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</o:shapelayout></xml><![endif]--></head><body lang=EN-US link="#0563C1" vlink="#954F72"><div class=WordSection1><p class=MsoNormal><span style='color:#1F497D'>Hi All: I was able to get the runs working successfully by changing the maxtime flag in the sites file.<o:p></o:p></span></p><p class=MsoNormal><span style='color:#1F497D'><o:p> </o:p></span></p><p class=MsoNormal><span style='color:#1F497D'>Thanks<o:p></o:p></span></p><p class=MsoNormal><span style='color:#1F497D'><o:p> </o:p></span></p><p class=MsoNormal><span style='color:#1F497D'><o:p> </o:p></span></p><div><div style='border:none;border-top:solid #E1E1E1 1.0pt;padding:3.0pt 0in 0in 0in'><p class=MsoNormal><b>From:</b> Matthew Shaxted <br><b>Sent:</b> Wednesday, May 27, 2015 9:50 AM<br><b>To:</b> Swift User<br><b>Subject:</b> Channel Timeout on Beagle?<o:p></o:p></p></div></div><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal>Hi Swift Users:<o:p></o:p></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal>I am running some studies on Beagle using Swift, and experiencing a strange error. The Swift scripts run great on cloud and on the Beagle login node, but seems to be timing out for some reason.<o:p></o:p></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal>Does anyone have insight into the cause of this? Thanks for any help.<o:p></o:p></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal>Below is the error I am getting:<o:p></o:p></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal>Host: cluster<o:p></o:p></p><p class=MsoNormal>Directory: epsweep-run004/jobs/a/RunEP-ai2mic9m exception @ swift-int-staging.k, line: 181<o:p></o:p></p><p class=MsoNormal>Caused by: exception @ swift-int-staging.k, line: 177<o:p></o:p></p><p class=MsoNormal>Caused by: <span style='background:yellow;mso-highlight:yellow'>Block task failed: Connection to worker lost</span><o:p></o:p></p><p class=MsoNormal>org.globus.cog.coaster.TimeoutException: <span style='background:yellow;mso-highlight:yellow'>Channel timed out</span>. lastTime=150526-142313.128,<o:p></o:p></p><p class=MsoNormal>50526-142514.107, channel=TCPChannel [type: server, contact: 0526-0802460-000014-000456<o:p></o:p></p><p class=MsoNormal>at org.globus.cog.coaster.channels.AbstractCoasterChannel.checkTimeouts(AbstractCoasterChannel.java:133)<o:p></o:p></p><p class=MsoNormal> at org.globus.cog.coaster.channels.AbstractCoasterChannel$1.run(AbstractCoasterChannel.java:124)<o:p></o:p></p><p class=MsoNormal> at java.util.TimerThread.mainLoop(Timer.java:566)<o:p></o:p></p><p class=MsoNormal> at java.util.TimerThread.run(Timer.java:516)<o:p></o:p></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal>Below is my sites.xml file:<o:p></o:p></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal><pool handle="cluster"><o:p></o:p></p><p class=MsoNormal> <execution provider="coaster" jobmanager="local:pbs" /><o:p></o:p></p><p class=MsoNormal> <profile namespace="globus" key="project">CI-SES000178</profile><o:p></o:p></p><p class=MsoNormal> <profile namespace="globus" key="jobsPerNode">24</profile><o:p></o:p></p><p class=MsoNormal> <profile namespace="globus" key="lowOverAllocation">100</profile><o:p></o:p></p><p class=MsoNormal> <profile namespace="globus" key="highOverAllocation">100</profile><o:p></o:p></p><p class=MsoNormal> <profile namespace="globus" key="providerAttributes">pbs.aprun;pbs.mpp;depth=24</profile><o:p></o:p></p><p class=MsoNormal> <profile namespace="globus" key="maxtime">10800</profile><o:p></o:p></p><p class=MsoNormal> <profile namespace="globus" key="maxWalltime">01:25:00</profile><o:p></o:p></p><p class=MsoNormal> <profile namespace="globus" key="userHomeOverride">/lustre/beagle2/mattshax/epsweep/swifthome</profile><o:p></o:p></p><p class=MsoNormal> <profile namespace="globus" key="slots">20</profile><o:p></o:p></p><p class=MsoNormal> <profile namespace="globus" key="maxnodes">600</profile><o:p></o:p></p><p class=MsoNormal> <profile namespace="globus" key="nodeGranularity">1</profile><o:p></o:p></p><p class=MsoNormal> <profile namespace="karajan" key="jobThrottle">180</profile><o:p></o:p></p><p class=MsoNormal> <profile namespace="karajan" key="initialScore">10000</profile><o:p></o:p></p><p class=MsoNormal> <!-- <profile namespace="karajan" key="workerLoggingLevel">trace</profile> --><o:p></o:p></p><p class=MsoNormal> <workdirectory>/dev/shm/mattshax/swiftapp</workdirectory><o:p></o:p></p><p class=MsoNormal> </pool><o:p></o:p></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal style='margin-bottom:14.0pt;line-height:13.0pt'><span style='font-size:9.0pt;font-family:"Arial","sans-serif";color:#EF2B2D'>MATTHEW SHAXTED<o:p></o:p></span></p><p class=MsoNormal style='margin-bottom:14.0pt;line-height:13.0pt'><span style='font-size:9.0pt;font-family:"Arial","sans-serif";color:gray'>SKIDMORE, OWINGS & MERRILL LLP<br>224 SOUTH MICHIGAN AVENUE<br>CHICAGO, IL 60604<br>T (312) 360-4368<br><a href="mailto:MATTHEW.SHAXTED@SOM.COM"><span style='color:blue'>MATTHEW.SHAXTED@SOM.COM</span></a><o:p></o:p></span></p><p class=MsoNormal style='margin-bottom:14.0pt;line-height:13.0pt'><span style='font-family:"Arial","sans-serif";color:gray'><o:p> </o:p></span></p><p class=MsoNormal style='margin-bottom:14.0pt'><a href="http://www.som.com/"><span style='font-family:"Arial","sans-serif";color:black;text-decoration:none'><img border=0 width=123 height=45 id="Picture_x0020_1" src="cid:image001.png@01D09885.EDB6D900" alt="cid:image001.png@01CF9071.6FB46030"></span></a><a name="_GoBack"></a><span style='font-family:"Arial","sans-serif";color:black'><o:p></o:p></span></p><p class=MsoNormal style='line-height:12.0pt'><span style='font-size:8.0pt;font-family:"Arial","sans-serif";color:gray'>The information contained in this communication may be confidential, is intended only for the use of the recipient(s) named above, and may be legally privileged. 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If you have any questions concerning this message, please contact the sender.</span><span style='font-family:"Arial","sans-serif";color:gray'><o:p></o:p></span></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal><span style='font-size:12.0pt;font-family:"Verdana","sans-serif";color:black'><img border=0 width=393 height=19 id="Picture_x0020_2" src="cid:image002.gif@01D09885.EDB6D900" alt="http://intranet.som.com/common/admin/file.cfm?f=%2Fresources%2Fcontent%2F5%2F0%2F4%2F4%2F6%2F4%2F0%2F3%2Fdocuments%2Fimagea560bf%2Egif%406e10073b%2E30854c37"></span><o:p></o:p></p><p class=MsoNormal><o:p> </o:p></p></div></body></html>