[petsc-users] PT-SCOTCH not available

Jinquan Zhong jzhong at scsolutions.com
Thu Oct 25 19:32:25 CDT 2012


The log file says:

*******************************************************************************
         UNABLE to CONFIGURE with GIVEN OPTIONS    (see configure.log for details):
-------------------------------------------------------------------------------
Downloaded ptscotch could not be used. Please check install in /data/Users/jzhong/petsc-3.3-p3-option4p2/linux-gnu-c-debug
*******************************************************************************

  File "./config/configure.py", line 311, in petsc_configure
    framework.configure(out = sys.stdout)
  File "/data/Users/jzhong/petsc-3.3-p3-option4p2/config/BuildSystem/config/framework.py", line 933, in configure
    child.configure()
  File "/data/Users/jzhong/petsc-3.3-p3-option4p2/config/BuildSystem/config/package.py", line 526, in configure
    self.executeTest(self.configureLibrary)
  File "/data/Users/jzhong/petsc-3.3-p3-option4p2/config/BuildSystem/config/base.py", line 115, in executeTest
    ret = apply(test, args,kargs)
  File "/data/Users/jzhong/petsc-3.3-p3-option4p2/config/BuildSystem/config/package.py", line 453, in configureLibrary
    for location, directory, lib, incl in self.generateGuesses():
  File "/data/Users/jzhong/petsc-3.3-p3-option4p2/config/BuildSystem/config/package.py", line 235, in generateGuesses
    raise RuntimeError('Downloaded '+self.package+' could not be used. Please check install in '+d+'\n')



Jinquan



-----Original Message-----
From: petsc-users-bounces at mcs.anl.gov [mailto:petsc-users-bounces at mcs.anl.gov] On Behalf Of Jinquan Zhong
Sent: Thursday, October 25, 2012 5:31 PM
To: 'PETSc users list'
Subject: Re: [petsc-users] PT-SCOTCH not available

I got this


===============================================================================                             
TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:133)                            
*******************************************************************************
         UNABLE to CONFIGURE with GIVEN OPTIONS    (see configure.log for details):
-------------------------------------------------------------------------------
Downloaded ptscotch could not be used. Please check install in /data/Users/jzhong/petsc-3.3-p3-option4p2/linux-gnu-c-debug

Not quite working yet.

Jinquan


-----Original Message-----
From: petsc-users-bounces at mcs.anl.gov [mailto:petsc-users-bounces at mcs.anl.gov] On Behalf Of Satish Balay
Sent: Thursday, October 25, 2012 5:14 PM
To: PETSc users list
Subject: Re: [petsc-users] PT-SCOTCH not available

try using the attached patch and see if it works.

patch -Np1 < mumps-ptscotch.py
rm -rf externalpackages/scotch*
./configure ....

Satish

On Thu, 25 Oct 2012, Jinquan Zhong wrote:

> Yes, I used
> 
> ./configure \
> --with-blas-lib=/data/Users/jzhong/scalapack-2.0.1/lib/librefblas.a  \ 
> --with-lapack-lib=/data/Users/jzhong/scalapack-2.0.1/lib/libreflapack.
> a  \ --download-blacs --download-scalapack \
> --with-mpi-dir=/data/Users/jzhong/mpich2 \ 
> --with-mpiexec=/data/Users/jzhong/mpich2/bin/mpiexec \ 
> --with-cmake=/data/Users/jzhong/CMAKE/cmake-2.8.8/bin/cmake \ 
> --with-scalar-type=complex --with-precision=double --with-clanguage=c 
> --with-fortran-kernels=generic \
> --with-ptscotch=1 --download-ptscotch=yes \ --download-mumps 
> --download-superlu_dist \ --download-parmetis --download-metis 
> --with-fortran-interfaces
> 
> Jinquan
> 
> 
> -----Original Message-----
> From: petsc-users-bounces at mcs.anl.gov 
> [mailto:petsc-users-bounces at mcs.anl.gov] On Behalf Of Satish Balay
> Sent: Thursday, October 25, 2012 3:49 PM
> To: PETSc users list
> Subject: Re: [petsc-users] PT-SCOTCH not available
> 
> do you also have parmetis installed?
> 
> Satish
> 
> On Thu, 25 Oct 2012, Jinquan Zhong wrote:
> 
> > Dear PETSc folks,
> > 
> > I am trying to install PT-SCOTCH as the external package for PETSc.  I used
> >                 --with-ptscotch=1
> > --download-ptscotch=yes
> > 
> > to install PETSc.  No complains.
> > 
> > But when I tried to use PT-SCOTCH, here is the message I got ...
> > ZMUMPS 4.10.0
> > L U Solver for unsymmetric matrices
> > Type of parallelism: Working host
> > 
> > ****** ANALYSIS STEP ********
> > 
> > PT-SCOTCH not available.
> > Aborting.
> > ...
> > 
> > Any idea to make it work?
> > 
> > Thanks,
> > 
> > Jinquan
> > 
> 
> 


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