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Has anyone else run successfully on Tukey? <br>
<br>
Can you inspect/post the Swift-generated Cobalt submit script? You
may also want to inspect/post the Cobalt-generated
*.submit.stdout/*.submit.stderr logs.<br>
<br>
On 02/10/2014 08:23 PM, Ketan Maheshwari wrote:<br>
</div>
<blockquote
cite="mid:CAMUuviqJS1nE5k4rx4uWeP0k+EMRSriJmKbmUW_7O-PN3DKCmw@mail.gmail.com"
type="cite">
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<div dir="ltr">Hi,
<div><br>
</div>
<div>Trying some Swift test for Swift-Galaxy demo on Tukey.
Using local:cobalt coaster provider. I am getting the
following error:</div>
<div><br>
</div>
<div>
<div>$ swift -sites.file sites.xml -tc.file tc -config cf
script.swift</div>
<div>Swift 0.94 swift-r6637 cog-r3742</div>
<div><br>
</div>
<div>RunID: 20140211-0216-ryo7slj7</div>
<div>Progress: time: Tue, 11 Feb 2014 02:16:53 +0000</div>
<div>Progress: time: Tue, 11 Feb 2014 02:17:23 +0000
Submitted:3</div>
<div>Progress: time: Tue, 11 Feb 2014 02:17:53 +0000
Submitted:3</div>
<div>Progress: time: Tue, 11 Feb 2014 02:17:58 +0000
Submitted:2 Active:1</div>
<div>Execution failed:</div>
<div><span class="" style="white-space:pre"> </span>Exception
in sh:</div>
<div> Arguments:
[gpfs/mira-home/ketan/galaxy-dist/database/files/000/dataset_1.dat,
0]</div>
<div> Host: tukey</div>
<div> Directory:
script-20140211-0216-ryo7slj7/jobs/u/sh-uv25u9ml</div>
<div>Caused by:</div>
<div>
<span class="" style="white-space:pre"> </span>Block task
failed:</div>
<div><br>
</div>
<div><br>
</div>
<div><span class="" style="white-space:pre"> </span>anapp,
script.swift, line 13</div>
</div>
<div><br>
</div>
<div>Tried many different options in swift.properties to no
avail. </div>
<div><br>
</div>
<div>Also tried the ATPESC 2013 tutorial setup but scripts fail
with same pattern/error messages.</div>
<div><br>
</div>
<div>Attaching the tarball with config, sites file.</div>
<div><br>
</div>
<div>Thanks for any suggestions.</div>
<div><br>
</div>
<div>Ketan</div>
</div>
<br>
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</blockquote>
<br>
<br>
<pre class="moz-signature" cols="72">--
Justin M Wozniak</pre>
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