<div dir="ltr">As a start, please send configure.log<div><br></div><div> Thanks,</div><div><br></div><div> Matt</div></div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Fri, Aug 9, 2024 at 1:17 PM Vanella, Marcos (Fed) via petsc-users <<a href="mailto:petsc-users@mcs.anl.gov">petsc-users@mcs.anl.gov</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex"><div class="msg6870436991589119443">
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Hi All, I keep running into this issue when trying to configure PETSc downloading HYPRE in Polaris.</div>
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My modules are:</div>
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export <b>MPICH_GPU_SUPPORT_ENABLED</b>=1</div>
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module use /soft/modulefiles</div>
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module load spack-pe-base cmake</div>
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module unload darshan</div>
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module load cudatoolkit-standalone PrgEnv-gnu cray-libsci</div>
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and my configure line is:</div>
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$./configure COPTFLAGS="-O2" CXXOPTFLAGS="-O2" FOPTFLAGS="-O2" FCOPTFLAGS="-O2" CUDAOPTFLAGS="-O2" --with-debugging=1 --download-suitesparse --download-hypre --with-cuda --with-cc=cc --with-cxx=CC --with-fc=ftn --with-cudac=nvcc --with-cuda-arch=80</div>
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<br>
</div>
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What I see in the configure phase is:</div>
<div style="line-height:normal;margin:0px;font-family:"Courier New",monospace;font-size:12pt;color:rgb(0,0,0)">
=============================================================================================</div>
<div style="line-height:normal;margin:0px;font-family:"Courier New",monospace;font-size:12pt;color:rgb(0,0,0)">
Configuring PETSc to compile on your system</div>
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=============================================================================================</div>
<div style="line-height:normal;margin:0px;font-family:"Courier New",monospace;font-size:12pt;color:rgb(0,0,0)">
=============================================================================================</div>
<div style="line-height:normal;margin:0px;font-family:"Courier New",monospace;font-size:12pt;color:rgb(0,0,0)">
Trying to download <a href="https://urldefense.us/v3/__https://bitbucket.org/petsc/pkg-sowing.git__;!!G_uCfscf7eWS!cmVCEe9Yo9XY7yJT97YkbQmjoCgOuxhiJ2FQxtDUKX1EeWJlKWt0pLawxoHeUS0ZDgSfwCHAoJNUjc5uQW3gQdHH9OXszklO$" target="_blank">https://bitbucket.org/petsc/pkg-sowing.git</a> for SOWING</div>
<div style="line-height:normal;margin:0px;font-family:"Courier New",monospace;font-size:12pt;color:rgb(0,0,0)">
=============================================================================================</div>
<div style="line-height:normal;margin:0px;font-family:"Courier New",monospace;font-size:12pt;color:rgb(0,0,0)">
=============================================================================================</div>
<div style="line-height:normal;margin:0px;font-family:"Courier New",monospace;font-size:12pt;color:rgb(0,0,0)">
Running configure on SOWING; this may take several minutes</div>
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=============================================================================================</div>
<div style="line-height:normal;margin:0px;font-family:"Courier New",monospace;font-size:12pt;color:rgb(0,0,0)">
=============================================================================================</div>
<div style="line-height:normal;margin:0px;font-family:"Courier New",monospace;font-size:12pt;color:rgb(0,0,0)">
Running make on SOWING; this may take several minutes</div>
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=============================================================================================</div>
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=============================================================================================</div>
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Running make install on SOWING; this may take several minutes</div>
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=============================================================================================</div>
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=============================================================================================</div>
<div style="line-height:normal;margin:0px;font-family:"Courier New",monospace;font-size:12pt;color:rgb(0,0,0)">
Running arch-polaris-dbg/bin/bfort to generate Fortran stubs</div>
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=============================================================================================</div>
<div style="line-height:normal;margin:0px;font-family:"Courier New",monospace;font-size:12pt;color:rgb(0,0,0)">
=============================================================================================</div>
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Trying to download <a href="https://urldefense.us/v3/__https://github.com/DrTimothyAldenDavis/SuiteSparse__;!!G_uCfscf7eWS!cmVCEe9Yo9XY7yJT97YkbQmjoCgOuxhiJ2FQxtDUKX1EeWJlKWt0pLawxoHeUS0ZDgSfwCHAoJNUjc5uQW3gQdHH9Ho5-hpl$" target="_blank">https://github.com/DrTimothyAldenDavis/SuiteSparse</a> for SUITESPARSE</div>
<div style="line-height:normal;margin:0px;font-family:"Courier New",monospace;font-size:12pt;color:rgb(0,0,0)">
=============================================================================================</div>
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=============================================================================================</div>
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Configuring SUITESPARSE with CMake; this may take several minutes</div>
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=============================================================================================</div>
<div style="line-height:normal;margin:0px;font-family:"Courier New",monospace;font-size:12pt;color:rgb(0,0,0)">
=============================================================================================</div>
<div style="line-height:normal;margin:0px;font-family:"Courier New",monospace;font-size:12pt;color:rgb(0,0,0)">
Compiling and installing SUITESPARSE; this may take several minutes</div>
<div style="line-height:normal;margin:0px;font-family:"Courier New",monospace;font-size:12pt;color:rgb(0,0,0)">
=============================================================================================</div>
<div style="line-height:normal;margin:0px;font-family:"Courier New",monospace;font-size:12pt;color:rgb(0,0,0)">
=============================================================================================</div>
<div style="line-height:normal;margin:0px;font-family:"Courier New",monospace;font-size:12pt;color:rgb(0,0,0)">
Trying to download <a href="https://urldefense.us/v3/__https://github.com/hypre-space/hypre__;!!G_uCfscf7eWS!cmVCEe9Yo9XY7yJT97YkbQmjoCgOuxhiJ2FQxtDUKX1EeWJlKWt0pLawxoHeUS0ZDgSfwCHAoJNUjc5uQW3gQdHH9JxTYrQ0$" target="_blank">https://github.com/hypre-space/hypre</a> for HYPRE</div>
<div style="line-height:normal;margin:0px;font-family:"Courier New",monospace;font-size:12pt;color:rgb(0,0,0)">
=============================================================================================</div>
<div style="line-height:normal;margin:0px;font-family:"Courier New",monospace;font-size:12pt;color:rgb(0,0,0)">
=============================================================================================</div>
<div style="line-height:normal;margin:0px;font-family:"Courier New",monospace;font-size:12pt;color:rgb(0,0,0)">
Running configure on HYPRE; this may take several minutes</div>
<div style="line-height:normal;margin:0px;font-family:"Courier New",monospace;font-size:12pt;color:rgb(0,0,0)">
=============================================================================================</div>
<div style="line-height:normal;margin:0px;font-family:"Courier New",monospace;font-size:12pt;color:rgb(0,0,0)">
=============================================================================================</div>
<div style="line-height:normal;margin:0px;font-family:"Courier New",monospace;font-size:12pt;color:rgb(0,0,0)">
Running make on HYPRE; this may take several minutes</div>
<div style="line-height:normal;margin:0px;font-family:"Courier New",monospace;font-size:12pt;color:rgb(0,0,0)">
=============================================================================================</div>
<div style="line-height:normal;margin:0px;min-height:20px;font-family:"Courier New",monospace;font-size:12pt;color:rgb(0,0,0)">
<br>
</div>
<div style="line-height:normal;margin:0px;font-family:"Courier New",monospace;font-size:12pt;color:rgb(0,0,0)">
*********************************************************************************************</div>
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UNABLE to CONFIGURE with GIVEN OPTIONS (see configure.log for details):</div>
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---------------------------------------------------------------------------------------------</div>
<div style="line-height:normal;margin:0px;font-family:"Courier New",monospace;font-size:12pt;color:rgb(0,0,0)">
Error running make; make install on HYPRE</div>
<div style="line-height:normal;margin:0px;font-family:"Courier New",monospace;font-size:12pt;color:rgb(0,0,0)">
*********************************************************************************************</div>
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<br>
the configure.log file ends with:</div>
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<br>
</div>
<div style="line-height:normal;margin:0px;font-family:"Courier New",monospace;font-size:12pt;color:rgb(0,0,0)">
*********************************************************************************************</div>
<div style="line-height:normal;margin:0px;font-family:"Courier New",monospace;font-size:12pt;color:rgb(0,0,0)">
UNABLE to CONFIGURE with GIVEN OPTIONS (see configure.log for details):</div>
<div style="line-height:normal;margin:0px;font-family:"Courier New",monospace;font-size:12pt;color:rgb(0,0,0)">
---------------------------------------------------------------------------------------------</div>
<div style="line-height:normal;margin:0px;font-family:"Courier New",monospace;font-size:12pt;color:rgb(0,0,0)">
Error running make; make install on HYPRE</div>
<div style="line-height:normal;margin:0px;font-family:"Courier New",monospace;font-size:12pt;color:rgb(0,0,0)">
*********************************************************************************************</div>
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File "/home/mnv/Software/petsc/config/configure.py", line 462, in petsc_configure</div>
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framework.configure(out = sys.stdout)</div>
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File "/home/mnv/Software/petsc/config/BuildSystem/config/framework.py", line 1455, in configure</div>
<div style="line-height:normal;margin:0px;font-family:"Courier New",monospace;font-size:12pt;color:rgb(0,0,0)">
self.processChildren()</div>
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File "/home/mnv/Software/petsc/config/BuildSystem/config/framework.py", line 1443, in processChildren</div>
<div style="line-height:normal;margin:0px;font-family:"Courier New",monospace;font-size:12pt;color:rgb(0,0,0)">
self.serialEvaluation(self.childGraph)</div>
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File "/home/mnv/Software/petsc/config/BuildSystem/config/framework.py", line 1418, in serialEvaluation</div>
<div style="line-height:normal;margin:0px;font-family:"Courier New",monospace;font-size:12pt;color:rgb(0,0,0)">
child.configure()</div>
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File "/home/mnv/Software/petsc/config/BuildSystem/config/package.py", line 1354, in configure</div>
<div style="line-height:normal;margin:0px;font-family:"Courier New",monospace;font-size:12pt;color:rgb(0,0,0)">
self.executeTest(self.configureLibrary)</div>
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File "/home/mnv/Software/petsc/config/BuildSystem/config/base.py", line 138, in executeTest</div>
<div style="line-height:normal;margin:0px;font-family:"Courier New",monospace;font-size:12pt;color:rgb(0,0,0)">
ret = test(*args,**kargs)</div>
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File "/home/mnv/Software/petsc/config/BuildSystem/config/packages/hypre.py", line 199, in configureLibrary</div>
<div style="line-height:normal;margin:0px;font-family:"Courier New",monospace;font-size:12pt;color:rgb(0,0,0)">
config.package.Package.configureLibrary(self)</div>
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File "/home/mnv/Software/petsc/config/BuildSystem/config/package.py", line 1041, in configureLibrary</div>
<div style="line-height:normal;margin:0px;font-family:"Courier New",monospace;font-size:12pt;color:rgb(0,0,0)">
for location, directory, lib, incl in self.generateGuesses():</div>
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File "/home/mnv/Software/petsc/config/BuildSystem/config/package.py", line 609, in generateGuesses</div>
<div style="line-height:normal;margin:0px;font-family:"Courier New",monospace;font-size:12pt;color:rgb(0,0,0)">
d = self.checkDownload()</div>
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File "/home/mnv/Software/petsc/config/BuildSystem/config/package.py", line 743, in checkDownload</div>
<div style="line-height:normal;margin:0px;font-family:"Courier New",monospace;font-size:12pt;color:rgb(0,0,0)">
return self.getInstallDir()</div>
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File "/home/mnv/Software/petsc/config/BuildSystem/config/package.py", line 545, in getInstallDir</div>
<div style="line-height:normal;margin:0px;font-family:"Courier New",monospace;font-size:12pt;color:rgb(0,0,0)">
installDir = self.Install()</div>
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File "/home/mnv/Software/petsc/config/BuildSystem/config/package.py", line 1892, in Install</div>
<div style="line-height:normal;margin:0px;font-family:"Courier New",monospace;font-size:12pt;color:rgb(0,0,0)">
raise RuntimeError('Error running make; make install on '+self.PACKAGE)</div>
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================================================================================</div>
<div style="line-height:normal;margin:0px;font-family:"Courier New",monospace;font-size:12pt;color:rgb(0,0,0)">
Finishing configure run at Fri, 09 Aug 2024 15:44:54 +0000</div>
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================================================================================</div>
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<br>
</div>
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Any help in debugging this is much appreciated. I can provide the whole configure.log file if needed.<br>
Thank you for your time,</div>
<div style="font-family:Aptos,Aptos_EmbeddedFont,Aptos_MSFontService,Calibri,Helvetica,sans-serif;font-size:12pt;color:rgb(0,0,0)">
Marcos</div>
</div>
</div></blockquote></div><br clear="all"><div><br></div><span class="gmail_signature_prefix">-- </span><br><div dir="ltr" class="gmail_signature"><div dir="ltr"><div><div dir="ltr"><div><div dir="ltr"><div>What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead.<br>-- Norbert Wiener</div><div><br></div><div><a href="https://urldefense.us/v3/__http://www.cse.buffalo.edu/*knepley/__;fg!!G_uCfscf7eWS!bC2nF0niuYrmvBqOKJhC2c7ynXepezhMCen7e9RqnIO_bj8qEvum1TAPesC1XjzU0AEgkVpR4B20xZJqvPeJ$" target="_blank">https://www.cse.buffalo.edu/~knepley/</a><br></div></div></div></div></div></div></div>