[0]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [0]PETSC ERROR: It appears a new error in the code was triggered after a previous error, possibly because: [0]PETSC ERROR: - The first error was not properly handled via (for example) the use of [0]PETSC ERROR: PetscCall(TheFunctionThatErrors()); or [0]PETSC ERROR: - The second error was triggered while handling the first error. [0]PETSC ERROR: Above is the traceback for the previous unhandled error, below the traceback for the next error [0]PETSC ERROR: ALL ERRORS in the PETSc libraries are fatal, you should add the appropriate error checking to the code [0]PETSC ERROR: Invalid argument [0]PETSC ERROR: Wrong type of object: Parameter # 1 [0]PETSC ERROR: See https://petsc.org/release/faq/ for trouble shooting. [0]PETSC ERROR: Petsc Release Version 3.20.0, Sep 28, 2023 [0]PETSC ERROR: /weka/data/lab/richey/sawsan/GW_CODE/code2024/SawSim_Newton/./GW.exe on a named login-p2n02.kamiak.wsu.edu by sawsan.shatanawi Fri May 10 15:15:41 2024 [0]PETSC ERROR: Configure options --prefix=/opt/apps/petsc/3.20.0/intel/20.2/mpich/3.3.2 --with-blaslapack-dir=/opt/apps/intel/20.2/compilers_and_libraries_2020.2.254/linux/mkl --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 [0]PETSC ERROR: #1 MatAssemblyEnd() at /weka/data/kamiak/rohit.dhariwal/software_installs/petsc/3.20.0/petsc-3.20.0/src/mat/interface/matrix.c:5754 Program received signal SIGSEGV, Segmentation fault. 0x00002aaaaaf3f028 in PetscCheckPointer (ptr=0x40ec8148e5894855, dtype=PETSC_CHAR) at /weka/data/kamiak/rohit.dhariwal/software_installs/petsc/3.20.0/petsc-3.20.0/src/sys/error/checkptr.c:122 122 /weka/data/kamiak/rohit.dhariwal/software_installs/petsc/3.20.0/petsc-3.20.0/src/sys/error/checkptr.c: No such file or directory. Missing separate debuginfos, use: debuginfo-install bzip2-libs-1.0.6-13.el7.x86_64 elfutils-libs-0.168-8.el7.x86_64 glibc-2.17-196.el7_4.2.x86_64 libX11-1.6.5-1.el7.x86_64 libXau-1.0.8-2.1.el7.x86_64 libattr-2.4.46-12.el7.x86_64 libcap-2.22-9.el7.x86_64 libxcb-1.12-1.el7.x86_64 libxml2-2.9.1-6.el7_2.3.x86_64 systemd-libs-219-42.el7_4.4.x86_64 xz-libs-5.2.2-1.el7.x86_64 zlib-1.2.7-20.el7_9.x86_64 (gdb) tb Temporary breakpoint 1 at 0x2aaaaaf3f028: file /weka/data/kamiak/rohit.dhariwal/software_installs/petsc/3.20.0/petsc-3.20.0/src/sys/error/checkptr.c, line 122. (gdb) bt #0 0x00002aaaaaf3f028 in PetscCheckPointer (ptr=0x40ec8148e5894855, dtype=PETSC_CHAR) at /weka/data/kamiak/rohit.dhariwal/software_installs/petsc/3.20.0/petsc-3.20.0/src/sys/error/checkptr.c:122 #1 0x00002aaaab65a28b in PetscContainerSetPointer (obj=0xe1f160, ptr=0x40ec8148e5894855) at /weka/data/kamiak/rohit.dhariwal/software_installs/petsc/3.20.0/petsc-3.20.0/src/sys/objects/inherit.c:888 #2 0x00002aaaaf64fe4f in DMSNESSetJacobian (dm=0xe06c90, J=0x2aaaaf7362ac , ctx=0x40ec8148e5894855) at /weka/data/kamiak/rohit.dhariwal/software_installs/petsc/3.20.0/petsc-3.20.0/src/snes/utils/dmsnes.c:585 #3 0x00002aaaaf6c942d in SNESSetJacobian (snes=0xdc8970, Amat=0xd39180, Pmat=0xd39180, J=0x2aaaaf7362ac , ctx=0x40ec8148e5894855) at /weka/data/kamiak/rohit.dhariwal/software_installs/petsc/3.20.0/petsc-3.20.0/src/snes/interface/snes.c:3013 #4 0x00002aaaaf77c972 in snessetjacobian_ (snes=0x7fffffffa198, A=0x7fffffffa190, B=0x7fffffffa190, func=0x2aaaaf77c6c3 , ctx=0x421b98 , ierr=0x7fffffffa0d0) at /weka/data/kamiak/rohit.dhariwal/software_installs/petsc/3.20.0/petsc-3.20.0/src/snes/interface/ftn-custom/zsnesf.c:230 #5 0x000000000042739c in gw_solver (t_s=1, n=100) at GW_solver.F90:143 #6 0x000000000042acd9 in test_gw () at GW_main_test.F90:53 #7 0x0000000000406912 in main () #8 0x00002aaab1c26c05 in __libc_start_main () from /lib64/libc.so.6 #9 0x0000000000406829 in _start () (gdb) q A debugging session is active. Inferior 1 [process 28961] will be killed. Quit anyway? (y or n) y srun: job 57220679 queued and waiting for resources srun: job 57220679 has been allocated resources PETSC: Attaching gdb to /weka/data/lab/richey/sawsan/GW_CODE/code2024/SawSim_Newton/./GW.exe of pid 24608 on display :0.0 on machine cn144 Unable to start debugger in xterm: No such file or directory [0]PETSC ERROR: PetscAbortErrorHandler: MatSetValues() at /weka/data/kamiak/rohit.dhariwal/software_installs/petsc/3.20.0/petsc-3.20.0/src/mat/interface/matrix.c:1470 Null Pointer: Parameter # 1 To prevent termination, change the error handler using PetscPushErrorHandler() forrtl: error (76): Abort trap signal Image PC Routine Line Source libpetsc.so.3.20. 00002B6E18C5742C for__signal_handl Unknown Unknown libpthread-2.17.s 00002B6E1A2E35E0 Unknown Unknown Unknown libc-2.17.so 00002B6E1A5251F7 gsignal Unknown Unknown libc-2.17.so 00002B6E1A5268E8 abort Unknown Unknown libpetsc.so.3.20. 00002B6E13841659 Unknown Unknown Unknown libpetsc.so.3.20. 00002B6E1382E209 PetscError Unknown Unknown libpetsc.so.3.20. 00002B6E14AB94EE MatSetValues Unknown Unknown libpetsc.so.3.20. 00002B6E15B5EC2D matsetvalue_ Unknown Unknown GW.exe 0000000000423C52 Unknown Unknown Unknown GW.exe 00000000004272DF Unknown Unknown Unknown GW.exe 000000000042ACD9 Unknown Unknown Unknown GW.exe 0000000000406912 Unknown Unknown Unknown libc-2.17.so 00002B6E1A511C05 __libc_start_main Unknown Unknown