Yes. There is no *avgResults.Rdata under shared directory, only input file, scripts, wrapper.sh and seq.sh.<br><br>Jing<br><br><div><span class="gmail_quote">On 8/20/07, <b class="gmail_sendername">Mihael Hategan</b> <<a href="mailto:hategan@mcs.anl.gov">

hategan@mcs.anl.gov</a>> wrote:</span><blockquote class="gmail_quote" style="border-left: 1px solid rgb(204, 204, 204); margin: 0pt 0pt 0pt 0.8ex; padding-left: 1ex;">Not much we can do if the filesystem is broken.<br>

Did you check to confirm that the file is not there? Mihael On Mon, 2007-08-20 at 12:07 -0500, Jing Tie wrote: > Hi, > > Here is another problem. It seems like something wrong with GFS > system.

<br>><br>> site: MIT_CMS<br>> gatekeeper: <a href="http://ce01.cmsaf.mit.edu">ce01.cmsaf.mit.edu</a><br>> app_dir: /osg/app<br>> data_dir: /osg/data<br>> condor_dir: /usr/local/condor/bin<br>> R_dir: /osg/app/R-

2.5.1/bin/R<br>><br>> output:<br>> Application exception: Exception in getFile<br>>         task:transfer @ vdl-int.k, line: 235<br>>         vdl:dostageout @ vdl-int.k, line: 378<br>>         vdl:execute2 @ 

execute-default.k, line: 22<br>>         vdl:execute @ sid-wf1.kml, line: 20<br>>         wavelettransf @ sid-wf1.kml, line: 362<br>>         batchtrials @ sid-wf1.kml, line: 402<br>>         vdl:mains @ sid-wf1.kml

, line: 399<br>> Caused by: org.globus.cog.abstraction.impl.file.FileResourceException:<br>> Exception in getFile<br>> Caused by: org.globus.ftp.exception.ServerException: Server refused<br>> performing the request. Custom message:  (error code 1)  cwtsmall

<br>> failed<br>> Provenance graph saved in sid-wf1-7thy5mbfh09e1.dot<br>> The following errors have occurred:<br>> 1. Application "cwtsmall" failed (Exception in getFile<br>> Caused by:<br>> Server refused performing the request. Custom message:  (error code

<br>> 1)<br>> [Nested exception message:  Nested exception is<br>> org.globus.ftp.exception.UnexpectedReplyCodeException :<br>> Custom message: Unexpected reply:<br>> 500-Command failed. :<br>> globus_gridftp_server_file.c:globus_l_gfs_file_send:2190:

<br>> 500-globus_l_gfs_file_open failed.<br>> 500-globus_gridftp_server_file.c:globus_l_gfs_file_open:1694:<br>> 500-globus_xio_register_open failed.<br>> 500-globus_xio_file_driver.c:globus_l_xio_file_open:438:

<br>> 500-Unable to open<br>> file /osgfs/data/sid-wf1-7thy5mbfh09e1/shared//101-FBchannel16_cwt-avgResults.Rdata<br>> 500-globus_xio_file_driver.c:globus_l_xio_file_open:381:<br>> 500-System error in open: No such file or directory

<br>> 500-globus_xio: A system call failed: No such file or directory<br>> 500 End.])<br>>         Arguments: "scripts/runWaveletsAvg.R, 101, FB"<br>>         Host: UCSDT2<br>>         Directory: sid-wf1-7thy5mbfh09e1/cwtsmall-mb3l3rfi

<br>>         STDERR:<br>>         STDOUT:<br>> Errors detected. Cleanup not done.<br>> Execution completed with errors<br>>         sys:throw @ vdl.k, line: 140<br>>         vdl:mains @ sid-wf1.kml, line: 399

<br>>         at<br>> org.globus.cog.karajan.workflow.nodes.FlowNode.fail(FlowNode.java:413)<br>>         at<br>> org.globus.cog.karajan.workflow.nodes.FlowNode.fail(FlowNode.java:417)<br>>         at<br>> 

org.globus.cog.karajan.workflow.nodes.GenerateErrorNode.post<br>> (GenerateErrorNode.java:28)<br>>         at<br>> org.globus.cog.karajan.workflow.nodes.AbstractSequentialWithArguments.childCompleted<br>>         at

<br>> org.globus.cog.karajan.workflow.nodes.Sequential.notificationEvent(Sequential.java :33)<br>>         at<br>> org.globus.cog.karajan.workflow.nodes.FlowNode.event(FlowNode.java:334)<br>>         at<br>> 

org.globus.cog.karajan.workflow.events.EventBus.send(EventBus.java:123)<br>>         at org.globus.cog.karajan.workflow.events.EventBus.sendHooked<br>> (EventBus.java:97)<br>>         at<br>> org.globus.cog.karajan.workflow.nodes.FlowNode.fireNotificationEvent

(FlowNode.java:172)<br>>         at<br>> org.globus.cog.karajan.workflow.nodes.FlowNode.complete(FlowNode.java:298)<br>>         at<br>> org.globus.cog.karajan.workflow.nodes.functions.AbstractFunction.executeChildren

(AbstractFunction.java:37)<br>>         at<br>> org.globus.cog.karajan.workflow.nodes.FlowContainer.execute(FlowContainer.java:63)<br>>         at org.globus.cog.karajan.workflow.nodes.FlowNode.restart<br>> (FlowNode.java

:239)<br>>         at<br>> org.globus.cog.karajan.workflow.nodes.FlowNode.start(FlowNode.java:280)<br>>         at<br>> org.globus.cog.karajan.workflow.nodes.FlowNode.controlEvent(FlowNode.java:392)<br>>         at 

org.globus.cog.karajan.workflow.nodes.FlowNode.event<br>> (FlowNode.java:331)<br>>         at<br>> org.globus.cog.karajan.workflow.FlowElementWrapper.event(FlowElementWrapper.java:227)<br>>         at<br>> 

org.globus.cog.karajan.workflow.events.EventBus.send(EventBus.java:123)<br>>         at org.globus.cog.karajan.workflow.events.EventBus.sendHooked<br>> (EventBus.java:97)<br>>         at<br>> org.globus.cog.karajan.workflow.events.EventWorker.run

(EventWorker.java:69)<br>><br>> Many thanks,<br>> Jing<br>> _______________________________________________<br>> Swift-user mailing list<br>> <a href="mailto:Swift-user@ci.uchicago.edu">Swift-user@ci.uchicago.edu

</a><br>> <a href="http://mail.ci.uchicago.edu/mailman/listinfo/swift-user">http://mail.ci.uchicago.edu/mailman/listinfo/swift-user</a><br><br></blockquote></div><br>