<div dir="ltr">Works, thanks!</div><div class="gmail_extra"><br><br><div class="gmail_quote">On Thu, Oct 17, 2013 at 6:02 PM, Mihael Hategan <span dir="ltr"><<a href="mailto:hategan@mcs.anl.gov" target="_blank">hategan@mcs.anl.gov</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">Fixed in r7175.<br>
<span class="HOEnZb"><font color="#888888"><br>
Mihael<br>
</font></span><div class="HOEnZb"><div class="h5"><br>
On Sat, 2013-10-05 at 18:41 -0500, Ketan Maheshwari wrote:<br>
> Attached the dummy apps now.<br>
><br>
><br>
> On Sat, Oct 5, 2013 at 6:40 PM, Ketan Maheshwari <<a href="mailto:ketancmaheshwari@gmail.com">ketancmaheshwari@gmail.com</a><br>
> > wrote:<br>
><br>
> > Hi Mihael,<br>
> ><br>
> > Attached is the simplified version of my script and apps which has the<br>
> > same resume behavior I reported.<br>
> ><br>
> > Thanks,<br>
> > Ketan<br>
> ><br>
> ><br>
> > On Thu, Oct 3, 2013 at 9:52 PM, Mihael Hategan <<a href="mailto:hategan@mcs.anl.gov">hategan@mcs.anl.gov</a>>wrote:<br>
> ><br>
> >> Yeah, please send me the script or a simplified one. I have been using<br>
> >> resume for a while, so it's not a general resume issue.<br>
> >><br>
> >> Mihael<br>
> >><br>
> >> On Thu, 2013-10-03 at 20:45 -0500, Ketan Maheshwari wrote:<br>
> >> > Hi,<br>
> >> ><br>
> >> > It seems that the resume feature in trunk has some problems.<br>
> >> ><br>
> >> > When I try to resume a workflow I am running, I get the following error:<br>
> >> ><br>
> >> > $ swift -sites.file sites.gordon.xml -tc.file apps -config cf<br>
> >> > workflow.swift -resume workflow-20131004-0107-09cxqmd5.0.rlog<br>
> >> > Swift trunk swift-r7089 cog-r3775 (cog modified locally)<br>
> >> > RunID: 20131004-0142-7l1ym0y9<br>
> >> > Progress: time: Fri, 04 Oct 2013 01:42:37 +0000<br>
> >> ><br>
> >> > Execution failed:<br>
> >> > java.lang.IndexOutOfBoundsException: Invalid index [14] for mA_file<br>
> >> > swift:stageIn @ workflow, line: 347<br>
> >> > Caused by: java.lang.IndexOutOfBoundsException: Invalid index [14] for<br>
> >> > mA_file<br>
> >> > at<br>
> >> ><br>
> >> org.griphyn.vdl.mapping.AbstractDataNode.checkNoValue(AbstractDataNode.java:716)<br>
> >> > at<br>
> >> ><br>
> >> org.griphyn.vdl.mapping.AbstractDataNode.waitFor(AbstractDataNode.java:682)<br>
> >> > at org.griphyn.vdl.karajan.lib.Stagein.function(Stagein.java:81)<br>
> >> > at<br>
> >> org.griphyn.vdl.karajan.lib.SwiftFunction.runBody(SwiftFunction.java:108)<br>
> >> > at<br>
> >> ><br>
> >> org.globus.cog.karajan.compiled.nodes.InternalFunction.run(InternalFunction.java:155)<br>
> >> > at<br>
> >> ><br>
> >> org.globus.cog.karajan.compiled.nodes.CompoundNode.runChild(CompoundNode.java:87)<br>
> >> > at<br>
> >> ><br>
> >> org.globus.cog.karajan.compiled.nodes.user.InvocationWrapper.run(InvocationWrapper.java:66)<br>
> >> > at<br>
> >> ><br>
> >> org.globus.cog.karajan.compiled.nodes.CompoundNode.runChild(CompoundNode.java:87)<br>
> >> > at<br>
> >> org.globus.cog.karajan.compiled.nodes.Sequential.run(Sequential.java:22)<br>
> >> > at<br>
> >> ><br>
> >> org.globus.cog.karajan.compiled.nodes.user.Function.runBody(Function.java:99)<br>
> >> > at<br>
> >> ><br>
> >> org.globus.cog.karajan.compiled.nodes.user.InvocationWrapper.runBody(InvocationWrapper.java:245)<br>
> >> > at<br>
> >> ><br>
> >> org.globus.cog.karajan.compiled.nodes.user.InvocationWrapper.run(InvocationWrapper.java:69)<br>
> >> > at<br>
> >> ><br>
> >> org.globus.cog.karajan.compiled.nodes.CompoundNode.runChild(CompoundNode.java:87)<br>
> >> > at<br>
> >> org.globus.cog.karajan.compiled.nodes.Sequential.run(Sequential.java:22)<br>
> >> > at<br>
> >> ><br>
> >> org.globus.cog.karajan.compiled.nodes.CompoundNode.runChild(CompoundNode.java:87)<br>
> >> > at<br>
> >> org.globus.cog.karajan.compiled.nodes.UParallel$1.run(UParallel.java:68)<br>
> >> > at k.thr.LWThread.run(LWThread.java:228)<br>
> >> > at<br>
> >> ><br>
> >> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)<br>
> >> > at<br>
> >> ><br>
> >> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)<br>
> >> > at java.lang.Thread.run(Thread.java:724)<br>
> >> ><br>
> >> > I am trying to reproduce with a simpler example.<br>
> >> ><br>
> >> > Thanks,<br>
> >> > Hi,<br>
> >> ><br>
> >> ><br>
> >> > It seems that the resume feature in trunk has some problems.<br>
> >> ><br>
> >> ><br>
> >> > When I try to resume a workflow I am running, I get the following<br>
> >> > error:<br>
> >> ><br>
> >> ><br>
> >> > $ swift -sites.file sites.gordon.xml -tc.file apps -config cf<br>
> >> > workflow.swift -resume workflow-20131004-0107-09cxqmd5.0.rlog<br>
> >> > Swift trunk swift-r7089 cog-r3775 (cog modified locally)<br>
> >> > RunID: 20131004-0142-7l1ym0y9<br>
> >> > Progress: time: Fri, 04 Oct 2013 01:42:37 +0000<br>
> >> ><br>
> >> ><br>
> >> > Execution failed:<br>
> >> > java.lang.IndexOutOfBoundsException: Invalid index [14] for mA_file<br>
> >> > swift:stageIn @ workflow, line: 347<br>
> >> > Caused by: java.lang.IndexOutOfBoundsException: Invalid index [14] for<br>
> >> > mA_file<br>
> >> > at<br>
> >> ><br>
> >> org.griphyn.vdl.mapping.AbstractDataNode.checkNoValue(AbstractDataNode.java:716)<br>
> >> > at<br>
> >> ><br>
> >> org.griphyn.vdl.mapping.AbstractDataNode.waitFor(AbstractDataNode.java:682)<br>
> >> > at org.griphyn.vdl.karajan.lib.Stagein.function(Stagein.java:81)<br>
> >> > at<br>
> >> ><br>
> >> org.griphyn.vdl.karajan.lib.SwiftFunction.runBody(SwiftFunction.java:108)<br>
> >> > at<br>
> >> ><br>
> >> org.globus.cog.karajan.compiled.nodes.InternalFunction.run(InternalFunction.java:155)<br>
> >> > at<br>
> >> ><br>
> >> org.globus.cog.karajan.compiled.nodes.CompoundNode.runChild(CompoundNode.java:87)<br>
> >> > at<br>
> >> ><br>
> >> org.globus.cog.karajan.compiled.nodes.user.InvocationWrapper.run(InvocationWrapper.java:66)<br>
> >> > at<br>
> >> ><br>
> >> org.globus.cog.karajan.compiled.nodes.CompoundNode.runChild(CompoundNode.java:87)<br>
> >> > at<br>
> >> > org.globus.cog.karajan.compiled.nodes.Sequential.run(Sequential.java:22)<br>
> >> > at<br>
> >> ><br>
> >> org.globus.cog.karajan.compiled.nodes.user.Function.runBody(Function.java:99)<br>
> >> > at<br>
> >> ><br>
> >> org.globus.cog.karajan.compiled.nodes.user.InvocationWrapper.runBody(InvocationWrapper.java:245)<br>
> >> > at<br>
> >> ><br>
> >> org.globus.cog.karajan.compiled.nodes.user.InvocationWrapper.run(InvocationWrapper.java:69)<br>
> >> > at<br>
> >> ><br>
> >> org.globus.cog.karajan.compiled.nodes.CompoundNode.runChild(CompoundNode.java:87)<br>
> >> > at<br>
> >> > org.globus.cog.karajan.compiled.nodes.Sequential.run(Sequential.java:22)<br>
> >> > at<br>
> >> ><br>
> >> org.globus.cog.karajan.compiled.nodes.CompoundNode.runChild(CompoundNode.java:87)<br>
> >> > at org.globus.cog.karajan.compiled.nodes.UParallel<br>
> >> > $1.run(UParallel.java:68)<br>
> >> > at k.thr.LWThread.run(LWThread.java:228)<br>
> >> > at<br>
> >> ><br>
> >> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)<br>
> >> > at java.util.concurrent.ThreadPoolExecutor<br>
> >> > $Worker.run(ThreadPoolExecutor.java:615)<br>
> >> > at java.lang.Thread.run(Thread.java:724)<br>
> >> ><br>
> >> ><br>
> >> > I am trying to reproduce with a simpler example.<br>
> >> ><br>
> >> ><br>
> >> > Thanks,<br>
> >> > --<br>
> >> > Ketan<br>
> >> ><br>
> >> ><br>
> >> > _______________________________________________<br>
> >> > Swift-devel mailing list<br>
> >> > <a href="mailto:Swift-devel@ci.uchicago.edu">Swift-devel@ci.uchicago.edu</a><br>
> >> > <a href="https://lists.ci.uchicago.edu/cgi-bin/mailman/listinfo/swift-devel" target="_blank">https://lists.ci.uchicago.edu/cgi-bin/mailman/listinfo/swift-devel</a><br>
> >><br>
> >><br>
> >><br>
> ><br>
> ><br>
> > --<br>
> > Ketan<br>
> ><br>
> ><br>
><br>
><br>
> Attached the dummy apps now.<br>
><br>
><br>
> On Sat, Oct 5, 2013 at 6:40 PM, Ketan Maheshwari<br>
> <<a href="mailto:ketancmaheshwari@gmail.com">ketancmaheshwari@gmail.com</a>> wrote:<br>
> Hi Mihael,<br>
><br>
><br>
> Attached is the simplified version of my script and apps which<br>
> has the same resume behavior I reported.<br>
><br>
><br>
> Thanks,<br>
> Ketan<br>
><br>
><br>
> On Thu, Oct 3, 2013 at 9:52 PM, Mihael Hategan<br>
> <<a href="mailto:hategan@mcs.anl.gov">hategan@mcs.anl.gov</a>> wrote:<br>
> Yeah, please send me the script or a simplified one. I<br>
> have been using<br>
> resume for a while, so it's not a general resume<br>
> issue.<br>
><br>
> Mihael<br>
><br>
> On Thu, 2013-10-03 at 20:45 -0500, Ketan Maheshwari<br>
> wrote:<br>
> > Hi,<br>
> ><br>
> > It seems that the resume feature in trunk has some<br>
> problems.<br>
> ><br>
> > When I try to resume a workflow I am running, I get<br>
> the following error:<br>
> ><br>
> > $ swift -sites.file sites.gordon.xml -tc.file apps<br>
> -config cf<br>
> > workflow.swift -resume<br>
> workflow-20131004-0107-09cxqmd5.0.rlog<br>
> > Swift trunk swift-r7089 cog-r3775 (cog modified<br>
> locally)<br>
> > RunID: 20131004-0142-7l1ym0y9<br>
> > Progress: time: Fri, 04 Oct 2013 01:42:37 +0000<br>
> ><br>
> > Execution failed:<br>
> > java.lang.IndexOutOfBoundsException: Invalid index<br>
> [14] for mA_file<br>
> > swift:stageIn @ workflow, line: 347<br>
> > Caused by: java.lang.IndexOutOfBoundsException:<br>
> Invalid index [14] for<br>
> > mA_file<br>
> > at<br>
> ><br>
> org.griphyn.vdl.mapping.AbstractDataNode.checkNoValue(AbstractDataNode.java:716)<br>
> > at<br>
> ><br>
> org.griphyn.vdl.mapping.AbstractDataNode.waitFor(AbstractDataNode.java:682)<br>
> > at<br>
> org.griphyn.vdl.karajan.lib.Stagein.function(Stagein.java:81)<br>
> > at<br>
> org.griphyn.vdl.karajan.lib.SwiftFunction.runBody(SwiftFunction.java:108)<br>
> > at<br>
> ><br>
> org.globus.cog.karajan.compiled.nodes.InternalFunction.run(InternalFunction.java:155)<br>
> > at<br>
> ><br>
> org.globus.cog.karajan.compiled.nodes.CompoundNode.runChild(CompoundNode.java:87)<br>
> > at<br>
> ><br>
> org.globus.cog.karajan.compiled.nodes.user.InvocationWrapper.run(InvocationWrapper.java:66)<br>
> > at<br>
> ><br>
> org.globus.cog.karajan.compiled.nodes.CompoundNode.runChild(CompoundNode.java:87)<br>
> > at<br>
> org.globus.cog.karajan.compiled.nodes.Sequential.run(Sequential.java:22)<br>
> > at<br>
> ><br>
> org.globus.cog.karajan.compiled.nodes.user.Function.runBody(Function.java:99)<br>
> > at<br>
> ><br>
> org.globus.cog.karajan.compiled.nodes.user.InvocationWrapper.runBody(InvocationWrapper.java:245)<br>
> > at<br>
> ><br>
> org.globus.cog.karajan.compiled.nodes.user.InvocationWrapper.run(InvocationWrapper.java:69)<br>
> > at<br>
> ><br>
> org.globus.cog.karajan.compiled.nodes.CompoundNode.runChild(CompoundNode.java:87)<br>
> > at<br>
> org.globus.cog.karajan.compiled.nodes.Sequential.run(Sequential.java:22)<br>
> > at<br>
> ><br>
> org.globus.cog.karajan.compiled.nodes.CompoundNode.runChild(CompoundNode.java:87)<br>
> > at org.globus.cog.karajan.compiled.nodes.UParallel<br>
> $1.run(UParallel.java:68)<br>
> > at k.thr.LWThread.run(LWThread.java:228)<br>
> > at<br>
> ><br>
> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)<br>
> > at<br>
> > java.util.concurrent.ThreadPoolExecutor<br>
> $Worker.run(ThreadPoolExecutor.java:615)<br>
> > at java.lang.Thread.run(Thread.java:724)<br>
> ><br>
> > I am trying to reproduce with a simpler example.<br>
> ><br>
> > Thanks,<br>
> > Hi,<br>
> ><br>
> ><br>
> > It seems that the resume feature in trunk has some<br>
> problems.<br>
> ><br>
> ><br>
> > When I try to resume a workflow I am running, I get<br>
> the following<br>
> > error:<br>
> ><br>
> ><br>
> > $ swift -sites.file sites.gordon.xml -tc.file apps<br>
> -config cf<br>
> > workflow.swift -resume<br>
> workflow-20131004-0107-09cxqmd5.0.rlog<br>
> > Swift trunk swift-r7089 cog-r3775 (cog modified<br>
> locally)<br>
> > RunID: 20131004-0142-7l1ym0y9<br>
> > Progress: time: Fri, 04 Oct 2013 01:42:37 +0000<br>
> ><br>
> ><br>
> > Execution failed:<br>
> > java.lang.IndexOutOfBoundsException: Invalid index<br>
> [14] for mA_file<br>
> > swift:stageIn @ workflow, line: 347<br>
> > Caused by: java.lang.IndexOutOfBoundsException:<br>
> Invalid index [14] for<br>
> > mA_file<br>
> > at<br>
> ><br>
> org.griphyn.vdl.mapping.AbstractDataNode.checkNoValue(AbstractDataNode.java:716)<br>
> > at<br>
> ><br>
> org.griphyn.vdl.mapping.AbstractDataNode.waitFor(AbstractDataNode.java:682)<br>
> > at<br>
> org.griphyn.vdl.karajan.lib.Stagein.function(Stagein.java:81)<br>
> > at<br>
> ><br>
> org.griphyn.vdl.karajan.lib.SwiftFunction.runBody(SwiftFunction.java:108)<br>
> > at<br>
> ><br>
> org.globus.cog.karajan.compiled.nodes.InternalFunction.run(InternalFunction.java:155)<br>
> > at<br>
> ><br>
> org.globus.cog.karajan.compiled.nodes.CompoundNode.runChild(CompoundNode.java:87)<br>
> > at<br>
> ><br>
> org.globus.cog.karajan.compiled.nodes.user.InvocationWrapper.run(InvocationWrapper.java:66)<br>
> > at<br>
> ><br>
> org.globus.cog.karajan.compiled.nodes.CompoundNode.runChild(CompoundNode.java:87)<br>
> > at<br>
> ><br>
> org.globus.cog.karajan.compiled.nodes.Sequential.run(Sequential.java:22)<br>
> > at<br>
> ><br>
> org.globus.cog.karajan.compiled.nodes.user.Function.runBody(Function.java:99)<br>
> > at<br>
> ><br>
> org.globus.cog.karajan.compiled.nodes.user.InvocationWrapper.runBody(InvocationWrapper.java:245)<br>
> > at<br>
> ><br>
> org.globus.cog.karajan.compiled.nodes.user.InvocationWrapper.run(InvocationWrapper.java:69)<br>
> > at<br>
> ><br>
> org.globus.cog.karajan.compiled.nodes.CompoundNode.runChild(CompoundNode.java:87)<br>
> > at<br>
> ><br>
> org.globus.cog.karajan.compiled.nodes.Sequential.run(Sequential.java:22)<br>
> > at<br>
> ><br>
> org.globus.cog.karajan.compiled.nodes.CompoundNode.runChild(CompoundNode.java:87)<br>
> > at org.globus.cog.karajan.compiled.nodes.UParallel<br>
> > $1.run(UParallel.java:68)<br>
> > at k.thr.LWThread.run(LWThread.java:228)<br>
> > at<br>
> ><br>
> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)<br>
> > at java.util.concurrent.ThreadPoolExecutor<br>
> > $Worker.run(ThreadPoolExecutor.java:615)<br>
> > at java.lang.Thread.run(Thread.java:724)<br>
> ><br>
> ><br>
> > I am trying to reproduce with a simpler example.<br>
> ><br>
> ><br>
> > Thanks,<br>
> > --<br>
> > Ketan<br>
> ><br>
> ><br>
><br>
> > _______________________________________________<br>
> > Swift-devel mailing list<br>
> > <a href="mailto:Swift-devel@ci.uchicago.edu">Swift-devel@ci.uchicago.edu</a><br>
> ><br>
> <a href="https://lists.ci.uchicago.edu/cgi-bin/mailman/listinfo/swift-devel" target="_blank">https://lists.ci.uchicago.edu/cgi-bin/mailman/listinfo/swift-devel</a><br>
><br>
><br>
><br>
><br>
><br>
><br>
> --<br>
> Ketan<br>
><br>
><br>
><br>
><br>
><br>
><br>
> --<br>
> Ketan<br>
><br>
><br>
<br>
<br>
</div></div></blockquote></div><br><br clear="all"><div><br></div>-- <br><font face="'courier new', monospace">Ketan</font><br><br>
</div>