Update to PETSc Fortran interfaces
Barry Smith
bsmith at mcs.anl.gov
Fri Nov 21 21:56:13 CST 2008
I have pushed a set of updates to the PETSc Fortran interfaces. To
compile with these you
should do a rm -rf exernalpackages/sowing* $PETSC_ARCH/conf/sowing
then rerun config/configure.py
If you do not wish to experiment with the new features you do not need
to do this.
For most users of PETSc from Fortran this need not change anything
at all and you
can continue to use PETSc as always.
If you config/configure.py with the additional option --with-fortran-
interfaces then Bill Gropp's
sowing package will automatically generate Fortran interface
definitions for all the PETSc functions.
You can utilize these interfaces (for type checking of arguments to
function calls) simply include
in each Fortran subroutine you write
#include "finclude/petscvec.h90" etc after the
#include "finclude/petscvec.h" etc you currently use.
It is also now much easier to use PETSc Fortran modules. I've
attached the new manual
page for UsingFortran below. I don't particularly recommend using the
Fortran modules
instead of the #include "finclude/petscvec.h90" etc. They both provide
the same functionality
(argument type checking) the modules are just for people who "prefer"
doing things
in a more "Fortran way."
Please report any build problems etc to petsc-maint at mcs.anl.gov
Barry
UsingFortran - Fortran can be used with PETSc in four distinct
approaches
$ 1) classic Fortran 77 style
$#include "petscXXX.h" to work with material from the XXX component of
PETSc
$ XXX variablename
$ You cannot use this approach if you wish to use the Fortran 90
specific PETSc routines
$ which end in F90; such as VecGetArrayF90()
$
$ 2) classic Fortran 90 style
$#include "petscXXX.h"
$#include "petscXXX.h90" to work with material from the XXX component
of PETSc
$ XXX variablename
$
$ 3) Using Fortran modules
$#include "petscXXXdef.h"
$ use petscXXXX
$ XXX variablename
$
$ 4) Use Fortran modules and Fortran data types for PETSc types
$#include "petscXXXdef.h"
$ use petscXXXX
$ type(XXX) variablename
$ To use this approach you must config/configure.py PETSc with
the additional
$ option --with-fortran-datatypes You cannot use the type(XXX)
declaration approach without using Fortran modules
Finally if you absolutely do not want to use any #include you can
use either
$ 3a) skip the #include BUT you cannot use any PETSc data type
names like Vec, Mat, PetscInt, PetscErrorCode etc
$ and you must declare the variables as integer, for example
$ integer variablename
$
$ 4a) skip the #include, you use the object types like type(Vec)
type(Mat) but cannot use the data type
$ names like PetscErrorCode, PetscInt etc. again for those you
must use integer
We recommend either 2 or 3. Approaches 2 and 3 provide type
checking for most PETSc function calls; 4 has type checking
for only a few PETSc functions.
Fortran type checking with interfaces is strick, this means you
cannot pass a scalar value when an array value
is expected (even though it is legal Fortran). For example when
setting a single value in a matrix with MatSetValues()
you cannot have something like
$ PetscInt row,col
$ PetscScalar val
$ ...
$ call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr)
You must instead have
$ PetscInt row(1),col(1)
$ PetscScalar val(1)
$ ...
$ call MatSetValues(mat,1,row,1,col,val,INSERT_VALUES,ierr)
See the example src/vec/vec/examples/tutorials/ex20f90.F90 for an
example that can use all four approaches
Developer Notes: The finclude/petscXXXdef.h contain all the
#defines (would be typedefs in C code) these
automatically include their predecessors; for example finclude/
petscvecdef.h includes finclude/petscisdef.h
The finclude/petscXXXX.h contain all the parameter statements for
that package. These automatically include
their finclude/petscXXXdef.h file but DO NOT automatically
include their predecessors; for example
finclude/petscvec.h does NOT automatically include finclude/
petscis.h
The finclude/ftn-custom/petscXXXdef.h90 are not intended to be
used directly in code, they define the
Fortran data type type(XXX) (for example type(Vec)) when PETSc is
config/configure.py with the --with-fortran-datatypes option.
The finclude/ftn-custom/petscXXX.h90 (not included directly by
code) contain interface definitions for
the PETSc Fortran stubs that have different bindings then their C
version (for example VecGetArrayF90).
The finclude/ftn-auto/petscXXX.h90 (not included directly by
code) contain interface definitions generated
automatically by "make allfortranstubs".
The finclude/petscXXX.h90 includes the custom finclude/ftn-custom/
petscXXX.h90 and if config/configure.py
was run with --with-fortran-interfaces it also includes the
finclude/ftn-auto/petscXXX.h90 These DO NOT automatically
include their predecessors
Level: beginner
More information about the petsc-dev
mailing list