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It is unlikely, though, of course, possible that the problem comes from the Fortran code. Is there any way to ./configure/build the code in the same way on another system that is easier to debug for? Or with less options on Frontier? (For example
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<meta http-equiv="content-type" content="text/html; charset=utf-8"></head><body style="overflow-wrap: break-word; -webkit-nbsp-mode: space; line-break: after-white-space;"><div><br></div> It is unlikely, though, of course, possible that the problem comes from the Fortran code. Is there any way to ./configure/build the code in the same way on another system that is easier to debug for? Or with less options on Frontier? (For example without the optimization flags and the extra -lxpmem etc?) and see if it still crashes in the same way? Frontier is very flaky.<div><br></div><div> Barry</div><div><br id="lineBreakAtBeginningOfMessage"><div><br><blockquote type="cite"><div>On Jul 19, 2024, at 3:37 PM, Vanella, Marcos (Fed) <marcos.vanella@nist.gov> wrote:</div><br class="Apple-interchange-newline"><div><meta charset="UTF-8"><div class="elementToProof" style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; font-family: Aptos, Aptos_EmbeddedFont, Aptos_MSFontService, Calibri, Helvetica, sans-serif; font-size: 12pt;">Hi Barry, with the changes in place for my fortran calls I'm now picking up the following error running PC + gamg preconditioner and mpiaijkokkos, kokkos vec:</div><div class="elementToProof" style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; font-family: Aptos, Aptos_EmbeddedFont, Aptos_MSFontService, Calibri, Helvetica, sans-serif; font-size: 12pt;"><br></div><div class="elementToProof" style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; line-height: normal; margin: 0px; font-family: Aptos, Aptos_EmbeddedFont, Aptos_MSFontService, Calibri, Helvetica, sans-serif; font-size: 12pt;">[0]PETSC ERROR: ------------------------------------------------------------------------</div><div style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; line-height: normal; margin: 0px; font-family: Aptos, Aptos_EmbeddedFont, Aptos_MSFontService, Calibri, Helvetica, sans-serif; font-size: 12pt;">[0]PETSC ERROR: Caught signal number 7 BUS: Bus Error, possibly illegal memory access</div><div style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; line-height: normal; margin: 0px; font-family: Aptos, Aptos_EmbeddedFont, Aptos_MSFontService, Calibri, Helvetica, sans-serif; font-size: 12pt;">[0]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger</div><div style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; line-height: normal; margin: 0px; font-family: Aptos, Aptos_EmbeddedFont, Aptos_MSFontService, Calibri, Helvetica, sans-serif; font-size: 12pt;">[0]PETSC ERROR: or see<span class="Apple-converted-space"> </span><a href="https://urldefense.us/v3/__https://petsc.org/release/faq/*valgrind__;Iw!!G_uCfscf7eWS!eN32mKT-DWEElShhgK8OZIc3vOOsf_Mdz0zToUJkoNBD1nYonVt8s8ERpHIlut7cq7wLaBIV8INywSoF5L-ds58$">https://petsc.org/release/faq/#valgrind</a><span class="Apple-converted-space"> </span>and<span class="Apple-converted-space"> </span><a href="https://urldefense.us/v3/__https://petsc.org/release/faq/__;!!G_uCfscf7eWS!eN32mKT-DWEElShhgK8OZIc3vOOsf_Mdz0zToUJkoNBD1nYonVt8s8ERpHIlut7cq7wLaBIV8INywSoFnOnytYM$">https://petsc.org/release/faq/</a></div><div style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; line-height: normal; margin: 0px; font-family: Aptos, Aptos_EmbeddedFont, Aptos_MSFontService, Calibri, Helvetica, sans-serif; font-size: 12pt;">[0]PETSC ERROR: --------------------- Stack Frames ------------------------------------</div><div style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; line-height: normal; margin: 0px; font-family: Aptos, Aptos_EmbeddedFont, Aptos_MSFontService, Calibri, Helvetica, sans-serif; font-size: 12pt;">[0]PETSC ERROR: The line numbers in the error traceback are not always exact.</div><div style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; line-height: normal; margin: 0px; font-family: Aptos, Aptos_EmbeddedFont, Aptos_MSFontService, Calibri, Helvetica, sans-serif; font-size: 12pt;">[0]PETSC ERROR: #1 MPI function</div><div style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; line-height: normal; margin: 0px; font-family: Aptos, Aptos_EmbeddedFont, Aptos_MSFontService, Calibri, Helvetica, sans-serif; font-size: 12pt;">[0]PETSC ERROR: #2 PetscSFLinkFinishCommunication_Default() at /autofs/nccs-svm1_home1/vanellam/Software/petsc/src/vec/is/sf/impls/basic/sfmpi.c:13</div><div style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; line-height: normal; margin: 0px; font-family: Aptos, Aptos_EmbeddedFont, Aptos_MSFontService, Calibri, Helvetica, sans-serif; font-size: 12pt;">[0]PETSC ERROR: #3 PetscSFLinkFinishCommunication() at /autofs/nccs-svm1_home1/vanellam/Software/petsc/include/../src/vec/is/sf/impls/basic/sfpack.h:291</div><div style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; line-height: normal; margin: 0px; font-family: Aptos, Aptos_EmbeddedFont, Aptos_MSFontService, Calibri, Helvetica, sans-serif; font-size: 12pt;">[0]PETSC ERROR: #4 PetscSFBcastEnd_Basic() at /autofs/nccs-svm1_home1/vanellam/Software/petsc/src/vec/is/sf/impls/basic/sfbasic.c:373</div><div style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; line-height: normal; margin: 0px; font-family: Aptos, Aptos_EmbeddedFont, Aptos_MSFontService, Calibri, Helvetica, sans-serif; font-size: 12pt;">[0]PETSC ERROR: #5 PetscSFBcastEnd() at /autofs/nccs-svm1_home1/vanellam/Software/petsc/src/vec/is/sf/interface/sf.c:1540</div><div style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; line-height: normal; margin: 0px; font-family: Aptos, Aptos_EmbeddedFont, Aptos_MSFontService, Calibri, Helvetica, sans-serif; font-size: 12pt;">[0]PETSC ERROR: #6 VecScatterEnd_Internal() at /autofs/nccs-svm1_home1/vanellam/Software/petsc/src/vec/is/sf/interface/vscat.c:95</div><div style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; line-height: normal; margin: 0px; font-family: Aptos, Aptos_EmbeddedFont, Aptos_MSFontService, Calibri, Helvetica, sans-serif; font-size: 12pt;">[0]PETSC ERROR: #7 VecScatterEnd() at /autofs/nccs-svm1_home1/vanellam/Software/petsc/src/vec/is/sf/interface/vscat.c:1352</div><div style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; line-height: normal; margin: 0px; font-family: Aptos, Aptos_EmbeddedFont, Aptos_MSFontService, Calibri, Helvetica, sans-serif; font-size: 12pt;">[0]PETSC ERROR: #8 MatDiagonalScale_MPIAIJ() at /autofs/nccs-svm1_home1/vanellam/Software/petsc/src/mat/impls/aij/mpi/mpiaij.c:1990</div><div style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; line-height: normal; margin: 0px; font-family: Aptos, Aptos_EmbeddedFont, Aptos_MSFontService, Calibri, Helvetica, sans-serif; font-size: 12pt;">[0]PETSC ERROR: #9 MatDiagonalScale() at /autofs/nccs-svm1_home1/vanellam/Software/petsc/src/mat/interface/matrix.c:5691</div><div style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; line-height: normal; margin: 0px; font-family: Aptos, Aptos_EmbeddedFont, Aptos_MSFontService, Calibri, Helvetica, sans-serif; font-size: 12pt;">[0]PETSC ERROR: #10 MatCreateGraph_Simple_AIJ() at /autofs/nccs-svm1_home1/vanellam/Software/petsc/src/mat/impls/aij/mpi/mpiaij.c:8026</div><div style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; line-height: normal; margin: 0px; font-family: Aptos, Aptos_EmbeddedFont, Aptos_MSFontService, Calibri, Helvetica, sans-serif; font-size: 12pt;">[0]PETSC ERROR: #11 MatCreateGraph() at /autofs/nccs-svm1_home1/vanellam/Software/petsc/src/mat/interface/matrix.c:11426</div><div style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; line-height: normal; margin: 0px; font-family: Aptos, Aptos_EmbeddedFont, Aptos_MSFontService, Calibri, Helvetica, sans-serif; font-size: 12pt;">[0]PETSC ERROR: #12 PCGAMGCreateGraph_AGG() at /autofs/nccs-svm1_home1/vanellam/Software/petsc/src/ksp/pc/impls/gamg/agg.c:663</div><div style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; line-height: normal; margin: 0px; font-family: Aptos, Aptos_EmbeddedFont, Aptos_MSFontService, Calibri, Helvetica, sans-serif; font-size: 12pt;">[0]PETSC ERROR: #13 PCGAMGCreateGraph() at /autofs/nccs-svm1_home1/vanellam/Software/petsc/src/ksp/pc/impls/gamg/gamg.c:2041</div><div style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; line-height: normal; margin: 0px; font-family: Aptos, Aptos_EmbeddedFont, Aptos_MSFontService, Calibri, Helvetica, sans-serif; font-size: 12pt;">[0]PETSC ERROR: #14 PCSetUp_GAMG() at /autofs/nccs-svm1_home1/vanellam/Software/petsc/src/ksp/pc/impls/gamg/gamg.c:695</div><div style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; line-height: normal; margin: 0px; font-family: Aptos, Aptos_EmbeddedFont, Aptos_MSFontService, Calibri, Helvetica, sans-serif; font-size: 12pt;">[0]PETSC ERROR: #15 PCSetUp() at /autofs/nccs-svm1_home1/vanellam/Software/petsc/src/ksp/pc/interface/precon.c:1077</div><div style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; line-height: normal; margin: 0px; font-family: Aptos, Aptos_EmbeddedFont, Aptos_MSFontService, Calibri, Helvetica, sans-serif; font-size: 12pt;">[0]PETSC ERROR: #16 KSPSetUp() at /autofs/nccs-svm1_home1/vanellam/Software/petsc/src/ksp/ksp/interface/itfunc.c:415</div><div style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; line-height: normal; margin: 0px; font-family: Aptos, Aptos_EmbeddedFont, Aptos_MSFontService, Calibri, Helvetica, sans-serif; font-size: 12pt;">[0]PETSC ERROR: #17 KSPSolve_Private() at /autofs/nccs-svm1_home1/vanellam/Software/petsc/src/ksp/ksp/interface/itfunc.c:826</div><div style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; line-height: normal; margin: 0px; font-family: Aptos, Aptos_EmbeddedFont, Aptos_MSFontService, Calibri, Helvetica, sans-serif; font-size: 12pt;">[0]PETSC ERROR: #18 KSPSolve() at /autofs/nccs-svm1_home1/vanellam/Software/petsc/src/ksp/ksp/interface/itfunc.c:1073</div><div style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; line-height: normal; margin: 0px; font-family: Aptos, Aptos_EmbeddedFont, Aptos_MSFontService, Calibri, Helvetica, sans-serif; font-size: 12pt;">MPICH ERROR [Rank 0] [job id 2109802.0] [Fri Jul 19 15:31:18 2024] [frontier03726] - Abort(59) (rank 0 in comm 0): application called MPI_Abort(MPI_COMM_WORLD, 59) - process 0</div><div style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; font-family: Aptos, Aptos_EmbeddedFont, Aptos_MSFontService, Calibri, Helvetica, sans-serif; font-size: 12pt;"><br>I setup PETSc with gnu compilers like this in Frontier:</div><div style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; line-height: normal; margin: 0px; font-family: Aptos, Aptos_EmbeddedFont, Aptos_MSFontService, Calibri, Helvetica, sans-serif; font-size: 12pt;">./configure COPTFLAGS="-O2" CXXOPTFLAGS="-O2" FOPTFLAGS="-O2" FCOPTFLAGS="-O2" HIPOPTFLAGS="-O2 --offload-arch=gfx90a" --with-debugging=1 --with-cc=cc --with-cxx=CC --with-fc=ftn --with-hip --with-hip-arch=gfx908 --with-hipc=hipcc --LIBS="-L${MPICH_DIR}/lib -lmpi ${CRAY_XPMEM_POST_LINK_OPTS} -lxpmem ${PE_MPICH_GTL_DIR_amd_gfx90a} ${PE_MPICH_GTL_LIBS_amd_gfx90a}" --download-kokkos --download-kokkos-kernels --download-hypre --download-suitesparse --download-cmake --force</div><div style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; font-family: Aptos, Aptos_EmbeddedFont, Aptos_MSFontService, Calibri, Helvetica, sans-serif; font-size: 12pt;"> </div><div style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; font-family: Aptos, Aptos_EmbeddedFont, Aptos_MSFontService, Calibri, Helvetica, sans-serif; font-size: 12pt;">Have you guys come across this before? Thank you for your time,</div><div style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; font-family: Aptos, Aptos_EmbeddedFont, Aptos_MSFontService, Calibri, Helvetica, sans-serif; font-size: 12pt;">Marcos</div><div style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; font-family: Aptos, Aptos_EmbeddedFont, Aptos_MSFontService, Calibri, Helvetica, sans-serif; font-size: 12pt;"><br></div><div id="appendonsend" style="caret-color: rgb(0, 0, 0); font-family: Helvetica; font-size: 18px; font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;"></div><hr tabindex="-1" style="font-family: Helvetica; font-size: 18px; font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; display: inline-block; width: 1120.125px;"><span style="caret-color: rgb(0, 0, 0); font-family: Helvetica; font-size: 18px; font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; float: none; display: inline !important;"></span><div id="divRplyFwdMsg" dir="ltr" style="caret-color: rgb(0, 0, 0); font-family: Helvetica; font-size: 18px; font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;"><font face="Calibri, sans-serif" style="font-size: 11pt;"><b>From:</b><span class="Apple-converted-space"> </span>Vanella, Marcos (Fed) <<a href="mailto:marcos.vanella@nist.gov">marcos.vanella@nist.gov</a>><br><b>Sent:</b><span class="Apple-converted-space"> </span>Friday, July 19, 2024 12:54 PM<br><b>To:</b><span class="Apple-converted-space"> </span>Barry Smith <<a href="mailto:bsmith@petsc.dev">bsmith@petsc.dev</a>><br><b>Cc:</b><span class="Apple-converted-space"> </span><a href="mailto:petsc-users@mcs.anl.gov">petsc-users@mcs.anl.gov</a><span class="Apple-converted-space"> </span><<a href="mailto:petsc-users@mcs.anl.gov">petsc-users@mcs.anl.gov</a>>; Patel, Saumil Sudhir <<a href="mailto:spatel@anl.gov">spatel@anl.gov</a>><br><b>Subject:</b><span class="Apple-converted-space"> </span>Re: [petsc-users] compilation error with latest petsc source</font><div> </div></div><div dir="ltr" style="caret-color: rgb(0, 0, 0); font-family: Helvetica; font-size: 18px; font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;"><div class="x_elementToProof" style="font-family: Aptos, Aptos_EmbeddedFont, Aptos_MSFontService, Calibri, Helvetica, sans-serif; font-size: 12pt;">Thank you Barry! We'll address the change accordingly.</div><div class="x_elementToProof" style="font-family: Aptos, Aptos_EmbeddedFont, Aptos_MSFontService, Calibri, Helvetica, sans-serif; font-size: 12pt;">M</div><div id="x_appendonsend"></div><hr tabindex="-1" style="display: inline-block; width: 1120.125px;"><div id="x_divRplyFwdMsg" dir="ltr"><font face="Calibri, sans-serif" style="font-size: 11pt;"><b>From:</b><span class="Apple-converted-space"> </span>Barry Smith <<a href="mailto:bsmith@petsc.dev">bsmith@petsc.dev</a>><br><b>Sent:</b><span class="Apple-converted-space"> </span>Friday, July 19, 2024 12:42 PM<br><b>To:</b><span class="Apple-converted-space"> </span>Vanella, Marcos (Fed) <<a href="mailto:marcos.vanella@nist.gov">marcos.vanella@nist.gov</a>><br><b>Cc:</b><span class="Apple-converted-space"> </span><a href="mailto:petsc-users@mcs.anl.gov">petsc-users@mcs.anl.gov</a><span class="Apple-converted-space"> </span><<a href="mailto:petsc-users@mcs.anl.gov">petsc-users@mcs.anl.gov</a>><br><b>Subject:</b><span class="Apple-converted-space"> </span>Re: [petsc-users] compilation error with latest petsc source</font><div> </div></div><div style="line-break: after-white-space;"><div><br></div><div> We made some superficial changes to the Fortran API to better support Fortran and its error checking. See the bottom of <a href="https://urldefense.us/v3/__https://petsc.org/main/changes/dev/__;!!G_uCfscf7eWS!eN32mKT-DWEElShhgK8OZIc3vOOsf_Mdz0zToUJkoNBD1nYonVt8s8ERpHIlut7cq7wLaBIV8INywSoFtLbsQb4$" originalsrc="https://petsc.org/main/changes/dev/" shash="j/wF4QvgAQ/OtF/Bt7fA9XpSPmkQAqTVsbCzeZhRsNYym9odHrww7mIjv1dzex396rHhn8b4wqvrw8TLMuWhbTkoUie3kdb3hQey6W+j058HL9wsVqKsF4RMhqQXasY/pbdRkz+J5UV1kmZt/z0fFW9DU040tD+NIbdur/ZBapY=">https://petsc.org/main/changes/dev/<br></a><br></div><div> Basically, you have to respect Fortran's pickiness about passing the correct dimension (or lack of dimension) of arguments. In the error below, you need to pass PETSC_NULL_INTEGER_ARRAY</div><div><br></div><div><span style="font-size: 16px; font-family: "Courier New", monospace;"><br></span></div><div><font face="Courier New, monospace" size="3"><br></font></div><div><font face="Courier New, monospace" size="3"><br id="x_x_lineBreakAtBeginningOfMessage"></font><div><br><blockquote type="cite"><div>On Jul 19, 2024, at 12:20 PM, Vanella, Marcos (Fed) via petsc-users <<a href="mailto:petsc-users@mcs.anl.gov">petsc-users@mcs.anl.gov</a>> wrote:</div><br class="x_x_Apple-interchange-newline"><div><div dir="ltr" id="x_x_pfptBanner0jt9o5d" style="writing-mode: revert !important; color: revert !important; font-family: revert !important; font-feature-settings: revert !important; font-kerning: revert !important; font-size: revert !important; font-size-adjust: revert !important; font-stretch: revert !important; font-style: revert !important; font-variant-alternates: revert !important; font-variant-caps: revert !important; 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font-feature-settings: unset !important; font-kerning: unset !important; font-size: 12px !important; font-size-adjust: unset !important; font-stretch: unset !important; font-style: unset !important; font-variant-alternates: unset !important; font-variant-caps: unset !important; font-variant-east-asian: unset !important; font-variant-ligatures: unset !important; font-variant-numeric: unset !important; font-weight: unset !important; text-orientation: unset !important; zoom: unset !important; letter-spacing: unset !important; align-content: unset !important; align-items: unset !important; align-self: unset !important; background-attachment: unset !important; background-blend-mode: unset !important; background-image: unset !important; background-position: unset !important; background-repeat: unset !important; background-size: unset !important; border-collapse: unset !important; border: unset !important; box-sizing: unset !important; break-after: unset !important; break-before: unset !important; 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position: unset !important; quotes: unset !important; tab-size: unset !important; table-layout: unset !important; text-align: unset !important; text-decoration-color: unset !important; text-decoration: unset !important; text-decoration-style: unset !important; text-emphasis-color: unset !important; text-emphasis-style: unset !important; text-indent: unset !important; text-overflow: unset !important; text-transform: unset !important; text-underline-position: unset !important; vertical-align: unset !important; white-space: unset !important; widows: unset !important; word-break: unset !important; z-index: unset !important; border-spacing: unset !important; word-spacing: unset !important; background-clip: unset !important; background-origin: unset !important; box-shadow: unset !important; text-combine-upright: unset !important;">This message came from outside your organization.</div></div><div style="height: 0px; clear: both !important; display: block !important; visibility: hidden !important; line-height: 0 !important; font-size: 0.01px !important;"></div></div><div class="x_x_elementToProof" style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; text-decoration: none; font-family: Aptos, Aptos_EmbeddedFont, Aptos_MSFontService, Calibri, Helvetica, sans-serif; font-size: 12pt;">Hi, I did an update and compiled PETSc in Frontier with gnu compilers. When compiling my code with PETSc I see this new error pop up:</div><div class="x_x_elementToProof" style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; text-decoration: none; font-family: Aptos, Aptos_EmbeddedFont, Aptos_MSFontService, Calibri, Helvetica, sans-serif; font-size: 12pt;"><br></div><div class="x_x_elementToProof" style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; text-decoration: none; font-family: "Courier New", monospace; font-size: 12pt;">Building mpich_gnu_frontier</div><div style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; text-decoration: none; font-family: "Courier New", monospace; font-size: 12pt;">ftn -c -m64 -O2 -g -std=f2018 -frecursive -ffpe-summary=none -fall-intrinsics -cpp -DGITHASH_PP=\"FDS-6.9.1-894-g0b77ae0-FireX\" -DGITDATE_PP=\""Thu Jul 11 16:05:44 2024 -0400\"" -DBUILDDATE_PP=\""Jul 19, 2024 12:13:39\"" -DWITH_PETSC -I"/autofs/nccs-svm1_home1/vanellam/Software/petsc/include/" -I"/autofs/nccs-svm1_home1/vanellam/Software/petsc/arch-linux-frontier-opt-gcc2/include" -fopenmp ../../Source/pres.f90</div><div style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; text-decoration: none; font-family: "Courier New", monospace; font-size: 12pt;">../../Source/pres.f90:2799:65:</div><div style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; text-decoration: none; font-family: "Courier New", monospace; font-size: 12pt;"><br></div><div style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; text-decoration: none; font-family: "Courier New", monospace; font-size: 12pt;"> 2799 | CALL MATCREATESEQAIJ(PETSC_COMM_SELF,ZM%NUNKH,ZM%NUNKH,NNZ_7PT_H,PETSC_NULL_INTEGER,ZM%PETSC_MZ%A_H,PETSC_IERR)</div><div style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; text-decoration: none; font-family: "Courier New", monospace; font-size: 12pt;"> | 1</div><div style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; text-decoration: none; font-family: "Courier New", monospace; font-size: 12pt;">Error: Rank mismatch in argument ‘e’ at (1) (rank-1 and scalar)</div><div style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; text-decoration: none; font-family: "Courier New", monospace; font-size: 12pt;"><br></div><div style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; text-decoration: none; font-family: Aptos, Aptos_EmbeddedFont, Aptos_MSFontService, Calibri, Helvetica, sans-serif; font-size: 12pt;">It seems the use of PETSC_NULL_INTEGER is causing an issue now. From the PETSc docs this entry is nnz which can be an array or NULL. Has there been any change on the API for this routine? </div><div style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; text-decoration: none; font-family: Aptos, Aptos_EmbeddedFont, Aptos_MSFontService, Calibri, Helvetica, sans-serif; font-size: 12pt;"><br></div><div style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; text-decoration: none; font-family: Aptos, Aptos_EmbeddedFont, Aptos_MSFontService, Calibri, Helvetica, sans-serif; font-size: 12pt;">Thanks,</div><div style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; text-decoration: none; font-family: Aptos, Aptos_EmbeddedFont, Aptos_MSFontService, Calibri, Helvetica, sans-serif; font-size: 12pt;">Marcos</div><div style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; text-decoration: none; font-family: Aptos, Aptos_EmbeddedFont, Aptos_MSFontService, Calibri, Helvetica, sans-serif; font-size: 12pt;"><br></div><div style="font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; text-decoration: none; font-family: Aptos, Aptos_EmbeddedFont, Aptos_MSFontService, Calibri, Helvetica, sans-serif; font-size: 12pt;">PS: I see some other erros in calls to PETSc routines, same type.</div></div></blockquote></div></div></div></div></div></blockquote></div><br></div></body></html>