<div dir="ltr">Hi Greg,<div><br></div><div>I think having a script that translates from showq output to qstat style output is possible. Could you please send some example showq output from your cluster? Thanks!</div><div><br>
</div><div>Regards,</div><div>David</div></div><div class="gmail_extra"><br><br><div class="gmail_quote">On Tue, Mar 4, 2014 at 6:53 PM, Bronevetsky, Greg <span dir="ltr"><<a href="mailto:bronevetsky1@llnl.gov" target="_blank">bronevetsky1@llnl.gov</a>></span> wrote:<br>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1f497d">After some poking around I got it to mostly work. One issue is that although Moab accepts PBS scripts it does not implement its commands, such as qsub and qstat.
I was able to overcome the first issue by creating a soft link named “qsub” that points to msub. However, I don’t know what to do about qstat. When I do the same linking trick Swift throws errors, probably because it cannot parse the output. Is there a script
that takes the output of showq and formats it qstat style? Thanks!<u></u><u></u></span></p><div class="">
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1f497d"><u></u> <u></u></span></p>
<p class="MsoNormal"><span style="font-size:10.5pt;font-family:"Calibri","sans-serif";color:#1f497d">Greg Bronevetsky</span><span style="color:#1f497d"><u></u><u></u></span></p>
<p class="MsoNormal"><span style="font-size:10.5pt;font-family:"Calibri","sans-serif";color:#1f497d">Lawrence Livermore National Lab</span><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1f497d"><u></u><u></u></span></p>
<p class="MsoNormal"><span style="font-size:10.5pt;font-family:"Calibri","sans-serif";color:#1f497d"><a href="tel:%28925%29%20424-5756" value="+19254245756" target="_blank">(925) 424-5756</a></span><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1f497d"><u></u><u></u></span></p>
<p class="MsoNormal"><span style="font-size:10.5pt;font-family:"Calibri","sans-serif";color:#1f497d"><a href="mailto:bronevetsky@llnl.gov" target="_blank">bronevetsky@llnl.gov</a></span><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1f497d"><u></u><u></u></span></p>
<p class="MsoNormal"><span style="font-size:10.5pt;font-family:"Calibri","sans-serif";color:#1f497d"><a href="http://greg.bronevetsky.com" target="_blank">http://greg.bronevetsky.com</a></span><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1f497d"><u></u><u></u></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1f497d"><u></u> <u></u></span></p>
</div><p class="MsoNormal"><b><span style="font-size:10.0pt;font-family:"Tahoma","sans-serif"">From:</span></b><span style="font-size:10.0pt;font-family:"Tahoma","sans-serif""> Yadu Nand [mailto:<a href="mailto:yadudoc1729@gmail.com" target="_blank">yadudoc1729@gmail.com</a>]
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<b>Sent:</b> Friday, February 28, 2014 5:35 PM<br>
<b>To:</b> Bronevetsky, Greg<br>
<b>Cc:</b> <a href="mailto:swift-user@ci.uchicago.edu" target="_blank">swift-user@ci.uchicago.edu</a><br>
<b>Subject:</b> Re: [Swift-user] Swift on MOAB<u></u><u></u></span></p><div><div class="h5">
<p class="MsoNormal"><u></u> <u></u></p>
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<p class="MsoNormal"><span style="font-family:"Arial","sans-serif"">Hi Greg, <u></u><u></u></span></p>
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<p class="MsoNormal"><span style="font-family:"Arial","sans-serif""><u></u> <u></u></span></p>
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<p class="MsoNormal"><span style="font-family:"Arial","sans-serif"">I went through this page : </span><a href="https://computing.llnl.gov/tutorials/moab/" target="_blank">https://computing.llnl.gov/tutorials/moab/</a> which mentions that PBS<u></u><u></u></p>
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<p class="MsoNormal">submit scripts are compatible with Moab. So the Swift PBS provider should work for you.<u></u><u></u></p>
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<p class="MsoNormal"><u></u> <u></u></p>
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<p class="MsoNormal">If there are cluster specific details that differ, we could patch the existing PBS provider to work<u></u><u></u></p>
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<p class="MsoNormal">with your cluster.<u></u><u></u></p>
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<p class="MsoNormal"><u></u> <u></u></p>
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<p class="MsoNormal">Thanks,<u></u><u></u></p>
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<p class="MsoNormal">Yadu<u></u><u></u></p>
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<p class="MsoNormal"><u></u> <u></u></p>
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<p class="MsoNormal" style="margin-bottom:12.0pt"><u></u> <u></u></p>
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<p class="MsoNormal">On Wed, Feb 26, 2014 at 12:38 PM, Bronevetsky, Greg <<a href="mailto:bronevetsky1@llnl.gov" target="_blank">bronevetsky1@llnl.gov</a>> wrote:<u></u><u></u></p>
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<p class="MsoNormal">I’m running on clusters that use MOAB as the main scheduler, with SLURM on each cluster. Jobs need to be submitted to MOAB. Is there a way for Swift to use MOAB as the scheduler?
Thanks!<u></u><u></u></p>
<p class="MsoNormal"> <u></u><u></u></p>
<p class="MsoNormal"><span style="font-size:10.5pt;color:#1f497d">Greg Bronevetsky</span><u></u><u></u></p>
<p class="MsoNormal"><span style="font-size:10.5pt;color:#1f497d">Lawrence Livermore National Lab</span><u></u><u></u></p>
<p class="MsoNormal"><span style="font-size:10.5pt;color:#1f497d"><a href="tel:%28925%29%20424-5756" target="_blank">(925) 424-5756</a></span><u></u><u></u></p>
<p class="MsoNormal"><span style="font-size:10.5pt;color:#1f497d"><a href="mailto:bronevetsky@llnl.gov" target="_blank">bronevetsky@llnl.gov</a></span><u></u><u></u></p>
<p class="MsoNormal"><span style="font-size:10.5pt;color:#1f497d"><a href="http://greg.bronevetsky.com" target="_blank">http://greg.bronevetsky.com</a></span><u></u><u></u></p>
<p class="MsoNormal"> <u></u><u></u></p>
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<u></u><u></u></p>
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<p class="MsoNormal"><u></u> <u></u></p>
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<p class="MsoNormal">-- <u></u><u></u></p>
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<p class="MsoNormal">Yadu Nand B<u></u><u></u></p>
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<p class="MsoNormal"><u></u> <u></u></p>
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