know the FAS will construct the coarse solution based on DM for structured grid and DMPlex for unstructured grid as in ex12. Would it be possible to use FAS without using petsc DM/DMPlex by adding extra code? How much effort would you estimate? Thanks ! > > You can use a DMShell and just implement the needed grid transfer operations using your own data structures and then use the DMShellSetXXX interfaces to hook them up. > > Lawrence From faraz_hussain at yahoo.com Wed Jun 29 14:46:52 2016 From: faraz_hussain at yahoo.com (Faraz Hussain) Date: Wed, 29 Jun 2016 19:46:52 +0000 (UTC) Subject: [petsc-users] Performance of mumps vs. Intel Pardiso In-Reply-To: References: <1337334190.2752078.1467075579364.JavaMail.yahoo.ref@mail.yahoo.com> <1337334190.2752078.1467075579364.JavaMail.yahoo@mail.yahoo.com> <781294040.3740649.1467216467855.JavaMail.yahoo@mail.yahoo.com> Message-ID: <213496802.3843456.1467229612250.JavaMail.yahoo@mail.yahoo.com> >Mumps uses parmetis or scotch for parallel symbolic factorization. For sequential symbolic >factorization, it has several matrix orderings, which you can experiment with the option >'-mat_mumps_icntl_7 <>'. > I doubt any of these ordering would match the performance of Pardiso. Thanks, I have been experimenting with the different ordering options in Mumps. So far I have not seen any speed difference among them. Do you feel Pardiso ordering is so superior to result in 2X increase in speed? I find this hard to believe since my problem is fairly classic and can't imagine why a 10+ year old algorithm would be so much better than what's available today. > Again, how large is your matrix? How do you run Pardiso in parallel? Can you use Pardiso on large matrices as mumps? My matrix is 3million^2 with max 1000 non-zeroes per line. Pardiso supports multi-thread, so I just do export OMP_NUM_THREADS=24 to use all available cpus . When running Petsc/Mumps I have to do export OMP_NUM_THREADS=1, otherwise I get very weird cpu utilization. Perhaps that has something to do with the speed difference? From it.sadr at gmail.com Wed Jun 29 14:54:04 2016 From: it.sadr at gmail.com (ehsan sadrfaridpour) Date: Wed, 29 Jun 2016 15:54:04 -0400 Subject: [petsc-users] How to have a local copy (sequential) of a parallel matrix In-Reply-To: References: Message-ID: I faced the below error during compiling my code for using MatGetSubMatrices. error: cannot convert ?IS {aka _p_IS*}? to ?_p_IS* const*? for argument ?3? > to ?PetscErrorCode MatGetSubMatrices(Mat, PetscInt, _p_IS* const*, _p_IS* > const*, MatReuse, _p_Mat***)? > MatGetSubMatrices(m_WA_norm_T, 1, set, set, MAT_INITIAL_MATRIX, > &m_local_W); > My code : > PetscMPIInt rank; > MPI_Comm_rank(PETSC_COMM_WORLD, &rank); > > if(rank ==0){ > Mat m_local_W; > MatCreateSeqAIJ(PETSC_COMM_SELF,num_points,num_points, num_nz, > NULL,&m_local_W);// try to reserve space for only number of final non zero > entries for each fine node (e.g. 4) > IS set; > ISCreateStride(PETSC_COMM_SELF, num_points, 0, 1, &set_row); > MatGetSubMatrices(m_WA_norm_T, 1, set_row, set_col, > MAT_INITIAL_MATRIX, &m_local_W); > > } > I followed below example: http://www.mcs.anl.gov/petsc/petsc-current/src/vec/is/is/examples/tutorials/ex2.c.html On Wed, Jun 29, 2016 at 3:19 PM, ehsan sadrfaridpour wrote: > Thanks a lot for great support. > > On Wed, Jun 29, 2016 at 3:11 PM, Barry Smith wrote: > >> >> MatGetSubmatrices() just have the first process request all the rows >> and columns and the others request none. You can use ISCreateStride() to >> create the ISs without having to make an array of all the indices. >> >> >> > On Jun 29, 2016, at 1:43 PM, ehsan sadrfaridpour >> wrote: >> > >> > Hi, >> > >> > I need to have access to most of elements of a parallel MPIAIJ matrix >> only from 1 process (rank 0). >> > I tried to copy or duplicate it to SEQAIJ, but I faced problems. >> > >> > How can I have a local copy of a matrix which is distributed on >> multiple process? I don't want to update the matrix, and the read-only >> version of it would be enough. >> > >> > Best, >> > Ehsan >> > >> > >> >> > -------------- next part -------------- An HTML attachment was scrubbed... URL: From bsmith at mcs.anl.gov Wed Jun 29 14:59:25 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Wed, 29 Jun 2016 14:59:25 -0500 Subject: [petsc-users] How to have a local copy (sequential) of a parallel matrix In-Reply-To: References: Message-ID: The call requires arrays of IS so even though you only want one sub matrix you need to pass an array of length 1 which you can do with &set etc > MatGetSubMatrices(m_WA_norm_T, 1, &set, &set, MAT_INITIAL_MATRIX, &m_local_W); > On Jun 29, 2016, at 2:54 PM, ehsan sadrfaridpour wrote: > > I faced the below error during compiling my code for using MatGetSubMatrices. > > error: cannot convert ?IS {aka _p_IS*}? to ?_p_IS* const*? for argument ?3? to ?PetscErrorCode MatGetSubMatrices(Mat, PetscInt, _p_IS* const*, _p_IS* const*, MatReuse, _p_Mat***)? > MatGetSubMatrices(m_WA_norm_T, 1, set, set, MAT_INITIAL_MATRIX, &m_local_W); > > My code : > PetscMPIInt rank; > MPI_Comm_rank(PETSC_COMM_WORLD, &rank); > > if(rank ==0){ > Mat m_local_W; > MatCreateSeqAIJ(PETSC_COMM_SELF,num_points,num_points, num_nz, NULL,&m_local_W);// try to reserve space for only number of final non zero entries for each fine node (e.g. 4) > IS set; > ISCreateStride(PETSC_COMM_SELF, num_points, 0, 1, &set_row); > MatGetSubMatrices(m_WA_norm_T, 1, set_row, set_col, MAT_INITIAL_MATRIX, &m_local_W); > > } > > I followed below example: > http://www.mcs.anl.gov/petsc/petsc-current/src/vec/is/is/examples/tutorials/ex2.c.html > > > > > > > On Wed, Jun 29, 2016 at 3:19 PM, ehsan sadrfaridpour wrote: > Thanks a lot for great support. > > On Wed, Jun 29, 2016 at 3:11 PM, Barry Smith wrote: > > MatGetSubmatrices() just have the first process request all the rows and columns and the others request none. You can use ISCreateStride() to create the ISs without having to make an array of all the indices. > > > > On Jun 29, 2016, at 1:43 PM, ehsan sadrfaridpour wrote: > > > > Hi, > > > > I need to have access to most of elements of a parallel MPIAIJ matrix only from 1 process (rank 0). > > I tried to copy or duplicate it to SEQAIJ, but I faced problems. > > > > How can I have a local copy of a matrix which is distributed on multiple process? I don't want to update the matrix, and the read-only version of it would be enough. > > > > Best, > > Ehsan > > > > > > > From dave.mayhem23 at gmail.com Wed Jun 29 15:03:46 2016 From: dave.mayhem23 at gmail.com (Dave May) Date: Wed, 29 Jun 2016 22:03:46 +0200 Subject: [petsc-users] How to have a local copy (sequential) of a parallel matrix In-Reply-To: References: Message-ID: On Wednesday, 29 June 2016, ehsan sadrfaridpour wrote: > I faced the below error during compiling my code for using > MatGetSubMatrices. > > error: cannot convert ?IS {aka _p_IS*}? to ?_p_IS* const*? for argument >> ?3? to ?PetscErrorCode MatGetSubMatrices(Mat, PetscInt, _p_IS* const*, >> _p_IS* const*, MatReuse, _p_Mat***)? >> MatGetSubMatrices(m_WA_norm_T, 1, set, set, MAT_INITIAL_MATRIX, >> &m_local_W); >> > > My code : > >> PetscMPIInt rank; >> MPI_Comm_rank(PETSC_COMM_WORLD, &rank); >> >> if(rank ==0){ >> Mat m_local_W; >> MatCreateSeqAIJ(PETSC_COMM_SELF,num_points,num_points, num_nz, >> NULL,&m_local_W);// try to reserve space for only number of final non zero >> entries for each fine node (e.g. 4) >> IS set; >> ISCreateStride(PETSC_COMM_SELF, num_points, 0, 1, &set_row); >> MatGetSubMatrices(m_WA_norm_T, 1, set_row, set_col, >> MAT_INITIAL_MATRIX, &m_local_W); >> >> } >> > > I followed below example: > > http://www.mcs.anl.gov/petsc/petsc-current/src/vec/is/is/examples/tutorials/ex2.c.html > This code won't work in parallel. The man page says this function is collective on Mat. You need to move the call to MatGetSubMatrices outside of the if(rank==0) loop. > > > > > > On Wed, Jun 29, 2016 at 3:19 PM, ehsan sadrfaridpour > wrote: > >> Thanks a lot for great support. >> >> On Wed, Jun 29, 2016 at 3:11 PM, Barry Smith > > wrote: >> >>> >>> MatGetSubmatrices() just have the first process request all the rows >>> and columns and the others request none. You can use ISCreateStride() to >>> create the ISs without having to make an array of all the indices. >>> >>> >>> > On Jun 29, 2016, at 1:43 PM, ehsan sadrfaridpour >> > wrote: >>> > >>> > Hi, >>> > >>> > I need to have access to most of elements of a parallel MPIAIJ matrix >>> only from 1 process (rank 0). >>> > I tried to copy or duplicate it to SEQAIJ, but I faced problems. >>> > >>> > How can I have a local copy of a matrix which is distributed on >>> multiple process? I don't want to update the matrix, and the read-only >>> version of it would be enough. >>> > >>> > Best, >>> > Ehsan >>> > >>> > >>> >>> >> > -------------- next part -------------- An HTML attachment was scrubbed... URL: From hzhang at mcs.anl.gov Wed Jun 29 15:05:56 2016 From: hzhang at mcs.anl.gov (Hong) Date: Wed, 29 Jun 2016 15:05:56 -0500 Subject: [petsc-users] Performance of mumps vs. Intel Pardiso In-Reply-To: <213496802.3843456.1467229612250.JavaMail.yahoo@mail.yahoo.com> References: <1337334190.2752078.1467075579364.JavaMail.yahoo.ref@mail.yahoo.com> <1337334190.2752078.1467075579364.JavaMail.yahoo@mail.yahoo.com> <781294040.3740649.1467216467855.JavaMail.yahoo@mail.yahoo.com> <213496802.3843456.1467229612250.JavaMail.yahoo@mail.yahoo.com> Message-ID: Faraz: > >Mumps uses parmetis or scotch for parallel symbolic factorization. For > sequential symbolic >factorization, it has several matrix orderings, which > you can experiment with the option >'-mat_mumps_icntl_7 <>'. > > I doubt any of these ordering would match the performance of Pardiso. > > Thanks, I have been experimenting with the different ordering options in > Mumps. So far I have not seen any speed difference among them. Do you feel > Pardiso ordering is so superior to result in 2X increase in speed? I find > this hard to believe since my problem is fairly classic and can't imagine > why a 10+ year old algorithm would be so much better than what's available > today. > > I do not think Pardiso has much algorithmic superior over mumps. > > > Again, how large is your matrix? How do you run Pardiso in parallel? Can > you use Pardiso on large matrices as mumps? > > My matrix is 3million^2 with max 1000 non-zeroes per line. Pardiso > supports multi-thread, so I just do export OMP_NUM_THREADS=24 to use all > available cpus . When running Petsc/Mumps I have to do export > OMP_NUM_THREADS=1, otherwise I get very weird cpu utilization. Perhaps that > has something to do with the speed difference? > Taking advantage of computer architecture likely makes Pardiso superior. Hong -------------- next part -------------- An HTML attachment was scrubbed... URL: From it.sadr at gmail.com Wed Jun 29 15:24:51 2016 From: it.sadr at gmail.com (ehsan sadrfaridpour) Date: Wed, 29 Jun 2016 16:24:51 -0400 Subject: [petsc-users] How to have a local copy (sequential) of a parallel matrix In-Reply-To: References: Message-ID: Thanks, the IS problem is solved. But now I have another problem to compile the code. *I use below code:* > Mat m_WA_nt_local; > MatCreateSeqAIJ(PETSC_COMM_SELF,num_points,num_points, > Config_params::getInstance()->get_pre_init_loader_matrix(), NULL, > &m_WA_nt_local); > IS set; > if(rank ==0){ > ISCreateStride(PETSC_COMM_SELF, num_points, 0, 1, &set); > ISView(set, PETSC_VIEWER_STDOUT_SELF); > } > MatGetSubMatrices(m_WA_norm_T, 1, &set, &set, MAT_INITIAL_MATRIX, > &m_WA_nt_local); > *The error I get is :* > error: cannot convert ?_p_Mat**? to ?_p_Mat***? for argument ?6? to > ?PetscErrorCode MatGetSubMatrices(Mat, PetscInt, _p_IS* const*, _p_IS* > const*, MatReuse, _p_Mat***)? > MatGetSubMatrices(m_WA_norm_T, 1, &set, &set, MAT_INITIAL_MATRIX, > &m_WA_nt_local); > *I tried to go around it by define a array of Matrices using "Mat * m_WA_nt_local"* So, the first 2 lines changed to below and I can compile the code. > Mat * m_WA_nt_local; > MatCreateSeqAIJ(PETSC_COMM_SELF,num_points,num_points, > Config_params::getInstance()->get_pre_init_loader_matrix(), NULL, > m_WA_nt_local); > *However, I get errors like below when I run the code with 2 mpi process.* > --------------------- Error Message > -------------------------------------------------------------- > [1]PETSC ERROR: Invalid argument > [1]PETSC ERROR: Wrong type of object: Parameter # 3 > [1]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html > for trouble shooting. > [1]PETSC ERROR: Petsc Release Version 3.6.3, unknown > [1]PETSC ERROR: ut_main on a linux-cxx-debug named grappelli by esfp Wed > Jun 29 16:21:04 2016 > [1]PETSC ERROR: Configure options PETSC_ARCH=linux-cxx-debug --with-cc=gcc > --with-cxx=g++ --with-clanguage=c++ --with-gnu-compilers=1 > --with-mpi-compilers=1 --with-debugging=1 --with-shared-libraries=1 > --download-openmpi=1 --download-f2cblaslapack --download-superlu_dist=1 > --download-superlu=1 --download-metis=1 --download-parmetis=1 > --download-blacs=1 --with-hdf5 --with-hdf5-dir=/usr/local/hdf5/ > [1]PETSC ERROR: #1 MatGetSubMatrices() line 6605 in > /home/esfp/tools/libraries/petsc/src/mat/interface/matrix.c > *I think I need to do something for other processes, but I don't know what I need to do.* Best, Ehsan On Wed, Jun 29, 2016 at 4:03 PM, Dave May wrote: > > > On Wednesday, 29 June 2016, ehsan sadrfaridpour wrote: > >> I faced the below error during compiling my code for using >> MatGetSubMatrices. >> >> error: cannot convert ?IS {aka _p_IS*}? to ?_p_IS* const*? for argument >>> ?3? to ?PetscErrorCode MatGetSubMatrices(Mat, PetscInt, _p_IS* const*, >>> _p_IS* const*, MatReuse, _p_Mat***)? >>> MatGetSubMatrices(m_WA_norm_T, 1, set, set, MAT_INITIAL_MATRIX, >>> &m_local_W); >>> >> >> My code : >> >>> PetscMPIInt rank; >>> MPI_Comm_rank(PETSC_COMM_WORLD, &rank); >>> >>> if(rank ==0){ >>> Mat m_local_W; >>> MatCreateSeqAIJ(PETSC_COMM_SELF,num_points,num_points, num_nz, >>> NULL,&m_local_W);// try to reserve space for only number of final non zero >>> entries for each fine node (e.g. 4) >>> IS set; >>> ISCreateStride(PETSC_COMM_SELF, num_points, 0, 1, &set_row); >>> MatGetSubMatrices(m_WA_norm_T, 1, set_row, set_col, >>> MAT_INITIAL_MATRIX, &m_local_W); >>> >>> } >>> >> >> I followed below example: >> >> http://www.mcs.anl.gov/petsc/petsc-current/src/vec/is/is/examples/tutorials/ex2.c.html >> > > This code won't work in parallel. > The man page says this function is collective on Mat. You need to move the > call to MatGetSubMatrices outside of the if(rank==0) loop. > > > >> >> >> >> >> >> On Wed, Jun 29, 2016 at 3:19 PM, ehsan sadrfaridpour >> wrote: >> >>> Thanks a lot for great support. >>> >>> On Wed, Jun 29, 2016 at 3:11 PM, Barry Smith wrote: >>> >>>> >>>> MatGetSubmatrices() just have the first process request all the rows >>>> and columns and the others request none. You can use ISCreateStride() to >>>> create the ISs without having to make an array of all the indices. >>>> >>>> >>>> > On Jun 29, 2016, at 1:43 PM, ehsan sadrfaridpour >>>> wrote: >>>> > >>>> > Hi, >>>> > >>>> > I need to have access to most of elements of a parallel MPIAIJ matrix >>>> only from 1 process (rank 0). >>>> > I tried to copy or duplicate it to SEQAIJ, but I faced problems. >>>> > >>>> > How can I have a local copy of a matrix which is distributed on >>>> multiple process? I don't want to update the matrix, and the read-only >>>> version of it would be enough. >>>> > >>>> > Best, >>>> > Ehsan >>>> > >>>> > >>>> >>>> >>> >> -------------- next part -------------- An HTML attachment was scrubbed... URL: From bsmith at mcs.anl.gov Wed Jun 29 15:31:40 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Wed, 29 Jun 2016 15:31:40 -0500 Subject: [petsc-users] How to have a local copy (sequential) of a parallel matrix In-Reply-To: References: Message-ID: <1618DCDA-7859-49BD-BCAF-F4BD08DF1BAF@mcs.anl.gov> On all other processes don't pass in 1 pass in 0 since all other processes want 0 sub matrices > On Jun 29, 2016, at 3:24 PM, ehsan sadrfaridpour wrote: > > Thanks, the IS problem is solved. > But now I have another problem to compile the code. > > I use below code: > Mat m_WA_nt_local; > MatCreateSeqAIJ(PETSC_COMM_SELF,num_points,num_points, Config_params::getInstance()->get_pre_init_loader_matrix(), NULL, &m_WA_nt_local); > IS set; > if(rank ==0){ > ISCreateStride(PETSC_COMM_SELF, num_points, 0, 1, &set); > ISView(set, PETSC_VIEWER_STDOUT_SELF); > } > MatGetSubMatrices(m_WA_norm_T, 1, &set, &set, MAT_INITIAL_MATRIX, &m_WA_nt_local); > > The error I get is : > error: cannot convert ?_p_Mat**? to ?_p_Mat***? for argument ?6? to ?PetscErrorCode MatGetSubMatrices(Mat, PetscInt, _p_IS* const*, _p_IS* const*, MatReuse, _p_Mat***)? > MatGetSubMatrices(m_WA_norm_T, 1, &set, &set, MAT_INITIAL_MATRIX, &m_WA_nt_local); > > > I tried to go around it by define a array of Matrices using "Mat * m_WA_nt_local" > So, the first 2 lines changed to below and I can compile the code. > Mat * m_WA_nt_local; > MatCreateSeqAIJ(PETSC_COMM_SELF,num_points,num_points, Config_params::getInstance()->get_pre_init_loader_matrix(), NULL, m_WA_nt_local); > > > > However, I get errors like below when I run the code with 2 mpi process. > --------------------- Error Message -------------------------------------------------------------- > [1]PETSC ERROR: Invalid argument > [1]PETSC ERROR: Wrong type of object: Parameter # 3 > [1]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. > [1]PETSC ERROR: Petsc Release Version 3.6.3, unknown > [1]PETSC ERROR: ut_main on a linux-cxx-debug named grappelli by esfp Wed Jun 29 16:21:04 2016 > [1]PETSC ERROR: Configure options PETSC_ARCH=linux-cxx-debug --with-cc=gcc --with-cxx=g++ --with-clanguage=c++ --with-gnu-compilers=1 --with-mpi-compilers=1 --with-debugging=1 --with-shared-libraries=1 --download-openmpi=1 --download-f2cblaslapack --download-superlu_dist=1 --download-superlu=1 --download-metis=1 --download-parmetis=1 --download-blacs=1 --with-hdf5 --with-hdf5-dir=/usr/local/hdf5/ > [1]PETSC ERROR: #1 MatGetSubMatrices() line 6605 in /home/esfp/tools/libraries/petsc/src/mat/interface/matrix.c > > > I think I need to do something for other processes, but I don't know what I need to do. > > Best, > Ehsan > > > > On Wed, Jun 29, 2016 at 4:03 PM, Dave May wrote: > > > On Wednesday, 29 June 2016, ehsan sadrfaridpour wrote: > I faced the below error during compiling my code for using MatGetSubMatrices. > > error: cannot convert ?IS {aka _p_IS*}? to ?_p_IS* const*? for argument ?3? to ?PetscErrorCode MatGetSubMatrices(Mat, PetscInt, _p_IS* const*, _p_IS* const*, MatReuse, _p_Mat***)? > MatGetSubMatrices(m_WA_norm_T, 1, set, set, MAT_INITIAL_MATRIX, &m_local_W); > > My code : > PetscMPIInt rank; > MPI_Comm_rank(PETSC_COMM_WORLD, &rank); > > if(rank ==0){ > Mat m_local_W; > MatCreateSeqAIJ(PETSC_COMM_SELF,num_points,num_points, num_nz, NULL,&m_local_W);// try to reserve space for only number of final non zero entries for each fine node (e.g. 4) > IS set; > ISCreateStride(PETSC_COMM_SELF, num_points, 0, 1, &set_row); > MatGetSubMatrices(m_WA_norm_T, 1, set_row, set_col, MAT_INITIAL_MATRIX, &m_local_W); > > } > > I followed below example: > http://www.mcs.anl.gov/petsc/petsc-current/src/vec/is/is/examples/tutorials/ex2.c.html > > This code won't work in parallel. > The man page says this function is collective on Mat. You need to move the call to MatGetSubMatrices outside of the if(rank==0) loop. > > > > > > > > On Wed, Jun 29, 2016 at 3:19 PM, ehsan sadrfaridpour wrote: > Thanks a lot for great support. > > On Wed, Jun 29, 2016 at 3:11 PM, Barry Smith wrote: > > MatGetSubmatrices() just have the first process request all the rows and columns and the others request none. You can use ISCreateStride() to create the ISs without having to make an array of all the indices. > > > > On Jun 29, 2016, at 1:43 PM, ehsan sadrfaridpour wrote: > > > > Hi, > > > > I need to have access to most of elements of a parallel MPIAIJ matrix only from 1 process (rank 0). > > I tried to copy or duplicate it to SEQAIJ, but I faced problems. > > > > How can I have a local copy of a matrix which is distributed on multiple process? I don't want to update the matrix, and the read-only version of it would be enough. > > > > Best, > > Ehsan > > > > > > > > From it.sadr at gmail.com Wed Jun 29 15:35:26 2016 From: it.sadr at gmail.com (ehsan sadrfaridpour) Date: Wed, 29 Jun 2016 16:35:26 -0400 Subject: [petsc-users] How to have a local copy (sequential) of a parallel matrix In-Reply-To: <1618DCDA-7859-49BD-BCAF-F4BD08DF1BAF@mcs.anl.gov> References: <1618DCDA-7859-49BD-BCAF-F4BD08DF1BAF@mcs.anl.gov> Message-ID: Thanks, it works! On Wed, Jun 29, 2016 at 4:31 PM, Barry Smith wrote: > > On all other processes don't pass in 1 pass in 0 since all other > processes want 0 sub matrices > > > > On Jun 29, 2016, at 3:24 PM, ehsan sadrfaridpour > wrote: > > > > Thanks, the IS problem is solved. > > But now I have another problem to compile the code. > > > > I use below code: > > Mat m_WA_nt_local; > > MatCreateSeqAIJ(PETSC_COMM_SELF,num_points,num_points, > Config_params::getInstance()->get_pre_init_loader_matrix(), NULL, > &m_WA_nt_local); > > IS set; > > if(rank ==0){ > > ISCreateStride(PETSC_COMM_SELF, num_points, 0, 1, &set); > > ISView(set, PETSC_VIEWER_STDOUT_SELF); > > } > > MatGetSubMatrices(m_WA_norm_T, 1, &set, &set, MAT_INITIAL_MATRIX, > &m_WA_nt_local); > > > > The error I get is : > > error: cannot convert ?_p_Mat**? to ?_p_Mat***? for argument ?6? to > ?PetscErrorCode MatGetSubMatrices(Mat, PetscInt, _p_IS* const*, _p_IS* > const*, MatReuse, _p_Mat***)? > > MatGetSubMatrices(m_WA_norm_T, 1, &set, &set, MAT_INITIAL_MATRIX, > &m_WA_nt_local); > > > > > > I tried to go around it by define a array of Matrices using "Mat * > m_WA_nt_local" > > So, the first 2 lines changed to below and I can compile the code. > > Mat * m_WA_nt_local; > > MatCreateSeqAIJ(PETSC_COMM_SELF,num_points,num_points, > Config_params::getInstance()->get_pre_init_loader_matrix(), NULL, > m_WA_nt_local); > > > > > > > > However, I get errors like below when I run the code with 2 mpi process. > > --------------------- Error Message > -------------------------------------------------------------- > > [1]PETSC ERROR: Invalid argument > > [1]PETSC ERROR: Wrong type of object: Parameter # 3 > > [1]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html > for trouble shooting. > > [1]PETSC ERROR: Petsc Release Version 3.6.3, unknown > > [1]PETSC ERROR: ut_main on a linux-cxx-debug named grappelli by esfp Wed > Jun 29 16:21:04 2016 > > [1]PETSC ERROR: Configure options PETSC_ARCH=linux-cxx-debug > --with-cc=gcc --with-cxx=g++ --with-clanguage=c++ --with-gnu-compilers=1 > --with-mpi-compilers=1 --with-debugging=1 --with-shared-libraries=1 > --download-openmpi=1 --download-f2cblaslapack --download-superlu_dist=1 > --download-superlu=1 --download-metis=1 --download-parmetis=1 > --download-blacs=1 --with-hdf5 --with-hdf5-dir=/usr/local/hdf5/ > > [1]PETSC ERROR: #1 MatGetSubMatrices() line 6605 in > /home/esfp/tools/libraries/petsc/src/mat/interface/matrix.c > > > > > > I think I need to do something for other processes, but I don't know > what I need to do. > > > > Best, > > Ehsan > > > > > > > > On Wed, Jun 29, 2016 at 4:03 PM, Dave May > wrote: > > > > > > On Wednesday, 29 June 2016, ehsan sadrfaridpour > wrote: > > I faced the below error during compiling my code for using > MatGetSubMatrices. > > > > error: cannot convert ?IS {aka _p_IS*}? to ?_p_IS* const*? for argument > ?3? to ?PetscErrorCode MatGetSubMatrices(Mat, PetscInt, _p_IS* const*, > _p_IS* const*, MatReuse, _p_Mat***)? > > MatGetSubMatrices(m_WA_norm_T, 1, set, set, MAT_INITIAL_MATRIX, > &m_local_W); > > > > My code : > > PetscMPIInt rank; > > MPI_Comm_rank(PETSC_COMM_WORLD, &rank); > > > > if(rank ==0){ > > Mat m_local_W; > > MatCreateSeqAIJ(PETSC_COMM_SELF,num_points,num_points, num_nz, > NULL,&m_local_W);// try to reserve space for only number of final non zero > entries for each fine node (e.g. 4) > > IS set; > > ISCreateStride(PETSC_COMM_SELF, num_points, 0, 1, &set_row); > > MatGetSubMatrices(m_WA_norm_T, 1, set_row, set_col, > MAT_INITIAL_MATRIX, &m_local_W); > > > > } > > > > I followed below example: > > > http://www.mcs.anl.gov/petsc/petsc-current/src/vec/is/is/examples/tutorials/ex2.c.html > > > > This code won't work in parallel. > > The man page says this function is collective on Mat. You need to move > the call to MatGetSubMatrices outside of the if(rank==0) loop. > > > > > > > > > > > > > > > > On Wed, Jun 29, 2016 at 3:19 PM, ehsan sadrfaridpour > wrote: > > Thanks a lot for great support. > > > > On Wed, Jun 29, 2016 at 3:11 PM, Barry Smith wrote: > > > > MatGetSubmatrices() just have the first process request all the rows > and columns and the others request none. You can use ISCreateStride() to > create the ISs without having to make an array of all the indices. > > > > > > > On Jun 29, 2016, at 1:43 PM, ehsan sadrfaridpour > wrote: > > > > > > Hi, > > > > > > I need to have access to most of elements of a parallel MPIAIJ matrix > only from 1 process (rank 0). > > > I tried to copy or duplicate it to SEQAIJ, but I faced problems. > > > > > > How can I have a local copy of a matrix which is distributed on > multiple process? I don't want to update the matrix, and the read-only > version of it would be enough. > > > > > > Best, > > > Ehsan > > > > > > > > > > > > > > > > -------------- next part -------------- An HTML attachment was scrubbed... URL: From khaipham at utexas.edu Wed Jun 29 20:34:12 2016 From: khaipham at utexas.edu (Khai Pham) Date: Wed, 29 Jun 2016 21:34:12 -0400 Subject: [petsc-users] SNESFAS for an unstructured mesh In-Reply-To: References: Message-ID: Hi Lawrence and Vijay, Thanks for the suggestion. I will look at the ex65 and start from there. On Wed, Jun 29, 2016 at 3:41 PM, Vijay S. Mahadevan wrote: > >> Thanks for your response. Is DMMoad is other special kind of data > structure in Petsc? > > DMMoab is a concrete implementation of the DM object, which uses MOAB > mesh database underneath. > > > Would it be possible to use FAS without using petsc DM/DMPlex by adding > extra code? > > If you have your own mesh handling code, as Lawrence suggests, use a > DMShell object and create appropriate wrapper routines that utilizes > your home grown API underneath. There is a linear solver example with > DMShell, which should help you get started. Instead of the DA object > reference used in the shell implementation, you can replace it with > your own structures and context. > > > http://www.mcs.anl.gov/petsc/petsc-current/src/ksp/ksp/examples/tutorials/ex65.c.html > > Vijay > > On Wed, Jun 29, 2016 at 1:58 PM, Lawrence Mitchell > wrote: > > > > > >> On 29 Jun 2016, at 19:47, Khai Pham wrote: > >> > >> Thanks for your response. Is DMMoad is other special kind of data > structure in Petsc? I'd like to use the petsc FAS for the finite element > code in our group and all the data structure for mesh topology is all set. > Thus I try to avoid all petsc data structure. As far as I know the FAS will > construct the coarse solution based on DM for structured grid and DMPlex > for unstructured grid as in ex12. Would it be possible to use FAS without > using petsc DM/DMPlex by adding extra code? How much effort would you > estimate? Thanks ! > > > > You can use a DMShell and just implement the needed grid transfer > operations using your own data structures and then use the DMShellSetXXX > interfaces to hook them up. > > > > Lawrence > -------------- next part -------------- An HTML attachment was scrubbed... URL: From bsmith at mcs.anl.gov Thu Jun 30 00:15:39 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Thu, 30 Jun 2016 00:15:39 -0500 Subject: [petsc-users] da_overlap and zero pivot row In-Reply-To: References: <3D5D99B8-C21C-4CDA-8C6C-85CA33A386EC@mcs.anl.gov> Message-ID: Xiangdong, I've attached at patch -------------- next part -------------- A non-text attachment was scrubbed... Name: Xiangdong.patch Type: application/octet-stream Size: 3108 bytes Desc: not available URL: -------------- next part -------------- also available in the branch barry/support-dmcreatedomaindecompositionscatters-da-nonperiodic-maint if you are using git. It resolves the current issue by only creating scatters for physical ghost points. BUT I do not know if this fix will get nasm to work properly for a real problem with DMDAs. There may be other problems that come up. Barry > On Jun 29, 2016, at 10:49 AM, Xiangdong wrote: > > To make things easier, I created a simple example here: > > https://drive.google.com/file/d/0BxEfb1tasJxhOHJWbVJ0ZGl0LTA/view?usp=sharing > > ./exe -snes_newtonls okay. > ./exe -snes_nasm -da_grid_z 2 okay > ./exe -snes_nasm failed. It got trapped in the while loop. > > Do you have any suggestions to avoid this trap for nz=1? > > Thanks. > > Xiangdong > > On Wed, Jun 29, 2016 at 11:23 AM, Xiangdong wrote: > The code got trapped in a while loop when I switch to s=2. > > http://www.mcs.anl.gov/petsc/petsc-current/src/dm/impls/da/dadd.c.html > > In dadd.c line 85-96 > /* gone out of processor range on y axis */ > 86: while(jj > ne-1 || jj < ns) { > 87: if (nr == n-1) { > 88: ns = 0; > 89: ne = ly[0]; > 90: nr = 0; > 91: } else { > 92: nr++; > 93: ns = ne; > 94: ne += ly[nr]; > 95: } > 96: } > > For my case nx=5,ny=5,nz=1,s=2, np=2, snes_type nasm, the code is trapped in the loop for jj=-1, ns=0, nr=0, n=1. This negative jj comes from the line 340-349 of same file. > > /* global and subdomain ISes for the local indices of the subdomain */ > 341: /* todo - make this not loop over at nonperiodic boundaries, which will be more involved */ > 342: lower.i = subinfo.gxs; > 343: lower.j = subinfo.gys; > 344: lower.k = subinfo.gzs; > 345: upper.i = subinfo.gxs+subinfo.gxm; > 346: upper.j = subinfo.gys+subinfo.gym; > 347: upper.k = subinfo.gzs+subinfo.gzm; > > 349: DMDACreatePatchIS(dm,&lower,&upper,&gdis); > > When trapped, subinfo.gxs=-2. Since there is a todo comment, I am not sure this is the reason for the while loop trap. > > Thanks. > > Xiangdong > > > On Tue, Jun 28, 2016 at 5:16 PM, Barry Smith wrote: > > If you make the stencil width as wide at the overlap does the problem go away and you get expected convergence? > > > On Jun 28, 2016, at 3:48 PM, Xiangdong wrote: > > > > Let me illustrate my point and question by an example. I have a 1d nonlinear problem with Nx=5 and stencil width 1. When I run it with np=2, processor 1 own cells 1,2,3 (+ ghost 4) and processor 2 own cells 4,5 (+ ghost 3). I also have functions FormFunctionLocal and FormJacobianLocal to compute the residual and Jacobian. > > > > i) snes_type newtonls. The Jacobian is in mpiaij format distributed on two processors. processor 1 computes the first three rows of Jac (size 3x5) and processor 1 computes the last two rows of Jac (size 2x5). The code works fine. > > > > ii) snes_type nasm and da_overlap 0. Each processor has its own Jac (seqaij). Processor 1 computes its 3x3 Jac and Processor 2 computes its 2x2 Jac. The code works fine. > > > > iii) snes_type nasm and da_overlap 1. Each processor needs to computes its own Jac. Processor 1 computes its 4x4 Jac and Processor 2 computes its 3x3 Jac. However, for processor 1 to compute the 4-th row of its Jac, it needs the properties information stored on cell 5, which is not available on processor 1. The zero pivot error is from this wrong Jac for the row corresponding to the overlap cell. The mat_fd_color does not work either for the same reason that information from cell 5 is not available on processor 1. > > > > Do you have any suggestion for the overlap case? Thank you. > > > > Best, > > Xiangdong > > > > On Mon, Jun 27, 2016 at 4:21 PM, Barry Smith wrote: > > > > > On Jun 27, 2016, at 3:15 PM, Xiangdong wrote: > > > > > > Hello everyone, > > > > > > I am trying different number of da_overlap to see its effects on nasm and aspin preconditioner. The codes works fine with -da_overlap 0. However, when I change the option -da_overlap 1, it crashed with the error message like "zero pivot row 12544 value 0 tolerance 2.2e-14". The option -pc_factor_nonzeros_along_diagonal does not fix this zero pivot issue. > > > > > > Do you have any quick suggestions for me to try to fix this issue? > > > > My guess is that it is bug in the da_overlap business or in the example; normally I would not expect this to happen. Is this a PETSc example I can run (tell me example and exact options) to reproduce the problem? > > > > Thanks > > > > Barry > > > > > > > > Thank you. > > > > > > Best, > > > Xiangdong > > > > > > > From constantin.nguyen.van at openmailbox.org Thu Jun 30 08:43:37 2016 From: constantin.nguyen.van at openmailbox.org (Constantin Nguyen Van) Date: Thu, 30 Jun 2016 15:43:37 +0200 Subject: [petsc-users] ISGetTotalIndices with Fortran In-Reply-To: References: Message-ID: Hi again, I've noticed that the same error occurs with the subroutine MatGetRedundantMatrix. Is that possible to add the Fortran interface too? Thank you. Constantin. Le 2016-06-28 16:51, Constantin Nguyen Van a ?crit?: > Alright! > Thank you. > > Constantin. > > Le 2016-06-28 04:54, Barry Smith a ?crit?: >> I have added these fortran interfaces in the branch >> barry/add-missing-apis/maint and merged into the next branch for >> testing. When it passes the tests I will merge it into maint and it >> will then be available in the next patch release. >> >> Barry >> >>> On Jun 27, 2016, at 7:50 AM, Constantin Nguyen Van >>> wrote: >>> >>> Hi, >>> >>> I'm tring to use ISGetTotalIndices in a Fortran program but I've got >>> an undefined reference error message when I compile it :"undefined >>> reference to `isgettotalindices_'". >>> I've also tried to replace IsGetIndices by ISGetTotalIndices and also >>> ISGetNonlocalIndices in this example >>> http://www.mcs.anl.gov/petsc/petsc-current/src/vec/is/is/examples/tutorials/ex1f.F.html >>> but the same error occurs. >>> The "nm /lib/libpetsc.so |grep ISGetTotal" command returns >>> "000000000031a7ab T ISGetTotalIndices" so that the symbol is there >>> and nothing seems to be missing. >>> >>> Are those routines available in Fortran? >>> >>> Thank you. >>> Constantin. >>> >>> From faraz_hussain at yahoo.com Thu Jun 30 09:20:27 2016 From: faraz_hussain at yahoo.com (Faraz Hussain) Date: Thu, 30 Jun 2016 14:20:27 +0000 (UTC) Subject: [petsc-users] Are performance benchmarks available? In-Reply-To: <213496802.3843456.1467229612250.JavaMail.yahoo@mail.yahoo.com> References: <1337334190.2752078.1467075579364.JavaMail.yahoo.ref@mail.yahoo.com> <1337334190.2752078.1467075579364.JavaMail.yahoo@mail.yahoo.com> <781294040.3740649.1467216467855.JavaMail.yahoo@mail.yahoo.com> <213496802.3843456.1467229612250.JavaMail.yahoo@mail.yahoo.com> Message-ID: <1780114846.4471656.1467296427576.JavaMail.yahoo@mail.yahoo.com> I am wondering if there are benchmarks available that I can solve on my cluster to compare performance? I want to compare how scaling up-to 240 cores compares to large models already solved on an optimized? configuration and hardware. -------------- next part -------------- An HTML attachment was scrubbed... URL: From hariseldon99 at gmail.com Thu Jun 30 11:30:29 2016 From: hariseldon99 at gmail.com (Analabha Roy) Date: Thu, 30 Jun 2016 18:30:29 +0200 Subject: [petsc-users] Binary input-output for parallel dense matrices (petsc4py) Message-ID: Hi all, I'm trying to do basic binary input/output for parallel matrices. Following the example in "petsc4py/demo/binary-io/matvecio.py ", the code below seems to work fine (raw python file attached) with "mpirun -np 2 python ./test_binwrite.py" until I uncomment "#A.setType(PETSc.Mat.Type.DENSE)" in order to do it for parallel dense matrices. Then it crashes with error (stderr file attached, see below for highlighted message). What am I doing wrong? Python Code ======================================================================================== #!/usr/bin/env python """Created on Wed Jun 29 22:05:59 2016 at author: daneel at utexas.edu""" import numpy as npfrom petsc4py import PETScPrint = PETSc.Sys.Print matsize = 100 filename = 'tmpMatrix-A.dat' A = PETSc.Mat().create(PETSc.COMM_WORLD) A.setSizes([matsize, matsize])#A.setType(PETSc.Mat.Type.DENSE) A.setUp() Istart, Iend = A.getOwnershipRange()for I in xrange(Istart, Iend) : A[I,:] = np.random.random(matsize) A.assemble()Print("Random matrix assembled. Now writing to temporary file ...")# save viewer = PETSc.Viewer().createBinary(filename, 'w') viewer.pushFormat(viewer.Format.NATIVE) viewer.view(A)Print("Written to ", filename)# reloadPrint("Now reloading from ", filename) viewer_new = PETSc.Viewer().createBinary(filename, 'r') viewer_new.pushFormat(viewer.getFormat()) A_new = PETSc.Mat().load(viewer_new)assert A_new.equal(A), "Reload unsuccessful"Print("Reload successful") ======================================================================================== stderr output for parallel dense matrices: ======================================================================================== Random matrix assembled. Now writing to temporary file ... Written to tmpMatrix-A.dat Now reloading from tmpMatrix-A.dat Traceback (most recent call last): File "./test_binwrite.py", line 36, in Traceback (most recent call last): A_new = PETSc.Mat().load(viewer_new) File "./test_binwrite.py", line 36, in File "PETSc/Mat.pyx", line 642, in petsc4py.PETSc.Mat.load (src/petsc4py.PETSc.c:118243) A_new = PETSc.Mat().load(viewer_new) File "PETSc/Mat.pyx", line 642, in petsc4py.PETSc.Mat.load (src/petsc4py.PETSc.c:118243) petsc4py.PETSc.Errorpetsc4py.PETSc.Error: : error code 55[0] MatLoad() line 1013 in /home/daneel/.local/src/petsc-3.7.2/src/mat/interface/matrix.c[0] MatLoad_MPIAIJ() line 2947 in /home/daneel/.local/src/petsc-3.7.2/src/mat/impls/aij/mpi/mpiaij.c[0] MatLoad_MPIAIJ() line 2947 in /home/daneel/.local/src/petsc-3.7.2/src/mat/impls/aij/mpi/mpiaij.c[0] Out of memory. Allocated: 0, Used by process: 23687168[0] Memory requested 5942180016 error code 55[1] MatLoad() line 1013 in /home/daneel/.local/src/petsc-3.7.2/src/mat/interface/matrix.c[1] MatLoad_MPIAIJ() line 2967 in /home/daneel/.local/src/petsc-3.7.2/src/mat/impls/aij/mpi/mpiaij.c[1] MatLoad_MPIAIJ() line 2967 in /home/daneel/.local/src/petsc-3.7.2/src/mat/impls/aij/mpi/mpiaij.c[1] Out of memory. Allocated: 0, Used by process: 23506944[1] Memory requested 18446744072415633408 -------------------------------------------------------------------------- mpirun noticed that the job aborted, but has no info as to the process that caused that situation. -------------------------------------------------------------------------- ======================================================================================== -- --- Analabha Roy Postdoctoral Fellow National Institute of Theoretical Physics (NiTheP) Private Bag X1, Matieland, Stellenbosch, South Africa,7602 Emails: daneel at utexas.edu, daneel at sun.ac.za, hariseldon99 at gmail.com Webpage: http://www.ph.utexas.edu/~daneel/ -------------- next part -------------- An HTML attachment was scrubbed... URL: -------------- next part -------------- daneel at fis406826:~/gitrepos/ising_exact$ mpirun -np 2 ./test_binwrite.py Random matrix assembled. Now writing to temporary file ... Written to tmpMatrix-A.dat Now reloading from tmpMatrix-A.dat Traceback (most recent call last): File "./test_binwrite.py", line 36, in Traceback (most recent call last): A_new = PETSc.Mat().load(viewer_new) File "./test_binwrite.py", line 36, in File "PETSc/Mat.pyx", line 642, in petsc4py.PETSc.Mat.load (src/petsc4py.PETSc.c:118243) A_new = PETSc.Mat().load(viewer_new) File "PETSc/Mat.pyx", line 642, in petsc4py.PETSc.Mat.load (src/petsc4py.PETSc.c:118243) petsc4py.PETSc.Errorpetsc4py.PETSc.Error: : error code 55 [0] MatLoad() line 1013 in /home/daneel/.local/src/petsc-3.7.2/src/mat/interface/matrix.c [0] MatLoad_MPIAIJ() line 2947 in /home/daneel/.local/src/petsc-3.7.2/src/mat/impls/aij/mpi/mpiaij.c [0] MatLoad_MPIAIJ() line 2947 in /home/daneel/.local/src/petsc-3.7.2/src/mat/impls/aij/mpi/mpiaij.c [0] Out of memory. Allocated: 0, Used by process: 23687168 [0] Memory requested 5942180016 error code 55 [1] MatLoad() line 1013 in /home/daneel/.local/src/petsc-3.7.2/src/mat/interface/matrix.c [1] MatLoad_MPIAIJ() line 2967 in /home/daneel/.local/src/petsc-3.7.2/src/mat/impls/aij/mpi/mpiaij.c [1] MatLoad_MPIAIJ() line 2967 in /home/daneel/.local/src/petsc-3.7.2/src/mat/impls/aij/mpi/mpiaij.c [1] Out of memory. Allocated: 0, Used by process: 23506944 [1] Memory requested 18446744072415633408 -------------------------------------------------------------------------- mpirun noticed that the job aborted, but has no info as to the process that caused that situation. -------------------------------------------------------------------------- -------------- next part -------------- A non-text attachment was scrubbed... Name: test_binwrite.py Type: text/x-python Size: 920 bytes Desc: not available URL: From bsmith at mcs.anl.gov Thu Jun 30 12:12:51 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Thu, 30 Jun 2016 12:12:51 -0500 Subject: [petsc-users] Binary input-output for parallel dense matrices (petsc4py) In-Reply-To: References: Message-ID: <875A0F06-4155-4D5E-8C6C-DC0E086736A2@mcs.anl.gov> Ahh. When you use the "native" format with dense matrices you can only read the matrix back in later with a dense matrix. You need to set the A_new matrix type to dense before calling the load. We need more error checking in the PETSc MatLoad() for non-dense matrix formats that properly stops the code with an error message that the file format is not handled by the matrix type. I will do this. Barry > On Jun 30, 2016, at 11:30 AM, Analabha Roy wrote: > > Hi all, > > I'm trying to do basic binary input/output for parallel matrices. Following the example in "petsc4py/demo/binary-io/matvecio.py ", the code below seems to work fine (raw python file attached) with "mpirun -np 2 python ./test_binwrite.py" until I uncomment "#A.setType(PETSc.Mat.Type.DENSE)" in order to do it for parallel dense matrices. Then it crashes with error (stderr file attached, see below for highlighted message). What am I doing wrong? > > Python Code > ======================================================================================== > > #!/usr/bin/env python > """ > Created on Wed Jun 29 22:05:59 2016 > > @author: daneel at utexas.edu > """ > > > > import numpy as > np > > from petsc4py import > PETSc > > Print = PETSc.Sys.Print > > > matsize > = 100 > > filename > = 'tmpMatrix-A.dat' > > > A > = PETSc.Mat().create(PETSc.COMM_WORLD) > > A > .setSizes([matsize, matsize]) > #A.setType(PETSc.Mat.Type.DENSE) > > A > .setUp() > > > Istart > , Iend = A.getOwnershipRange() > for I in xrange(Istart, Iend) : > > A > [I,:] = np.random.random(matsize) > > > A > .assemble() > Print("Random matrix assembled. Now writing to temporary file ...") > # save > > viewer > = PETSc.Viewer().createBinary(filename, 'w') > > viewer > .pushFormat(viewer.Format.NATIVE) > > viewer > .view(A) > Print("Written to ", filename) > # reload > Print("Now reloading from ", filename) > > viewer_new > = PETSc.Viewer().createBinary(filename, 'r') > > viewer_new > .pushFormat(viewer.getFormat()) > > A_new > = PETSc.Mat().load(viewer_new) > assert A_new.equal(A), "Reload unsuccessful" > Print("Reload successful") > ======================================================================================== > > > > stderr output for parallel dense matrices: > ======================================================================================== > Random matrix assembled. Now writing to temporary file ... > > Written to tmpMatrix-A > . > dat > Now reloading from tmpMatrix-A > . > dat > Traceback > (most recent call last): > > File > "./test_binwrite.py", line 36, in > > Traceback > (most recent call last): > > A_new > = PETSc.Mat().load(viewer_new) > > File > "./test_binwrite.py", line 36, in > > File > "PETSc/Mat.pyx", line 642, in petsc4py.PETSc.Mat.load (src/petsc4py.PETSc.c:118243) > > A_new > = PETSc.Mat().load(viewer_new) > > File > "PETSc/Mat.pyx", line 642, in petsc4py.PETSc.Mat.load (src/petsc4py.PETSc.c:118243) > > petsc4py > .PETSc.Errorpetsc4py.PETSc.Error: : error code 55 > [0] MatLoad() line 1013 in /home/daneel/.local/src/petsc-3.7.2/src/mat/interface/matrix.c > [0] MatLoad_MPIAIJ() line 2947 in /home/daneel/.local/src/petsc-3.7.2/src/mat/impls/aij/mpi/mpiaij.c > [0] MatLoad_MPIAIJ() line 2947 in /home/daneel/.local/src/petsc-3.7.2/src/mat/impls/aij/mpi/mpiaij.c > [0] Out of memory. Allocated: 0, Used by process: 23687168 > [0] Memory requested 5942180016 > > error code > 55 > [1] MatLoad() line 1013 in /home/daneel/.local/src/petsc-3.7.2/src/mat/interface/matrix.c > [1] MatLoad_MPIAIJ() line 2967 in /home/daneel/.local/src/petsc-3.7.2/src/mat/impls/aij/mpi/mpiaij.c > [1] MatLoad_MPIAIJ() line 2967 in /home/daneel/.local/src/petsc-3.7.2/src/mat/impls/aij/mpi/mpiaij.c > [1] Out of memory. Allocated: 0, Used by process: 23506944 > [1] Memory requested 18446744072415633408 > > -------------------------------------------------------------------------- > mpirun noticed that the job aborted, but has no info as to the process > that caused that situation > . > > -------------------------------------------------------------------------- > > ======================================================================================== > > > > > > > > -- > --- > Analabha Roy > Postdoctoral Fellow > National Institute of Theoretical Physics (NiTheP) > Private Bag X1, Matieland, > Stellenbosch, South Africa,7602 > Emails: daneel at utexas.edu, daneel at sun.ac.za, hariseldon99 at gmail.com > Webpage: http://www.ph.utexas.edu/~daneel/ > From bsmith at mcs.anl.gov Thu Jun 30 12:20:44 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Thu, 30 Jun 2016 12:20:44 -0500 Subject: [petsc-users] ISGetTotalIndices with Fortran In-Reply-To: References: Message-ID: <6253A5CE-43CE-49E4-8BFC-1F6071B23062@mcs.anl.gov> > On Jun 30, 2016, at 8:43 AM, Constantin Nguyen Van wrote: > > Hi again, > > I've noticed that the same error occurs with the subroutine MatGetRedundantMatrix. > Is that possible to add the Fortran interface too? This one (it is MatCreateRedundantMatrix) actually can be created automatically but for some reason was turned off for automatic creation. I have fixed this in the maint branch. If you do a git pull on the maint branch (or master) and then make allfortranstubs it will generate the missing function for you. Thanks for letting us know Barry > > Thank you. > Constantin. > > Le 2016-06-28 16:51, Constantin Nguyen Van a ?crit : >> Alright! >> Thank you. >> Constantin. >> Le 2016-06-28 04:54, Barry Smith a ?crit : >>> I have added these fortran interfaces in the branch >>> barry/add-missing-apis/maint and merged into the next branch for >>> testing. When it passes the tests I will merge it into maint and it >>> will then be available in the next patch release. >>> Barry >>>> On Jun 27, 2016, at 7:50 AM, Constantin Nguyen Van wrote: >>>> Hi, >>>> I'm tring to use ISGetTotalIndices in a Fortran program but I've got an undefined reference error message when I compile it :"undefined reference to `isgettotalindices_'". >>>> I've also tried to replace IsGetIndices by ISGetTotalIndices and also ISGetNonlocalIndices in this example http://www.mcs.anl.gov/petsc/petsc-current/src/vec/is/is/examples/tutorials/ex1f.F.html but the same error occurs. >>>> The "nm /lib/libpetsc.so |grep ISGetTotal" command returns "000000000031a7ab T ISGetTotalIndices" so that the symbol is there and nothing seems to be missing. >>>> Are those routines available in Fortran? >>>> Thank you. >>>> Constantin. From epscodes at gmail.com Thu Jun 30 12:50:06 2016 From: epscodes at gmail.com (Xiangdong) Date: Thu, 30 Jun 2016 13:50:06 -0400 Subject: [petsc-users] totalview cannot recognize the type Vec_Seq Message-ID: Hello everyone, I am trying to use totalview to debug my codes. For the same binary, in gdb, (gdb) p ((Vec_Seq*) v->data)->array[0] works fine. However, when I tried to view the value of v in totalview, it cannot recognize the data type Vec_Seq. Does anyone have similar experience? Any clue to fix this? Thanks. Xiangdong -------------- next part -------------- An HTML attachment was scrubbed... URL: From epscodes at gmail.com Thu Jun 30 13:04:55 2016 From: epscodes at gmail.com (Xiangdong) Date: Thu, 30 Jun 2016 14:04:55 -0400 Subject: [petsc-users] totalview cannot recognize the type Vec_Seq In-Reply-To: References: Message-ID: Sorry for the spam. I retyped the same command in front of my coworker, and it just works. Xiangdong On Thu, Jun 30, 2016 at 1:50 PM, Xiangdong wrote: > Hello everyone, > > I am trying to use totalview to debug my codes. For the same binary, in > gdb, (gdb) p ((Vec_Seq*) v->data)->array[0] works fine. However, when I > tried to view the value of v in totalview, it cannot recognize the data > type Vec_Seq. Does anyone have similar experience? Any clue to fix this? > > Thanks. > > Xiangdong > -------------- next part -------------- An HTML attachment was scrubbed... URL: From mhassan at miners.utep.edu Thu Jun 30 14:00:48 2016 From: mhassan at miners.utep.edu (Hassan Md Mahmudulla) Date: Thu, 30 Jun 2016 19:00:48 +0000 Subject: [petsc-users] Solving generalized eigenvalue problem effeciently Message-ID: Hi, I have been trying to solve Generalized eigenvalue problem where the matrix is symmetric and of size around 10,000-20,000. I have been using default solver in PETSc. But compared to ScaLAPACK, I am having really bad performance in terms of execution time even though I am requesting only 10% eigenvalues of the spectrum. I am a new user of PETSc. So, I really don't have a clear idea on how to use it efficiently. I will appreciate if anybody can please give me an idea to use PETSc effectively so that I can get a much better performance than ScaLAPACK. Thanks M Hassan -------------- next part -------------- An HTML attachment was scrubbed... URL: From bsmith at mcs.anl.gov Thu Jun 30 14:17:13 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Thu, 30 Jun 2016 14:17:13 -0500 Subject: [petsc-users] Solving generalized eigenvalue problem effeciently In-Reply-To: References: Message-ID: <2998E604-BF9F-4FC3-902C-388D7CFB9C9C@mcs.anl.gov> > On Jun 30, 2016, at 2:00 PM, Hassan Md Mahmudulla wrote: > > Hi, > I have been trying to solve Generalized eigenvalue problem where the matrix is symmetric and of size around 10,000-20,000. I have been using default solver in PETSc. Not enough information. Presumably you are using SLEPc? You should send email to the SLEPc mailing list for example slepc-maint at upv.es with details of how you using the solver, data from -log_summary, is the matrix sparse etc. > But compared to ScaLAPACK, I am having really bad performance in terms of execution time even though I am requesting only 10% eigenvalues of the spectrum. I am a new user of PETSc. So, I really don't have a clear idea on how to use it efficiently. I will appreciate if anybody can please give me an idea to use PETSc effectively so that I can get a much better performance than ScaLAPACK. > > Thanks > > M Hassan From Hassan.Raiesi at AERO.BOMBARDIER.COM Thu Jun 30 14:40:41 2016 From: Hassan.Raiesi at AERO.BOMBARDIER.COM (Hassan Raiesi) Date: Thu, 30 Jun 2016 19:40:41 +0000 Subject: [petsc-users] reusing matrix created with MatCreateMPIAIJWithSplitArrays Message-ID: Hello, We are using PETSC in our CFD code, and noticed that using "MatCreateMPIAIJWithSplitArrays" is almost 60% faster for large problem size (i.e DOF > 725M, using GAMG each time-step only takes 5sec, compared to 8.3 sec when assembling the matrix one row at a time using matsetvaluesblocked() as recommended). The problem is that the memory usage goes up after each call to MatCreateMPIAIJWithSplitArrays to update the matrix values. As MatCreateMPIAIJWithSplitArrays is not supposed to copy the values, do we need to call it each time to update the values? We tried to just update the values of the diagonal and off-diagonal part of the arrays passed to "MatCreateMPIAIJWithSplitArrays", (the sparsity structure is fixed) but it looks like that the values are not updated, what is the proper way to update the values of the matrix created by MatCreateMPIAIJWithSplitArrays? Thank you Hassan Raiesi, Advanced Aerodynamics Department Bombardier Aerospace hassan.raiesi at aero.bombardier.com 2351 boul. Alfred-Nobel (BAN1) Ville Saint-Laurent, Qu?bec, H4S 2A9 T?l. 514-855-5001 # 62204 [cid:image001.png at 01D1D2C3.1D169550] CONFIDENTIALITY NOTICE - This communication may contain privileged or confidential information. If you are not the intended recipient or received this communication by error, please notify the sender and delete the message without copying, forwarding and/or disclosing it. -------------- next part -------------- An HTML attachment was scrubbed... URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: image001.png Type: image/png Size: 6402 bytes Desc: image001.png URL: From dave.mayhem23 at gmail.com Thu Jun 30 15:12:38 2016 From: dave.mayhem23 at gmail.com (Dave May) Date: Thu, 30 Jun 2016 22:12:38 +0200 Subject: [petsc-users] reusing matrix created with MatCreateMPIAIJWithSplitArrays In-Reply-To: References: Message-ID: On Thursday, 30 June 2016, Hassan Raiesi wrote: > Hello, > > > > We are using PETSC in our CFD code, and noticed that using > ?MatCreateMPIAIJWithSplitArrays? is almost 60% faster for large problem > size (i.e DOF > 725M, using GAMG each time-step only takes 5sec, compared > to 8.3 sec when assembling the matrix one row at a time using > matsetvaluesblocked() as recommended). > > > > The problem is that the memory usage goes up after each call to > MatCreateMPIAIJWithSplitArrays to update the matrix values. > Did you call MatDestroy() at each time step? > As MatCreateMPIAIJWithSplitArrays is not supposed to copy the values, do > we need to call it each time to update the values? We tried to just update > the values of the diagonal and off-diagonal part of the arrays passed to > ?MatCreateMPIAIJWithSplitArrays?, (the sparsity structure is fixed) but it > looks like that the values are not updated, what is the proper way to > update the values of the matrix created by MatCreateMPIAIJWithSplitArrays? > The fool proof way would be to simply call MatCreateMPIAIJWithSplitArrays() and MatDestroy() at each time step (or whenever values are changed). Since no data is actually copied, the overhead of creating the mpiaij matrix will be minimal Thanks, Dave > > > > > Thank you > > > > *Hassan Raiesi, * > > Advanced Aerodynamics Department > > Bombardier Aerospace > > > > hassan.raiesi at aero.bombardier.com > > > > > *2351 boul. Alfred-Nobel (BAN1)* > > *Ville Saint-Laurent, Qu?bec, H4S 2A9* > > > > > > > > T?l. > > 514-855-5001 # 62204 > > > > > > > > > > > > *CONFIDENTIALITY NOTICE* - This communication may contain privileged or > confidential information. > If you are not the intended recipient or received this communication by > error, please notify the sender > and delete the message without copying, forwarding and/or disclosing it. > > > > > > > -------------- next part -------------- An HTML attachment was scrubbed... URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: image001.png Type: image/png Size: 6402 bytes Desc: not available URL: From ghoffma at sandia.gov Thu Jun 30 16:17:46 2016 From: ghoffma at sandia.gov (Hoffman, Galen) Date: Thu, 30 Jun 2016 21:17:46 +0000 Subject: [petsc-users] installing PETSc with mkl_pardiso solver Message-ID: Greetings, I have been trying to install PETSc v3.7.2 with the MKL Pardiso add-on. I have been using the instructions at the bottom of the webpage at https://www.mcs.anl.gov/petsc/documentation/changes/35.html, which require setting the following options for the PETSc configuration: --blas-lapack-dir=LOCATION_OF_INTEL_MKL --with-mkl_pardiso-dir=LOCATION_OF_INTEL_MKL I have installed the current Intel MKL at the default location in /opt/intel/. This is version 11.3.3.210. My question is to what should I set the location? The obvious choices don't work, with the configuration failing when it checks the BLAS library: /opt/intel/mkl/lib/intel64_lin /opt/intel/mkl/lib /opt/intel/mkl /opt/intel/compilers_and_libraries_2016.3.210/linux/mkl/lib/intel64_lin /opt/intel/compilers_and_libraries_2016.3.210/linux/mkl It will also fail if I set --download-f2cblaslapack=1 when it checks the MKL Pardiso directory. The error message says the following: *************** UNABLE to CONFIGURE with GIVEN OPTIONS (see configure.log for details): ------------------------------------------------------------------------------- Could not find a functional BLAS. Run with --with-blas-lib= to indicate the library containing BLAS. Or --download-f2cblaslapack=1 to have one automatically downloaded and installed ************** ************** UNABLE to CONFIGURE with GIVEN OPTIONS (see configure.log for details): ------------------------------------------------------------------------------- MKL_Paradiso requires Intel MKL. Please rerun configure using --with-blas-lapack-dir=LOCATION_OF_INTEL_MKL ************* For which specific files is configure searching? Also, is it known whether my installed version of MKL is compatible? Regards, --Galen -------------- next part -------------- An HTML attachment was scrubbed... URL: From balay at mcs.anl.gov Thu Jun 30 16:36:32 2016 From: balay at mcs.anl.gov (Satish Balay) Date: Thu, 30 Jun 2016 16:36:32 -0500 Subject: [petsc-users] installing PETSc with mkl_pardiso solver In-Reply-To: References: Message-ID: Our current build works with: Configure Options: --configModules=PETSc.Configure --optionsModule=config.compilerOptions CC=icc CXX=icpc FC=ifort --with-blas-lapack-dir=/soft/com/packages/intel/15/update3/mkl --with-mkl_pardiso-dir=/soft/com/packages/intel/15/update3/mkl --download-mpich=1 --with-no-output -PETSC_ARCH=arch-pardiso -PETSC_DIR=/sandbox/petsc/petsc.clone-2 http://ftp.mcs.anl.gov/pub/petsc/nightlylogs/archive/2016/06/26/configure_maint_arch-pardiso_cg.log Note: You should also see '/opt/intel/compilers_and_libraries_2016.3.210/linux/mkl/lib/intel64' in you intel install. balay at es^/soft/com/packages/intel/16/u3/mkl/lib $ ls -l total 5 lrwxrwxrwx 1 fritz collab 13 Jun 6 11:00 intel64 -> ./intel64_lin/ drwxr-xr-x 3 fritz collab 62 Jun 6 11:02 intel64_lin/ drwxr-xr-x 3 fritz collab 30 Jun 6 11:03 intel64_lin_mic/ lrwxrwxrwx 1 fritz collab 17 Jun 6 11:02 mic -> ./intel64_lin_mic/ balay at es^/soft/com/packages/intel/16/u3/mkl/lib $ The following should also work: --with-blas-lapack-dir=/opt/intel/compilers_and_libraries_2016.3.210/linux/mkl/lib/intel64_lin --with-mkl_pardiso-dir=/opt/intel/compilers_and_libraries_2016.3.210/linux/mkl/lib/intel64_lin If configure continues to fail - send us the corresponding configure.log Satish On Thu, 30 Jun 2016, Hoffman, Galen wrote: > Greetings, > > I have been trying to install PETSc v3.7.2 with the MKL Pardiso add-on. I have been using the instructions at the bottom of the webpage at https://www.mcs.anl.gov/petsc/documentation/changes/35.html, which require setting the following options for the PETSc configuration: > > --blas-lapack-dir=LOCATION_OF_INTEL_MKL > --with-mkl_pardiso-dir=LOCATION_OF_INTEL_MKL > > I have installed the current Intel MKL at the default location in /opt/intel/. This is version 11.3.3.210. > > My question is to what should I set the location? The obvious choices don't work, with the configuration failing when it checks the BLAS library: > > > /opt/intel/mkl/lib/intel64_lin > /opt/intel/mkl/lib > /opt/intel/mkl > /opt/intel/compilers_and_libraries_2016.3.210/linux/mkl/lib/intel64_lin > /opt/intel/compilers_and_libraries_2016.3.210/linux/mkl > > It will also fail if I set --download-f2cblaslapack=1 when it checks the MKL Pardiso directory. > > The error message says the following: > > *************** > UNABLE to CONFIGURE with GIVEN OPTIONS (see configure.log for details): > ------------------------------------------------------------------------------- > Could not find a functional BLAS. Run with --with-blas-lib= to indicate the library containing BLAS. > Or --download-f2cblaslapack=1 to have one automatically downloaded and installed > ************** > > > ************** > UNABLE to CONFIGURE with GIVEN OPTIONS (see configure.log for details): > ------------------------------------------------------------------------------- > MKL_Paradiso requires Intel MKL. Please rerun configure using --with-blas-lapack-dir=LOCATION_OF_INTEL_MKL > ************* > > For which specific files is configure searching? Also, is it known whether my installed version of MKL is compatible? > > Regards, > > --Galen > > > > > From bsmith at mcs.anl.gov Thu Jun 30 17:17:08 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Thu, 30 Jun 2016 17:17:08 -0500 Subject: [petsc-users] reusing matrix created with MatCreateMPIAIJWithSplitArrays In-Reply-To: References: Message-ID: <333B1A41-ACE3-49E4-ADB3-8317D177ED14@mcs.anl.gov> > On Jun 30, 2016, at 2:40 PM, Hassan Raiesi wrote: > > Hello, > > We are using PETSC in our CFD code, and noticed that using ?MatCreateMPIAIJWithSplitArrays? is almost 60% faster for large problem size (i.e DOF > 725M, using GAMG each time-step only takes 5sec, compared to 8.3 sec when assembling the matrix one row at a time using matsetvaluesblocked() as recommended). > > The problem is that the memory usage goes up after each call to MatCreateMPIAIJWithSplitArrays to update the matrix values. As MatCreateMPIAIJWithSplitArrays is not supposed to copy the values, do we need to call it each time to update the values? We tried to just update the values of the diagonal and off-diagonal part of the arrays passed to ?MatCreateMPIAIJWithSplitArrays?, (the sparsity structure is fixed) but it looks like that the values are not updated, what is the proper way to update the values of the matrix created by MatCreateMPIAIJWithSplitArrays? Since you have direct access to the two numeric arrays passed to MatCreateMPIAIJWithSplitArrays() you can simply change the values in those locations AND THEN immediately CALL MatAssemblyBegin/MatAssemblyEnd() on the matrix; this will increase the the PETSc object state value for the matrix so the matrix routines (and preconditioner) will know you changed the matrix values. If you don't call the MatAssemblyBegin/MatAssemblyEnd() the preconditioner will think the matrix has not been changed so just use its old values as you observed. Barry Of course if you change any nonzero locations in the matrix you need to destroy the matrix and call MatCreateMPIAIJWithSplitArrays() again. > > > Thank you > > Hassan Raiesi, > Advanced Aerodynamics Department > Bombardier Aerospace > > hassan.raiesi at aero.bombardier.com > > 2351 boul. Alfred-Nobel (BAN1) > Ville Saint-Laurent, Qu?bec, H4S 2A9 > > > > T?l. > 514-855-5001 # 62204 > > > > > > > CONFIDENTIALITY NOTICE - This communication may contain privileged or confidential information. > If you are not the intended recipient or received this communication by error, please notify the sender > and delete the message without copying, forwarding and/or disclosing it. From hariseldon99 at gmail.com Thu Jun 30 17:22:57 2016 From: hariseldon99 at gmail.com (Analabha Roy) Date: Fri, 1 Jul 2016 00:22:57 +0200 Subject: [petsc-users] Binary input-output for parallel dense matrices (petsc4py) In-Reply-To: <875A0F06-4155-4D5E-8C6C-DC0E086736A2@mcs.anl.gov> References: <875A0F06-4155-4D5E-8C6C-DC0E086736A2@mcs.anl.gov> Message-ID: Hi, Thanks for your attention. I created A_new explicitly and set the type to dense, and it ran as expected. I also did A_new = A.duplicate() A_new.load(viewer_new) and it worked too! Regards, AR On Thu, Jun 30, 2016 at 7:12 PM, Barry Smith wrote: > > Ahh. When you use the "native" format with dense matrices you can only > read the matrix back in later with a dense matrix. You need to set the > A_new matrix type to dense before calling the load. > > We need more error checking in the PETSc MatLoad() for non-dense matrix > formats that properly stops the code with an error message that the file > format is not handled by the matrix type. I will do this. > > Barry > > > > > On Jun 30, 2016, at 11:30 AM, Analabha Roy > wrote: > > > > Hi all, > > > > I'm trying to do basic binary input/output for parallel matrices. > Following the example in "petsc4py/demo/binary-io/matvecio.py ", the code > below seems to work fine (raw python file attached) with "mpirun -np 2 > python ./test_binwrite.py" until I uncomment > "#A.setType(PETSc.Mat.Type.DENSE)" in order to do it for parallel dense > matrices. Then it crashes with error (stderr file attached, see below for > highlighted message). What am I doing wrong? > > > > Python Code > > > ======================================================================================== > > > > #!/usr/bin/env python > > """ > > Created on Wed Jun 29 22:05:59 2016 > > > > @author: daneel at utexas.edu > > """ > > > > > > > > import numpy as > > np > > > > from petsc4py import > > PETSc > > > > Print = PETSc.Sys.Print > > > > > > matsize > > = 100 > > > > filename > > = 'tmpMatrix-A.dat' > > > > > > A > > = PETSc.Mat().create(PETSc.COMM_WORLD) > > > > A > > .setSizes([matsize, matsize]) > > #A.setType(PETSc.Mat.Type.DENSE) > > > > A > > .setUp() > > > > > > Istart > > , Iend = A.getOwnershipRange() > > for I in xrange(Istart, Iend) : > > > > A > > [I,:] = np.random.random(matsize) > > > > > > A > > .assemble() > > Print("Random matrix assembled. Now writing to temporary file ...") > > # save > > > > viewer > > = PETSc.Viewer().createBinary(filename, 'w') > > > > viewer > > .pushFormat(viewer.Format.NATIVE) > > > > viewer > > .view(A) > > Print("Written to ", filename) > > # reload > > Print("Now reloading from ", filename) > > > > viewer_new > > = PETSc.Viewer().createBinary(filename, 'r') > > > > viewer_new > > .pushFormat(viewer.getFormat()) > > > > A_new > > = PETSc.Mat().load(viewer_new) > > assert A_new.equal(A), "Reload unsuccessful" > > Print("Reload successful") > > > ======================================================================================== > > > > > > > > stderr output for parallel dense matrices: > > > ======================================================================================== > > Random matrix assembled. Now writing to temporary file ... > > > > Written to tmpMatrix-A > > . > > dat > > Now reloading from tmpMatrix-A > > . > > dat > > Traceback > > (most recent call last): > > > > File > > "./test_binwrite.py", line 36, in > > > > Traceback > > (most recent call last): > > > > A_new > > = PETSc.Mat().load(viewer_new) > > > > File > > "./test_binwrite.py", line 36, in > > > > File > > "PETSc/Mat.pyx", line 642, in petsc4py.PETSc.Mat.load > (src/petsc4py.PETSc.c:118243) > > > > A_new > > = PETSc.Mat().load(viewer_new) > > > > File > > "PETSc/Mat.pyx", line 642, in petsc4py.PETSc.Mat.load > (src/petsc4py.PETSc.c:118243) > > > > petsc4py > > .PETSc.Errorpetsc4py.PETSc.Error: : error code 55 > > [0] MatLoad() line 1013 in > /home/daneel/.local/src/petsc-3.7.2/src/mat/interface/matrix.c > > [0] MatLoad_MPIAIJ() line 2947 in > /home/daneel/.local/src/petsc-3.7.2/src/mat/impls/aij/mpi/mpiaij.c > > [0] MatLoad_MPIAIJ() line 2947 in > /home/daneel/.local/src/petsc-3.7.2/src/mat/impls/aij/mpi/mpiaij.c > > [0] Out of memory. Allocated: 0, Used by process: 23687168 > > [0] Memory requested 5942180016 > > > > error code > > 55 > > [1] MatLoad() line 1013 in > /home/daneel/.local/src/petsc-3.7.2/src/mat/interface/matrix.c > > [1] MatLoad_MPIAIJ() line 2967 in > /home/daneel/.local/src/petsc-3.7.2/src/mat/impls/aij/mpi/mpiaij.c > > [1] MatLoad_MPIAIJ() line 2967 in > /home/daneel/.local/src/petsc-3.7.2/src/mat/impls/aij/mpi/mpiaij.c > > [1] Out of memory. Allocated: 0, Used by process: 23506944 > > [1] Memory requested 18446744072415633408 > > > > > -------------------------------------------------------------------------- > > mpirun noticed that the job aborted, but has no info as to the process > > that caused that situation > > . > > > > > -------------------------------------------------------------------------- > > > > > ======================================================================================== > > > > > > > > > > > > > > > > -- > > --- > > Analabha Roy > > Postdoctoral Fellow > > National Institute of Theoretical Physics (NiTheP) > > Private Bag X1, Matieland, > > Stellenbosch, South Africa,7602 > > Emails: daneel at utexas.edu, daneel at sun.ac.za, hariseldon99 at gmail.com > > Webpage: http://www.ph.utexas.edu/~daneel/ > > > > -- --- Analabha Roy Postdoctoral Fellow National Institute of Theoretical Physics (NiTheP) Private Bag X1, Matieland, Stellenbosch, South Africa,7602 Emails: daneel at utexas.edu, daneel at sun.ac.za, hariseldon99 at gmail.com Webpage: http://www.ph.utexas.edu/~daneel/ -------------- next part -------------- An HTML attachment was scrubbed... URL: From bsmith at mcs.anl.gov Thu Jun 30 17:29:30 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Thu, 30 Jun 2016 17:29:30 -0500 Subject: [petsc-users] Binary input-output for parallel dense matrices (petsc4py) In-Reply-To: References: <875A0F06-4155-4D5E-8C6C-DC0E086736A2@mcs.anl.gov> Message-ID: Great, I have added error checking for the matrix types that didn't have it so the problem will be clearer for users in the future. Thanks for reporting the problem, Barry > On Jun 30, 2016, at 5:22 PM, Analabha Roy wrote: > > Hi, > > Thanks for your attention. I created A_new explicitly and set the type to dense, and it ran as expected. I also did > > A_new = A.duplicate() > A_new.load(viewer_new) > > and it worked too! > > Regards, > AR > > > > > On Thu, Jun 30, 2016 at 7:12 PM, Barry Smith wrote: > > Ahh. When you use the "native" format with dense matrices you can only read the matrix back in later with a dense matrix. You need to set the A_new matrix type to dense before calling the load. > > We need more error checking in the PETSc MatLoad() for non-dense matrix formats that properly stops the code with an error message that the file format is not handled by the matrix type. I will do this. > > Barry > > > > > On Jun 30, 2016, at 11:30 AM, Analabha Roy wrote: > > > > Hi all, > > > > I'm trying to do basic binary input/output for parallel matrices. Following the example in "petsc4py/demo/binary-io/matvecio.py ", the code below seems to work fine (raw python file attached) with "mpirun -np 2 python ./test_binwrite.py" until I uncomment "#A.setType(PETSc.Mat.Type.DENSE)" in order to do it for parallel dense matrices. Then it crashes with error (stderr file attached, see below for highlighted message). What am I doing wrong? > > > > Python Code > > ======================================================================================== > > > > #!/usr/bin/env python > > """ > > Created on Wed Jun 29 22:05:59 2016 > > > > @author: daneel at utexas.edu > > """ > > > > > > > > import numpy as > > np > > > > from petsc4py import > > PETSc > > > > Print = PETSc.Sys.Print > > > > > > matsize > > = 100 > > > > filename > > = 'tmpMatrix-A.dat' > > > > > > A > > = PETSc.Mat().create(PETSc.COMM_WORLD) > > > > A > > .setSizes([matsize, matsize]) > > #A.setType(PETSc.Mat.Type.DENSE) > > > > A > > .setUp() > > > > > > Istart > > , Iend = A.getOwnershipRange() > > for I in xrange(Istart, Iend) : > > > > A > > [I,:] = np.random.random(matsize) > > > > > > A > > .assemble() > > Print("Random matrix assembled. Now writing to temporary file ...") > > # save > > > > viewer > > = PETSc.Viewer().createBinary(filename, 'w') > > > > viewer > > .pushFormat(viewer.Format.NATIVE) > > > > viewer > > .view(A) > > Print("Written to ", filename) > > # reload > > Print("Now reloading from ", filename) > > > > viewer_new > > = PETSc.Viewer().createBinary(filename, 'r') > > > > viewer_new > > .pushFormat(viewer.getFormat()) > > > > A_new > > = PETSc.Mat().load(viewer_new) > > assert A_new.equal(A), "Reload unsuccessful" > > Print("Reload successful") > > ======================================================================================== > > > > > > > > stderr output for parallel dense matrices: > > ======================================================================================== > > Random matrix assembled. Now writing to temporary file ... > > > > Written to tmpMatrix-A > > . > > dat > > Now reloading from tmpMatrix-A > > . > > dat > > Traceback > > (most recent call last): > > > > File > > "./test_binwrite.py", line 36, in > > > > Traceback > > (most recent call last): > > > > A_new > > = PETSc.Mat().load(viewer_new) > > > > File > > "./test_binwrite.py", line 36, in > > > > File > > "PETSc/Mat.pyx", line 642, in petsc4py.PETSc.Mat.load (src/petsc4py.PETSc.c:118243) > > > > A_new > > = PETSc.Mat().load(viewer_new) > > > > File > > "PETSc/Mat.pyx", line 642, in petsc4py.PETSc.Mat.load (src/petsc4py.PETSc.c:118243) > > > > petsc4py > > .PETSc.Errorpetsc4py.PETSc.Error: : error code 55 > > [0] MatLoad() line 1013 in /home/daneel/.local/src/petsc-3.7.2/src/mat/interface/matrix.c > > [0] MatLoad_MPIAIJ() line 2947 in /home/daneel/.local/src/petsc-3.7.2/src/mat/impls/aij/mpi/mpiaij.c > > [0] MatLoad_MPIAIJ() line 2947 in /home/daneel/.local/src/petsc-3.7.2/src/mat/impls/aij/mpi/mpiaij.c > > [0] Out of memory. Allocated: 0, Used by process: 23687168 > > [0] Memory requested 5942180016 > > > > error code > > 55 > > [1] MatLoad() line 1013 in /home/daneel/.local/src/petsc-3.7.2/src/mat/interface/matrix.c > > [1] MatLoad_MPIAIJ() line 2967 in /home/daneel/.local/src/petsc-3.7.2/src/mat/impls/aij/mpi/mpiaij.c > > [1] MatLoad_MPIAIJ() line 2967 in /home/daneel/.local/src/petsc-3.7.2/src/mat/impls/aij/mpi/mpiaij.c > > [1] Out of memory. Allocated: 0, Used by process: 23506944 > > [1] Memory requested 18446744072415633408 > > > > -------------------------------------------------------------------------- > > mpirun noticed that the job aborted, but has no info as to the process > > that caused that situation > > . > > > > -------------------------------------------------------------------------- > > > > ======================================================================================== > > > > > > > > > > > > > > > > -- > > --- > > Analabha Roy > > Postdoctoral Fellow > > National Institute of Theoretical Physics (NiTheP) > > Private Bag X1, Matieland, > > Stellenbosch, South Africa,7602 > > Emails: daneel at utexas.edu, daneel at sun.ac.za, hariseldon99 at gmail.com > > Webpage: http://www.ph.utexas.edu/~daneel/ > > > > > > > -- > --- > Analabha Roy > Postdoctoral Fellow > National Institute of Theoretical Physics (NiTheP) > Private Bag X1, Matieland, > Stellenbosch, South Africa,7602 > Emails: daneel at utexas.edu, daneel at sun.ac.za, hariseldon99 at gmail.com > Webpage: http://www.ph.utexas.edu/~daneel/ From dzw.pku at gmail.com Thu Jun 30 17:49:28 2016 From: dzw.pku at gmail.com (Duan Zhaowen) Date: Thu, 30 Jun 2016 17:49:28 -0500 Subject: [petsc-users] user provided local preconditioner with additive schwarz preconditioner Message-ID: Hi, I was trying to define a shell preconditioner for local partition, and let it work with global additive schwarz preconditioner for parallel computing. Is any one can give an example on this kind of preconditioners combination. Thanks! ZW -------------- next part -------------- An HTML attachment was scrubbed... URL: From bsmith at mcs.anl.gov Thu Jun 30 18:09:40 2016 From: bsmith at mcs.anl.gov (Barry Smith) Date: Thu, 30 Jun 2016 18:09:40 -0500 Subject: [petsc-users] user provided local preconditioner with additive schwarz preconditioner In-Reply-To: References: Message-ID: I don't think we have an example that does exactly that. If you are working with KSP directly and not SNES here is how to proceed KSPGetPC(ksp,&pc); PCSetType(pc,PCASM); KSPSetOperators() KSPSetUp() <--- this must be called before the code below otherwise the subksps don't exist yet PetscInt n_local; KSP *subksps; PCASMGetSubKSP(pc,&n_local,NULL,&subksps); for (i=0; i On Jun 30, 2016, at 5:49 PM, Duan Zhaowen wrote: > > Hi, > > I was trying to define a shell preconditioner for local partition, and let it work with global additive schwarz preconditioner for parallel computing. Is any one can give an example on this kind of preconditioners combination. Thanks! > > ZW