Petsc with hypre
Nguyen, Hung V ERDC-ITL-MS
Hung.V.Nguyen at usace.army.mil
Wed Jul 30 09:18:58 CDT 2008
Hello Keita,
>Did this error happen with Cray's PETSc?
I am running my code in Cray XT3 (at ERDC). Please find the current and
available modules in the system below.
I think I amn't using Cray's PETSC since I am using the one from the location
/usr/local/usp/PETtools/CE/MATH/petsc-2.3.3-p3.
How do I use Cray's PETSC? Which module I need to load?
Thanks,
-Hung
--- current module:
hvnguyen:sapphire12% module list
Currently Loaded Modulefiles:
1) modules/3.1.6 5) xt-libsci/1.5.52 9) xt-pbs/5.3.5
13) xt-catamount/1.5.52 17) Base-opts/1.5.52
2) MySQL/4.0.27 6) xt-mpt/1.5.52 10) xt-service/1.5.52
14) xt-boot/1.5.52
3) acml/3.6 7) xt-pe/1.5.52 11) xt-libc/1.5.52
15) xt-crms/1.5.52
4) pgi/7.0.6 8) PrgEnv-pgi/1.5.52 12) xt-os/1.5.52
16) xt-lustre-ss/1.5.52
hvnguyen:sapphire12% module avai
---------------------------------------------------------------
/opt/modulefiles
---------------------------------------------------------------Base-opts/1.4.
10 craypat/3.2.3 xt-catamount/1.4.43
xt-mpt/1.4.10
Base-opts/1.4.38 dwarf/6.10.0 xt-catamount/1.5.16
xt-mpt/1.4.38
Base-opts/1.4.43 elf/0.8.6(default) xt-catamount/1.5.27
xt-mpt/1.4.43
Base-opts/1.5.16 fftw/2.1.5(default) xt-catamount/1.5.39
xt-mpt/1.5.16
Base-opts/1.5.27 fftw/3.1.1
xt-catamount/1.5.39.nic10 xt-mpt/1.5.27
Base-opts/1.5.39 gcc/3.2.3 xt-catamount/1.5.52
xt-mpt/1.5.39
Base-opts/1.5.52(default) gcc/4.1.1(default)
xt-craypat/4.0(default) xt-mpt/1.5.52
MySQL/4.0.27 glib/2.4.2 xt-crms/1.4.10
xt-mpt-gnu/1.4.10
PrgEnv/1.4.10 gmalloc xt-crms/1.4.38
xt-mpt-gnu/1.4.38
PrgEnv/1.4.38 gnet/2.0.5 xt-crms/1.4.43
xt-mpt-gnu/1.4.43
PrgEnv/1.4.43 iobuf/1.0.2 xt-crms/1.5.16
xt-mpt-gnu/1.5.16
PrgEnv-gnu/1.4.10 iobuf/1.0.5(default) xt-crms/1.5.27
xt-mpt-gnu/1.5.27
PrgEnv-gnu/1.4.38 iobuf/1.0.6 xt-crms/1.5.39
xt-mpt-gnu/1.5.39
PrgEnv-gnu/1.4.43 libscifft-pgi/1.0.0(default) xt-crms/1.5.52
xt-mpt-gnu/1.5.52
PrgEnv-gnu/1.5.16 modules/3.1.6 xt-libc/1.4.10
xt-mpt-pathscale/1.5.39
PrgEnv-gnu/1.5.27 papi/3.2.1(default) xt-libc/1.4.38
xt-mpt-pathscale/1.5.52
PrgEnv-gnu/1.5.39 papi/3.5.0C.1 xt-libc/1.4.43
xt-os/1.4.10
PrgEnv-gnu/1.5.52(default) pathscale/2.5 xt-libc/1.5.16
xt-os/1.4.38
PrgEnv-pathscale/1.5.39 pathscale/3.0(default) xt-libc/1.5.27
xt-os/1.4.43
PrgEnv-pathscale/1.5.52 pgi/6.2.5 xt-libc/1.5.39
xt-os/1.5.16
PrgEnv-pgi/1.4.10 pgi/7.0.2 xt-libc/1.5.52
xt-os/1.5.27
PrgEnv-pgi/1.4.38 pgi/7.0.3 xt-libsci/1.4.10
xt-os/1.5.39
PrgEnv-pgi/1.4.43 pgi/7.0.4 xt-libsci/1.4.38
xt-os/1.5.52
PrgEnv-pgi/1.5.16 pgi/7.0.5 xt-libsci/1.4.43
xt-papi/3.5.99a(default)
PrgEnv-pgi/1.5.27 pgi/7.0.6(default) xt-libsci/1.5.16
xt-pbs/5.3.5
PrgEnv-pgi/1.5.39 pgi/7.0.7 xt-libsci/1.5.27
xt-pe/1.4.38
PrgEnv-pgi/1.5.52(default) pgi/7.1.2 xt-libsci/1.5.39
xt-pe/1.4.43
acml/3.0 pgi/7.1.4
xt-libsci/1.5.52(default) xt-pe/1.5.16
acml/3.6(default) pgi32/6.1.1 xt-libsci/10.2.0
xt-pe/1.5.27
acml/4.0.1a pkg-config/0.15.0 xt-lsfhpc/6.1
xt-pe/1.5.39
acml-gnu/3.0 xt-boot/1.4.10 xt-lustre-ss/1.4.10
xt-pe/1.5.52
acml-large_arrays/3.0 xt-boot/1.4.38 xt-lustre-ss/1.4.38
xt-service/1.4.10
acml-mp/3.0 xt-boot/1.4.43 xt-lustre-ss/1.4.43
xt-service/1.4.38
apprentice2/3.0.1(default) xt-boot/1.5.16 xt-lustre-ss/1.5.16
xt-service/1.4.43
apprentice2/3.2.3 xt-boot/1.5.27 xt-lustre-ss/1.5.27
xt-service/1.5.16
apprentice2/4.0 xt-boot/1.5.39 xt-lustre-ss/1.5.39
xt-service/1.5.27
craypat/3.0.1 xt-boot/1.5.52
xt-lustre-ss/1.5.39.bogl1 xt-service/1.5.39
craypat/3.1.1 xt-catamount/1.4.10
xt-lustre-ss/1.5.39.nic10 xt-service/1.5.52
craypat/3.1.2(default) xt-catamount/1.4.38 xt-lustre-ss/1.5.52
-----Original Message-----
From: Keita Teranishi [mailto:keita at cray.com]
Sent: Wednesday, July 30, 2008 9:09 AM
To: petsc-users at mcs.anl.gov
Cc: Nguyen, Hung V ERDC-ITL-MS
Subject: RE: Petsc with hypre
Hi Hung,
Did this error happen with Cray's PETSc? Our PETSc supports both hypre and
ParMetis.
Please let me know more details with your error (such as module environment).
Thanks,
================================
Keita Teranishi
Math Software Group
Cray, Inc.
keita at cray.com
================================
-----Original Message-----
From: owner-petsc-users at mcs.anl.gov [mailto:owner-petsc-users at mcs.anl.gov] On
Behalf Of Nguyen, Hung V ERDC-ITL-MS
Sent: Wednesday, July 30, 2008 8:57 AM
To: petsc-users at mcs.anl.gov
Subject: Petsc with hypre
Dear,
I tried to run PETSC with hypre on CrayXT3 system and got the error message
below. I didn't install PETSC so I don't know whether it was installed with
hypre option or not. So if I need to install PETSC with using hypre option,
then please send me the instruction for installation (and also using
parMeTiS).
I appreciate your help,
Regards,
-hung
hvnguyen:sapphire09% yod -np 16 ./fw -ksp_type richardson -pc_type hypre
-pc_hypre_type boomeramg -pc_hypre_boomeramg_max_iter 4
-pc_hypre_boomeramg_tol 1.0e-15
[10]PETSC ERROR: [9]PETSC ERROR: [13]PETSC ERROR: [11]PETSC ERROR: [3]PETSC
ERROR: [2]PETSC ERROR: [8]PETSC ERROR: [7]PETSC ERROR: [14]PETSC ERROR:
[0]PETSC ERROR: [5]PETSC ERROR: [12]PETSC ERROR: [15]PETSC ERROR: [6]PETSC
ERROR: [1]PETSC ERROR: [4]PETSC ERROR: --------------------- Error Message
------------------------------------
--------------------- Error Message ------------------------------------
--------------------- Error Message ------------------------------------
--------------------- Error Message ------------------------------------
--------------------- Error Message ------------------------------------
--------------------- Error Message ------------------------------------
--------------------- Error Message ------------------------------------
--------------------- Error Message ------------------------------------
--------------------- Error Message ------------------------------------
--------------------- Error Message ------------------------------------
--------------------- Error Message ------------------------------------
--------------------- Error Message ------------------------------------
--------------------- Error Message ------------------------------------
--------------------- Error Message ------------------------------------
--------------------- Error Message ------------------------------------
--------------------- Error Message ------------------------------------
[10]PETSC ERROR: [9]PETSC ERROR: [13]PETSC ERROR: [11]PETSC ERROR: [3]PETSC
ERROR: [2]PETSC ERROR: [8]PETSC ERROR: [7]PETSC ERROR: [14]PETSC ERROR:
[0]PETSC ERROR: [5]PETSC ERROR: [12]PETSC ERROR: [15]PETSC ERROR: [6]PETSC
ERROR: [1]PETSC ERROR: [4]PETSC ERROR: Unknown type. Check for miss-spelling
or missing external package needed for type!
Unknown type. Check for miss-spelling or missing external package needed for
type!
Unknown type. Check for miss-spelling or missing external package needed for
type!
Unknown type. Check for miss-spelling or missing external package needed for
type!
[10]PETSC ERROR: [9]PETSC ERROR: [13]PETSC ERROR: [11]PETSC ERROR: [3]PETSC
ERROR: [2]PETSC ERROR: [8]PETSC ERROR: [7]PETSC ERROR: [14]PETSC ERROR:
[0]PETSC ERROR: [5]PETSC ERROR: [12]PETSC ERROR: [15]PETSC ERROR: [6]PETSC
ERROR: [1]PETSC ERROR: [4]PETSC ERROR: Unable to find requested PC type
hypre!
Unable to find requested PC type hypre!
Unable to find requested PC type hypre!
Unable to find requested PC type hypre!
Unable to find requested PC type hypre!
Unable to find requested PC type hypre!
Unable to find requested PC type hypre!
Unable to find requested PC type hypre!
Unable to find requested PC type hypre!
Unable to find requested PC type hypre!
Unable to find requested PC type hypre!
Unable to find requested PC type hypre!
Unable to find requested PC type hypre!
Unable to find requested PC type hypre!
Unable to find requested PC type hypre!
Unable to find requested PC type hypre!
[10]PETSC ERROR: [9]PETSC ERROR: [13]PETSC ERROR: [11]PETSC ERROR: [3]PETSC
ERROR: [2]PETSC ERROR: [8]PETSC ERROR: [7]PETSC ERROR: [14]PETSC ERROR:
[0]PETSC ERROR: [5]PETSC ERROR: [12]PETSC ERROR: [15]PETSC ERROR: [6]PETSC
ERROR: [1]PETSC ERROR: [4]PETSC ERROR:
------------------------------------------------------------------------
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