[Swift-commit] r2645 - SwiftApps/SIDGrid/swift/projects/andric/peakfit_pilots/PK2/PK2surfaces/surfaceData

[noreply at svn.ci.uchicago.edu]

Author: andric
Date: 2009-03-06 02:10:00 -0600 (Fri, 06 Mar 2009)
New Revision: 2645

Modified:
   SwiftApps/SIDGrid/swift/projects/andric/peakfit_pilots/PK2/PK2surfaces/surfaceData/Vol2Surf.swift
Log:
Projecting the time series to surface

Modified: SwiftApps/SIDGrid/swift/projects/andric/peakfit_pilots/PK2/PK2surfaces/surfaceData/Vol2Surf.swift
===================================================================
--- SwiftApps/SIDGrid/swift/projects/andric/peakfit_pilots/PK2/PK2surfaces/surfaceData/Vol2Surf.swift	2009-03-06 07:23:20 UTC (rev 2644)
+++ SwiftApps/SIDGrid/swift/projects/andric/peakfit_pilots/PK2/PK2surfaces/surfaceData/Vol2Surf.swift	2009-03-06 08:10:00 UTC (rev 2645)
@@ -17,18 +17,18 @@
 string declarelist[] = ["PK2"];
 string mapFunctions[] = ["ave"];
 string hemis[] = ["lh","rh"];
-string conditions[] = ["DeconvResults"];
+string conditions[] = ["TScat_Dtrnd.nrmlzdPerChng"];
 
 foreach subject in declarelist{
     foreach map in mapFunctions{
         foreach h in hemis{
             foreach cc in conditions{
-                string baseDir = @strcat("/disks/ci-gpfs/fmri/cnari/swift/projects/andric/peakfitTESTS/",subject,"/");
+                string baseDir = @strcat("/disks/ci-gpfs/fmri/cnari/swift/projects/andric/peakfit_pilots/",subject,"/");
                 file spec_file<single_file_mapper; file=@strcat(baseDir,subject,"surfaces/SUMA/",subject,"_",h,".spec")>;
                 file smoothwm<single_file_mapper; file=@strcat(baseDir,subject,"surfaces/SUMA/",h,".smoothwm.asc")>;
                 file pial<single_file_mapper; file=@strcat(baseDir,subject,"surfaces/SUMA/",h,".pial.asc")>;
                 AFNI_obj surfvol<simple_mapper; location=@strcat(baseDir,subject,"surfaces/SUMA"), prefix=@strcat(subject,"_SurfVol_Alnd_Exp+orig.")>;
-                AFNI_obj grid_parent<simple_mapper; location=@strcat(baseDir,"preprocessing"), prefix=@strcat(cc,"_",subject,"+orig.")>;
+                AFNI_obj grid_parent<simple_mapper; location=@strcat(baseDir,"preprocessing"), prefix=@strcat(cc,".",subject,"+orig.")>;
                 file output1D<single_file_mapper; file=@strcat(baseDir,subject,"surfaces/surfaceData/",subject,"_",h,"_",cc,"map",map,".1D")>;
                 output1D = AFNI_Vol2Surf(spec_file, smoothwm, pial, map, surfvol, grid_parent);
             }