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When I attempt to read the "np_2" data into Matlab (the reading process doesn't use any PETSc code) I get the same failure. It does look like the file is corrupted. Barry On Jun 6, 2024, at 8: 52 AM, Klaij, Christiaan <C. Klaij@ marin. nl>
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<meta http-equiv="content-type" content="text/html; charset=utf-8"></head><body style="overflow-wrap: break-word; -webkit-nbsp-mode: space; line-break: after-white-space;"><div><br></div> When I attempt to read the "np_2" data into Matlab (the reading process doesn't use any PETSc code) I get the same failure. It does look like the file is corrupted.<div><br></div><div> Barry</div><div><br id="lineBreakAtBeginningOfMessage"><div><br><blockquote type="cite"><div>On Jun 6, 2024, at 8:52 AM, Klaij, Christiaan <C.Klaij@marin.nl> wrote:</div><br class="Apple-interchange-newline"><div><meta charset="UTF-8"><div dir="ltr" id="pfptBanner3qsbpc4" style="color-scheme: revert !important; writing-mode: revert !important; -webkit-ruby-position: revert !important; color: revert !important; font-family: revert !important; font-feature-settings: revert !important; font-kerning: revert !important; font-optical-sizing: revert !important; font-palette: revert !important; font-size: revert !important; font-size-adjust: revert !important; font-stretch: revert !important; font-style: revert !important; font-synthesis-small-caps: revert !important; font-synthesis-style: revert !important; font-synthesis-weight: revert !important; font-variant-alternates: revert !important; font-variant-caps: revert !important; font-variant-east-asian: revert !important; 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display: block !important; visibility: hidden !important; line-height: 0 !important; font-size: 0.01px !important;"></div></div><div style="caret-color: rgb(0, 0, 0); font-family: Helvetica; font-size: 18px; font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;">I'm writing a matrix to file from my fortran code (that uses petsc-3.19.4) with -mat_view binary. Then, I'm trying to load this mat into python (that uses petsc-3.21.0). This works fine using single or multiple procs when the marix was written using a single proc (attached file a_mat_np_1.dat). However, when the matrix was written using mulitple procs (attached file a_mat_n_2.dat) I get the error below. Is this supposed to work? If so, what I'm I doing wrong?<br><br>$ cat test_matrixImport_binary.py<br>import sys<br>import petsc4py<br>from petsc4py import PETSc<br>from mpi4py import MPI<br><br># mat files<br>#filename = "./a_mat_np_1.dat" # Works<br>filename = "./a_mat_np_2.dat" # Doesn't work<br><br># Initialize PETSc<br>petsc4py.init(sys.argv)<br><br># Create a viewer for reading the binary file<br>viewer = PETSc.Viewer().createBinary(filename, mode='r', comm=PETSc.COMM_WORLD)<br><br># Create a matrix and load data from the binary file<br>A = PETSc.Mat().create(comm=PETSc.COMM_WORLD)<br>A.load(viewer)<br><br>$ python test_matrixImport_binary.py<span class="Apple-converted-space"> </span><br>Traceback (most recent call last):<br>File "/projects/P35662.700/test_cklaij/test_matrixImport_binary.py", line 18, in <module><br>A.load(viewer)<br>File "petsc4py/PETSc/Mat.pyx", line 2025, in petsc4py.PETSc.Mat.load<br>petsc4py.PETSc.Error: error code 79<br>[0] MatLoad() at /home/cklaij/petsc-3.21.0/src/mat/interface/matrix.c:1344<br>[0] MatLoad_SeqAIJ() at /home/cklaij/petsc-3.21.0/src/mat/impls/aij/seq/aij.c:5091<br>[0] MatLoad_SeqAIJ_Binary() at /home/cklaij/petsc-3.21.0/src/mat/impls/aij/seq/aij.c:5142<br>[0] Unexpected data in file<br>[0] Inconsistent matrix data in file: nonzeros = 460, sum-row-lengths = 761<br><br>$ mpirun -n 2 python test_matrixImport_binary.py<span class="Apple-converted-space"> </span><br>Traceback (most recent call last):<br>File "/projects/P35662.700/test_cklaij/test_matrixImport_binary.py", line 18, in <module><br>Traceback (most recent call last):<br>File "/projects/P35662.700/test_cklaij/test_matrixImport_binary.py", line 18, in <module><br>A.load(viewer)<br>File "petsc4py/PETSc/Mat.pyx", line 2025, in petsc4py.PETSc.Mat.load<br>A.load(viewer)<br>File "petsc4py/PETSc/Mat.pyx", line 2025, in petsc4py.PETSc.Mat.load<br>petsc4py.PETSc.Error: error code 79<br>[0] MatLoad() at /home/cklaij/petsc-3.21.0/src/mat/interface/matrix.c:1344<br>[0] MatLoad_MPIAIJ() at /home/cklaij/petsc-3.21.0/src/mat/impls/aij/mpi/mpiaij.c:3035<br>[0] MatLoad_MPIAIJ_Binary() at /home/cklaij/petsc-3.21.0/src/mat/impls/aij/mpi/mpiaij.c:3087<br>[0] Unexpected data in file<br>[0] Inconsistent matrix data in file: nonzeros = 460, sum-row-lengths = 761<br>petsc4py.PETSc.Error: error code 79<br>[1] MatLoad() at /home/cklaij/petsc-3.21.0/src/mat/interface/matrix.c:1344<br>[1] MatLoad_MPIAIJ() at /home/cklaij/petsc-3.21.0/src/mat/impls/aij/mpi/mpiaij.c:3035<br>[1] MatLoad_MPIAIJ_Binary() at /home/cklaij/petsc-3.21.0/src/mat/impls/aij/mpi/mpiaij.c:3087<br>[1] Unexpected data in file<br>[1] Inconsistent matrix data in file: nonzeros = 460, sum-row-lengths = 761<br><br><br></div><div dir="ltr" style="caret-color: rgb(0, 0, 0); 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