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 When I attempt to read the "np_2" data into Matlab (the reading process doesn't use any PETSc code) I get the same failure. It does look like the file is corrupted. Barry On Jun 6, 2024, at 8: 52 AM, Klaij, Christiaan <C. Klaij@ marin. nl>
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<meta http-equiv="content-type" content="text/html; charset=utf-8"></head><body style="overflow-wrap: break-word; -webkit-nbsp-mode: space; line-break: after-white-space;"><div><br></div>  When I attempt to read the "np_2" data into Matlab (the reading process doesn't use any PETSc code) I get the same failure. It does look like the file is corrupted.<div><br></div><div>  Barry</div><div><br id="lineBreakAtBeginningOfMessage"><div><br><blockquote type="cite"><div>On Jun 6, 2024, at 8:52 AM, Klaij, Christiaan <C.Klaij@marin.nl> wrote:</div><br class="Apple-interchange-newline"><div><meta charset="UTF-8"><div dir="ltr" id="pfptBanner3qsbpc4" style="color-scheme: revert !important; writing-mode: revert !important; -webkit-ruby-position: revert !important; color: revert !important; font-family: revert !important; font-feature-settings: revert !important; font-kerning: revert !important; font-optical-sizing: revert !important; font-palette: revert !important; font-size: revert !important; font-size-adjust: revert !important; font-stretch: revert !important; font-style: revert !important; font-synthesis-small-caps: revert !important; font-synthesis-style: revert !important; font-synthesis-weight: revert !important; font-variant-alternates: revert !important; font-variant-caps: revert !important; font-variant-east-asian: revert !important; font-variant-emoji: revert !important; font-variant-ligatures: revert !important; font-variant-numeric: revert !important; font-variant-position: revert !important; font-variation-settings: revert !important; font-weight: revert !important; text-orientation: revert !important; text-rendering: revert !important; zoom: revert !important; -webkit-font-smoothing: revert !important; -webkit-locale: revert !important; -webkit-text-size-adjust: revert !important; -webkit-text-zoom: revert !important; letter-spacing: revert !important; text-autospace: revert !important; text-spacing-trim: revert !important; accent-color: revert !important; align-content: revert !important; align-items: revert !important; align-self: revert !important; alignment-baseline: revert !important; alt: revert !important; animation-composition: revert !important; animation: revert !important; animation-timeline: revert !important; appearance: revert !important; aspect-ratio: revert !important; backface-visibility: revert !important; background-attachment: revert !important; background-blend-mode: revert !important; background-image: revert !important; background-position: revert !important; background-repeat: revert !important; background-size: revert !important; baseline-shift: revert !important; block-step-insert: revert !important; block-step-size: revert !important; border-collapse: revert !important; border-image: revert !important; box-sizing: revert !important; break-after: revert !important; break-before: revert !important; break-inside: revert !important; buffered-rendering: revert !important; caption-side: revert !important; caret-color: revert !important; clear: revert !important; clip: revert !important; clip-path: revert !important; clip-rule: revert !important; color-interpolation: revert !important; color-interpolation-filters: revert !important; column-count: revert !important; column-fill: revert !important; column-gap: revert !important; column-rule-color: revert !important; column-rule-style: revert !important; column-rule-width: revert !important; column-span: revert !important; column-width: revert !important; contain: revert !important; container-name: revert !important; container-type: revert !important; content: revert !important; content-visibility: revert !important; counter-increment: revert !important; counter-reset: revert !important; counter-set: revert !important; cursor: revert !important; cx: revert !important; cy: revert !important; dominant-baseline: revert !important; empty-cells: revert !important; fill: revert !important; fill-opacity: revert !important; fill-rule: revert !important; filter: revert !important; flex: revert !important; flex-flow: revert !important; float: revert !important; flood-color: revert !important; flood-opacity: revert !important; glyph-orientation-horizontal: revert !important; glyph-orientation-vertical: revert !important; grid: revert !important; grid-column-end: revert !important; grid-column-start: revert !important; grid-row-end: revert !important; grid-row-start: revert !important; hanging-punctuation: revert !important; hyphenate-character: revert !important; hyphens: revert !important; image-orientation: revert !important; image-rendering: revert !important; input-security: revert !important; isolation: revert !important; justify-content: revert !important; justify-items: revert !important; justify-self: revert !important; kerning: revert !important; lighting-color: revert !important; line-break: revert !important; line-height: revert !important; list-style: revert !important; margin-trim: revert !important; marker: revert !important; mask: r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from outside your organization.</div></div><div style="height: 0px; clear: both !important; display: block !important; visibility: hidden !important; line-height: 0 !important; font-size: 0.01px !important;"></div></div><div style="caret-color: rgb(0, 0, 0); font-family: Helvetica; font-size: 18px; font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;">I'm writing a matrix to file from my fortran code (that uses petsc-3.19.4) with -mat_view binary. Then, I'm trying to load this mat into python (that uses petsc-3.21.0). This works fine using single or multiple procs when the marix was written using a single proc (attached file a_mat_np_1.dat). However, when the matrix was written using mulitple procs (attached file a_mat_n_2.dat) I get the error below. Is this supposed to work? If so, what I'm I doing wrong?<br><br>$ cat test_matrixImport_binary.py<br>import sys<br>import petsc4py<br>from petsc4py import PETSc<br>from mpi4py import MPI<br><br># mat files<br>#filename = "./a_mat_np_1.dat" # Works<br>filename = "./a_mat_np_2.dat" # Doesn't work<br><br># Initialize PETSc<br>petsc4py.init(sys.argv)<br><br># Create a viewer for reading the binary file<br>viewer = PETSc.Viewer().createBinary(filename, mode='r', comm=PETSc.COMM_WORLD)<br><br># Create a matrix and load data from the binary file<br>A = PETSc.Mat().create(comm=PETSc.COMM_WORLD)<br>A.load(viewer)<br><br>$ python test_matrixImport_binary.py<span class="Apple-converted-space"> </span><br>Traceback (most recent call last):<br>File "/projects/P35662.700/test_cklaij/test_matrixImport_binary.py", line 18, in <module><br>A.load(viewer)<br>File "petsc4py/PETSc/Mat.pyx", line 2025, in petsc4py.PETSc.Mat.load<br>petsc4py.PETSc.Error: error code 79<br>[0] MatLoad() at /home/cklaij/petsc-3.21.0/src/mat/interface/matrix.c:1344<br>[0] MatLoad_SeqAIJ() at /home/cklaij/petsc-3.21.0/src/mat/impls/aij/seq/aij.c:5091<br>[0] MatLoad_SeqAIJ_Binary() at /home/cklaij/petsc-3.21.0/src/mat/impls/aij/seq/aij.c:5142<br>[0] Unexpected data in file<br>[0] Inconsistent matrix data in file: nonzeros = 460, sum-row-lengths = 761<br><br>$ mpirun -n 2 python test_matrixImport_binary.py<span class="Apple-converted-space"> </span><br>Traceback (most recent call last):<br>File "/projects/P35662.700/test_cklaij/test_matrixImport_binary.py", line 18, in <module><br>Traceback (most recent call last):<br>File "/projects/P35662.700/test_cklaij/test_matrixImport_binary.py", line 18, in <module><br>A.load(viewer)<br>File "petsc4py/PETSc/Mat.pyx", line 2025, in petsc4py.PETSc.Mat.load<br>A.load(viewer)<br>File "petsc4py/PETSc/Mat.pyx", line 2025, in petsc4py.PETSc.Mat.load<br>petsc4py.PETSc.Error: error code 79<br>[0] MatLoad() at /home/cklaij/petsc-3.21.0/src/mat/interface/matrix.c:1344<br>[0] MatLoad_MPIAIJ() at /home/cklaij/petsc-3.21.0/src/mat/impls/aij/mpi/mpiaij.c:3035<br>[0] MatLoad_MPIAIJ_Binary() at /home/cklaij/petsc-3.21.0/src/mat/impls/aij/mpi/mpiaij.c:3087<br>[0] Unexpected data in file<br>[0] Inconsistent matrix data in file: nonzeros = 460, sum-row-lengths = 761<br>petsc4py.PETSc.Error: error code 79<br>[1] MatLoad() at /home/cklaij/petsc-3.21.0/src/mat/interface/matrix.c:1344<br>[1] MatLoad_MPIAIJ() at /home/cklaij/petsc-3.21.0/src/mat/impls/aij/mpi/mpiaij.c:3035<br>[1] MatLoad_MPIAIJ_Binary() at /home/cklaij/petsc-3.21.0/src/mat/impls/aij/mpi/mpiaij.c:3087<br>[1] Unexpected data in file<br>[1] Inconsistent matrix data in file: nonzeros = 460, sum-row-lengths = 761<br><br><br></div><div dir="ltr" style="caret-color: rgb(0, 0, 0); font-family: Helvetica; font-style: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; font-size: 1px; direction: ltr;"><table cellpadding="0" cellspacing="0" border="0" style="width: 1358px; border-collapse: collapse; font-size: 1px;"><tbody><tr style="font-size: 0px;"><td align="left" style="vertical-align: top;"><table cellpadding="0" cellspacing="0" border="0" style="border-collapse: collapse; font-size: 0px; line-height: normal;"><tbody><tr style="font-size: 0px;"><td align="left" style="padding: 10px 0px; vertical-align: top;"><span id="cid:image337700.png@6322CF75.C08964A2"><image337700.png></span></td></tr></tbody></table></td></tr><tr style="font-size: 0px;"><td align="left" style="vertical-align: top;"><table cellpadding="0" cellspacing="0" border="0" style="border-collapse: collapse; font-size: 0px;"><tbody><tr style="font-size: 0px;"><td align="left" style="vertical-align: top;"><table cellpadding="0" cellspacing="0" border="0" style="border-collapse: collapse; font-size: 0px; color: rgb(0, 0, 1); font-style: normal; font-weight: 400; white-space: nowrap;"><tbody><tr style="font-si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