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sites.template.xml is producing this error, as soon as I remove the file from the directory, the error goes away as well.<div>These are the contents of such file:</div><div><br><div><div><config></div><div> <pool handle="localhost"></div><div> <filesystem provider="local" /></div><div> <execution provider="coaster" jobmanager="local:local"/></div><div> <profile namespace="globus" key="internalHostname">127.0.0.1</profile></div><div> <profile namespace="karajan" key="jobthrottle">1000</profile></div><div> <profile namespace="karajan" key="initialScore">10000</profile></div><div> <profile namespace="globus" key="jobsPerNode">4</profile></div><div> <profile namespace="globus" key="slots">8</profile></div><div> <profile namespace="globus" key="maxTime">1000</profile></div><div> <profile namespace="globus" key="nodeGranularity">1</profile></div><div> <profile namespace="globus" key="maxNodes">4</profile></div><div> <workdirectory>/tmp</workdirectory></div><div> </pool></div><div></config></div><div><br></div><div>-Alberto</div><div><br></div><div><div><div>> Subject: Re: [Swift-devel] Swift unresponsive while using local provider.<br>> From: hategan@mcs.anl.gov<br>> To: davidkelly999@gmail.com<br>> Date: Fri, 17 Jun 2011 12:56:25 -0700<br>> CC: swift-devel@ci.uchicago.edu<br>> <br>> do "jstack -l <pid_of_swift_java_process>" whenever it happens and send<br>> the output.<br>> <br>> <br>> <br>> On Fri, 2011-06-17 at 14:48 -0500, David Kelly wrote:<br>> > I saw similar things on my laptop (4 gb ram) this weekend when I was<br>> > testing the galaxy demo scripts using the local provider. I was using<br>> > trunk. In the output I would see things like "no activity for 10s" and<br>> > it just would sit there and do nothing until I manually killed it. But<br>> > most of the time it would work fine. I wrote a little shell script<br>> > that would repeatedly run it until it hung. Then I was talking to Jon<br>> > about this and he saw something similar with his montage work. He<br>> > thought it might be related to a configuration issue - that either<br>> > wrapper.parameter.mode=files or status.mode=provider should be set.<br>> > <br>> > I can send my scripts as well if you need some help in tracking this<br>> > down.<br>> > <br>> > David<br>> > <br>> > On Fri, Jun 17, 2011 at 2:38 PM, Michael Wilde <wilde@mcs.anl.gov><br>> > wrote:<br>> > Alberto, how long are you letting it run for, and under what<br>> > environment? if you are running on your laptop, how much RAM<br>> > do you have? Its possible that you are seeing paging delays<br>> > if you are running the Swift Java app with too little memory.<br>> > <br>> > <br>> > Also, are you running trunk or 0.92.1? You should compare the<br>> > two.<br>> > <br>> > <br>> > Its *possible* that this simple test is hanging under recent<br>> > trunk mods, but its more likely that this is some kind of<br>> > resource shortage.<br>> > <br>> > <br>> > Can you run this on one of the Swift lab machines bridled or<br>> > communcado, or better yet on the MCS compute servers, or a<br>> > PADS worker node (which you can get with qsub -I on pads)?<br>> > <br>> > <br>> > Look at Swift under the "top" command to see if Swift is<br>> > running and slow, or is hung.<br>> > <br>> > <br>> > Stop by and we can discuss in more detail.<br>> > <br>> > <br>> > - Mike<br>> > <br>> > <br>> > <br>> > ______________________________________________________________<br>> > <br>> > When I run the following SwiftScript using suite.sh,<br>> > the report shows an odd behavior, most of the time it<br>> > times out, but once in a while it passes, however this<br>> > outcome is completely random, since sometimes that<br>> > test has passed 3 times in a row, and all of the<br>> > sudden it fails.<br>> > This is my script:<br>> > <br>> > <br>> > type messagefile;<br>> > <br>> > <br>> > app (messagefile t) greeting (string s[]) {<br>> > echo s[0] s[1] s[2] stdout=@filename(t);<br>> > }<br>> > <br>> > <br>> > messagefile outfile <"q5out.txt">;<br>> > <br>> > <br>> > string words[] = ["how","are","you"];<br>> > <br>> > <br>> > outfile = greeting(words);<br>> > <br>> > <br>> > <br>> > <br>> > <br>> > <br>> > <br>> > Swift.properties contents:<br>> > <br>> > <br>> > $ cat swift.properties <br>> > wrapperlog.always.transfer=true<br>> > sitedir.keep=true<br>> > execution.retries=0<br>> > lazy.errors=false<br>> > status.mode=provider<br>> > use.provider.staging=false<br>> > provider.staging.pin.swiftfiles=false<br>> > <br>> > <br>> > Sites.template.xml contents:<br>> > <br>> > <br>> > $ cat sites.template.xml <br>> > <config><br>> > <pool handle="localhost"><br>> > <filesystem provider="local" /><br>> > <execution provider="coaster"<br>> > jobmanager="local:local"/><br>> > <profile namespace="globus"<br>> > key="internalHostname">127.0.0.1</profile><br>> > <profile namespace="karajan"<br>> > key="jobthrottle">1000</profile><br>> > <profile namespace="karajan"<br>> > key="initialScore">10000</profile><br>> > <profile namespace="globus"<br>> > key="jobsPerNode">4</profile><br>> > <profile namespace="globus"<br>> > key="slots">8</profile><br>> > <profile namespace="globus"<br>> > key="maxTime">1000</profile><br>> > <profile namespace="globus"<br>> > key="nodeGranularity">1</profile><br>> > <profile namespace="globus"<br>> > key="maxNodes">4</profile><br>> > <workdirectory>/tmp</workdirectory><br>> > </pool><br>> > </config><br>> > <br>> > <br>> > -Alberto<br>> > <br>> > <br>> > _______________________________________________<br>> > Swift-devel mailing list<br>> > Swift-devel@ci.uchicago.edu<br>> > http://mail.ci.uchicago.edu/mailman/listinfo/swift-devel<br>> > <br>> > <br>> > <br>> > -- <br>> > Michael Wilde<br>> > Computation Institute, University of Chicago<br>> > Mathematics and Computer Science Division<br>> > Argonne National Laboratory<br>> > <br>> > <br>> > <br>> > _______________________________________________<br>> > Swift-devel mailing list<br>> > Swift-devel@ci.uchicago.edu<br>> > http://mail.ci.uchicago.edu/mailman/listinfo/swift-devel<br>> > <br>> > <br>> > _______________________________________________<br>> > Swift-devel mailing list<br>> > Swift-devel@ci.uchicago.edu<br>> > http://mail.ci.uchicago.edu/mailman/listinfo/swift-devel<br>> <br>> <br>> _______________________________________________<br>> Swift-devel mailing list<br>> Swift-devel@ci.uchicago.edu<br>> http://mail.ci.uchicago.edu/mailman/listinfo/swift-devel<br></div></div></div></div></div> </div></body>
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