yadu@Miranda:~$ ssh midway Last login: Wed Mar 20 13:37:02 2013 from 106.198.35.231 =============================================================================== Welcome to Midway Research Computing Center University of Chicago http://rcc.uchicago.edu/ For the RCC Manual see the documentation site at http://docs.rcc.uchicago.edu The RCC Manual is also available in text format at /project/rcc/docs/text or access the online system documentation via the command-line script rcchelp Questions and issues should be sent to help@rcc.uchicago.edu or 773-795-2667. =============================================================================== ******************************************************************************* Attention all users: the Midway early access period is ending soon. Beginning April 1, all jobs will require an allocation of service units. Proposals are due March 8. For more information see: http://docs.rcc.uchicago.edu/access.html#allocations ******************************************************************************* perl: warning: Setting locale failed. perl: warning: Please check that your locale settings: LANGUAGE = (unset), LC_ALL = (unset), LANG = "en_IN" are supported and installed on your system. perl: warning: Falling back to the standard locale ("C"). [yadunand@midway001 ~]$ ls JENKINS jdk-7u15-linux-x64.tar.gz scratch-midway swift-basics-master swiftdemo swiftdemo.v04.tgz temp bundle.tar.gz jdk1.7.0_15 stress swift-basics-master.zip swiftdemo-trunk swiftwork [yadunand@midway001 ~]$ cd swiftdemo-trunk/ [yadunand@midway001 swiftdemo-trunk]$ [yadunand@midway001 swiftdemo-trunk]$ ls README Swift-OSG.2013.0312.pptx data modis.kml modis.swiftx swift.log test.local test.multiple Swift-OSG.2013.0312.pdf bin input modis.swift setup.sh test.beagle test.midway test.uc3 [yadunand@midway001 swiftdemo-trunk]$ cd test.uc3/ [yadunand@midway001 test.uc3]$ ./run + export GLOBUS_HOSTNAME=swift.rcc.uchicago.edu + GLOBUS_HOSTNAME=swift.rcc.uchicago.edu + swift -config cf -sites.file uc3.xml -tc.file tc ../modis.swift -modisdir=input/ Swift 0.94RC4 swift-r6290 cog-r3609 (cog modified locally) RunID: 20130320-1932-gvob9eo0 Progress: time: Wed, 20 Mar 2013 19:32:41 +0000 Progress: time: Wed, 20 Mar 2013 19:32:59 +0000 Submitting:99 Submitted:1 Progress: time: Wed, 20 Mar 2013 19:33:11 +0000 Submitted:100 Progress: time: Wed, 20 Mar 2013 19:33:41 +0000 Submitted:100 Progress: time: Wed, 20 Mar 2013 19:34:11 +0000 Submitted:100 Progress: time: Wed, 20 Mar 2013 19:34:41 +0000 Submitted:100 Progress: time: Wed, 20 Mar 2013 19:34:52 +0000 Stage in:1 Submitted:99 Progress: time: Wed, 20 Mar 2013 19:35:11 +0000 Submitted:91 Active:9 Progress: time: Wed, 20 Mar 2013 19:35:23 +0000 Submitted:91 Active:8 Stage out:1 Progress: time: Wed, 20 Mar 2013 19:35:24 +0000 Stage in:1 Submitted:82 Active:8 Finished successfully:9 Progress: time: Wed, 20 Mar 2013 19:35:41 +0000 Submitted:82 Active:9 Finished successfully:9 Progress: time: Wed, 20 Mar 2013 19:35:53 +0000 Submitted:82 Active:8 Stage out:1 Finished successfully:9 Progress: time: Wed, 20 Mar 2013 19:35:54 +0000 Stage in:4 Submitted:73 Active:5 Finished successfully:18 Progress: time: Wed, 20 Mar 2013 19:36:11 +0000 Submitted:73 Active:9 Finished successfully:18 Progress: time: Wed, 20 Mar 2013 19:36:23 +0000 Submitted:73 Active:8 Stage out:1 Finished successfully:18 Progress: time: Wed, 20 Mar 2013 19:36:24 +0000 Stage in:2 Submitted:65 Active:6 Stage out:1 Finished successfully:26 Progress: time: Wed, 20 Mar 2013 19:36:41 +0000 Submitted:64 Active:9 Finished successfully:27 Progress: time: Wed, 20 Mar 2013 19:36:54 +0000 Submitted:64 Active:8 Stage out:1 Finished successfully:27 Progress: time: Wed, 20 Mar 2013 19:36:55 +0000 Stage in:2 Submitted:57 Active:7 Finished successfully:34 Channels: {/C=US/O=JavaCoG/OU=AutoCA/CN=User@https://128.135.158.243:39638=MetaChannel[service-54668] -> BufferingChannel, null@id://u759f2980-13d894a4539--8000-u-7a1334c4-13d894a4457--8000S=MetaChannel[service-54668] -> BufferingChannel, null@https://128.135.158.243:39638=MetaChannel[https://128.135.158.243:39638] -> GSSCChannel-https://128.135.158.243:39638(2)[https://128.135.158.243:39638], null@id://u-7a1334c4-13d894a4457--7fff-u759f2980-13d894a4539--7fffC=MetaChannel[https://128.135.158.243:39638] -> GSSCChannel-https://128.135.158.243:39638(2)[https://128.135.158.243:39638]} Context: service-52627 Meta context: service-54668 Channels: {/C=US/O=JavaCoG/OU=AutoCA/CN=User@https://128.135.158.243:39638=MetaChannel[service-54668] -> BufferingChannel, null@id://u759f2980-13d894a4539--8000-u-7a1334c4-13d894a4457--8000S=MetaChannel[service-54668] -> BufferingChannel, null@https://128.135.158.243:39638=MetaChannel[https://128.135.158.243:39638] -> GSSCChannel-https://128.135.158.243:39638(2)[https://128.135.158.243:39638], null@id://u-7a1334c4-13d894a4457--7fff-u759f2980-13d894a4539--7fffC=MetaChannel[https://128.135.158.243:39638] -> GSSCChannel-https://128.135.158.243:39638(2)[https://128.135.158.243:39638]} Context: service-60906 Meta context: service-54668 Progress: time: Wed, 20 Mar 2013 19:37:06 +0000 Submitted:55 Active:8 Finished successfully:36 Failed but can retry:1 Execution failed: Exception in perl: Arguments: [getlanduse.pl, input/h00v22.rgb] Host: uc3 Directory: modis-20130320-1932-gvob9eo0/jobs/h/perl-ht0mgv6l Caused by: Shutting down worker getLandUse, modis.swift, line 24 [yadunand@midway001 test.uc3]$ cd ../test.beagle/'= > ^C [yadunand@midway001 test.uc3]$ cd ../test.beagle/ [yadunand@midway001 test.beagle]$ ./run + export GLOBUS_HOSTNAME=swift.rcc.uchicago.edu + GLOBUS_HOSTNAME=swift.rcc.uchicago.edu + swift -config cf -sites.file beagle.xml -tc.file tc ../modis.swift -modisdir=input/ Swift 0.94RC4 swift-r6290 cog-r3609 (cog modified locally) RunID: 20130320-1940-lq527v15 Progress: time: Wed, 20 Mar 2013 19:40:16 +0000 Progress: time: Wed, 20 Mar 2013 19:40:30 +0000 Submitting:99 Submitted:1 Execution failed: Exception in perl: Arguments: [getlanduse.pl, input/h00v18.rgb] Host: beagle Directory: modis-20130320-1940-lq527v15/jobs/n/perl-namxgv6l Caused by: Could not submit job Caused by: Could not start coaster service Caused by: Task ended before registration was received. Failed to download bootstrap jar from http://swift.rcc.uchicago.edu:39827 /bin/bash: line 20: /lustre/beagle/yadunand/swiftwork/coaster-bootstrap-11494597470.log: No such file or directory /bin/bash: line 23: /lustre/beagle/yadunand/swiftwork/coaster-bootstrap-11494597470.log: No such file or directory cat: /tmp/11494597470: No such file or directory /bin/bash: line 45: /lustre/beagle/yadunand/swiftwork/coaster-bootstrap-11494597470.log: No such file or directory /bin/bash: line 67: /lustre/beagle/yadunand/swiftwork/coaster-bootstrap-11494597470.log: No such file or directory /bin/bash: line 78: /lustre/beagle/yadunand/swiftwork/coaster-bootstrap-11494597470.log: No such file or directory /bin/bash: line 12: /lustre/beagle/yadunand/swiftwork/coaster-bootstrap-11494597470.log: No such file or directory getLandUse, modis.swift, line 24 [yadunand@midway001 test.beagle]$ cd ../test.uc3 [yadunand@midway001 test.uc3]$ ./run + export GLOBUS_HOSTNAME=swift.rcc.uchicago.edu + GLOBUS_HOSTNAME=swift.rcc.uchicago.edu + swift -config cf -sites.file uc3.xml -tc.file tc ../modis.swift -modisdir=input/ Swift 0.94RC4 swift-r6290 cog-r3609 (cog modified locally) RunID: 20130320-1943-05ebdsyg Progress: time: Wed, 20 Mar 2013 19:43:27 +0000 Progress: time: Wed, 20 Mar 2013 19:43:43 +0000 Submitting:99 Submitted:1 Progress: time: Wed, 20 Mar 2013 19:43:57 +0000 Submitted:100 Progress: time: Wed, 20 Mar 2013 19:44:27 +0000 Submitted:100 Progress: time: Wed, 20 Mar 2013 19:44:44 +0000 Stage in:1 Submitted:99 Progress: time: Wed, 20 Mar 2013 19:44:46 +0000 Stage in:1 Submitted:92 Active:7 Progress: time: Wed, 20 Mar 2013 19:44:57 +0000 Submitted:91 Active:9 Progress: time: Wed, 20 Mar 2013 19:45:14 +0000 Submitted:91 Active:8 Stage out:1 Progress: time: Wed, 20 Mar 2013 19:45:17 +0000 Submitted:84 Active:8 Stage out:1 Finished successfully:7 Progress: time: Wed, 20 Mar 2013 19:45:18 +0000 Stage in:2 Submitted:80 Active:9 Finished successfully:9 Progress: time: Wed, 20 Mar 2013 19:45:19 +0000 Submitted:80 Active:11 Finished successfully:9 Progress: time: Wed, 20 Mar 2013 19:45:27 +0000 Submitted:80 Active:11 Finished successfully:9 Progress: time: Wed, 20 Mar 2013 19:45:45 +0000 Submitted:80 Active:10 Stage out:1 Finished successfully:9 Progress: time: Wed, 20 Mar 2013 19:45:46 +0000 Submitted:73 Active:11 Finished successfully:16 Progress: time: Wed, 20 Mar 2013 19:45:47 +0000 Submitted:73 Active:10 Stage out:1 Finished successfully:16 Progress: time: Wed, 20 Mar 2013 19:45:48 +0000 Stage in:1 Submitted:70 Active:10 Finished successfully:19 Progress: time: Wed, 20 Mar 2013 19:45:50 +0000 Submitted:69 Active:11 Finished successfully:20 Progress: time: Wed, 20 Mar 2013 19:45:57 +0000 Submitted:69 Active:11 Finished successfully:20 Progress: time: Wed, 20 Mar 2013 19:46:15 +0000 Submitted:69 Active:10 Stage out:1 Finished successfully:20 Progress: time: Wed, 20 Mar 2013 19:46:16 +0000 Submitted:62 Active:11 Finished successfully:27 Progress: time: Wed, 20 Mar 2013 19:46:18 +0000 Submitted:62 Active:10 Stage out:1 Finished successfully:27 Progress: time: Wed, 20 Mar 2013 19:46:19 +0000 Submitted:59 Active:11 Finished successfully:30 Progress: time: Wed, 20 Mar 2013 19:46:20 +0000 Submitted:59 Active:10 Stage out:1 Finished successfully:30 Progress: time: Wed, 20 Mar 2013 19:46:22 +0000 Submitted:58 Active:11 Finished successfully:31 Progress: time: Wed, 20 Mar 2013 19:46:27 +0000 Submitted:58 Active:11 Finished successfully:31 Progress: time: Wed, 20 Mar 2013 19:46:46 +0000 Submitted:58 Active:10 Stage out:1 Finished successfully:31 Progress: time: Wed, 20 Mar 2013 19:46:47 +0000 Submitted:51 Active:11 Finished successfully:38 Progress: time: Wed, 20 Mar 2013 19:46:49 +0000 Submitted:51 Active:10 Stage out:1 Finished successfully:38 Progress: time: Wed, 20 Mar 2013 19:46:50 +0000 Submitted:48 Active:11 Finished successfully:41 Progress: time: Wed, 20 Mar 2013 19:46:53 +0000 Submitted:48 Active:10 Stage out:1 Finished successfully:41 Progress: time: Wed, 20 Mar 2013 19:46:54 +0000 Submitted:47 Active:11 Finished successfully:42 Progress: time: Wed, 20 Mar 2013 19:46:57 +0000 Submitted:47 Active:11 Finished successfully:42 Progress: time: Wed, 20 Mar 2013 19:47:16 +0000 Submitted:47 Active:10 Stage out:1 Finished successfully:42 Progress: time: Wed, 20 Mar 2013 19:47:17 +0000 Stage in:1 Submitted:40 Active:10 Stage out:1 Finished successfully:48 Progress: time: Wed, 20 Mar 2013 19:47:19 +0000 Submitted:40 Active:10 Stage out:1 Finished successfully:49 Progress: time: Wed, 20 Mar 2013 19:47:20 +0000 Submitted:37 Active:11 Finished successfully:52 Progress: time: Wed, 20 Mar 2013 19:47:24 +0000 Submitted:37 Active:10 Stage out:1 Finished successfully:52 Progress: time: Wed, 20 Mar 2013 19:47:25 +0000 Submitted:36 Active:11 Finished successfully:53 Progress: time: Wed, 20 Mar 2013 19:47:27 +0000 Submitted:36 Active:11 Finished successfully:53 Progress: time: Wed, 20 Mar 2013 19:47:30 +0000 Stage in:1 Submitted:35 Active:11 Finished successfully:53 Channels: {/C=US/O=JavaCoG/OU=AutoCA/CN=User@https://128.135.158.243:33035=MetaChannel[service-51186] -> BufferingChannel, null@id://u681687c0-13d89541b94--7fff-u33f057b6-13d89541c6d--7fffC=MetaChannel[https://128.135.158.243:33035] -> GSSCChannel-https://128.135.158.243:33035(2)[https://128.135.158.243:33035], null@https://128.135.158.243:33035=MetaChannel[https://128.135.158.243:33035] -> GSSCChannel-https://128.135.158.243:33035(2)[https://128.135.158.243:33035], null@id://u33f057b6-13d89541c6d--8000-u681687c0-13d89541b94--8000S=MetaChannel[service-51186] -> BufferingChannel} Context: service-48639 Meta context: service-51186 Progress: time: Wed, 20 Mar 2013 19:47:47 +0000 Submitted:35 Active:11 Stage out:1 Finished successfully:53 Channels: {/C=US/O=JavaCoG/OU=AutoCA/CN=User@https://128.135.158.243:33035=MetaChannel[service-51186] -> BufferingChannel, null@id://u681687c0-13d89541b94--7fff-u33f057b6-13d89541c6d--7fffC=MetaChannel[https://128.135.158.243:33035] -> GSSCChannel-https://128.135.158.243:33035(2)[https://128.135.158.243:33035], null@https://128.135.158.243:33035=MetaChannel[https://128.135.158.243:33035] -> GSSCChannel-https://128.135.158.243:33035(2)[https://128.135.158.243:33035], null@id://u33f057b6-13d89541c6d--8000-u681687c0-13d89541b94--8000S=MetaChannel[service-51186] -> BufferingChannel} Context: service-43233 Meta context: service-51186 Progress: time: Wed, 20 Mar 2013 19:47:48 +0000 Submitted:29 Active:12 Finished successfully:59 Progress: time: Wed, 20 Mar 2013 19:47:50 +0000 Submitted:28 Active:11 Stage out:1 Finished successfully:60 Progress: time: Wed, 20 Mar 2013 19:47:51 +0000 Submitted:25 Active:12 Finished successfully:63 Execution failed: Exception in perl: Arguments: [getlanduse.pl, input/h00v54.rgb] Host: uc3 Directory: modis-20130320-1943-05ebdsyg/jobs/u/perl-ux22hv6l Caused by: Shutting down worker getLandUse, modis.swift, line 24 [yadunand@midway001 test.uc3]$